# terms

id: GO:0003060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which acetylcholine released from vagus nerve endings binds to muscarinic receptors and decreases the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of the force of heart contraction by chemical signal","termid":"GO:0003108"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by acetylcholine","termid":"GO:0003068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of the force of heart contraction by acetylcholine","synonyms":[{"name":"decreased force of heart contraction by acetylcholine","type":"exact"}],"termid":"GO:0003060"}


id: PBO:0084047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating factor for Rsr1p/Bud1p; plays a role in spindle position checkpoint distinct from its role in bud site selection; required for both axial and bipolar budding patterns; mutants exhibit random budding in all cell types; contains two PH-like domains","termid":"PBO:0084047"}


id: GO:0031666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of lipopolysaccharide-mediated signaling pathway","termid":"GO:0031664"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"positively_regulates","term_name":"lipopolysaccharide-mediated signaling pathway","termid":"GO:0031663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"activation of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of LPS-mediated signaling pathway","type":"exact"},{"name":"positive regulation of lipopolysaccharide-mediated signalling pathway","type":"exact"},{"name":"stimulation of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"up regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"up-regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"upregulation of lipopolysaccharide-mediated signaling pathway","type":"exact"}],"termid":"GO:0031666"}


id: PBO:0065145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protamine 1","termid":"PBO:0065145"}


id: PBO:0071074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 76","termid":"PBO:0071074"}


id: GO:0060071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of non-canonical Wnt signaling pathway in which Wnt binding to its receptor on the surface of a target cell results in the activation small G proteins such as Rho, Rac, and Cdc42 which, in turn activate effectors, including C-Jun N-terminal kinase (JNK) and Rho kinase (Rok). The signaling ends with change in the transcription of target genes and/or reorganisation of the cytoskeleton.","definition_xrefs":["PMID:37804416","PMID:28293032","PMID:11532397","PMID:25349257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Wnt signaling pathway, planar cell polarity pathway","synonyms":[{"name":"PCP pathway","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"Wnt-JNK signaling pathway","type":"related"},{"name":"Wnt-PCP signaling pathway","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"non-canonical Wnt signaling pathway","type":"related"},{"name":"planar cell polarity pathway","type":"exact"}],"termid":"GO:0060071"}


id: GO:0003016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.","definition_xrefs":["GOC:mtg_cardio","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"},{"relation_name":"part_of","term_name":"respiratory gaseous exchange by respiratory system","termid":"GO:0007585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory system process","secondary_identifiers":["GO:0010802"],"synonyms":[{"name":"respiratory gaseous exchange","type":"exact"}],"termid":"GO:0003016"}


id: GO:1902724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of skeletal muscle satellite cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23212449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle satellite cell proliferation","termid":"GO:0014842"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle cell proliferation","termid":"GO:0014858"},{"relation_name":"positively_regulates","term_name":"skeletal muscle satellite cell proliferation","termid":"GO:0014841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle satellite cell proliferation","synonyms":[{"name":"activation of satellite cell proliferation","type":"narrow"},{"name":"up regulation of satellite cell proliferation","type":"exact"},{"name":"up-regulation of satellite cell proliferation","type":"exact"},{"name":"upregulation of satellite cell proliferation","type":"exact"}],"termid":"GO:1902724"}


id: GO:0103069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 17alpha-hydroxyprogesterone + O2 + reduced [NADPH--hemoprotein reductase] = 11-deoxycortisol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:50308","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 21-monooxygenase activity","termid":"GO:0004509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"17-hydroxyprogesterone 21-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN66-356"],"termid":"GO:0103069"}


id: PBO:0039407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 10 pseudogene 1","termid":"PBO:0039407"}


id: FYPO:0002379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with abnormal germ tube morphology","termid":"FYPO:0000313"},{"relation_name":"is_a","term_name":"inviable after spore germination with elongated germ tube","termid":"FYPO:0000314"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated germ tube","synonyms":[{"name":"inviable germinated spore, without cell division, with elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated germ tube","type":"exact"}],"termid":"FYPO:0002379"}


id: GO:0015435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ABC-type efflux permease activity (obsolete GO:0015435)","synonyms":[{"name":"ABC-type efflux permease activity","type":"exact"}],"termid":"GO:0015435"}


id: FYPO:0007920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which alternative polyadenylation of ncRNA is decreased. ncRNA alternative polyadenylation generates RNA molecules with variable 3'-end lengths from a given RNA by differential use of cleavage and polyadenylation signals. Includes differences in the relative usage levels of alternative polyadenylation sites.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA alternative polyadenylation","termid":"FYPO:0007919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased ncRNA alternative polyadenylation","termid":"FYPO:0007920"}


id: PBO:0083092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor required for activating GAL genes; responds to galactose; repressed by Gal80p and activated by Gal3p","termid":"PBO:0083092"}


id: PBO:0091492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Muskelin homolog, kelch repeat, expressed during meiotic cell cycle, implicated in cytoskeletal processes","termid":"PBO:0091492"}


id: PBO:0000736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin family","termid":"PBO:0000736"}


id: GO:0006579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any betaine, the N-trimethyl derivative of an amino acid.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino-acid betaine catabolic process","synonyms":[{"name":"betaine breakdown","type":"exact"},{"name":"betaine catabolic process","type":"exact"},{"name":"betaine catabolism","type":"exact"},{"name":"betaine degradation","type":"exact"}],"termid":"GO:0006579"}


id: PBO:0079529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-yW synthesizing protein 3 homolog","termid":"PBO:0079529"}


id: PBO:0017868
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lissencephaly","termid":"PBO:0017868"}


id: GO:0002940
data:
  {"annotated_genes":["SJAG_04181","SJAG_00886"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100252,103395],"is_not":false,"summary":null,"term":"GO:0002940"}]},"cv_name":"biological_process","definition":"The process whereby a guanine in a tRNA is methylated at the N2 position of guanine.","definition_xrefs":["ISBN:155581073X","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00886":null,"SJAG_04181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA N2-guanine methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA m2-guanine biosynthesis","type":"related"}],"termid":"GO:0002940","terms_by_termid":{"GO:0002940":null}}


id: PBO:0046899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 21 member F, pseudogene","termid":"PBO:0046899"}


id: PBO:0040092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase L","termid":"PBO:0040092"}


id: PBO:0005274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw1 (predicted)","termid":"PBO:0005274"}


id: PR:C6Y4C0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC222.18 gene.","definition_xrefs":["UniProtKB:C6Y4C0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor C222.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.18","synonyms":[{"name":"Spom972h-SPAC222.18","type":"exact"}],"termid":"PR:C6Y4C0"}


id: PBO:0046204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B pseudogene 1","termid":"PBO:0046204"}


id: SO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pyrimidine rich sequence near the 3' end of an intron to which the 5'end becomes covalently bound during nuclear splicing. The resulting structure resembles a lariat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branch_site","synonyms":[{"name":"branch point","type":"exact"},{"name":"branch site","type":"exact"},{"name":"branch_point","type":"exact"}],"termid":"SO:0000611"}


id: PBO:0064659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4A","termid":"PBO:0064659"}


id: PBO:0052723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 15","termid":"PBO:0052723"}


id: PBO:0064449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocalyxin like","termid":"PBO:0064449"}


id: PBO:0055691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liver cell viability associated lncRNA","termid":"PBO:0055691"}


id: PBO:0034639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K16_acetylation_at_telomere","termid":"PBO:0034639"}


id: GO:0061832
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Testis-specific junction between mature Sertoli cells involved in establishing the blood-testis barrier of the Sertoli cell.","definition_xrefs":["GOC:dph","GOC:aruk","GOC:bc","PMID:23546604","PMID:22332112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal ectoplasmic specialization","synonyms":[{"name":"basal ES","type":"exact"}],"termid":"GO:0061832"}


id: GO:0052615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-kaur-16-ene + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = ent-kaur-16-en-19-oate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:32323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ent-kaurene oxidase activity","secondary_identifiers":["MetaCyc:1.14.13.78-RXN","EC:1.14.14.86"],"termid":"GO:0052615"}


id: PBO:0041218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1","termid":"PBO:0041218"}


id: SO:0000849
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A component of the three-prime long terminal repeat.","definition_xrefs":["PMID:8649407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_component","termid":"SO:0000848"},{"relation_name":"part_of","term_name":"three_prime_LTR","termid":"SO:0000426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_LTR_component","synonyms":[{"name":"3' long terminal repeat component","type":"exact"},{"name":"three prime LTR component","type":"exact"}],"termid":"SO:0000849"}


id: GO:1903529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dCDP biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16317005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of pyrimidine nucleotide biosynthetic process","termid":"GO:1900398"},{"relation_name":"is_a","term_name":"regulation of dCDP biosynthetic process","termid":"GO:1903528"},{"relation_name":"negatively_regulates","term_name":"dCDP biosynthetic process","termid":"GO:0006240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"negative regulation of dCDP biosynthetic process","synonyms":[{"name":"down regulation of dCDP anabolism","type":"exact"},{"name":"down regulation of dCDP biosynthesis","type":"exact"},{"name":"down regulation of dCDP biosynthetic process","type":"exact"},{"name":"down regulation of dCDP formation","type":"exact"},{"name":"down regulation of dCDP synthesis","type":"exact"},{"name":"down-regulation of dCDP anabolism","type":"exact"},{"name":"down-regulation of dCDP biosynthesis","type":"exact"},{"name":"down-regulation of dCDP biosynthetic process","type":"exact"},{"name":"down-regulation of dCDP formation","type":"exact"},{"name":"down-regulation of dCDP synthesis","type":"exact"},{"name":"downregulation of dCDP anabolism","type":"exact"},{"name":"downregulation of dCDP biosynthesis","type":"exact"},{"name":"downregulation of dCDP biosynthetic process","type":"exact"},{"name":"downregulation of dCDP formation","type":"exact"},{"name":"downregulation of dCDP synthesis","type":"exact"},{"name":"inhibition of dCDP anabolism","type":"narrow"},{"name":"inhibition of dCDP biosynthesis","type":"narrow"},{"name":"inhibition of dCDP biosynthetic process","type":"narrow"},{"name":"inhibition of dCDP formation","type":"narrow"},{"name":"inhibition of dCDP synthesis","type":"narrow"},{"name":"negative regulation of dCDP anabolism","type":"exact"},{"name":"negative regulation of dCDP biosynthesis","type":"exact"},{"name":"negative regulation of dCDP formation","type":"exact"},{"name":"negative regulation of dCDP synthesis","type":"exact"}],"termid":"GO:1903529"}


id: PBO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type proton ATPase, P3-type Pma1","termid":"PBO:0002263"}


id: GO:0019827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which an organism or tissue maintains a population of stem cells of a single type. This can be achieved by a number of mechanisms: stem cell asymmetric division maintains stem cell numbers; stem cell symmetric division increases them; maintenance of a stem cell niche maintains the conditions for commitment to the stem cell fate for some types of stem cell; stem cells may arise de novo from other cell types.","definition_xrefs":["GOC:mah","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"maintenance of cell number","termid":"GO:0098727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell population maintenance","synonyms":[{"name":"maintenance of pluripotency","type":"related"}],"termid":"GO:0019827"}


id: PBO:0044496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle regulator of NHEJ","termid":"PBO:0044496"}


id: PBO:0060636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-compact myelin associated protein","termid":"PBO:0060636"}


id: MOD:01110
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an L-cysteine residue with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoprenylated cysteine","synonyms":[{"name":"IpCys","type":"exact"}],"termid":"MOD:01110"}


id: PBO:0042826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 5A","termid":"PBO:0042826"}


id: PBO:0059410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS35 divergent transcript","termid":"PBO:0059410"}


id: FYPO:0003162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect during a cellular response to salt stress. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to salt stress","termid":"FYPO:0002304"},{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to salt stress","synonyms":[{"name":"RNA absent from cell during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"transcripts absent from cell during cellular response to salt stress","type":"exact"},{"name":"undetectable RNA level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003162"}


id: PBO:0034479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_synthase_(NADH)_activity","termid":"PBO:0034479"}


id: GO:0050315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: synephrine = (4-hydroxyphenyl)acetaldehyde + methylammonium.","definition_xrefs":["EC:4.2.1.88","RHEA:32203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"synephrine dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03359","MetaCyc:SYNEPHRINE-DEHYDRATASE-RXN"],"synonyms":[{"name":"1-(4-hydroxyphenyl)-2-(methylamino)ethanol hydro-lyase (methylamine-forming)","type":"related"}],"termid":"GO:0050315"}


id: GO:0050282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + H2O + NAD+ = 3-hydroxypyruvate + NH3 + NADH.","definition_xrefs":["EC:1.4.1.7","MetaCyc:SERINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"serine 2-dehydrogenase activity","secondary_identifiers":["RHEA:20884"],"synonyms":[{"name":"L-serine:NAD oxidoreductase (deaminating) activity","type":"related"},{"name":"L-serine:NAD+ 2-oxidoreductase (deaminating)","type":"related"},{"name":"serine dehydrogenase activity","type":"exact"}],"termid":"GO:0050282"}


id: SO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Terminal inverted repeat transposon superfamily Merlin elements create 8-9 bp target-site duplications (TSD).","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merlin_TIR_transposon","synonyms":[{"name":"DTE transposon","type":"exact"},{"name":"Merlin TIR transposon","type":"exact"},{"name":"Merlin transposon","type":"exact"}],"termid":"SO:0002281"}


id: PBO:0030162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_phosphatidylcholine_level","termid":"PBO:0030162"}


id: GO:0062208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a pattern recognition receptor signaling pathway.","definition_xrefs":["PMID:30610168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"positively_regulates","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"}


id: FYPO:0004571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during cellular response to oxidative stress","termid":"FYPO:0001279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"increased RNA level during cellular response to H2O2","type":"exact"},{"name":"increased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"increased transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004571"}


id: GO:0008580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal regulator activity (obsolete GO:0008580)","synonyms":[{"name":"cytoskeletal regulator activity","type":"exact"}],"termid":"GO:0008580"}


id: GO:1902364
data:
  {"annotated_genes":["SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["PMID:21131906","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to spindle pole body","type":"exact"},{"name":"down regulation of protein localization to spindle pole body","type":"exact"},{"name":"down-regulation of protein localisation to spindle pole body","type":"exact"},{"name":"down-regulation of protein localization to spindle pole body","type":"exact"},{"name":"downregulation of protein localisation to spindle pole body","type":"exact"},{"name":"downregulation of protein localization to spindle pole body","type":"exact"},{"name":"inhibition of protein localisation to spindle pole body","type":"narrow"},{"name":"inhibition of protein localization to spindle pole body","type":"narrow"},{"name":"negative regulation of protein localisation to spindle pole body","type":"exact"}],"termid":"GO:1902364","terms_by_termid":{"GO:1902543":null}}


