# terms

id: FYPO:0004404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing JM216 (also called satraplatin).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on JM216","synonyms":[{"name":"normal cell population growth in presence of JM216","type":"exact"},{"name":"normal cell population growth on JM216","type":"exact"},{"name":"normal cell population growth on satraplatin","type":"exact"},{"name":"normal cellular response to JM216","type":"related"},{"name":"normal vegetative cell population growth on JM216","type":"exact"}],"termid":"FYPO:0004404"}


id: GO:0003437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication that contributes to the shaping of the growth plate cartilage.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"part_of","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication involved in growth plate cartilage morphogenesis","termid":"GO:0003437"}


id: GO:0080162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of auxins from endoplasmic reticulum to cytosol.","definition_xrefs":["PMID:19506555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"auxin transport","termid":"GO:0060918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum to cytosol auxin transport","synonyms":[{"name":"intracellular auxin transport","type":"broad"}],"termid":"GO:0080162"}


id: PR:Q92350
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcd1 gene.","definition_xrefs":["UniProtKB:Q92350","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase C6G9.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.05","synonyms":[{"name":"Spom972h-pcd1","type":"exact"}],"termid":"PR:Q92350"}


id: PR:000027566
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha phosphorylated 2 in Schizosaccharomyces pombe. Example: UniProtKB:P04909-1, Ser-122, MOD:00046.","definition_xrefs":["PMID:19965387","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","termid":"PR:P04909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hta1/Phos(S121)","pombase_gene_id":"SPCC622.08c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2A-alpha phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hta1/Phos:2","type":"exact"},{"name":"histone H2A.1 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"hta1/Phos(S121)","type":"exact"},{"name":"hta1/Phos:(S122)","type":"exact"}],"termid":"PR:000027566"}


id: PBO:0071724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 22","termid":"PBO:0071724"}


id: PBO:0047463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 4","termid":"PBO:0047463"}


id: PBO:0027483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_cadmium-induced_proteins_during_G0","termid":"PBO:0027483"}


id: PATO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physiological state which is characterized by periods of high-frequency high amplitude electrical activity in neuronal tissue.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physiological state","termid":"PATO:0001912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ictal","termid":"PATO:0001913"}


id: PBO:0080378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS9D1 antisense RNA 1","termid":"PBO:0080378"}


id: GO:1902824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of late endosome to lysosome transport.","definition_xrefs":["GOC:PARL","PMID:23949442","GOC:TermGenie","GO_REF:0000058","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of late endosome to lysosome transport","termid":"GO:1902822"},{"relation_name":"is_a","term_name":"positive regulation of vacuolar transport","termid":"GO:1903337"},{"relation_name":"positively_regulates","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of late endosome to lysosome transport","synonyms":[{"name":"activation of late endosome to lysosome transport","type":"narrow"},{"name":"up regulation of late endosome to lysosome transport","type":"exact"},{"name":"up-regulation of late endosome to lysosome transport","type":"exact"},{"name":"upregulation of late endosome to lysosome transport","type":"exact"}],"termid":"GO:1902824"}


id: FYPO:0000793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal glycerol dehydrogenase activity","termid":"FYPO:0000793"}


id: GO:0002553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a mast cell or group of mast cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"histamine secretion by mast cell","termid":"GO:0002553"}


id: SO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of polynucleotide sequence produced by digestion with a restriction endonuclease.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_fragment","secondary_identifiers":["http://en.wikipedia.org/wiki/Restriction_fragment"],"synonyms":[{"name":"restriction fragment","type":"exact"}],"termid":"SO:0000412"}


id: PBO:0061474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal cell adhesion molecule","termid":"PBO:0061474"}


id: RO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has end sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"is_subsequence_of","termid":"RO:0002525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_end_sequence_of","termid":"RO:0002519"}


id: MOD:00391
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-octanoyl-L-threonine.","definition_xrefs":["Unimod:426#T","PubMed:11546772","RESID:AA0386","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-octanoylated residue","termid":"MOD:00669"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-octanoyl-L-threonine","synonyms":[{"name":"(2S)-2-amino-3-(octanoyloxy)butanoic acid","type":"exact"},{"name":"L-threonine octanoate ester","type":"exact"},{"name":"LIPID O-octanoyl threonine","type":"exact"},{"name":"O-octanoyl-L-threonine","type":"exact"},{"name":"O-octanoylated L-threonine","type":"exact"},{"name":"O3-octanoyl-L-threonine","type":"exact"},{"name":"OOctThr","type":"exact"},{"name":"Octanoyl","type":"related"},{"name":"octanoyl","type":"related"}],"termid":"MOD:00391"}


id: PBO:0057533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 649","termid":"PBO:0057533"}


id: PBO:0077267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 9","termid":"PBO:0077267"}


id: FYPO:0005964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of lithium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal lithium import","synonyms":[{"name":"abnormal cellular lithium import","type":"exact"},{"name":"abnormal lithium import during mitotic cell cycle","type":"related"},{"name":"abnormal lithium import during vegetative growth","type":"exact"},{"name":"abnormal lithium import into cell","type":"exact"},{"name":"abnormal lithium ion import","type":"exact"}],"termid":"FYPO:0005964"}


id: GO:0102522
data:
  {"annotated_genes":["SJAG_04735"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94143],"is_not":false,"summary":null,"term":"GO:0102522"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 4-demethylwyosine37 in tRNAPhe = 5'-S-methyl-5'-thioadenosine + H+ + 7-[(3S)-3-amino-3-carboxypropyl]-4-demethylwyosine37 in tRNAPhe.","definition_xrefs":["GOC:pz","EC:2.5.1.114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04735":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14518","RHEA:36355"],"termid":"GO:0102522","terms_by_termid":{"GO:0102522":null}}


id: PBO:0004638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron sulfur cluster assembly protein Isd11 (predicted)","termid":"PBO:0004638"}


id: PBO:0084909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitogen-activated protein kinase involved in osmoregulation; controls global reallocation of RNAPII during osmotic shock; mediates recruitment/activation of RNAPII at Hot1p-dependent promoters; binds calmodulin; stimulates antisense transcription to activate CDC28; defines novel S-phase checkpoint with Mrc1p that prevent replication/transcription conflicts; nuclear form represses pseudohyphal growth; autophosphorylates; protein abundance increases under DNA replication stress","termid":"PBO:0084909"}


id: PBO:0028900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0028900"}


id: PBO:0069377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 637, pseudogene","termid":"PBO:0069377"}


id: PBO:0039583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 2","termid":"PBO:0039583"}


id: PATO:0001182
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001182 relative response (obsolete PATO:0001182)","termid":"PATO:0001182"}


id: PBO:0017932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein Mep33","termid":"PBO:0017932"}


id: PATO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000554 cold sensitive (obsolete PATO:0000554)","termid":"PATO:0000554"}


id: PBO:0068032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 337","termid":"PBO:0068032"}


id: _global:directly_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p directly regulates q iff p is immediately causally upstream of q and p regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"_global:immediately_causally_upstream_of"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulates","secondary_identifiers":["RO:0002578"],"termid":"_global:directly_regulates"}


id: PBO:0079660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 8","termid":"PBO:0079660"}


id: PBO:0074947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111","termid":"PBO:0074947"}


id: PBO:0027171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_during_mitosis","termid":"PBO:0027171"}


id: GO:0005749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain.","definition_xrefs":["ISBN:0198547684","GOC:vw","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (obsolete GO:0005749)","synonyms":[{"name":"mitochondrial fumarate reductase complex","type":"exact"}],"termid":"GO:0005749"}


id: GO:0003404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the formation and shaping of the optic vesicle. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"embryonic camera-type eye morphogenesis","termid":"GO:0048596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic vesicle morphogenesis","termid":"GO:0003404"}


id: PBO:0090887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic serine-tRNA ligase Srs1","termid":"PBO:0090887"}


id: GO:1900722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein adenylylation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein adenylylation","termid":"GO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein adenylylation","synonyms":[{"name":"regulation of protein AMPylation","type":"exact"},{"name":"regulation of protein adenylation","type":"exact"},{"name":"regulation of protein amino acid adenylylation","type":"exact"}],"termid":"GO:1900722"}


id: GO:0009138
data:
  {"annotated_genes":["SJAG_04665","SJAG_03676","SJAG_02874","SJAG_04657","SJAG_00779","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[88459,103385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[91538,103386,88460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[114198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[114200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[111740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[110117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine nucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_02874":null,"SJAG_03676":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009138","terms_by_termid":{"GO:0006225":null,"GO:0006227":null,"GO:0006233":null,"GO:0006240":null,"GO:0006256":null,"GO:0046704":null,"GO:0046705":null}}


id: FYPO:0002081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing N-tosyl-L-phenylalanyl chloromethyl ketone (TPCK).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on TPCK","synonyms":[{"name":"normal cell population growth in presence of TPCK","type":"exact"},{"name":"normal cell population growth on N-tosyl-L-phenylalanyl chloromethyl ketone","type":"exact"},{"name":"normal cell population growth on TPCK","type":"exact"},{"name":"normal cellular response to TPCK","type":"related"},{"name":"normal vegetative cell population growth on TPCK","type":"exact"}],"termid":"FYPO:0002081"}


id: PBO:0110357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENR pseudogene 1","termid":"PBO:0110357"}


id: GO:0070806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phialide development, a process that leads to the formation of phialides. Phialides are specialized cells that bud from the ends of metulae on the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of conidiophore development","termid":"GO:0070794"},{"relation_name":"is_a","term_name":"regulation of phialide development","termid":"GO:0070805"},{"relation_name":"negatively_regulates","term_name":"phialide development","termid":"GO:0070790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phialide development","termid":"GO:0070806"}


id: FYPO:0001838
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115438,115442],"is_not":false,"summary":null,"term":"FYPO:0001838"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551"],"single_locus_genotype_uniquenames":["Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck2delta"],"synonyms":[{"name":"decreased protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001838","terms_by_termid":{"FYPO:0001838":null}}


id: PBO:0062469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 160 pseudogene","termid":"PBO:0062469"}


id: PBO:0050671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 6","termid":"PBO:0050671"}


id: PBO:0029137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cordycepin","termid":"PBO:0029137"}


id: FYPO:0004130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of succinate dehydrogenase (ubiquinone) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal succinate dehydrogenase (ubiquinone) activity","termid":"FYPO:0003322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased succinate dehydrogenase (ubiquinone) activity","synonyms":[{"name":"reduced succinate dehydrogenase (ubiquinone) activity","type":"exact"}],"termid":"FYPO:0004130"}