id: GO:1900451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"positively_regulates","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of glutamate receptor signaling pathway","synonyms":[{"name":"activation of glutamate receptor signaling pathway","type":"narrow"},{"name":"activation of glutamate signaling pathway","type":"exact"},{"name":"activation of glutamate signalling pathway","type":"exact"},{"name":"positive regulation of glutamate signaling pathway","type":"exact"},{"name":"positive regulation of glutamate signalling pathway","type":"exact"},{"name":"up regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"up regulation of glutamate signaling pathway","type":"exact"},{"name":"up regulation of glutamate signalling pathway","type":"exact"},{"name":"up-regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"up-regulation of glutamate signaling pathway","type":"exact"},{"name":"up-regulation of glutamate signalling pathway","type":"exact"},{"name":"upregulation of glutamate receptor signaling pathway","type":"exact"},{"name":"upregulation of glutamate signaling pathway","type":"exact"},{"name":"upregulation of glutamate signalling pathway","type":"exact"}],"termid":"GO:1900451"}


id: FYPO:0000074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of a drug than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete resistance to drug (obsolete FYPO:0000074)","synonyms":[{"name":"drug resistance","type":"exact"},{"name":"drug resistant","type":"exact"},{"name":"resistance to drug during vegetative growth","type":"exact"},{"name":"resistant to drugs","type":"exact"}],"termid":"FYPO:0000074"}


id: GO:2000946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amylopectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of starch catabolic process","termid":"GO:2000882"},{"relation_name":"is_a","term_name":"negative regulation of amylopectin metabolic process","termid":"GO:2000943"},{"relation_name":"is_a","term_name":"regulation of amylopectin catabolic process","termid":"GO:2000945"},{"relation_name":"negatively_regulates","term_name":"amylopectin catabolic process","termid":"GO:2000897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044248","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of amylopectin catabolic process","synonyms":[{"name":"negative regulation of Amylopectin catabolism","type":"exact"}],"termid":"GO:2000946"}


id: PBO:0051941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2B pseudogene 1","termid":"PBO:0051941"}


id: PR:Q09807
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rim20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pH-response regulator protein palA/rim20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.05c","synonyms":[{"name":"Spom972h-rim20","type":"exact"}],"termid":"PR:Q09807"}


id: PBO:0086098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to regulate endocytosis of plasma membrane proteins; regulates by recruiting the ubiquitin ligase Rsp5p to its target in the plasma membrane; SWAT-GFP and mCherry fusion proteins localize to the cytosol","termid":"PBO:0086098"}


id: PBO:0031561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_binding","termid":"PBO:0031561"}


id: PBO:0061120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 9 pseudogene 1","termid":"PBO:0061120"}


id: FYPO:0001995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing polymyxin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on polymyxin B","synonyms":[{"name":"normal cell population growth in presence of polymyxin B","type":"exact"},{"name":"normal cell population growth on polymyxin B","type":"exact"},{"name":"normal cellular response to polymyxin B","type":"related"},{"name":"normal vegetative cell population growth on polymixin B","type":"exact"}],"termid":"FYPO:0001995"}


id: GO:0106242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = (+)-kolavenyl diphosphate.","definition_xrefs":["GOC:eab","PMID:29315936","RHEA:54676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"kolavenyl diphosphate synthase activity","secondary_identifiers":["EC:5.5.1.29"],"termid":"GO:0106242"}


id: PBO:0080635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 83","termid":"PBO:0080635"}


id: PBO:0051139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-15","termid":"PBO:0051139"}


id: PBO:0012856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp43","termid":"PBO:0012856"}


id: GO:0044060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an endocrine process, a process involving the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endocrine process","synonyms":[{"name":"regulation of endocrine system process","type":"exact"}],"termid":"GO:0044060"}


id: GO:0003028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by the action of chemoreceptors found in the aortic bodies and their resultant modulation of the vasomotor center. Chemoreceptors respond to oxygen, carbon dioxide and hydrogen ions.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by chemoreceptor signaling","termid":"GO:0001979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signaling","synonyms":[{"name":"aortic body chemoreceptor regulation of systemic arterial blood pressure","type":"exact"},{"name":"aortic body chemoreceptor response to lowering of systemic arterial blood pressure","type":"exact"},{"name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003028"}


id: PR:Q9P3V7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3V7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein C1348.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.03","synonyms":[{"name":"Spom972h-SPBC1348.03","type":"exact"}],"termid":"PR:Q9P3V7"}


id: PATO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of cyan colour and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyan","termid":"PATO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated cyan","synonyms":[{"name":"pale cyan","type":"exact"}],"termid":"PATO:0001270"}


id: GO:0016462
data:
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id: GO:0098840
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  {"annotated_genes":["SJAG_05319","SJAG_00851","SJAG_00918","SJAG_03540","SJAG_05266","SJAG_01211","SJAG_05220","SJAG_01546","SJAG_03437","SJAG_02731","SJAG_01775","SJAG_01371","SJAG_02761","SJAG_02336","SJAG_01297","SJAG_01224"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[100018,96469,104395,114840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[103632,85176,113093,85779,96603,92840,105015,87006,106027,110254,94702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"The directed movement of a protein along a microtubule, mediated by motor proteins.","definition_xrefs":["PMID:25987607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"transport along microtubule","termid":"GO:0010970"},{"relation_name":"is_a","term_name":"microtubule-based protein transport","termid":"GO:0099118"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02336":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein transport along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule-based protein transport","type":"broad"}],"termid":"GO:0098840","terms_by_termid":{"GO:0099117":null,"GO:0140210":null,"GO:1990976":null}}


id: PBO:0004524
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.8","termid":"PBO:0004524"}


id: GO:0034059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating a decline in oxygen levels to trace amounts, <0.1%.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anoxia","synonyms":[{"name":"response to anoxic stress","type":"exact"}],"termid":"GO:0034059"}


id: PBO:0060038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 26","termid":"PBO:0060038"}


id: GO:0061711
data:
  {"annotated_genes":["SJAG_00865","SJAG_04182"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100259,110401],"is_not":false,"summary":null,"term":"GO:0061711"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonylcarbamoyladenylate + adenine(37) in tRNA = AMP + N(6)-L-threonylcarbamoyladenine(37) in tRNA.","definition_xrefs":["EC:2.3.1.234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00865":null,"SJAG_04182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"N(6)-L-threonylcarbamoyladenine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6784494","MetaCyc:RXN-14570","RHEA:37059"],"termid":"GO:0061711","terms_by_termid":{"GO:0061711":null}}


id: GO:1990503
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory organelle found in neurons and associated with the formation of dendrodendritic gap junctions.","definition_xrefs":["PMID:7869120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body","termid":"GO:0042599"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"dendritic lamellar body","synonyms":[{"name":"DLB","type":"exact"}],"termid":"GO:1990503"}


id: GO:0072728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Gentian violet stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Gentian violet","synonyms":[{"name":"response to crystal violet","type":"exact"},{"name":"response to {4-[Bis-(4-dimethylamino-phenyl)-methylene]-cyclohexa-2,5-dienylidene}-dimethyl-ammonium chloride","type":"exact"}],"termid":"GO:0072728"}


id: PBO:0080874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YOD1 deubiquitinase","termid":"PBO:0080874"}


id: PBO:0072442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 6","termid":"PBO:0072442"}


id: GO:0016674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces an acceptor other than quinone or a related compound, oxygen, NAD, NADP, an iron-sulfur protein, disulfide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on sulfur group of donors, other acceptors (obsolete GO:0016674)","synonyms":[{"name":"oxidoreductase activity, acting on sulfur group of donors, other acceptors","type":"exact"},{"name":"oxidoreductase activity, acting on sulphur group of donors, other acceptors","type":"exact"}],"termid":"GO:0016674"}


id: GO:0008071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the ovarian follicle cells along the dorsal-ventral axis by a gene product encoded by somatic cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral axis specification, ovarian follicular epithelium","termid":"GO:0008069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maternal determination of dorsal/ventral axis, ovarian follicular epithelium, soma encoded","synonyms":[{"name":"maternal determination of dorsal-ventral axis, ovarian follicular epithelium, soma encoded","type":"exact"},{"name":"maternal determination of dorsal/ventral axis, follicular epithelium, soma encoded","type":"broad"},{"name":"maternal determination of dorsoventral axis, ovarian follicular epithelium, soma encoded","type":"exact"}],"termid":"GO:0008071"}


id: GO:1900151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.","definition_xrefs":["GOC:mcc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","synonyms":[{"name":"regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"GO:1900151"}


id: PBO:0062245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BL member 1 pseudogene","termid":"PBO:0062245"}


id: GO:1990580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic translational termination.","definition_xrefs":["PMID:11570975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational termination","termid":"GO:0006449"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation","termid":"GO:2000765"},{"relation_name":"regulates","term_name":"cytoplasmic translational termination","termid":"GO:0002184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of cytoplasmic translational termination","termid":"GO:1990580"}


id: GO:0044317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized neuron projection which is the site of synaptic transmission produced by retinal rod cells. Rod spherules are small round enlargements of the axon (3-5 micrometers diameter) or even extensions of the cell body.","definition_xrefs":["PMID:26930660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod spherule","synonyms":[{"name":"rod cell spherule","type":"exact"},{"name":"rod photoreceptor spherule","type":"exact"}],"termid":"GO:0044317"}


id: GO:0051782
data:
  {"annotated_genes":["SJAG_01386","SJAG_02169","SJAG_03681","SJAG_00845","SJAG_00883","SJAG_02514","SJAG_01790","SJAG_06270","SJAG_00229","SJAG_04455","SJAG_04943","SJAG_00526","SJAG_03508","SJAG_03048","SJAG_01464","SJAG_03592","SJAG_03353","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010974"},{"annotations":[98462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[95749,103219,98238,88869,98463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[98467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[95670,95750,97359,88956,86757,88870,103220,112069,87753,103359,101150,89493,91694,103668,106307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"negatively_regulates","term_name":"cell division","termid":"GO:0051301"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04551":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell division","type":"exact"},{"name":"down-regulation of cell division","type":"exact"},{"name":"downregulation of cell division","type":"exact"},{"name":"inhibition of cell division","type":"narrow"}],"termid":"GO:0051782","terms_by_termid":{"GO:0010974":null,"GO:0031030":null,"GO:1902413":null,"GO:1903472":null,"GO:1903500":null,"GO:1905757":null}}


id: PBO:0057754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1913","termid":"PBO:0057754"}


id: GO:0003264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardioblast proliferation. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000136"},{"relation_name":"regulates","term_name":"cardioblast proliferation","termid":"GO:0003263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardioblast proliferation","termid":"GO:0003264"}


id: GO:0097544
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The mid part of a cilium between the ciliary base and ciliary tip that extends into the extracellular space.","definition_xrefs":["GOC:cilia","GOC:krc","PMID:19866682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary shaft","synonyms":[{"name":"cilial shaft","type":"exact"},{"name":"cilium shaft","type":"exact"},{"name":"flagellar shaft","type":"exact"},{"name":"flagellum shaft","type":"exact"}],"termid":"GO:0097544"}


id: PBO:0051608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 32","termid":"PBO:0051608"}


id: PBO:0042942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome alignment maintaining phosphoprotein 1","termid":"PBO:0042942"}


id: GO:0140098
data:
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id: GO:2001229
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id: FYPO:0005679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal after cells have been exposed to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:27151298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein deubiquitination following cellular response to hydroxyurea during vegetative growth","synonyms":[{"name":"decreased protein deubiquitination during cellular response to hydroxyurea","type":"related"},{"name":"decreased protein deubiquitination following cellular response to HU","type":"exact"},{"name":"decreased protein deubiquitination following cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein deubiquitylation following cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein deubiquitination following cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005679"}


id: GO:0140124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Lewy body formation.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inclusion body assembly","termid":"GO:0090261"},{"relation_name":"is_a","term_name":"regulation of Lewy body formation","termid":"GO:0140122"},{"relation_name":"positively_regulates","term_name":"Lewy body formation","termid":"GO:0140121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Lewy body formation","termid":"GO:0140124"}


id: GO:0048868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pollen tube over time, from its initial formation to a mature structure.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube development","termid":"GO:0048868"}


id: GO:0098591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The leaflet the apical region of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external side of plasma membrane","termid":"GO:0009897"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0009986","GO:0005886"],"is_obsolete":false,"name":"external side of apical plasma membrane","termid":"GO:0098591"}


id: GO:1905190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metaphase/anaphase transition of meiosis II.","definition_xrefs":["PMID:21389117","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902103"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiosis II","termid":"GO:1905189"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of meiosis II","termid":"GO:1990950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of metaphase/anaphase transition of meiosis II","synonyms":[{"name":"negative regulation of meiosis II metaphase/anaphase transition","type":"exact"}],"termid":"GO:1905190"}


id: GO:0120057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of small intestinal transit","synonyms":[{"name":"regulation of small bowel transit","type":"exact"},{"name":"regulation of small intestine transit","type":"exact"}],"termid":"GO:0120057"}


id: PBO:0091508
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-TRNA Accumulation","termid":"PBO:0091508"}


id: PBO:0066262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 2","termid":"PBO:0066262"}


id: GO:0098834
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasmic component of the presynaptic endocytic zone.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"presynaptic endocytic zone","termid":"GO:0098833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"presynaptic endocytic zone cytoplasmic component","synonyms":[{"name":"cortex of presynaptic endocytic zone","type":"exact"}],"termid":"GO:0098834"}


id: GO:0018698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + chloroethene = A + chloride + ethene + H+.","definition_xrefs":["PMID:15294827","PMID:9171062","RHEA:68004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"chloroethene reductive dehalogenase activity","secondary_identifiers":["MetaCyc:VCREDCHLOR-RXN","UM-BBD_reactionID:r0352"],"synonyms":[{"name":"vinyl chloride reductive dehalogenase activity","type":"exact"}],"termid":"GO:0018698"}


id: MOD:00553
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a (2-sulfanylethyl)sulfanyl (or thioethylthiol) group for a hydroxy group.","definition_xrefs":["DeltaMass:0","PubMed:11507762","Unimod:200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,2-ethanedithiol modified residue","synonyms":[{"name":"1,2-ethanedithiol (EDT)","type":"exact"},{"name":"EDT","type":"related"},{"name":"Ethanedithiol","type":"related"}],"termid":"MOD:00553"}


id: PBO:0051005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 pseudogene 3","termid":"PBO:0051005"}


id: GO:0002395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response taking place in the nasopharyngeal-associated lymphoid tissue (NALT). NALT includes the tonsils and adenoids.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response in gut-associated lymphoid tissue","termid":"GO:0002387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response in nasopharyngeal-associated lymphoid tissue","synonyms":[{"name":"immune response in NALT","type":"exact"}],"termid":"GO:0002395"}