id: GO:0019337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetrachloroethylene, a derivative of ethene with the hydrogen atoms replaced by chlorines.","definition_xrefs":["PMID:8663199","GOC:ai","PMID:7988892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon catabolic process","termid":"GO:0042205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"tetrachloroethylene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:tce2","MetaCyc:PCEDEG-PWY"],"synonyms":[{"name":"tetrachloroethene catabolic process","type":"exact"},{"name":"tetrachloroethene catabolism","type":"exact"},{"name":"tetrachloroethylene breakdown","type":"exact"},{"name":"tetrachloroethylene catabolism","type":"exact"},{"name":"tetrachloroethylene degradation","type":"exact"}],"termid":"GO:0019337"}


id: MOD:01041
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a benzyloxycarbonyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzyloxycarbonyl modified residue","synonyms":[{"name":"Z","type":"exact"}],"termid":"MOD:01041"}


id: PBO:0030008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level","termid":"PBO:0030008"}


id: GO:0004495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + acceptor = mevaldate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase activity (obsolete GO:0004495)","termid":"GO:0004495"}


id: SO:0001996
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region of intronic sequence within 10 bases of an exon.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended_intronic_splice_region","synonyms":[{"name":"extended intronic splice region ","type":"exact"}],"termid":"SO:0001996"}


id: PBO:0088694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32","termid":"PBO:0088694"}


id: GO:0031838
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the stable binding of a haptoglobin to hemoglobin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"haptoglobin-hemoglobin complex","termid":"GO:0031838"}


id: GO:0070471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the uterus. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The uterus is a muscular organ of the female mammal for containing and usually for nourishing the young during development prior to birth.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine smooth muscle contraction","synonyms":[{"name":"myometrial contraction","type":"exact"},{"name":"myometrial smooth muscle contraction","type":"exact"},{"name":"myometrium contraction","type":"exact"}],"termid":"GO:0070471"}


id: GO:0050955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. Thermoception in larger animals is mainly done in the skin; mammals have at least two types of sensor, for detecting heat (temperatures above body temperature) and cold (temperatures below body temperature).","definition_xrefs":["GOC:ai","Wikipedia:Thermoception"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of temperature stimulus","termid":"GO:0050951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermoception","synonyms":[{"name":"thermoreception","type":"exact"}],"termid":"GO:0050955"}


id: PBO:0055211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2636","termid":"PBO:0055211"}


id: FYPO:0005085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at small nuclear RNA (snRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:21151114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at ncRNA gene","termid":"FYPO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin at snRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at snRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at snRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at snRNA gene during vegetative growth","type":"exact"}],"termid":"FYPO:0005085"}


id: PR:Q9UUJ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ned1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear elongation and deformation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.13","synonyms":[{"name":"Spom972h-ned1","type":"exact"}],"termid":"PR:Q9UUJ6"}


id: PBO:0091450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously incorrectly named as mtx1 with MTX1 human ortholog","termid":"PBO:0091450"}


id: SO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of match parts.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000038 match_set (obsolete SO:0000038)","termid":"SO:0000038"}


id: PBO:0083060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrolipoamide acetyltransferase component (E2) of the PDC; the pyruvate dehydrogenase complex (PDC) catalyzes the oxidative decarboxylation of pyruvate to acetyl-CoA; metabolic longevity factor required for calorie restriction-mediated life span extension","termid":"PBO:0083060"}


id: PBO:0048127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 8","termid":"PBO:0048127"}


id: FYPO:0006972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-adenosyl-L-cysteine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular S-adenosyl-L-cysteine level","synonyms":[{"name":"decreased cellular S-adenosyl-L-cysteine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular S-adenosyl-L-cysteine level during vegetative growth","type":"exact"},{"name":"decreased level of S-adenosyl-L-cysteine in cell","type":"exact"},{"name":"reduced cellular S-adenosyl-L-cysteine level","type":"exact"}],"termid":"FYPO:0006972"}


id: FYPO:0001513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid segregation is the entire process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0000070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic sister chromatid segregation","synonyms":[{"name":"normal mitotic chromosome segregation","type":"exact"},{"name":"normal mitotic sister chromatid disjunction","type":"exact"},{"name":"normal mitotic sister chromatid segregation during vegetative growth","type":"exact"},{"name":"normal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001513"}


id: GO:0046158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ocellus pigments, any general or particular coloring matter in living organisms, found or utilized in the ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["GOC:ai","PMID:15176085","PMID:18421706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"pigment metabolic process involved in pigmentation","termid":"GO:0043474"},{"relation_name":"part_of","term_name":"ocellus pigmentation","termid":"GO:0033060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ocellus pigment metabolic process","synonyms":[{"name":"ocellus pigment metabolism","type":"exact"}],"termid":"GO:0046158"}


id: GO:0080136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that enables cells to respond in a more rapid and robust manner than nonprimed cells to much lower levels of a stimulus indicating the organism is under stress.","definition_xrefs":["PMID:19318610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"priming of cellular response to stress","synonyms":[{"name":"priming of response to stress","type":"broad"},{"name":"priming of stress response","type":"broad"}],"termid":"GO:0080136"}


id: PBO:0086023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the YKL050W protein is a target of the SCFCdc4 ubiquitin ligase complex and YKL050W transcription is regulated by Azf1p; YKL050C has a paralog, EIS1, that arose from the whole genome duplication","termid":"PBO:0086023"}


id: GO:0006080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mannan backbone composed of D-mannose unites, substituted with D-glucose and/or D-galactose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"substituted mannan metabolic process","synonyms":[{"name":"substituted mannan metabolism","type":"exact"}],"termid":"GO:0006080"}