id: PATO:0002214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A lobed quality inhering in a bearer by virtue of the bearer's being divided into or having two lobes.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/bilobed"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lobed","termid":"PATO:0001979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilobed","termid":"PATO:0002214"}


id: PBO:0113161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp90 chaperone; functionally redundant with Hsc82p; required for pheromone signaling; negative regulator of the Hsf1p-dependent heat shock response with Cpr7p; docks with Tom70p for mitochondrial preprotein delivery; promotes telomerase DNA binding, nucleotide addition; promotes solubility of chaperone-substrate complexes; DNA damage induced nuclear import is Aha1p dependent; protein abundance increases in response to DNA replication stress; human homolog, HSP90AB1, complements null mutant","termid":"PBO:0113161"}


id: GO:0009765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosynthesis, light harvesting","synonyms":[{"name":"energy dissipation","type":"related"}],"termid":"GO:0009765"}


id: GO:0050110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions : D-galactosyl-3-(N-acetyl-beta-D-galactosaminyl)-L-serine + H2O = D-galactosyl-3-N-acetyl-beta-D-galactosamine + L-serine and D-galactosyl-3-(N-acetyl-beta-D-galactosaminyl)-L-threonyl + H2O = D-galactosyl-3-N-acetyl-beta-D-galactosamine + L-threonyl.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete endo-alpha-N-acetylgalactosaminidase activity (obsolete GO:0050110)","termid":"GO:0050110"}


id: PBO:0051247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-78-1 (pseudogene)","termid":"PBO:0051247"}


id: PBO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Ltv1 (predicted)","termid":"PBO:0001770"}


id: PBO:0036493
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26 copies of a 35 amino acid repeat","termid":"PBO:0036493"}


id: PR:Q9UUH8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC630.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUH8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C630.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.04c","synonyms":[{"name":"Spom972h-SPAC630.04c","type":"exact"}],"termid":"PR:Q9UUH8"}


id: GO:0006090
data:
  {"annotated_genes":["SJAG_02107","SJAG_02158","SJAG_04495","SJAG_04048","SJAG_00839","SJAG_02135","SJAG_03290","SJAG_02734","SJAG_03373","SJAG_05314","SJAG_02945","SJAG_06622","SJAG_00464","SJAG_02369","SJAG_00605","SJAG_03852","SJAG_04192","SJAG_03660","SJAG_01310","SJAG_02796","SJAG_04842","SJAG_00461","SJAG_03903","SJAG_04334","SJAG_00633","SJAG_01402","SJAG_02785","SJAG_03828","SJAG_00685","SJAG_03786","SJAG_06621","SJAG_02009","SJAG_03743","SJAG_02176","SJAG_02006","SJAG_03064","SJAG_00866","SJAG_00027"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84541,93332,93333,96951,101555,114678],"is_not":false,"summary":null,"term":"GO:0006090"},{"annotations":[91048,104721,114630,110396,83463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[101939,105060,94346,105522,105523,99491,105056,105524,105527,105526,99753,105057,105525,112522,101575,101573,91058,101574,105058,100580,90567,94066,101940,105059,105061,105062,105521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107723,94262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[74894,72076],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[94347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042866"},{"annotations":[95109],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[85246],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyruvate, 2-oxopropanoate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00464":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00866":null,"SJAG_01310":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02158":null,"SJAG_02176":null,"SJAG_02369":null,"SJAG_02734":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03743":null,"SJAG_03786":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04842":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyruvate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Pyruvic_acid","GO:0006087","MetaCyc:P41-PWY"],"synonyms":[{"name":"pyruvate dehydrogenase bypass","type":"related"},{"name":"pyruvate metabolism","type":"exact"}],"termid":"GO:0006090","terms_by_termid":{"GO:0006086":null,"GO:0006090":null,"GO:0006096":null,"GO:0006110":null,"GO:0010510":null,"GO:0042866":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: GO:0061186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of heterochromatin formation at silent mating-type cassette.","definition_xrefs":["PMID:10388812","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterochromatin formation","termid":"GO:0031452"},{"relation_name":"is_a","term_name":"regulation of silent mating-type cassette heterochromatin formation","termid":"GO:0090054"},{"relation_name":"negatively_regulates","term_name":"silent mating-type cassette heterochromatin formation","termid":"GO:0030466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"negative regulation of silent mating-type cassette heterochromatin formation","synonyms":[{"name":"negative regulation of chromatin silencing at silent mating-type cassette","type":"exact"},{"name":"negative regulation of silent mating-type cassette heterochromatin assembly","type":"exact"}],"termid":"GO:0061186"}


id: PBO:0072471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA 2","termid":"PBO:0072471"}


id: PBO:0086799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR220C is not an essential gene","termid":"PBO:0086799"}


id: PBO:0061288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 9","termid":"PBO:0061288"}


id: PBO:0046535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 3 member 2","termid":"PBO:0046535"}


id: PBO:0075947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 2 (pseudogene)","termid":"PBO:0075947"}


id: GO:0070556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor TFIID complex that contains the TBP-associated factor TAF4B (also known as TAFII105 in human), a cell-type-specific variant of TAF4.","definition_xrefs":["PMID:8858156","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor TFIID complex","termid":"GO:0005669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005654","GO:0032991"],"is_obsolete":false,"name":"TAF4B-containing transcription factor TFIID complex","synonyms":[{"name":"TFIID complex, B-cell specific","type":"related"}],"termid":"GO:0070556"}


id: PBO:0063450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 8B","termid":"PBO:0063450"}


id: GO:0035421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity involved in innate immune response (obsolete GO:0035421)","termid":"GO:0035421"}


id: PBO:0087669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the INO80 chromatin remodeling complex","termid":"PBO:0087669"}


id: SO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The location of DNA that has come from a viral origin.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_location","termid":"SO:0000735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proviral_location","synonyms":[{"name":"proviral location","type":"exact"}],"termid":"SO:0000751"}


id: GO:0004427
data:
  {"annotated_genes":["SJAG_02679","SJAG_01154","SJAG_01875","SJAG_04242"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89747,92846,96139,101309,110758],"is_not":false,"summary":null,"term":"GO:0004427"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + H2O = H+ + 2 phosphate.","definition_xrefs":["EC:3.6.1.1","RHEA:24576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01154":null,"SJAG_01875":null,"SJAG_02679":null,"SJAG_04242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inorganic diphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00004","Reactome:R-HSA-449937","Reactome:R-HSA-6788912","Reactome:R-HSA-71732","MetaCyc:INORGPYROPHOSPHAT-RXN"],"synonyms":[{"name":"diphosphate phosphohydrolase activity","type":"related"},{"name":"inorganic diphosphatase activity","type":"exact"},{"name":"inorganic pyrophosphatase activity","type":"related"},{"name":"pyrophosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0004427","terms_by_termid":{"GO:0004427":null}}


id: GO:0060176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aggregation during sorocarp development. Aggregation involved in sorocarp development is the process whose specific outcome is the progression of the aggregate over time, from its formation to the point when a slug is formed. Aggregate development begins in response to starvation and continues by the chemoattractant-mediated movement of cells toward each other. The aggregate is a multicellular structure that gives rise to the slug.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"aggregation involved in sorocarp development","termid":"GO:0031152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aggregation involved in sorocarp development","termid":"GO:0060176"}


id: GO:0007084
data:
  {"annotated_genes":["SJAG_00900","SJAG_01745","SJAG_01242","SJAG_05207","SJAG_03891","SJAG_03892","SJAG_04489","SJAG_01050","SJAG_00416","SJAG_03783"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83991,87366,92018,94030,96975,99250,99845,102673,115565,115566,115567,115568],"is_not":false,"summary":null,"term":"GO:0007084"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle process involving ESCRTIII that results in reformation of the nuclear envelope after mitotic nuclear division. In organisms undergoing closed mitosis this involves resealing or 'repair' of the nuclear envelope in the nuclear bridge.","definition_xrefs":["PMID:28242692","PMID:32109380","PMID:26040712","PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane reassembly","termid":"GO:0031468"},{"relation_name":"is_a","term_name":"mitotic nuclear membrane organization","termid":"GO:0101024"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"mitotic nuclear membrane reassembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32109380":null,"PMID:32243490":null},"synonyms":[{"name":"mitotic nuclear envelope reassembly","type":"related"},{"name":"nuclear envelope repair","type":"broad"},{"name":"nuclear envelope resealing","type":"broad"}],"termid":"GO:0007084","terms_by_termid":{"GO:0007084":null}}


id: GO:0090319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of chylomicron remodeling. Chylomicron remodeling is the acquisition, loss or modification of a protein or lipid within a chylomicron, including the hydrolysis of triglyceride by lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of chylomicron remodeling","termid":"GO:0090318"},{"relation_name":"positively_regulates","term_name":"chylomicron remodeling","termid":"GO:0034371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chylomicron remodeling","synonyms":[{"name":"positive regulation of chylomicron remodelling","type":"exact"}],"termid":"GO:0090319"}


id: GO:0035796
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex for the transport of metabolites into the cell, consisting of 4 subunits: a transmembrane substrate-binding protein (known as the S component), and an energy-coupling module that comprises two ATP-binding proteins (known as the A and A' components) and a transmembrane protein (known as the T component). Transport of the substrate across the membrane is driven by the hydrolysis of ATP.","definition_xrefs":["PMID:21135102","PMID:18931129","PMID:20972419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter complex, transmembrane substrate-binding subunit-containing","synonyms":[{"name":"ATP-binding cassette (ABC) transporter complex, ECF-type","type":"exact"},{"name":"energy coupling factor (ECF)-type ABC transporter","type":"exact"},{"name":"energy-coupling factor transporter","type":"exact"}],"termid":"GO:0035796"}


id: PBO:0076978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylguanosine synthase 1","termid":"PBO:0076978"}


id: GO:0005095
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112479],"is_not":false,"summary":null,"term":"GO:0005095"}]},"cv_name":"molecular_function","definition":"Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"GTPase regulator activity","termid":"GO:0030695"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0004857","GO:0140678","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"GTPase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GIP","type":"broad"}],"termid":"GO:0005095","terms_by_termid":{"GO:0005095":null}}


id: PBO:0030234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus_(obsolete_FYPO:0001464)","termid":"PBO:0030234"}


id: PBO:0090642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp15","termid":"PBO:0090642"}


id: GO:0030987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a high molecular weight kininogen receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"high molecular weight kininogen receptor binding","termid":"GO:0030987"}


id: PBO:0078037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 27","termid":"PBO:0078037"}


id: SO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory promoter element identified in mutation experiments, with consensus sequence: CACGTG. Present in promoters, intergenic regions, coding regions, and introns. They are involved in gene expression responses to light and interact with G-box binding factor and I-box binding factor 1a.","definition_xrefs":["PMID:19249238","PMID:8571452","SO:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G_box","synonyms":[{"name":"G-box","type":"exact"},{"name":"GBF binding sequence","type":"exact"}],"termid":"SO:0001980"}


id: FYPO:0008045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than four nuclei, is longer than normal, and has a greater length:diameter ratio than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000005","FYPO:0000032","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"elongated vegetative cell with more than four nuclei","termid":"FYPO:0008045"}


id: PBO:0038479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 4","termid":"PBO:0038479"}


id: PBO:0039817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor GTPase activating protein 1","termid":"PBO:0039817"}


id: PBO:0057010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 101-1","termid":"PBO:0057010"}


id: PR:O60099
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs65 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14F5.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.02","synonyms":[{"name":"Spom972h-trs65","type":"exact"}],"termid":"PR:O60099"}


id: PBO:0031519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_damage_checkpoint_override_in_response_to_caffeine","termid":"PBO:0031519"}


id: GO:0009489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A low molecular weight mononuclear iron protein involved in electron transfer, with an iron tetrahedrally coordinated by the sulfurs of four conserved cysteine residues.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete rubredoxin (obsolete GO:0009489)","synonyms":[{"name":"rubredoxin","type":"exact"}],"termid":"GO:0009489"}


id: GO:0043042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Activation of an amino acid for incorporation into a peptide by a nonribosomal process, catalyzed by subunits of nonribosomal peptide synthase. The amino acid is adenylated at its carboxylate group (ATP-dependent) then transferred to the thiol group of an enzyme-bound phosphopantetheine cofactor.","definition_xrefs":["PMID:9712910","GOC:jl","PMID:9250661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid activation for nonribosomal peptide biosynthetic process","termid":"GO:0043041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"amino acid adenylylation by nonribosomal peptide synthase","synonyms":[{"name":"amino acid adenylation by NRPS","type":"exact"},{"name":"amino acid adenylation by nonribosomal peptide synthase","type":"exact"}],"termid":"GO:0043042"}


id: PBO:0057444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 562","termid":"PBO:0057444"}


id: GO:0047852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: transferrin[Fe2+]2 + NAD+ = transferrin[Fe3+]2 + NADH.","definition_xrefs":["RHEA:13841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"diferric-transferrin reductase (NAD+) activity","secondary_identifiers":["EC:1.16.1.2","MetaCyc:DIFFERIC-TRANSFERRIN-REDUCTASE-RXN"],"synonyms":[{"name":"NADH diferric transferrin reductase activity","type":"related"},{"name":"diferric transferrin reductase activity","type":"related"},{"name":"transferrin reductase activity","type":"related"},{"name":"transferrin[Fe(II)]2:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047852"}


id: GO:0002798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antibacterial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antibacterial peptide production","termid":"GO:0002787"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide secretion","termid":"GO:0002795"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide secretion","termid":"GO:0002797"},{"relation_name":"negatively_regulates","term_name":"antibacterial peptide secretion","termid":"GO:0002779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antibacterial peptide secretion","synonyms":[{"name":"down regulation of antibacterial peptide secretion","type":"exact"},{"name":"down-regulation of antibacterial peptide secretion","type":"exact"},{"name":"downregulation of antibacterial peptide secretion","type":"exact"},{"name":"inhibition of antibacterial peptide secretion","type":"narrow"}],"termid":"GO:0002798"}


id: GO:0042651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigmented membrane of any thylakoid.","definition_xrefs":["GOC:pr","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic membrane","termid":"GO:0034357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"thylakoid membrane","termid":"GO:0042651"}


id: GO:0072727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a CCCP stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to CCCP (obsolete GO:0072727)","synonyms":[{"name":"cellular response to carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"}],"termid":"GO:0072727"}


id: PBO:0088302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A histone disassembly chaperone Ccp1","termid":"PBO:0088302"}


id: PBO:0069808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1094, pseudogene","termid":"PBO:0069808"}