id: PBO:0053017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 5","termid":"PBO:0053017"}


id: PBO:0052353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 4C, pseudogene","termid":"PBO:0052353"}


id: PBO:0047868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q32.1)","termid":"PBO:0047868"}


id: PBO:0034603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiosis_II","termid":"PBO:0034603"}


id: FYPO:0001636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular glutamine level","synonyms":[{"name":"normal cellular L-glutamine level","type":"exact"},{"name":"normal cellular glutamine level during mitotic cell cycle","type":"related"},{"name":"normal cellular glutamine level during vegetative growth","type":"exact"},{"name":"normal level of glutamine in cell","type":"exact"}],"termid":"FYPO:0001636"}


id: PBO:0002289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase Imt1","termid":"PBO:0002289"}


id: PBO:0031663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_modification","termid":"PBO:0031663"}


id: GO:0047793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cycloeucalenol = obtusifoliol.","definition_xrefs":["EC:5.5.1.9","RHEA:22800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"cycloeucalenol cycloisomerase activity","secondary_identifiers":["MetaCyc:CYCLOEUCALENOL-CYCLOISOMERASE-RXN","KEGG_REACTION:R03775"],"synonyms":[{"name":"cycloeucalenol lyase (cyclopropane-decyclizing)","type":"related"},{"name":"cycloeucalenol--obtusifoliol isomerase activity","type":"related"},{"name":"cycloeucalenol-obtusifoliol isomerase activity","type":"exact"}],"termid":"GO:0047793"}


id: PBO:0069552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 823, pseudogene","termid":"PBO:0069552"}


id: PBO:0089303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, Ssb2-like","termid":"PBO:0089303"}


id: GO:0102305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate + H2O = (13E)-labda-7,13-dien-15-ol + diphosphate.","definition_xrefs":["RHEA:32075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoric monoester hydrolase activity","termid":"GO:0016794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(13E)-labda-7,13-dien-15-ol synthase activity","secondary_identifiers":["MetaCyc:RXN-12892","EC:3.1.7.10"],"termid":"GO:0102305"}


id: GO:0052892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic (S)-hydroxynitrile = an aromatic aldehyde + cyanide.","definition_xrefs":["RHEA:54660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(S)-hydroxynitrile lyase activity","termid":"GO:0047606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"aromatic (S)-hydroxynitrile lyase activity","secondary_identifiers":["KEGG_REACTION:R09359","MetaCyc:RXN-11732"],"termid":"GO:0052892"}


id: PBO:0028038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_disassembly","termid":"PBO:0028038"}


id: GO:0019616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol via the meta-cleavage pathway, in which the catechol aromatic ring is broken between a hydroxylated carbon atom and an adjacent unsubstituted carbon atom.","definition_xrefs":["GOC:jl","PMID:7765833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol catabolic process, meta-cleavage","secondary_identifiers":["MetaCyc:P183-PWY"],"synonyms":[{"name":"catechol breakdown, meta-cleavage","type":"exact"},{"name":"catechol degradation, meta-cleavage","type":"exact"}],"termid":"GO:0019616"}


id: PATO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000288 relative litter size (obsolete PATO:0000288)","termid":"PATO:0000288"}


id: MOD:00880
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with 6x(13)C labeled 4-sulfophenyl isothiocyanate.","definition_xrefs":["PubMed:16526082","PubMed:15536630","Unimod:464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00584"},{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled 4-sulfophenyl isothiocyanate derivatized residue","synonyms":[{"name":"4-sulfophenyl isothiocyanate (Heavy C13)","type":"related"},{"name":"SPITC:13C(6)","type":"related"}],"termid":"MOD:00880"}


id: SO:0000931
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a guide_RNA that base-pairs to a target mRNA.","definition_xrefs":["SO:jk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guide_RNA_region","termid":"SO:0000930"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anchor_region","synonyms":[{"name":"anchor region","type":"exact"}],"termid":"SO:0000931"}


id: GO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates transport.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transport by transcription from RNA polymerase II promoter (obsolete GO:0100020)","termid":"GO:0100020"}


id: GO:0160196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,polycis-polyprenol + NAD(P) = ditrans,polycis-polyprenal+ NAD(P)H + H+.","definition_xrefs":["PMID:38821050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"polyprenol dehydrogenase activity","termid":"GO:0160196"}


id: SO:0001506
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of sequences (often chromosomes) of an individual.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genome","termid":"SO:0001026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_genome","synonyms":[{"name":"variant genome","type":"related"}],"termid":"SO:0001506"}


id: PBO:0069129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 379, pseudogene","termid":"PBO:0069129"}


id: PBO:0038671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 5","termid":"PBO:0038671"}


id: GO:1901687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutathione derivative.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"glutathione derivative metabolic process","termid":"GO:1901685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione derivative biosynthetic process","synonyms":[{"name":"glutathione derivative anabolism","type":"exact"},{"name":"glutathione derivative biosynthesis","type":"exact"},{"name":"glutathione derivative formation","type":"exact"},{"name":"glutathione derivative synthesis","type":"exact"}],"termid":"GO:1901687"}


id: PBO:0067720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 18","termid":"PBO:0067720"}


id: PBO:0078712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-7","termid":"PBO:0078712"}


id: PBO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClC chloride channel (predicted)","termid":"PBO:0004232"}


id: PBO:0028258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3K9me_binding","termid":"PBO:0028258"}


id: GO:0018283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"},{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"iron incorporation into metallo-sulfur cluster","synonyms":[{"name":"iron incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018283"}


id: GO:0010143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cutin, a waxy substance, which combined with cellulose forms a substance nearly impervious to water and constituting the cuticle in plants.","definition_xrefs":["ISBN:0028623819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"cutin-based cuticle development","termid":"GO:0160062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cutin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-321"],"synonyms":[{"name":"cutin anabolism","type":"exact"},{"name":"cutin biosynthesis","type":"exact"},{"name":"cutin formation","type":"exact"},{"name":"cutin synthesis","type":"exact"}],"termid":"GO:0010143"}


id: FYPO:0007922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cysteine  above normal physiological concentrations. Cells stop growing (and may die) at a concentration of cysteine that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to cysteine","synonyms":[{"name":"sensitive to cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0007922"}


id: GO:1904596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of wound healing connective tissue replacement, which may be replaced with fibrotic material, that occurs as part of an inflammatory response.","definition_xrefs":["PMID:18245812","GOC:TermGenie","GO_REF:0000058","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of connective tissue replacement","termid":"GO:1905203"},{"relation_name":"regulates","term_name":"connective tissue replacement involved in inflammatory response wound healing","termid":"GO:0002248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"regulation of fibrosis during inflammatory response","type":"narrow"}],"termid":"GO:1904596"}


id: GO:1904092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagic cell death.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:25736836","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of autophagic cell death","synonyms":[{"name":"regulation of autophagic death","type":"broad"},{"name":"regulation of programmed cell death by autophagy","type":"broad"},{"name":"regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"regulation of type II programmed cell death","type":"related"}],"termid":"GO:1904092"}


id: PBO:0068299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 5 pseudogene 1","termid":"PBO:0068299"}


id: FYPO:0006770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which kinetochore disassembly is abnormal during prophase of meiosis I. Normally, outer kinetochore components delocalize from the centromere during bouquet formation in meiotic prophase I.","definition_xrefs":["PomBase:mah","PMID:27611693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal kinetochore disassembly during meiotic prophase I","synonyms":[{"name":"abnormal kinetochore disassembly during prophase I","type":"exact"},{"name":"abnormal kinetochore disassembly during prophase of meiosis I","type":"exact"},{"name":"defective kinetochore disassembly during meiotic prophase I","type":"exact"}],"termid":"FYPO:0006770"}


id: GO:0097247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to epigallocatechin 3-gallate, a compound that is a gallic acid ester of a catechin.","definition_xrefs":["GOC:sl","PMID:21307292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"flavonoid binding","termid":"GO:0097243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"epigallocatechin 3-gallate binding","synonyms":[{"name":"EGCG binding","type":"exact"},{"name":"catechin gallate binding","type":"broad"}],"termid":"GO:0097247"}


id: GO:0016988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of binding to a transcription factor and stopping, preventing or reducing the rate of its transcriptional activity.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription initiation factor antagonist activity (obsolete GO:0016988)","synonyms":[{"name":"transcription initiation factor antagonist activity","type":"exact"},{"name":"transcriptional initiation factor antagonist activity","type":"exact"}],"termid":"GO:0016988"}


id: GO:0043588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue.","definition_xrefs":["GOC:jl","UBERON:0002097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skin development","synonyms":[{"name":"animal skin development","type":"exact"}],"termid":"GO:0043588"}


id: GO:2000996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"positive regulation of cell wall polysaccharide catabolic process","termid":"GO:2000968"},{"relation_name":"is_a","term_name":"regulation of mannan catabolic process","termid":"GO:2000994"},{"relation_name":"positively_regulates","term_name":"mannan catabolic process","termid":"GO:0046355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of mannan catabolic process","synonyms":[{"name":"positive regulation of mannan breakdown","type":"exact"},{"name":"positive regulation of mannan catabolism","type":"exact"},{"name":"positive regulation of mannan degradation","type":"exact"}],"termid":"GO:2000996"}


id: PR:Q9Y7I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.20 gene.","definition_xrefs":["UniProtKB:Q9Y7I1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1B3.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.20","synonyms":[{"name":"Spom972h-SPAC1B3.20","type":"exact"}],"termid":"PR:Q9Y7I1"}


id: FYPO:0004714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid import RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Amino acid import RNAs are transcribed from genes whose products are involved in amino acid import into the cell or an organelle.","definition_xrefs":["PomBase:mah","PMID:18203864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of amino acid import gene mRNA during vegetative growth","synonyms":[{"name":"decreased amino acid import gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of amino acid import gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of amino acid import gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of amino acid import gene transcripts during vegetative growth","type":"exact"},{"name":"reduced level of amino acid import gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004714"}


id: GO:0047926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (2S)-bornyl diphosphate.","definition_xrefs":["RHEA:18209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0016853","GO:0009975","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"geranyl-diphosphate cyclase activity","secondary_identifiers":["EC:5.5.1.8","KEGG_REACTION:R02007","MetaCyc:GERANYL-DIPHOSPHATE-CYCLASE-RXN"],"synonyms":[{"name":"(+)-bornyl-diphosphate lyase (decyclizing)","type":"related"},{"name":"(+)-bornylpyrophosphate cyclase activity","type":"related"},{"name":"bornyl diphosphate synthase activity","type":"related"},{"name":"bornyl pyrophosphate synthase activity","type":"related"},{"name":"bornyl pyrophosphate synthetase activity","type":"related"}],"termid":"GO:0047926"}