id: GO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell of the myocardium from one site to another that will contribute to heart jogging.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"heart jogging","termid":"GO:0003146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart jogging","termid":"GO:0003305"}


id: GO:0017002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with activin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Activin is one of two gonadal glycoproteins related to transforming growth factor beta.","definition_xrefs":["ISBN:0198506732","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0038023","GO:0003824","GO:0004672","GO:0016740","GO:0016301","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"activin receptor activity","synonyms":[{"name":"activin-activated receptor activity","type":"exact"}],"termid":"GO:0017002"}


id: PATO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal orientation","synonyms":[{"name":"dorsally directed","type":"exact"}],"termid":"PATO:0002495"}


id: PBO:0045520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin alpha","termid":"PBO:0045520"}


id: GO:1901415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole biosynthetic process from glycine and succinyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","termid":"GO:1901413"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole biosynthetic process from glycine and succinyl-CoA","termid":"GO:0033527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0055086","GO:0033013","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","synonyms":[{"name":"activation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"activation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"activation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"narrow"},{"name":"activation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"activation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"positive regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"positive regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"positive regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"positive regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"}],"termid":"GO:1901415"}


id: PBO:0081784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF710 antisense RNA 1","termid":"PBO:0081784"}


id: GO:0097668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Saf1 in S. cerevisiae (Pof9 in S. pombe).","definition_xrefs":["PMID:15147268","PMID:11283612","GOC:jd","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Saf1/Pof9 ubiquitin ligase complex","termid":"GO:0097668"}


id: GO:1900645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chanoclavine-I biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chanoclavine-I biosynthetic process (obsolete GO:1900645)","synonyms":[{"name":"activation of chanoclavine-I anabolism","type":"exact"},{"name":"activation of chanoclavine-I biosynthesis","type":"exact"},{"name":"activation of chanoclavine-I biosynthetic process","type":"narrow"},{"name":"activation of chanoclavine-I formation","type":"exact"},{"name":"activation of chanoclavine-I synthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I anabolism","type":"exact"},{"name":"positive regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I formation","type":"exact"},{"name":"positive regulation of chanoclavine-I synthesis","type":"exact"},{"name":"up regulation of chanoclavine-I anabolism","type":"exact"},{"name":"up regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"up regulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"up regulation of chanoclavine-I formation","type":"exact"},{"name":"up regulation of chanoclavine-I synthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I anabolism","type":"exact"},{"name":"up-regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"up-regulation of chanoclavine-I formation","type":"exact"},{"name":"up-regulation of chanoclavine-I synthesis","type":"exact"},{"name":"upregulation of chanoclavine-I anabolism","type":"exact"},{"name":"upregulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"upregulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"upregulation of chanoclavine-I formation","type":"exact"},{"name":"upregulation of chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900645"}


id: GO:0017014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent addition of a nitric oxide group to an amino acid within a protein.","definition_xrefs":["GOC:ai","PMID:20972426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein nitrosylation","synonyms":[{"name":"protein amino acid nitrosylation","type":"exact"}],"termid":"GO:0017014"}


id: GO:0001991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensinogen metabolites in the bloodstream modulate the force with which blood passes through the circulatory system. The process begins when renin is released and cleaves angiotensinogen.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by renin-angiotensin","termid":"GO:0003081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by circulatory renin-angiotensin","synonyms":[{"name":"circulatory renin-angiotensin blood pressure regulation","type":"exact"},{"name":"circulatory renin-angiotensin control of blood pressure","type":"related"},{"name":"circulatory renin-angiotensin regulation of blood pressure","type":"exact"},{"name":"control of blood pressure by circulatory renin-angiotensin","type":"related"},{"name":"renin-angiotensin blood pressure control","type":"related"}],"termid":"GO:0001991"}


id: SO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The polypeptide sequence that remains when the cleaved peptide regions have been cleaved from the immature peptide.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"mature_protein_region_of_CDS","termid":"SO:0002249"},{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"},{"relation_name":"part_of","term_name":"immature_peptide_region","termid":"SO:0001063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"mature_protein_region","secondary_identifiers":["BS:00149"],"synonyms":[{"name":"INSDC_feature:mat_peptide","type":"exact"},{"name":"chain","type":"related"},{"name":"mature peptide","type":"related"},{"name":"mature protein region","type":"exact"}],"termid":"SO:0000419"}


id: GO:0097343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ripoptosome, a protein complex whose formation can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.","definition_xrefs":["PMID:22274400","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"ripoptosome assembly","termid":"GO:0097343"}


id: PBO:0003144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiRNA sme2","termid":"PBO:0003144"}


id: PR:Q9USY7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fzo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USY7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane GTPase fzo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1706.03","synonyms":[{"name":"Spom972h-fzo1","type":"exact"}],"termid":"PR:Q9USY7"}


id: PBO:0067246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 319, pseudogene","termid":"PBO:0067246"}


id: PATO:0005017
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being compressed from the side facing the lips to the side facing the tongue.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labiolingually compressed","termid":"PATO:0005017"}


id: PBO:0074204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 13","termid":"PBO:0074204"}


id: PBO:0076230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUPT20H like 1","termid":"PBO:0076230"}


id: PBO:0073886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 3","termid":"PBO:0073886"}


id: GO:0046350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactosaminoglycans, any one of a group of polysaccharides that contain amino sugars derived from the galactose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"galactosaminoglycan metabolic process","synonyms":[{"name":"galactosaminoglycan metabolism","type":"exact"}],"termid":"GO:0046350"}


id: PBO:0004064
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.4.1.5","termid":"PBO:0004064"}


id: PBO:0042602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 2","termid":"PBO:0042602"}


id: PBO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc2","termid":"PBO:0002477"}


id: PATO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000451 pilosity value (obsolete PATO:0000451)","termid":"PATO:0000451"}


id: PATO:0000826
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000826 visual acuity value (obsolete PATO:0000826)","termid":"PATO:0000826"}


id: PBO:0041041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA2 DNA repair associated","termid":"PBO:0041041"}


id: PBO:0039150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 5","termid":"PBO:0039150"}


id: PBO:0018067
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine DeAminase","termid":"PBO:0018067"}


id: GO:0035555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a SLIT protein causes activation of the receptor, Roundabout (ROBO).","definition_xrefs":["GOC:vk"],"gene_count":0,"genotype_count":0,"name":"obsolete initiation of Roundabout signal transduction (obsolete GO:0035555)","synonyms":[{"name":"initiation of Roundabout signal transduction","type":"exact"}],"termid":"GO:0035555"}


id: GO:0043630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end of a non-coding RNA, occurring as part of the process of polyadenylation-dependent non-coding RNA catabolism.","definition_xrefs":["GOC:dph","GOC:jl","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process (obsolete GO:0043630)","synonyms":[{"name":"ncRNA polyadenylation during polyadenylation-dependent ncRNA catabolic process","type":"related"},{"name":"ncRNA polyadenylation involved in poly(A)-dependent ncRNA catabolic process","type":"related"}],"termid":"GO:0043630"}


id: PBO:0049256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin and cysteine rich domain containing 2","termid":"PBO:0049256"}


id: PBO:0083222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene SSA1/YAL005C","termid":"PBO:0083222"}


id: GO:1900466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of arginine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8455631","PMID:19233144","GOC:dgf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900466)","synonyms":[{"name":"activation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900466"}


id: GO:0021693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the cerebellar Purkinje cell layer. This process pertains to the physical shaping of a rudimentary structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer morphogenesis","termid":"GO:0021692"},{"relation_name":"part_of","term_name":"cerebellar cortex structural organization","termid":"GO:0021698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer structural organization","synonyms":[{"name":"cerebellar Purkinje cell layer structural organisation","type":"exact"}],"termid":"GO:0021693"}


id: PBO:0057172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 324","termid":"PBO:0057172"}


id: GO:0006863
data:
  {"annotated_genes":["SJAG_00760","SJAG_03777","SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[108694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[111310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"},{"annotations":[84471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042906"}]},"cv_name":"biological_process","definition":"The directed movement of purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transport","termid":"GO:0015851"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_03777":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"purine nucleobase transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015852"],"synonyms":[{"name":"purine base transmembrane transport","type":"exact"},{"name":"purine base transport","type":"exact"},{"name":"purine transmembrane transport","type":"related"},{"name":"purine transport","type":"related"}],"termid":"GO:0006863","terms_by_termid":{"GO:0042906":null,"GO:0098702":null,"GO:0098710":null,"GO:0140140":null}}


id: PBO:0079831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uromodulin","termid":"PBO:0079831"}


id: PBO:0111906
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain","termid":"PBO:0111906"}


id: PBO:0045621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 33 (pseudogene)","termid":"PBO:0045621"}


id: PBO:0036373
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uner Tan Syndrome","termid":"PBO:0036373"}


id: FYPO:0006371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of prophase of the first meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of meiotic prophase I","termid":"FYPO:0006371"}


id: _global:is_measurement_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_measurement_of","termid":"_global:is_measurement_of"}


id: GO:0035784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of nickel cations within an organism or cell.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete obsolete nickel cation homeostasis (obsolete GO:0035784)","synonyms":[{"name":"nickel homeostasis","type":"exact"}],"termid":"GO:0035784"}


id: PBO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S26 (predicted)","termid":"PBO:0000231"}


id: PBO:0065448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 5","termid":"PBO:0065448"}


id: PBO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.33","termid":"PBO:0001669"}


id: GO:1901979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inward rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie","PMID:23449501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of inward rectifier potassium channel activity","synonyms":[{"name":"regulation of Kir channel activity","type":"exact"}],"termid":"GO:1901979"}


id: GO:0010690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a disturbance in organismal or cellular homeostasis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to stress","termid":"GO:0010690"}


id: PBO:0064066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 100","termid":"PBO:0064066"}


id: PBO:0040818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICRA like chromatin remodeling complex associated protein","termid":"PBO:0040818"}


id: PBO:0089902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily","termid":"PBO:0089902"}


id: GO:0100001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any action potential process that regulates skeletal muscle contraction.","definition_xrefs":["GOC:cjm","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential","termid":"GO:0001508"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by action potential","termid":"GO:0100001"}


id: FYPO:0006909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G1/S transition of the mitotic cell cycle occurs at a smaller cell size than normal after the cell has been arrested in G1 phase due to nitrogen starvation. The cell remains arrested in G1.","definition_xrefs":["PomBase:mah","PMID:872890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"mitotic G1/S phase transition at small cell size","synonyms":[{"name":"G1/S phase transition at small cell size during mitotic cell cycle","type":"exact"},{"name":"mitotic G1/S phase transition at abnormally small cell size","type":"exact"},{"name":"mitotic G1/S phase transition at small cell size during vegetative growth","type":"exact"},{"name":"small cell size at G1/S transition of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006909"}


id: FYPO:0001667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell during glucose starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cAMP level","termid":"FYPO:0001666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cAMP level during glucose starvation","synonyms":[{"name":"normal cAMP accumulation during glucose starvation","type":"related"},{"name":"normal cAMP level during glucose depletion","type":"exact"},{"name":"normal cAMP level during glucose deprivation","type":"exact"},{"name":"normal cAMP level during glucose limitation","type":"related"},{"name":"normal cellular cAMP level during glucose starvation","type":"exact"},{"name":"normal cyclic AMP level during glucose starvation","type":"exact"}],"termid":"FYPO:0001667"}


id: PBO:0051958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR interacting domain containing 1","termid":"PBO:0051958"}


id: internal:interim
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interim","termid":"internal:interim"}


id: PBO:0070643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 14","termid":"PBO:0070643"}


id: GO:0008281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with sulfonylurea, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"sulfonylurea receptor activity","synonyms":[{"name":"sulphonylurea receptor activity","type":"exact"}],"termid":"GO:0008281"}


id: GO:0015010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrocorphins, tetrapyrroles that combine the structural elements of both porphyrins and corrins.","definition_xrefs":["Wikipedia:Morphine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel-tetrapyrrole coenzyme metabolic process","termid":"GO:0015011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"tetrahydrocorphin metabolic process","synonyms":[{"name":"tetrahydrocorphin metabolism","type":"exact"}],"termid":"GO:0015010"}


id: PBO:0088333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas5","termid":"PBO:0088333"}


id: FYPO:0006160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad51 accumulates is lower than normal during prophase of the first meiotic nuclear division.","definition_xrefs":["PMID:16532353","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of Rad51 foci during meiotic prophase I","synonyms":[{"name":"decreased number of Rad51 foci during prophase I","type":"exact"},{"name":"reduced number of Rad51 foci during prophase I","type":"exact"}],"termid":"FYPO:0006160"}


id: GO:0004186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a C-terminal amino acid with a broad specificity.","definition_xrefs":["EC:3.4.16.5"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase C activity (obsolete GO:0004186)","synonyms":[{"name":"carboxypeptidase C activity","type":"exact"},{"name":"carboxypeptidase Y activity","type":"related"},{"name":"cathepsin A activity","type":"narrow"},{"name":"deamidase","type":"related"},{"name":"lysosomal carboxypeptidase A","type":"narrow"},{"name":"lysosomal protective protein activity","type":"narrow"},{"name":"serine carboxypeptidase I activity","type":"related"},{"name":"serine-type carboxypeptidase I activity","type":"related"},{"name":"vacuolar carboxypeptidase Y","type":"narrow"}],"termid":"GO:0004186"}


id: PBO:0048080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 1","termid":"PBO:0048080"}


id: PBO:0047132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 171 member A1","termid":"PBO:0047132"}


id: PBO:0110345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDCA7 pseudogene 1","termid":"PBO:0110345"}


id: GO:0099606
data:
  {"annotated_genes":["SJAG_04884","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90812,106042],"is_not":false,"summary":null,"term":"GO:0099606"}]},"cv_name":"biological_process","definition":"The cell cycle process in which chromosomes that are laterally attached to one or more mitotic spindle microtubules migrate towards the spindle equator via plus-end-directed movement along the microtubules. This process is part of mitotic metaphase plate congression.","definition_xrefs":["GOC:dos","PMID:26258632","PMID:26705896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic metaphase chromosome alignment","termid":"GO:0007080"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04745":null,"SJAG_04884":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0000070","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"microtubule plus-end directed mitotic chromosome migration","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"plus-end directed chromosome gliding","type":"exact"}],"termid":"GO:0099606","terms_by_termid":{"GO:0099606":null}}


id: GO:0047705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 bilirubin + O2 = 2 biliverdin + 2 H2O.","definition_xrefs":["RHEA:20980","EC:1.3.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"bilirubin oxidase activity","secondary_identifiers":["MetaCyc:BILIRUBIN-OXIDASE-RXN","KEGG_REACTION:R02394"],"synonyms":[{"name":"bilirubin oxidase M-1","type":"related"},{"name":"bilirubin:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047705"}