id: PBO:0062173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 16 pseudogene","termid":"PBO:0062173"}


id: RO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contained_in","termid":"RO:0001018"}


id: PBO:0090194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein, implicated in trancriptional response to stress","termid":"PBO:0090194"}


id: FYPO:0005988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which microtubule anchoring at the cell cortex of the cell tip does not occur during the meiotic cell cycle. Normally, anchoring maintains the localization of microtubules with their plus ends at the cell cortex.","definition_xrefs":["PomBase:mah","PMID:25736293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0000138"],"is_obsolete":false,"name":"abolished microtubule anchoring at cell cortex of cell tip during meiotic cell cycle","synonyms":[{"name":"abolished microtubule anchoring at cell tip cortex during meiotic cell cycle","type":"exact"},{"name":"abolished microtubule cortical anchoring at cell tip during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005988"}


id: GO:0033905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->3)-beta-D-glycosidic linkages in (1->3)-beta-D-xylans.","definition_xrefs":["EC:3.2.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"xylan endo-1,3-beta-xylosidase activity","secondary_identifiers":["MetaCyc:3.2.1.32-RXN"],"synonyms":[{"name":"1,3-beta-D-xylan xylanohydrolase activity","type":"related"},{"name":"1,3-beta-xylanase activity","type":"related"},{"name":"1,3-xylanase activity","type":"related"},{"name":"beta-1,3-xylanase activity","type":"related"},{"name":"endo-1,3-beta-xylanase activity","type":"related"},{"name":"endo-1,3-xylanase activity","type":"related"},{"name":"endo-beta-1,3-xylanase activity","type":"related"},{"name":"xylanase activity","type":"broad"}],"termid":"GO:0033905"}


id: PBO:0068903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 145, pseudogene","termid":"PBO:0068903"}


id: PBO:0029013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029013"}


id: GO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing a cleistothecium, a closed sexual fruiting body that contains ascospores in linear asci. Cleistothecia are present in some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["PMID:30410052","PMID:28889020","PMID:20348388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium formation","termid":"GO:0062248"}


id: PBO:0038798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 3B (pseudogene)","termid":"PBO:0038798"}


id: FYPO:0004618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable astral microtubules.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubules absent from cell","termid":"FYPO:0004702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"astral microtubules absent from cell","synonyms":[{"name":"absent astral microtubules","type":"exact"},{"name":"astral microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"astral microtubules absent from cell during vegetative growth","type":"exact"},{"name":"cytoplasmic astral microtubules absent from cell","type":"exact"}],"termid":"FYPO:0004618"}


id: PATO:0002137
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A readiopacity quality inhering in a bearer by virtue of the bearer's prevention of the passage of electromagnetic radiation.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiopacity","termid":"PATO:0002136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiopaque","termid":"PATO:0002137"}


id: PBO:0031874
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deletion Bleomycin Sensitive","termid":"PBO:0031874"}


id: GO:0043686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of covalently altering one or more amino acids in a protein after translation has begun but before the protein has been released from the ribosome.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"co-translational protein modification","synonyms":[{"name":"co-translational amino acid modification","type":"exact"},{"name":"co-translational modification","type":"exact"},{"name":"cotranslational amino acid modification","type":"exact"},{"name":"cotranslational modification","type":"exact"},{"name":"cotranslational protein modification","type":"exact"}],"termid":"GO:0043686"}


id: GO:0050286
data:
  {"annotated_genes":["SJAG_04964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96351],"is_not":false,"summary":null,"term":"GO:0050286"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucitol 6-phosphate + H2O = D-glucitol + phosphate.","definition_xrefs":["EC:3.1.3.50","RHEA:24580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sorbitol-6-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02866","MetaCyc:SORBITOL-6-PHOSPHATASE-RXN"],"synonyms":[{"name":"sorbitol-6-phosphate phosphatase activity","type":"related"},{"name":"sorbitol-6-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050286","terms_by_termid":{"GO:0050286":null}}


id: GO:1905943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["PMID:19737525","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sprouting of injured axon","termid":"GO:0048688"},{"relation_name":"is_a","term_name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"},{"relation_name":"negatively_regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of growth cone in injured axon","synonyms":[{"name":"down regulation of formation of growth cone in injured axon","type":"exact"},{"name":"down-regulation of formation of growth cone in injured axon","type":"exact"},{"name":"downregulation of formation of growth cone in injured axon","type":"exact"},{"name":"inhibition of formation of growth cone in injured axon","type":"narrow"}],"termid":"GO:1905943"}


id: PBO:0062219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AO member 1 pseudogene","termid":"PBO:0062219"}


id: FYPO:0000491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial genome maintenance does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial genome maintenance","termid":"FYPO:0000490"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitochondrial genome maintenance","synonyms":[{"name":"abolished mitochondrial genome maintenance during mitotic cell cycle","type":"related"},{"name":"absent mitochondrial genome maintenance","type":"exact"},{"name":"mitochondrial genome maintenance abolished","type":"exact"},{"name":"mitochondrial genome maintenance abolished during vegetative growth","type":"exact"},{"name":"mitochondrial genome maintenance: absent","type":"related"}],"termid":"FYPO:0000491"}


id: GO:0038027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by apolipoprotein A-I binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","GOC:signaling","PMID:16443932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"apolipoprotein A-I-mediated signaling pathway","synonyms":[{"name":"apolipoprotein A-I-mediated signalling pathway","type":"exact"}],"termid":"GO:0038027"}


id: GO:2000955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin metabolic process","termid":"GO:2000954"},{"relation_name":"negatively_regulates","term_name":"cyclodextrin metabolic process","termid":"GO:2000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of cyclodextrin metabolic process","synonyms":[{"name":"negative regulation of cyclodextrin metabolism","type":"exact"}],"termid":"GO:2000955"}


id: PBO:0061066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB activating protein","termid":"PBO:0061066"}


id: PBO:0087727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p); this complex forms a channel for passage of secretory proteins through the endoplasmic reticulum membrane, and of the Ssh1p complex (Ssh1p-Sbh2p-Sss1p); interacts with Ost4p and Wbp1p","termid":"PBO:0087727"}


id: FYPO:0007903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell lyses during mitotic interphase, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:val","PMID:19189958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"cell lysis during mitotic interphase","synonyms":[{"name":"cell lysis during NETO","type":"narrow"},{"name":"vegetative cell lysis during interphase","type":"exact"}],"termid":"FYPO:0007903"}


id: SO:0000400
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describes a quality of sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_attribute","synonyms":[{"name":"sequence attribute","type":"exact"}],"termid":"SO:0000400"}


id: PBO:0035808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_multiseptate_vegetative_cell","termid":"PBO:0035808"}


id: PBO:0051665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of CDK, cyclin A1 interacting protein 1","termid":"PBO:0051665"}


id: GO:0009076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of amino acids of the histidine family.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine family amino acid biosynthetic process (obsolete GO:0009076)","synonyms":[{"name":"histidine family amino acid anabolism","type":"exact"},{"name":"histidine family amino acid biosynthesis","type":"exact"},{"name":"histidine family amino acid biosynthetic process","type":"exact"},{"name":"histidine family amino acid formation","type":"exact"},{"name":"histidine family amino acid synthesis","type":"exact"}],"termid":"GO:0009076"}


id: GO:1990186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of lymphatic vessels.","definition_xrefs":["PMID:23897233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"is_a","term_name":"lymphatic vascular process in circulatory system","termid":"GO:1990183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphatic vessel size","synonyms":[{"name":"regulation of collecting lymphatic vessel size","type":"narrow"}],"termid":"GO:1990186"}


id: GO:0015594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + putrescine(out) -> ADP + phosphate + putrescine(in).","definition_xrefs":["EC:7.6.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type polyamine transporter activity","termid":"GO:0015417"},{"relation_name":"is_a","term_name":"putrescine transmembrane transporter activity","termid":"GO:0015489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type putrescine transporter activity","secondary_identifiers":["MetaCyc:ABC-25-RXN","RHEA:29995","EC:7.6.2.16"],"synonyms":[{"name":"ATPase-coupled putrescine transmembrane transporter activity","type":"related"},{"name":"putrescine porter activity","type":"broad"},{"name":"putrescine-importing ATPase activity","type":"narrow"}],"termid":"GO:0015594"}


id: GO:0061807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA recombination at the centromere.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at centromere","termid":"GO:0061806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"positive regulation of DNA recombination at centromere","synonyms":[{"name":"positive regulation of centromeric recombination","type":"exact"}],"termid":"GO:0061807"}


id: GO:0120206
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The distal region of the photoreceptor connecting cilium is structurally unique to the photoreceptor and is maintained by retina-specific protein, SPATA7, and its interacting partners RPGR and RPGRIP1. It is essential for photoreceptor sensory cilium stability.","definition_xrefs":["GOC:krc","PMID:29899041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"photoreceptor connecting cilium","termid":"GO:0032391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor distal connecting cilium","synonyms":[{"name":"DCC","type":"related"},{"name":"photoreceptor DCC","type":"related"}],"termid":"GO:0120206"}


id: PBO:0031700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_fusion_during_mating","termid":"PBO:0031700"}


id: SO:0001252
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A radiation hybrid map is a physical map.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"STS","termid":"SO:0000331"},{"relation_name":"is_a","term_name":"fragment_assembly","termid":"SO:0001249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RH_map","synonyms":[{"name":"RH map","type":"exact"},{"name":"radiation hybrid map","type":"exact"}],"termid":"SO:0001252"}


id: GO:0080009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The posttranscriptional addition of methyl groups to specific residues in an mRNA molecule.","definition_xrefs":["PMID:18505803"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA methylation (obsolete GO:0080009)","termid":"GO:0080009"}


id: GO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ring-shaped structure that forms at the site of cytokinesis in the bud neck of a budding cell; composed of members of the conserved family of filament forming proteins called septins as well as septin-associated proteins. In S. cerevisiae, this structure forms at the time of bud emergence and the septins show a high rate of exchange.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud neck septin structure","termid":"GO:0000399"},{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"cellular bud neck septin ring","termid":"GO:0000144"}


id: SO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recombination signal including J-heptamer, J-spacer and J-nonamer in 5' of J-region of a J-gene or J-sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_gene_recombination_feature","synonyms":[{"name":"J gene recombination feature","type":"exact"},{"name":"J-RS","type":"exact"}],"termid":"SO:0000302"}


id: PBO:0091102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic pumilio family RNA-binding protein Puf5","termid":"PBO:0091102"}