id: PBO:0026817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_nitrogen_starvation","termid":"PBO:0026817"}


id: GO:1990812
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thin, stiff protrusion extended by the leading edge of an axonal or dendritic growth cone.","definition_xrefs":["PMID:25598228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filopodium","termid":"GO:0030175"},{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone filopodium","termid":"GO:1990812"}


id: GO:0005715
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes in pachytene during meiosis I.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination nodule","termid":"GO:0005713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"late recombination nodule","termid":"GO:0005715"}


id: GO:0009958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orientation of plant parts towards gravity.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gravitropism","termid":"GO:0009630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive gravitropism","synonyms":[{"name":"root gravitropism","type":"narrow"}],"termid":"GO:0009958"}


id: PBO:0065300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 4","termid":"PBO:0065300"}


id: GO:0038106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to choriogonadotropin hormone, a heterodimer, with an alpha subunit identical to that of luteinizing hormone (LH), follicle-stimulating hormone (FSH) and thyroid-stimulating hormone (TSH), and a unique beta subunit.","definition_xrefs":["GOC:rl","Wikipedia:Human_chorionic_gonadotropin","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"choriogonadotropin hormone binding","synonyms":[{"name":"chorionic gonadotrophin binding","type":"exact"},{"name":"chorionic gonadotropin binding","type":"exact"}],"termid":"GO:0038106"}


id: GO:0001602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with pancreatic polypeptide PP to initiate a change in cell activity.","definition_xrefs":["PMID:9315606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor activity","termid":"GO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"pancreatic polypeptide receptor activity","termid":"GO:0001602"}


id: PBO:0050582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 6","termid":"PBO:0050582"}


id: GO:0090671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which telomerase RNA (TERC) is transported to, or maintained in, a Cajal body.","definition_xrefs":["GOC:nc","GOC:BHF_telomere","PMID:25467444","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization to Cajal body","termid":"GO:0090670"},{"relation_name":"is_a","term_name":"telomerase RNA localization","termid":"GO:0090672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"telomerase RNA localization to Cajal body","termid":"GO:0090671"}


id: MOD:00086
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-palmitoyl-L-lysine.","definition_xrefs":["PubMed:2498336","PubMed:7801126","PubMed:7939682","Unimod:47#K","RESID:AA0077","OMSSA:93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-palmitoylated residue","termid":"MOD:00651"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-palmitoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(hexadecanoylamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-(hexadecanamido)hexanoic acid","type":"exact"},{"name":"LIPID N6-palmitoyl lysine","type":"exact"},{"name":"N(zeta)-palmitoyllysine","type":"exact"},{"name":"N6-(1-oxohexadecyl)-L-lysine","type":"exact"},{"name":"N6-hexadecanoylated L-lysine","type":"exact"},{"name":"N6-palmitoyl-L-lysine","type":"exact"},{"name":"N6-palmitoylated L-lysine","type":"exact"},{"name":"N6PamLys","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"epsilon-palmitoyllysine","type":"exact"},{"name":"palmitoylationk","type":"exact"}],"termid":"MOD:00086"}


id: GO:1903711
data:
  {"annotated_genes":["SJAG_02125","SJAG_02059","SJAG_02060"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57657,105572,105578,105584,107071,113523],"is_not":false,"summary":null,"term":"GO:1903711"}]},"cv_name":"biological_process","definition":"The process in which spermidine is transported across a membrane.","definition_xrefs":["PMID:15637075","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermidine transport","termid":"GO:0015848"},{"relation_name":"is_a","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"spermidine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1903711","terms_by_termid":{"GO:1903711":null}}


id: PBO:0075298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sine oculis binding protein homolog","termid":"PBO:0075298"}


id: PBO:0089989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII cargo receptor subunit Sec23b","termid":"PBO:0089989"}


id: FYPO:0004378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at the silenced mating-type cassettes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to heterochromatin at silent mating-type cassette","synonyms":[{"name":"normal protein localisation to heterochromatin at silent mating-type cassette","type":"exact"},{"name":"normal protein localization to heterochromatin at mating-type region","type":"exact"},{"name":"normal protein localization to heterochromatin at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"normal protein localization to heterochromatin at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"normal protein localization to mating-type region heterochromatin","type":"exact"},{"name":"normal protein localization to silent mating type heterochromatin","type":"exact"},{"name":"normal protein localization to silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0004378"}


id: GO:0015417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + polyamine(out) = ADP + phosphate + polyamine(in).","definition_xrefs":["RHEA:29999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type polyamine transporter activity","secondary_identifiers":["EC:7.6.2.11","MetaCyc:3.6.3.31-RXN","GO:0015595"],"synonyms":[{"name":"polyamine ABC transporter","type":"narrow"},{"name":"polyamine porter activity","type":"broad"},{"name":"ATP-dependent polyamine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled polyamine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled spermidine transmembrane transporter activity","type":"narrow"},{"name":"polyamine-importing ATPase activity","type":"narrow"},{"name":"polyamine-transporting ATPase activity","type":"related"},{"name":"spermidine porter activity","type":"narrow"},{"name":"spermidine-importing ATPase activity","type":"narrow"}],"termid":"GO:0015417"}


id: PBO:0061810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 centriole and centriolar satellite protein","termid":"PBO:0061810"}


id: PR:Q09787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G6.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G6.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.09","synonyms":[{"name":"Spom972h-SPAC13G6.09","type":"exact"}],"termid":"PR:Q09787"}


id: GO:0061090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of sequestering of zinc ion. Sequestering of zinc ion is the process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sequestering of zinc ion (obsolete GO:0061090)","termid":"GO:0061090"}


id: GO:0034626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Elongation of a fatty acid chain into which two or more C-C double bonds have been introduced.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid elongation, unsaturated fatty acid","termid":"GO:0019368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fatty acid elongation, polyunsaturated fatty acid","termid":"GO:0034626"}


id: GO:1903913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fusion of virus membrane with host plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:23575248","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral entry into host cell","termid":"GO:0046596"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of fusion of virus membrane with host plasma membrane","synonyms":[{"name":"regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"regulation of viral envelope fusion","type":"broad"},{"name":"regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"regulation of viral penetration via membrane fusion","type":"exact"},{"name":"regulation of viral-cell fusion molecule activity","type":"related"}],"termid":"GO:1903913"}


id: PBO:0083761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential kinetochore protein; component of the CBF3 complex that binds the CDEIII region of the centromere; contains an N-terminal Zn2Cys6 type zinc finger domain, a C-terminal acidic domain, and a putative coiled coil dimerization domain","termid":"PBO:0083761"}


id: PBO:0056252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL2 antisense RNA 1","termid":"PBO:0056252"}


id: PBO:0074862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 48","termid":"PBO:0074862"}


id: GO:0044102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of deoxyribose exchange between purine deoxyribonucleoside as a donor and purine base as an acceptor.","definition_xrefs":["GOC:jl","PMID:11836245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"purine deoxyribosyltransferase activity","synonyms":[{"name":"PTD","type":"related"},{"name":"purine 2'-deoxyribosyltransferase activity","type":"exact"}],"termid":"GO:0044102"}


id: GO:0047339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hexose 1-phosphate + nucleoside triphosphate = NDP-hexose + diphosphate.","definition_xrefs":["EC:2.7.7.28","MetaCyc:2.7.7.28-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nucleoside-triphosphate-hexose-1-phosphate nucleotidyltransferase activity","secondary_identifiers":["GO:0047340"],"synonyms":[{"name":"NDP hexose pyrophosphorylase activity","type":"related"},{"name":"GDP hexose pyrophosphorylase activity","type":"narrow"},{"name":"GTP:alpha-D-hexose-1-phosphate guanylyltransferase activity","type":"narrow"},{"name":"GTP:hexose-1-phosphate guanylyltransferase activity","type":"narrow"},{"name":"NDP-hexose diphosphorylase activity","type":"exact"},{"name":"NDP-hexose pyrophosphorylase activity","type":"exact"},{"name":"NTP:alpha-D-aldose-1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"NTP:hexose-1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"guanosine diphosphohexose pyrophosphorylase activity","type":"narrow"},{"name":"hexose 1-phosphate guanylyltransferase activity","type":"related"},{"name":"hexose 1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"hexose nucleotidylating enzyme activity","type":"related"},{"name":"hexose-1-phosphate guanylyltransferase activity","type":"narrow"},{"name":"nucleoside diphosphohexose pyrophosphorylase activity","type":"related"},{"name":"nucleoside-triphosphate-aldose-1-phosphate nucleotidyltransferase activity","type":"related"}],"termid":"GO:0047339"}


id: GO:0046490
data:
  {"annotated_genes":["SJAG_01474","SJAG_04865","SJAG_01187","SJAG_02380","SJAG_03349","SJAG_04307","SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009240"},{"annotations":[84733,92655,90485,111061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[107515,111642],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving isopentenyl diphosphate, an isomer of dimethylallyl diphosphate and the key precursor of all isoprenoids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01474":null,"SJAG_02380":null,"SJAG_03349":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isopentenyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IPP metabolic process","type":"exact"},{"name":"IPP metabolism","type":"exact"},{"name":"isopentenyl diphosphate metabolism","type":"exact"},{"name":"isopentenyl pyrophosphate metabolic process","type":"exact"},{"name":"isopentenyl pyrophosphate metabolism","type":"exact"}],"termid":"GO:0046490","terms_by_termid":{"GO:0009240":null,"GO:0019287":null,"GO:2001211":null}}


id: SO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a chromoplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chromoplast_sequence","termid":"SO:0000744"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_chromosome","synonyms":[{"name":"chromoplast chromosome","type":"exact"}],"termid":"SO:0000821"}


id: GO:0042976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group to a tyrosine residue of a JAK (Janus Activated Kinase) protein, thereby activating it.","definition_xrefs":["PMID:12479803","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"},{"relation_name":"is_a","term_name":"activation of protein kinase activity","termid":"GO:0032147"},{"relation_name":"part_of","term_name":"positive regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of Janus kinase activity","secondary_identifiers":["GO:0010531","GO:0042977"],"synonyms":[{"name":"activation of JAK protein","type":"exact"},{"name":"activation of JAK protein by tyrosine phosphorylation","type":"exact"},{"name":"activation of JAK1 kinase activity","type":"narrow"},{"name":"activation of JAK1 protein","type":"narrow"},{"name":"activation of JAK2 kinase activity","type":"narrow"},{"name":"activation of JAK2 protein","type":"narrow"},{"name":"positive regulation of JAK protein activity by tyrosine phosphorylation","type":"exact"},{"name":"tyrosine phosphorylation of JAK protein","type":"exact"},{"name":"tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"tyrosine phosphorylation of JAK2 protein","type":"narrow"}],"termid":"GO:0042976"}


id: PBO:0056972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 26b","termid":"PBO:0056972"}


id: GO:0050015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kievitone hydrate = H2O + H+ + kievitone.","definition_xrefs":["EC:4.2.1.95","RHEA:23604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"kievitone hydratase activity","secondary_identifiers":["MetaCyc:KIEVITONE-HYDRATASE-RXN","KEGG_REACTION:R03622"],"synonyms":[{"name":"KHase activity","type":"related"},{"name":"kievitone-hydrate hydro-lyase (kievitone-forming)","type":"related"},{"name":"kievitone-hydrate hydro-lyase activity","type":"related"}],"termid":"GO:0050015"}


id: GO:0035777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric distal tubule over time, from its formation to the mature structure. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","PMID:18787069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule development","termid":"GO:0039020"},{"relation_name":"is_a","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric distal tubule development","termid":"GO:0035777"}


id: PBO:0073675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein delta","termid":"PBO:0073675"}


id: GO:0018882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-camphor, a bicyclic monoterpene ketone which is one of the major components in the leaves of common sage. Camphor exists in two enantiomers, but the (+)-isomer is more widely distributed.","definition_xrefs":["UM-BBD_pathwayID:cam"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"(+)-camphor metabolic process","synonyms":[{"name":"(+)-camphor metabolism","type":"exact"},{"name":"camphor metabolic process","type":"exact"},{"name":"camphor metabolism","type":"exact"}],"termid":"GO:0018882"}


id: GO:0086018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from an SA node cardiomyocyte to an atrial cardiomyocyte.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"SA node cell to atrial cardiac muscle cell communication","termid":"GO:0086070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"SA node cell to atrial cardiac muscle cell signaling","synonyms":[{"name":"SA node cardiac muscle cell to atrial cardiac muscle cell signalling","type":"exact"},{"name":"SA node cardiomyocyte to atrial cardiomyocyte signalling","type":"exact"},{"name":"SAN cardiomyocyte to atrial cardiomyocyte signalling","type":"exact"},{"name":"sinoatrial node cardiomyocyte to atrial cardiomyocyte signalling","type":"exact"},{"name":"sinus node cardiomyocyte to atrial cardiomyocyte signalling","type":"narrow"}],"termid":"GO:0086018"}


id: FYECO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with ammonium as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, ammonium nitrogen source","termid":"FYECO:0000254"}


id: GO:0004560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-L-fucoside + H2O = an alcohol + L-fucose.","definition_xrefs":["EC:3.2.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosidase activity","termid":"GO:0015928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"alpha-L-fucosidase activity","secondary_identifiers":["MetaCyc:ALPHA-L-FUCOSIDASE-RXN","Reactome:R-HSA-5693807","RHEA:12288"],"synonyms":[{"name":"alpha-L-fucoside fucohydrolase activity","type":"related"},{"name":"alpha-fucosidase activity","type":"related"}],"termid":"GO:0004560"}


id: PBO:0061844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OIP5 antisense RNA 1","termid":"PBO:0061844"}


id: GO:0008920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a lipopolysaccharide + ADP-L-glycero-beta-D-manno-heptose = a heptosylated lipopolysaccharide + ADP + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"lipopolysaccharide heptosyltransferase activity","synonyms":[{"name":"LPS heptosyltransferase activity","type":"exact"}],"termid":"GO:0008920"}


id: GO:0102589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-(6-O-malonyl-beta-D-glucoside) + malonyl-CoA(5-) = cyanidin 3-O-(3''', 6''-O-dimalonyl-beta-glucopyranoside) + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 3'',6''-O-dimalonyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15336"],"termid":"GO:0102589"}


id: PBO:0031500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_pH","termid":"PBO:0031500"}


id: PBO:0050172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 28","termid":"PBO:0050172"}


id: PBO:0076576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 4","termid":"PBO:0076576"}


id: FYECO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bleomycin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ bleomycin","termid":"FYECO:0000277"}


id: GO:0071954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 11 (CCL11, also known as eotaxin-1) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:9600955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 11 production","synonyms":[{"name":"C-C motif chemokine 11 production","type":"exact"},{"name":"CCL-11 production","type":"exact"},{"name":"CCL11 production","type":"exact"},{"name":"eotaxin production","type":"broad"},{"name":"eotaxin-1 production","type":"exact"}],"termid":"GO:0071954"}


id: GO:0042379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chemokine receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"},{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"chemokine receptor binding","synonyms":[{"name":"chemokine receptor ligand","type":"narrow"}],"termid":"GO:0042379"}


id: PBO:0057336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 522","termid":"PBO:0057336"}


id: PBO:0002854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I upstream activation factor complex subunit Rrn5","termid":"PBO:0002854"}


id: PBO:0079204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSR2 ribosome maturation factor","termid":"PBO:0079204"}


id: PBO:0088999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi to plasma membrane transport protein","termid":"PBO:0088999"}


id: PBO:0073437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 6","termid":"PBO:0073437"}


id: PBO:0053489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 466","termid":"PBO:0053489"}


id: GO:0002881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chronic inflammatory response","termid":"GO:0002677"},{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002880"},{"relation_name":"negatively_regulates","term_name":"chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chronic inflammatory response to non-antigenic stimulus","synonyms":[{"name":"down regulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"down-regulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"downregulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"inhibition of chronic inflammatory response to non-antigenic stimulus","type":"narrow"}],"termid":"GO:0002881"}


id: PBO:0045429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like C-mannosyltransferase 1","termid":"PBO:0045429"}


id: PBO:0086617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YNL115C is not an essential gene","termid":"PBO:0086617"}


id: FYPO:0005335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through mitotic cell cycle arrest at the mitotic G2/M phase transition occurs abnormally when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:26804466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose starvation","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose deprivation","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose limitation","type":"related"},{"name":"abnormal cell cycle arrest in mitotic G2 phase during glucose depletion","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition during glucose starvation","type":"exact"},{"name":"abolished mitotic G2/M phase transition during glucose starvation","type":"related"}],"termid":"FYPO:0005335"}


id: PBO:0083875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein that regulates pheromone-dependent morphogenesis; interacts with Sgt1p via a Leucine-Rich Repeat (LRR) domain","termid":"PBO:0083875"}


id: PBO:0031789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_fusion_during_conjugation","termid":"PBO:0031789"}


id: PBO:0047743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 7","termid":"PBO:0047743"}


id: PBO:0017714
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF1","termid":"PBO:0017714"}


id: PBO:0055943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 52","termid":"PBO:0055943"}


id: PBO:0041110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 3","termid":"PBO:0041110"}


id: GO:0060974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that contribute to the formation of the heart. The initial heart structure is made up of mesoderm-derived heart progenitor cells and neural crest-derived cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"heart formation","termid":"GO:0060914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart formation","termid":"GO:0060974"}


id: FYPO:0008200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a lower extent than normal at the centromere inner repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at centromere inner repeat during vegetative growth","termid":"FYPO:0008200"}


id: PBO:0038752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2","termid":"PBO:0038752"}


id: FYPO:0003552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of an RNA catabolic process is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process","termid":"FYPO:0003551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"decreased RNA catabolic process","synonyms":[{"name":"decreased RNA breakdown","type":"exact"},{"name":"decreased RNA catabolism","type":"exact"},{"name":"decreased RNA degradation","type":"exact"},{"name":"reduced RNA catabolic process","type":"exact"}],"termid":"FYPO:0003552"}


id: GO:0046226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of coumarins, compounds derived from the phenylacrylic skeleton of cinnamic acids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin metabolic process","termid":"GO:0009804"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"coumarin catabolic process","synonyms":[{"name":"coumarin breakdown","type":"exact"},{"name":"coumarin catabolism","type":"exact"},{"name":"coumarin degradation","type":"exact"}],"termid":"GO:0046226"}


id: GO:0052179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving pectin in the cell wall of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host cell wall pectin (obsolete GO:0052179)","synonyms":[{"name":"metabolism by organism of cell wall pectin in other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0052179"}


id: SO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of immunoglobulin sequence, either constant or variable.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"immunoglobulin_region","synonyms":[{"name":"immunoglobulin region","type":"exact"}],"termid":"SO:0001832"}


id: GO:1900321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltotetraose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"maltotetraose transport","termid":"GO:2001099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of maltotetraose transport","termid":"GO:1900321"}


id: PBO:0084484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis specific DNA helicase; involved in the conversion of double-stranded breaks to later recombination intermediates and in crossover control; catalyzes the unwinding of Holliday junctions; has ssDNA and dsDNA stimulated ATPase activity","termid":"PBO:0084484"}


id: MOD:01691
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-(12-ketomyristoyl)-L-cysteine.","definition_xrefs":["RESID:AA0517","PubMed:19053188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-(12-ketomyristoyl)-L-cysteine","synonyms":[{"name":"2-(12-oxotetradecanoyl)amino-3-sulfanylpropanoic acid","type":"exact"},{"name":"LIPID N-(12-oxomyristoyl)cysteine","type":"exact"},{"name":"N-(12-ketomyristoyl)-L-cysteine","type":"exact"},{"name":"N-(12-oxotetradecanoyl)cysteine","type":"exact"}],"termid":"MOD:01691"}


id: GO:0048142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The four rounds of incomplete mitosis undergone by a cystoblast to form a 16-cell cyst of interconnected cells within a germarium. Within the cyst, one cell differentiates into an oocyte while the rest become nurse cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","PMID:11131529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystoblast division","termid":"GO:0007282"},{"relation_name":"part_of","term_name":"germarium-derived female germ-line cyst formation","termid":"GO:0030727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived cystoblast division","synonyms":[{"name":"germarium-derived cystoblast cell division","type":"exact"}],"termid":"GO:0048142"}


id: GO:1990232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of phosphomannomutase activity.","definition_xrefs":["GOC:bhm","PMID:16540464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase complex","termid":"GO:1990233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"phosphomannomutase complex","synonyms":[{"name":"PMM-1 complex","type":"narrow"},{"name":"PMM-1 dimer","type":"narrow"},{"name":"PMM-2 complex","type":"narrow"},{"name":"PMM-2 dimer","type":"narrow"}],"termid":"GO:1990232"}


id: GO:1903492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aspirin (acetylsalicylate) stimulus. Aspirin is a non-steroidal anti-inflammatory drug with moA cyclooxygenase inhibitor activity.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23392654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acetylsalicylate","termid":"GO:1903492"}


id: PBO:0048817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5B","termid":"PBO:0048817"}


id: PBO:0062181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 2","termid":"PBO:0062181"}


id: GO:0032617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The appearance of interleukin-14 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 production (obsolete GO:0032617)","synonyms":[{"name":"IL-14 production","type":"exact"},{"name":"interleukin-14 biosynthetic process","type":"narrow"},{"name":"interleukin-14 secretion","type":"narrow"}],"termid":"GO:0032617"}


id: SO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000292 repetitive_element (obsolete SO:0000292)","termid":"SO:0000292"}


id: GO:0102043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isopentenyl phosphate(2-) + ATP(4-) = isopentenyl diphosphate(3-) + ADP(3-).","definition_xrefs":["RHEA:33963","PMID:19928876","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"isopentenyl phosphate kinase activity","secondary_identifiers":["MetaCyc:RXN-10068","EC:2.7.4.26"],"termid":"GO:0102043"}


id: GO:0050036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonate + NAD+ = 3-dehydro-L-threonate + H+ + NADH.","definition_xrefs":["RHEA:23376","EC:1.1.1.129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-threonate 3-dehydrogenase activity","secondary_identifiers":["MetaCyc:L-THREONATE-3-DEHYDROGENASE-RXN","KEGG_REACTION:R03733"],"synonyms":[{"name":"L-threonate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"L-threonic acid dehydrogenase activity","type":"related"},{"name":"threonate dehydrogenase activity","type":"related"}],"termid":"GO:0050036"}


id: GO:0033034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"positively_regulates","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid cell apoptotic process","synonyms":[{"name":"activation of myeloid cell apoptosis","type":"narrow"},{"name":"positive regulation of myeloid cell apoptosis","type":"narrow"},{"name":"stimulation of myeloid cell apoptosis","type":"narrow"},{"name":"up regulation of myeloid cell apoptosis","type":"exact"},{"name":"up-regulation of myeloid cell apoptosis","type":"exact"},{"name":"upregulation of myeloid cell apoptosis","type":"exact"}],"termid":"GO:0033034"}


id: GO:0015914
data:
  {"annotated_genes":["SJAG_02957","SJAG_03746","SJAG_01095","SJAG_04734","SJAG_01945","SJAG_03851","SJAG_00018","SJAG_06440","SJAG_03416","SJAG_03172","SJAG_01229","SJAG_00669","SJAG_00589","SJAG_05209","SJAG_02897","SJAG_03050","SJAG_01225","SJAG_01305","SJAG_16459","SJAG_00587","SJAG_03710","SJAG_01731","SJAG_05268","SJAG_02132","SJAG_00576","SJAG_02943","SJAG_03721","SJAG_03338","SJAG_04370","SJAG_03741","SJAG_02114","SJAG_01470","SJAG_00230","SJAG_02516","SJAG_02581","SJAG_03209"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60911,64465,93621],"is_not":false,"summary":null,"term":"GO:0015914"},{"annotations":[67825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[93620,101961,103776,100159,105656,112415,85261,102854,97366,104779,86930,103648,93559,94706,96607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[86543,101194,86549,95553,98432,86545,101641,105642,108642,86550,86548,97368,86546,96271,86551,93999,94134,90465,86547,86544,98311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[92686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03209":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phospholipid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015914","terms_by_termid":{"GO:0015914":null,"GO:0017121":null,"GO:0045332":null,"GO:0120010":null,"GO:0140331":null}}


id: PBO:0065339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prune exopolyphosphatase 1","termid":"PBO:0065339"}


id: GO:0021579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the medulla oblongata is generated and organized. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0838580343","GOC:dgh","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata morphogenesis","synonyms":[{"name":"medulla morphogenesis","type":"related"},{"name":"myelencephalon morphogenesis","type":"related"}],"termid":"GO:0021579"}


id: GO:2000856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mineralocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of corticosteroid hormone secretion","termid":"GO:2000847"},{"relation_name":"is_a","term_name":"regulation of mineralocorticoid secretion","termid":"GO:2000855"},{"relation_name":"negatively_regulates","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of mineralocorticoid secretion","termid":"GO:2000856"}


id: PBO:0043470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 7 pseudogene 2","termid":"PBO:0043470"}


id: GO:0031708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an endothelin B receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"endothelin B receptor binding","synonyms":[{"name":"endothelin B receptor ligand","type":"narrow"}],"termid":"GO:0031708"}


id: PBO:0085262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Permease identified in lager brewing yeast strain Weihenstephan Nr.34; also in RM11-1a, but not S288C; subject to nitrogen catabolite repression and post-translational control, cellular localization dependent on nitrogen source quality","termid":"PBO:0085262"}


id: PBO:0042280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCZ1 pseudogene 1","termid":"PBO:0042280"}


id: GO:1904445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of Sertoli cell barrier.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18057314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of establishment of Sertoli cell barrier","termid":"GO:1904444"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"establishment of Sertoli cell barrier","termid":"GO:0097368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of Sertoli cell barrier","synonyms":[{"name":"down regulation of establishment of BTB","type":"exact"},{"name":"down regulation of establishment of SCB","type":"exact"},{"name":"down regulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"down regulation of establishment of blood-testis barrier","type":"exact"},{"name":"down-regulation of establishment of BTB","type":"exact"},{"name":"down-regulation of establishment of SCB","type":"exact"},{"name":"down-regulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"down-regulation of establishment of blood-testis barrier","type":"exact"},{"name":"downregulation of establishment of BTB","type":"exact"},{"name":"downregulation of establishment of SCB","type":"exact"},{"name":"downregulation of establishment of Sertoli cell barrier","type":"exact"},{"name":"downregulation of establishment of blood-testis barrier","type":"exact"},{"name":"inhibition of establishment of BTB","type":"narrow"},{"name":"inhibition of establishment of SCB","type":"narrow"},{"name":"inhibition of establishment of Sertoli cell barrier","type":"narrow"},{"name":"inhibition of establishment of blood-testis barrier","type":"narrow"},{"name":"negative regulation of establishment of BTB","type":"exact"},{"name":"negative regulation of establishment of SCB","type":"exact"},{"name":"negative regulation of establishment of blood-testis barrier","type":"exact"}],"termid":"GO:1904445"}


id: GO:0018246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a linkage between a protein amino acid and coenzyme A.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-coenzyme A linkage","termid":"GO:0018246"}


id: PBO:0028299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0028299"}


id: PBO:0062778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 7 pseudogene","termid":"PBO:0062778"}


id: PBO:0066196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 15","termid":"PBO:0066196"}


id: FYPO:0007764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which lipid droplets are larger than normal, and are surrounded by endoplasmic reticulum. Fewer droplets than normal may be present.","definition_xrefs":["PMID:25318672","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lipid droplet morphology","termid":"FYPO:0000356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"enlarged lipid droplets surrounded by endoplasmic reticulum","references_by_uniquename":{"PMID:25318672":null},"synonyms":[{"name":"enlarged lipid droplets surrounded by ER","type":"exact"},{"name":"enlarged lipid droplets surrounded by endoplasmic reticulum during mitotic cell cycle","type":"related"},{"name":"enlarged lipid droplets surrounded by endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"large lipid droplets surrounded by endoplasmic reticulum","type":"exact"}],"termid":"FYPO:0007764"}


id: GO:1904892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor signaling via STAT.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:rjd","PMID:24587195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor signaling pathway via STAT","synonyms":[{"name":"regulation of STAT signalling pathway","type":"exact"},{"name":"regulation of kinase activated-STAT cascade","type":"exact"},{"name":"regulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904892"}


id: PBO:0074152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E1 pseudogene 1","termid":"PBO:0074152"}


id: GO:1903204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of oxidative stress-induced neuron death.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:24252804","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of oxidative stress-induced neuron death (obsolete GO:1903204)","synonyms":[{"name":"down regulation of neuron death in response to oxidative stress","type":"exact"},{"name":"down regulation of neuronal cell death in response to oxidative stress","type":"exact"},{"name":"down regulation of oxidative stress-induced neuron death","type":"exact"},{"name":"down-regulation of neuron death in response to oxidative stress","type":"exact"},{"name":"down-regulation of neuronal cell death in response to oxidative stress","type":"exact"},{"name":"down-regulation of oxidative stress-induced neuron death","type":"exact"},{"name":"downregulation of neuron death in response to oxidative stress","type":"exact"},{"name":"downregulation of neuronal cell death in response to oxidative stress","type":"exact"},{"name":"downregulation of oxidative stress-induced neuron death","type":"exact"},{"name":"inhibition of neuron death in response to oxidative stress","type":"narrow"},{"name":"inhibition of neuronal cell death in response to oxidative stress","type":"narrow"},{"name":"inhibition of oxidative stress-induced neuron death","type":"narrow"},{"name":"negative regulation of neuronal cell death in response to oxidative stress","type":"exact"},{"name":"neuronal protection under oxidative stress","type":"related"},{"name":"neuroprotection against oxidative stress","type":"related"}],"termid":"GO:1903204"}


id: PBO:0047280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCD2 pseudogene 2","termid":"PBO:0047280"}


id: PBO:0111438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar proton/calcium exchanger Vcx1","termid":"PBO:0111438"}


id: GO:0062110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA recombinase complex disassembly, the disaggregation of a DNA recombinase complex into its constituent components.","definition_xrefs":["PMID:30297419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"regulation of DNA recombinase disassembly","termid":"GO:0062109"},{"relation_name":"negatively_regulates","term_name":"DNA recombinase disassembly","termid":"GO:1990986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA recombinase disassembly","termid":"GO:0062110"}


id: PBO:0081442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 299, pseudogene","termid":"PBO:0081442"}


id: PBO:0013061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous Pmf1 factor 1, isoleucine biosynthesis protein (predicted)","termid":"PBO:0013061"}


id: GO:0072686
data:
  {"annotated_genes":["SJAG_05205","SJAG_00883","SJAG_02608","SJAG_00840","SJAG_01429","SJAG_05313","SJAG_03569","SJAG_00082","SJAG_00879","SJAG_01849","SJAG_04940","SJAG_00697","SJAG_03540","SJAG_03911","SJAG_04931","SJAG_00207","SJAG_01297","SJAG_01634","SJAG_05315","SJAG_04074","SJAG_00762","SJAG_01110","SJAG_02821","SJAG_04464","SJAG_03437","SJAG_05266","SJAG_04623","SJAG_02336","SJAG_01211","SJAG_01909","SJAG_01232","SJAG_01832","SJAG_01887","SJAG_00163","SJAG_02209","SJAG_02807","SJAG_04140","SJAG_01371","SJAG_01837","SJAG_00692","SJAG_02045","SJAG_04607","SJAG_01775","SJAG_00514","SJAG_03901","SJAG_01546","SJAG_02248","SJAG_03345","SJAG_00646","SJAG_02695","SJAG_05319","SJAG_03073","SJAG_00773","SJAG_03846","SJAG_03062","SJAG_00930","SJAG_01805","SJAG_00918","SJAG_04745","SJAG_02460","SJAG_01557","SJAG_02311","SJAG_00800","SJAG_01613","SJAG_00943","SJAG_03731","SJAG_02761","SJAG_03116","SJAG_04412","SJAG_03592","SJAG_00526","SJAG_00666","SJAG_03048","SJAG_03387","SJAG_02542","SJAG_00723","SJAG_00140","SJAG_02266","SJAG_03906","SJAG_01330","SJAG_03959","SJAG_00724","SJAG_04257","SJAG_02025","SJAG_00245","SJAG_02098","SJAG_04841","SJAG_04010","SJAG_02624","SJAG_01224","SJAG_04884","SJAG_01391"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74495,83627,84033,84321,85174,85320,85390,85642,85773,85891,86018,87334,87748,88773,88951,89828,89976,91252,91596,91935,92090,92329,92528,92830,93345,93448,94455,94690,95293,95717,95906,95907,96214,96452,96598,96613,98444,98540,98998,99152,99828,100001,100371,102089,102275,102327,103355,103875,104218,104375,104828,105013,105155,105225,105341,105880,106025,106037,106701,107328,107583,107642,107649,107826,108040,108078,109561,110694,110840,111162,111222,113746,114310,114826,114862],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[99649,87401,104376,100002],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061673"},{"annotations":[93040],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[103626],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990941"},{"annotations":[102428,97506,114827,96453],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990498"},{"annotations":[108041,111313,112841,97507,91811,93346,113747,90805,100003,86019,97132,114863,85288,107149,87402,87002,99650,85652,96614,89829,87944,104377,98445,99770,107329],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990023"},{"annotations":[95294,94691,114311,103627],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990537"},{"annotations":[114312,96454],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097431"}]},"cv_name":"cellular_component","definition":"A spindle that forms as part of mitosis. Mitotic and meiotic spindles contain distinctive complements of proteins associated with microtubules.","definition_xrefs":["GOC:vw","PMID:11408572","PMID:18367542","PMID:8027178","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle","termid":"GO:0005819"}],"gene_count":92,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00140":null,"SJAG_00163":null,"SJAG_00207":null,"SJAG_00245":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00692":null,"SJAG_00697":null,"SJAG_00723":null,"SJAG_00724":null,"SJAG_00762":null,"SJAG_00773":null,"SJAG_00800":null,"SJAG_00840":null,"SJAG_00879":null,"SJAG_00883":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_00943":null,"SJAG_01110":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01232":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01371":null,"SJAG_01391":null,"SJAG_01429":null,"SJAG_01546":null,"SJAG_01557":null,"SJAG_01613":null,"SJAG_01634":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01832":null,"SJAG_01837":null,"SJAG_01849":null,"SJAG_01887":null,"SJAG_01909":null,"SJAG_02025":null,"SJAG_02045":null,"SJAG_02098":null,"SJAG_02209":null,"SJAG_02248":null,"SJAG_02266":null,"SJAG_02311":null,"SJAG_02336":null,"SJAG_02460":null,"SJAG_02542":null,"SJAG_02608":null,"SJAG_02624":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_02807":null,"SJAG_02821":null,"SJAG_03048":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03345":null,"SJAG_03387":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03569":null,"SJAG_03592":null,"SJAG_03731":null,"SJAG_03846":null,"SJAG_03901":null,"SJAG_03906":null,"SJAG_03911":null,"SJAG_03959":null,"SJAG_04010":null,"SJAG_04074":null,"SJAG_04140":null,"SJAG_04257":null,"SJAG_04412":null,"SJAG_04464":null,"SJAG_04607":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_04931":null,"SJAG_04940":null,"SJAG_05205":null,"SJAG_05266":null,"SJAG_05313":null,"SJAG_05315":null,"SJAG_05319":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"mitotic spindle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0072686","terms_by_termid":{"GO:0061673":null,"GO:0072686":null,"GO:0097431":null,"GO:1905721":null,"GO:1990023":null,"GO:1990498":null,"GO:1990537":null,"GO:1990941":null}}


id: PBO:0090494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex WD repeat subunit Crb3","termid":"PBO:0090494"}


id: GO:0047425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-1-pyrroline-2-carboxylate + H2O + H+ = 2,5-dioxopentanoate + NH4.","definition_xrefs":["RHEA:10560","EC:3.5.4.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"1-pyrroline-4-hydroxy-2-carboxylate deaminase activity","secondary_identifiers":["KEGG_REACTION:R02280","MetaCyc:3.5.4.22-RXN"],"synonyms":[{"name":"1-pyrroline-4-hydroxy-2-carboxylate aminohydrolase (decyclizing)","type":"related"},{"name":"HPC deaminase activity","type":"related"}],"termid":"GO:0047425"}


id: PBO:0049021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 3","termid":"PBO:0049021"}


id: PBO:0052316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1143","termid":"PBO:0052316"}


id: MOD:01604
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 4x(15)N labeled L-arginine.","definition_xrefs":["URL:http://www.sigmaaldrich.com/catalog/ProductDetail.do?N4=600113|ALDRICH&N5=SEARCH_CONCAT_PNO|BRAND_KEY&F=SPEC&lang=en_US0.000000E+000","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(15)N labeled L-arginine","termid":"MOD:01604"}


id: GO:0002717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte mediated immunity","termid":"GO:0002708"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated immunity","secondary_identifiers":["GO:0045846"],"synonyms":[{"name":"activation of natural killer cell mediated immunity","type":"narrow"},{"name":"positive regulation of NK cell activity","type":"related"},{"name":"positive regulation of NK cell mediated immunity","type":"exact"},{"name":"positive regulation of natural killer cell activity","type":"related"},{"name":"stimulation of natural killer cell mediated immunity","type":"narrow"},{"name":"up regulation of natural killer cell mediated immunity","type":"exact"},{"name":"up-regulation of natural killer cell mediated immunity","type":"exact"},{"name":"upregulation of natural killer cell mediated immunity","type":"exact"}],"termid":"GO:0002717"}


id: PBO:0088147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; imports large neutral amino acids into the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088147"}


id: PBO:0039960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 3","termid":"PBO:0039960"}


id: PBO:0074430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 30","termid":"PBO:0074430"}


id: GO:0102735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoyl-CoA + 3 malonyl-CoA + 3 H+ = 2,4,6-trihydroxybenzophenone + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["GOC:pz","RHEA:35143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"trihydroxybenzophenone synthase activity","secondary_identifiers":["MetaCyc:RXN-7481","EC:2.3.1.220"],"termid":"GO:0102735"}


id: PBO:0060505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 5","termid":"PBO:0060505"}


id: PBO:0048059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 8","termid":"PBO:0048059"}


id: PBO:0090259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable element related protein","termid":"PBO:0090259"}


id: PBO:0062390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 11 pseudogene","termid":"PBO:0062390"}


id: GO:0016200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuronal cell in a multicellular organism recognizes chemoattractant signals from, and grows towards, potential targets.","definition_xrefs":["ISBN:0878932437","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"synaptic target recognition","termid":"GO:0008039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptic target attraction","termid":"GO:0016200"}


id: PBO:0029358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_dGTP_level","termid":"PBO:0029358"}


id: GO:0016475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the size of the nucleus with respect to its cytoplasm is sensed by a cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to endogenous stimulus","termid":"GO:0071495"},{"relation_name":"part_of","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of nuclear:cytoplasmic ratio","synonyms":[{"name":"interpretation of nuclear:cytoplasmic ratio","type":"exact"},{"name":"sensing of nuclear:cytoplasmic ratio","type":"exact"}],"termid":"GO:0016475"}


id: PR:O94257
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine carboxyl methyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03792","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.08c","secondary_identifiers":["UniProtKB:O94257"],"synonyms":[{"name":"Spom972h-LCMT1","type":"exact"},{"name":"[Phosphatase 2A protein]-leucine-carboxy methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein phosphatase methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94257"}


id: PBO:0075668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 3","termid":"PBO:0075668"}


id: GO:0030446
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell wall surrounding a fungal hypha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall","termid":"GO:0009277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"hyphal cell wall","termid":"GO:0030446"}


id: GO:0047680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anilide + H2O = a carboxylate + aniline + H+.","definition_xrefs":["RHEA:20297","EC:3.5.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"aryl-acylamidase activity","secondary_identifiers":["MetaCyc:ARYL-ACYLAMIDASE-RXN","KEGG_REACTION:R01862"],"synonyms":[{"name":"AAA-1","type":"related"},{"name":"AAA-2","type":"related"},{"name":"aryl-acylamide amidohydrolase activity","type":"related"},{"name":"brain acetylcholinesterase (is associated with AAA-2)","type":"related"},{"name":"pseudocholinesterase (associated with arylacylamidase)","type":"related"}],"termid":"GO:0047680"}


id: GO:0070346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"positively_regulates","term_name":"fat cell proliferation","termid":"GO:0070341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fat cell proliferation","synonyms":[{"name":"activation of fat cell proliferation","type":"narrow"},{"name":"positive regulation of adipocyte proliferation","type":"exact"},{"name":"positive regulation of adipose cell proliferation","type":"exact"},{"name":"stimulation of fat cell proliferation","type":"narrow"},{"name":"up regulation of fat cell proliferation","type":"exact"},{"name":"up-regulation of fat cell proliferation","type":"exact"},{"name":"upregulation of fat cell proliferation","type":"exact"}],"termid":"GO:0070346"}


id: FYPO:0006817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K14 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K14 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K14 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006817"}


id: PBO:0053520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 513","termid":"PBO:0053520"}


id: PR:O13853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- its3 gene.","definition_xrefs":["UniProtKB:O13853","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-phosphate 5-kinase its3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.14","synonyms":[{"name":"1-phosphatidylinositol 4-phosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIP5K (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns(4)P-5-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-its3","type":"exact"},{"name":"diphosphoinositide kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13853"}


id: PR:Q9P3B1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1565.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3B1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho GTPase-activating protein C1565.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.02c","synonyms":[{"name":"Spom972h-SPAC1565.02c","type":"exact"}],"termid":"PR:Q9P3B1"}


id: GO:1990801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation that is involved in mitotic spindle assembly.","definition_xrefs":["GOC:TermGenie","PMID:21558801","GOC:rb","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in mitotic spindle assembly (obsolete GO:1990801)","synonyms":[{"name":"protein amino acid phosphorylation involved in mitotic spindle assembly","type":"exact"},{"name":"protein amino acid phosphorylation involved in spindle assembly involved in mitosis","type":"exact"},{"name":"protein phosphorylation involved in spindle assembly involved in mitosis","type":"exact"}],"termid":"GO:1990801"}


id: PR:Q09184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferation-associated protein 2G4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00642","PANTHER:PTHR10804:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved DNA-binding protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.09","secondary_identifiers":["UniProtKB:Q09184"],"synonyms":[{"name":"42 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PA2G4","type":"exact"}],"termid":"PR:Q09184"}


id: GO:1901639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of XDP.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete XDP catabolic process (obsolete GO:1901639)","synonyms":[{"name":"XDP breakdown","type":"exact"},{"name":"XDP catabolism","type":"exact"},{"name":"XDP degradation","type":"exact"}],"termid":"GO:1901639"}


id: GO:0050531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(alpha-D-mannosyl)-3-phosphoglycerate + H2O = 2-(alpha-D-mannosyl)-D-glycerate + phosphate.","definition_xrefs":["EC:3.1.3.70","RHEA:19309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mannosyl-3-phosphoglycerate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R05790","MetaCyc:3.1.3.70-RXN"],"synonyms":[{"name":"alpha-D-mannosyl-3-phosphoglycerate phosphohydrolase activity","type":"related"}],"termid":"GO:0050531"}


id: CHEBI:16708
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine","termid":"CHEBI:16708"}


id: PBO:0060393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 2A","termid":"PBO:0060393"}


id: PR:Q10243
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 26B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12233:SF1","OMA:SCHPO00942","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.13c","secondary_identifiers":["UniProtKB:Q10243"],"synonyms":[{"name":"Spom972h-VPS26B","type":"exact"}],"termid":"PR:Q10243"}


id: FYPO:0005769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal in regions containing G-quartet (G4) motifs. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:25471935","PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at G4 motif during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at G-quadruplex during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at G-quartet during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at G4 motif during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005769"}


id: PBO:0073336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 12","termid":"PBO:0073336"}


id: PBO:0078866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 1","termid":"PBO:0078866"}


id: GO:0046238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of phthalate, any ester or salt of phthalic acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete phthalate biosynthetic process (obsolete GO:0046238)","synonyms":[{"name":"phthalate anabolism","type":"exact"},{"name":"phthalate biosynthesis","type":"exact"},{"name":"phthalate biosynthetic process","type":"exact"},{"name":"phthalate formation","type":"exact"},{"name":"phthalate synthesis","type":"exact"}],"termid":"GO:0046238"}


id: PBO:0047823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O3B","termid":"PBO:0047823"}


id: GO:2000580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP-dependent microtubule motor activity, plus-end-directed.","definition_xrefs":["GOC:kmv","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule motor activity, plus-end-directed (obsolete GO:2000580)","synonyms":[{"name":"regulation of ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"regulation of kinesin ATP phosphohydrolase (plus-end-directed)","type":"exact"},{"name":"regulation of kinesin activity","type":"related"},{"name":"regulation of plus-end-directed kinesin ATPase activity","type":"exact"},{"name":"regulation of plus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000580"}


id: GO:0030162
data:
  {"annotated_genes":["SJAG_01544","SJAG_01528","SJAG_00052","SJAG_02244","SJAG_00475","SJAG_01489","SJAG_00766","SJAG_01131","SJAG_01210","SJAG_00077","SJAG_00712","SJAG_00071","SJAG_02485","SJAG_03699","SJAG_03048","SJAG_00642","SJAG_02723","SJAG_04477"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[95948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[86431,103071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[84979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[60790,67402,67734,65000,66205,66468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[107861,113250,98478,102770,105023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[85989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045862"},{"annotations":[76393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061136"},{"annotations":[110783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00077":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01528":null,"SJAG_01544":null,"SJAG_02244":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of proteolysis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"regulation of peptidolysis","type":"exact"}],"termid":"GO:0030162","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:0045862":null,"GO:0061136":null,"GO:1901800":null,"GO:1904293":null,"GO:1905785":null,"GO:1905786":null}}


id: PATO:0000273
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reproductive quality inhering in an organism or population by virtue of the bearer's potential reproductive capacity ad measured by the number of gametes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Fecundity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive quality","termid":"PATO:0001434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fecundity","termid":"PATO:0000273"}


id: GO:0005884
data:
  {"annotated_genes":["SJAG_03088","SJAG_03145","SJAG_02566","SJAG_01993","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91327,97830,101251,105186,110473],"is_not":false,"summary":null,"term":"GO:0005884"}]},"cv_name":"cellular_component","definition":"A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.","definition_xrefs":["PMID:10666339","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric cytoskeletal fiber","termid":"GO:0099513"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01993":null,"SJAG_02566":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actin filament","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Actin","FMA:63850","NIF_Subcellular:sao1588493326"],"synonyms":[{"name":"microfilament","type":"exact"}],"termid":"GO:0005884","terms_by_termid":{"GO:0005884":null}}


id: GO:1902339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:sart","PMID:12202035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"activation of apoptosis involved in development","type":"related"},{"name":"activation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"activation of apoptotic process involved in morphogenesis","type":"narrow"},{"name":"activation of morphogenetic apoptosis","type":"related"},{"name":"positive regulation of apoptosis involved in development","type":"related"},{"name":"positive regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"positive regulation of morphogenetic apoptosis","type":"related"},{"name":"up regulation of apoptosis involved in development","type":"related"},{"name":"up regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"up regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"up regulation of morphogenetic apoptosis","type":"related"},{"name":"up-regulation of apoptosis involved in development","type":"related"},{"name":"up-regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"up-regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"up-regulation of morphogenetic apoptosis","type":"related"},{"name":"upregulation of apoptosis involved in development","type":"related"},{"name":"upregulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"upregulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"upregulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902339"}


id: PBO:0067949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 251","termid":"PBO:0067949"}


id: PR:O13999
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug155 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 155 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.04c","synonyms":[{"name":"Spom972h-mug155","type":"exact"}],"termid":"PR:O13999"}


id: GO:0005899
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A disulfide-bonded, heterotetrameric receptor complex. The alpha chains are entirely extracellular, while each beta chain has one transmembrane domain. The ligand binds to the alpha subunit extracellular domain and the kinase is associated with the beta subunit intracellular domain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"},{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"insulin receptor complex","termid":"GO:0005899"}


id: PR:P87174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dpb4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.09","synonyms":[{"name":"DNA polymerase II subunit D (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dpb4","type":"exact"}],"termid":"PR:P87174"}


id: MOD:01336
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE - identical and redundant with MOD:00657. Remap to MOD:00657.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01336 deamidation followed by a methylation -site Q (obsolete MOD:01336)","synonyms":[{"name":"Deamidation followed by a methylation","type":"related"},{"name":"Methyl+Deamidated","type":"related"}],"termid":"MOD:01336"}


id: GO:0033258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving plastid DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"plastid DNA metabolic process","synonyms":[{"name":"plastid DNA metabolism","type":"exact"}],"termid":"GO:0033258"}


id: PBO:0074781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3 pseudogene 4","termid":"PBO:0074781"}


id: PBO:0055467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2900","termid":"PBO:0055467"}


id: GO:1900573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emodin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"emodin metabolic process","synonyms":[{"name":"emodin metabolism","type":"exact"}],"termid":"GO:1900573"}


id: GO:0086017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a Purkinje myocyte.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"},{"relation_name":"part_of","term_name":"Purkinje myocyte to ventricular cardiac muscle cell signaling","termid":"GO:0086029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Purkinje myocyte action potential","termid":"GO:0086017"}


id: GO:1903058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of melanosome organization.","definition_xrefs":["PMID:24769727","GOC:rl","GOC:BHF","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of melanosome organization","termid":"GO:1903056"},{"relation_name":"positively_regulates","term_name":"melanosome organization","termid":"GO:0032438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of melanosome organization","synonyms":[{"name":"activation of melanosome organisation","type":"narrow"},{"name":"activation of melanosome organization","type":"narrow"},{"name":"activation of melanosome organization and biogenesis","type":"related"},{"name":"positive regulation of melanosome organisation","type":"exact"},{"name":"positive regulation of melanosome organization and biogenesis","type":"related"},{"name":"up regulation of melanosome organisation","type":"exact"},{"name":"up regulation of melanosome organization","type":"exact"},{"name":"up regulation of melanosome organization and biogenesis","type":"related"},{"name":"up-regulation of melanosome organisation","type":"exact"},{"name":"up-regulation of melanosome organization","type":"exact"},{"name":"up-regulation of melanosome organization and biogenesis","type":"related"},{"name":"upregulation of melanosome organisation","type":"exact"},{"name":"upregulation of melanosome organization","type":"exact"},{"name":"upregulation of melanosome organization and biogenesis","type":"related"}],"termid":"GO:1903058"}


id: PBO:0062868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 5","termid":"PBO:0062868"}


id: GO:1904978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosome organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:pad","GOC:PARL","PMID:22511594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"endosome organization","termid":"GO:0007032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endosome organization","synonyms":[{"name":"regulation of endosome organisation","type":"exact"},{"name":"regulation of endosome organization and biogenesis","type":"related"}],"termid":"GO:1904978"}


id: PR:P78797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC70.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized proline-rich protein C70.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.10","synonyms":[{"name":"Spom972h-SPCC70.10","type":"exact"}],"termid":"PR:P78797"}


id: PBO:0041525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 86","termid":"PBO:0041525"}


id: PBO:0062445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 110 pseudogene","termid":"PBO:0062445"}


id: PR:O43088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rba50 gene.","definition_xrefs":["UniProtKB:O43088","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II-associated protein rba50 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.13","synonyms":[{"name":"Spom972h-rba50","type":"exact"}],"termid":"PR:O43088"}


id: FYPO:0004101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation. Although one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated, mitotic sister chromatid segregation does eventually go on to complete separation of chromosomes.","definition_xrefs":["PMID:17561805","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lagging mitotic chromosomes","termid":"FYPO:0000228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0000337","FYPO:0005447"],"is_obsolete":false,"name":"lagging mitotic chromosomes, with complete sister chromatid separation","synonyms":[{"name":"chromosome segregation defects, lagging mitotic chromosomes, with complete sister chromatid separation","type":"exact"},{"name":"lagging chromosomes, with complete sister chromatid separation during mitotic cell cycle","type":"related"},{"name":"lagging chromosomes, with complete sister chromatid separation, during vegetative growth","type":"exact"},{"name":"lagging mitotic chromosomes, with complete chromosome separation","type":"exact"},{"name":"lagging mitotic sister chromatids, with complete sister chromatid separation","type":"exact"}],"termid":"FYPO:0004101"}


id: PBO:0046467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ES cell expressed Ras","termid":"PBO:0046467"}


id: GO:0047995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(4-hydroxyphenyl)lactate + NAD+ = 3-(4-hydroxyphenyl)pyruvate + NADH.","definition_xrefs":["RHEA:10780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxyphenylpyruvate reductase activity","secondary_identifiers":["MetaCyc:HYDROXYPHENYLPYRUVATE-REDUCTASE-RXN","EC:1.1.1.237"],"synonyms":[{"name":"4-hydroxyphenyllactate:NAD+ oxidoreductase activity","type":"related"},{"name":"HPRP","type":"related"}],"termid":"GO:0047995"}


id: GO:0044782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:cilia","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium organization","synonyms":[{"name":"microtubule-based flagellum organization","type":"exact"}],"termid":"GO:0044782"}


id: PBO:0070898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 6","termid":"PBO:0070898"}


id: GO:0046911
data:
  {"annotated_genes":["SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89345],"is_not":false,"summary":null,"term":"GO:0046911"}]},"cv_name":"molecular_function","definition":"The formation of bonds from two or more atoms within the same ligand to a metal atom in complexes in which the metal is part of a ring.","definition_xrefs":["ISBN:0198506732","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"metal chelating activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heavy metal chelation","type":"narrow"},{"name":"metal chelation","type":"exact"}],"termid":"GO:0046911","terms_by_termid":{"GO:0046911":null}}


id: GO:0004015
data:
  {"annotated_genes":["SJAG_00673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75011],"is_not":false,"summary":null,"term":"GO:0004015"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-amino-7-oxononanoate + S-adenosyl-L-methionine(1+) = 7,8-diaminononanoate + S-adenosyl-4-methylthio-2-oxobutanoate.","definition_xrefs":["RHEA:16861","EC:2.6.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"adenosylmethionine-8-amino-7-oxononanoate transaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R03231","MetaCyc:DAPASYN-RXN"],"synonyms":[{"name":"DAPA transaminase activity","type":"related"},{"name":"7,8-diamino-pelargonic acid aminotransferase activity","type":"related"},{"name":"7,8-diaminonanoate transaminase activity","type":"related"},{"name":"7,8-diaminononanoate aminotransferase activity","type":"related"},{"name":"7,8-diaminononanoate transaminase activity","type":"related"},{"name":"7,8-diaminopelargonic acid aminotransferase activity","type":"related"},{"name":"7-keto-8-aminopelargonic acid","type":"related"},{"name":"7-keto-8-aminopelargonic acid aminotransferase activity","type":"related"},{"name":"DAPA aminotransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:8-amino-7-oxononanoate aminotransferase activity","type":"related"},{"name":"adenosyl methionine-8-amino-7-oxononanoate transaminase activity","type":"exact"},{"name":"adenosylmethionine--8-amino-7-oxononanoate aminotransferase activity","type":"related"},{"name":"adenosylmethionine-8-amino-7-oxononanoate aminotransferase activity","type":"exact"},{"name":"diaminopelargonate synthase activity","type":"related"}],"termid":"GO:0004015","terms_by_termid":{"GO:0004015":null}}


id: GO:0033769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 2-dimethylallyl-(6aS,11aS)-3,6a,9-trihydroxypterocarpan + NADPH + H+ + O2 = glyceollin II or glyceollin III + NADP+ + 2 H2O, and 4-dimethylallyl-(6aS,11aS)-3,6a,9-trihydroxypterocarpan + NADPH + H+ + O2 = glyceollin I + NADP+ + 2 H2O.","definition_xrefs":["EC:1.14.14.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glyceollin synthase activity","synonyms":[{"name":"dimethylallyl-3,6a,9-trihydroxypterocarpan cyclase activity","type":"exact"}],"termid":"GO:0033769"}


id: PBO:0042106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 179","termid":"PBO:0042106"}


id: PBO:0078526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16 like","termid":"PBO:0078526"}


id: GO:0061318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a renal filtration cell. Renal filtration cells are specialized cells of the renal system that filter fluids by charge, size or both. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal filtration cell differentiation","termid":"GO:0061318"}


id: PR:O14351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An L-xylulose reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C30D10.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.05c","secondary_identifiers":["UniProtKB:O14351"],"synonyms":[{"name":"Spom972h-DCXR","type":"exact"}],"termid":"PR:O14351"}


id: PBO:0076235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 4","termid":"PBO:0076235"}


id: SO:0100001
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a peptide that is involved in a biochemical function.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_motif","termid":"SO:0001067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"biochemical_region_of_peptide","synonyms":[{"name":"biochemical motif","type":"exact"},{"name":"biochemical region of peptide","type":"exact"},{"name":"biochemical_region","type":"related"}],"termid":"SO:0100001"}


id: GO:0016117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid biosynthetic process","termid":"GO:0016109"},{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"carotenoid biosynthetic process","secondary_identifiers":["MetaCyc:CAROTENOID-PWY"],"synonyms":[{"name":"carotenoid anabolism","type":"exact"},{"name":"carotenoid biosynthesis","type":"exact"},{"name":"carotenoid formation","type":"exact"},{"name":"carotenoid synthesis","type":"exact"}],"termid":"GO:0016117"}


id: FYECO:0000450
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which miconazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ miconazole","termid":"FYECO:0000450"}


id: GO:0046444
data:
  {"annotated_genes":["SJAG_04845","SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110269],"is_not":false,"summary":null,"term":"GO:0046444"},{"annotations":[111894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving FMN, riboflavin 5'-(dihydrogen phosphate), a coenzyme for a number of oxidative enzymes including NADH dehydrogenase.","definition_xrefs":["PMID:20822113","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside monophosphate metabolic process","termid":"GO:0009161"},{"relation_name":"is_a","term_name":"ribonucleotide metabolic process","termid":"GO:0009259"},{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01937":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"FMN metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FMN metabolism","type":"exact"}],"termid":"GO:0046444","terms_by_termid":{"GO:0009398":null,"GO:0046444":null}}