id: GO:1900949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isoprene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of isoprene metabolic process","termid":"GO:1900946"},{"relation_name":"is_a","term_name":"regulation of isoprene biosynthetic process","termid":"GO:1900947"},{"relation_name":"positively_regulates","term_name":"isoprene biosynthetic process","termid":"GO:0043612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of isoprene biosynthetic process","synonyms":[{"name":"activation of 2-methyl-1,3-butadiene biosynthesis","type":"narrow"},{"name":"activation of 2-methyl-1,3-butadiene biosynthetic process","type":"narrow"},{"name":"activation of hemiterpene biosynthesis","type":"narrow"},{"name":"activation of hemiterpene biosynthetic process","type":"narrow"},{"name":"activation of isoprene biosynthetic process","type":"narrow"},{"name":"positive regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"positive regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"positive regulation of hemiterpene biosynthesis","type":"exact"},{"name":"positive regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"up regulation of hemiterpene biosynthesis","type":"exact"},{"name":"up regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"up regulation of isoprene biosynthetic process","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"up-regulation of hemiterpene biosynthesis","type":"exact"},{"name":"up-regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"up-regulation of isoprene biosynthetic process","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"upregulation of hemiterpene biosynthesis","type":"exact"},{"name":"upregulation of hemiterpene biosynthetic process","type":"exact"},{"name":"upregulation of isoprene biosynthetic process","type":"exact"}],"termid":"GO:1900949"}


id: PBO:0062269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily G member 5 pseudogene","termid":"PBO:0062269"}


id: GO:0021658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 3 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:curators","GOC:dph","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 3 development","termid":"GO:0021569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 morphogenesis","termid":"GO:0021658"}


id: FYPO:0004651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a secondary septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased septum thickness","termid":"FYPO:0006900"},{"relation_name":"output_of","term_name":"abnormal secondary cell septum biogenesis","termid":"FYPO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased secondary cell septum thickness","synonyms":[{"name":"decreased secondary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased secondary cell septum thickness during vegetative growth","type":"exact"},{"name":"decreased secondary septum thickness","type":"exact"},{"name":"reduced secondary cell septum thickness","type":"exact"},{"name":"thin secondary septum","type":"exact"}],"termid":"FYPO:0004651"}


id: PBO:0063298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily C, 5","termid":"PBO:0063298"}


id: PATO:0000498
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased duration","secondary_identifiers":["PATO:0000715"],"synonyms":[{"name":"chronic","type":"related"},{"name":"high time","type":"exact"},{"name":"increased period","type":"exact"},{"name":"increased time","type":"exact"},{"name":"prolonged period","type":"related"},{"name":"slow time","type":"related"}],"termid":"PATO:0000498"}


id: PBO:0087204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine decarboxylase; required for the biosynthesis of spermidine and spermine; cells lacking Spe2p require spermine or spermidine for growth in the presence of oxygen but not when grown anaerobically","termid":"PBO:0087204"}


id: GO:0006109
data:
  {"annotated_genes":["SJAG_01376","SJAG_00534","SJAG_03705","SJAG_00963","SJAG_02785","SJAG_02278","SJAG_05314","SJAG_01402","SJAG_04462","SJAG_00685","SJAG_04666","SJAG_05006","SJAG_04771","SJAG_01787","SJAG_00610","SJAG_04668","SJAG_00424","SJAG_04509","SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89007,108032],"is_not":false,"summary":null,"term":"GO:0006109"},{"annotations":[77630,86958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[72076,74894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[88439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060635"},{"annotations":[92638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[85725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[88443,83556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[83930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[98949,101461,86801,114087,88428,88445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[88449,85471,98951,90981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"},{"annotations":[95110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010906"},{"annotations":[85246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[74893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving carbohydrates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"carbohydrate metabolic process","termid":"GO:0005975"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00534":null,"SJAG_00610":null,"SJAG_00685":null,"SJAG_00698":null,"SJAG_00963":null,"SJAG_01376":null,"SJAG_01402":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_02785":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of carbohydrate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of carbohydrate metabolism","type":"exact"}],"termid":"GO:0006109","terms_by_termid":{"GO:0006109":null,"GO:0006110":null,"GO:0010906":null,"GO:0032951":null,"GO:0043456":null,"GO:0045719":null,"GO:0045820":null,"GO:0060635":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null,"GO:1905857":null,"GO:2001172":null}}


id: GO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA exon ligation process that rejoins two exons of a pre-tRNA which has had the intron removed.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exon ligation","termid":"GO:0000378"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA exon ligation","termid":"GO:0000968"}


id: FYPO:0006286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of protein complexes consisting of cyclin B1 and cyclin-dependent kinase 1 (CDK1).","definition_xrefs":["PomBase:mah","PMID:7796804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell morphology","termid":"FYPO:0000672"},{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cyclin B1-CDK1 complex level","synonyms":[{"name":"cyclin B1-CDK1 complexes present at normal level","type":"exact"},{"name":"normal cyclin B1-CDK1 complex level during mitotic cell cycle","type":"related"},{"name":"normal cyclin B1-CDK1 complex level during vegetative growth","type":"exact"}],"termid":"FYPO:0006286"}


id: PBO:0034040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_positively_regulates","termid":"PBO:0034040"}


id: GO:0047005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 16-alpha-hydroxysteroid = NADPH + H+ + 16-oxosteroid.","definition_xrefs":["EC:1.1.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"16-alpha-hydroxysteroid dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:1.1.1.147-RXN"],"synonyms":[{"name":"16alpha-hydroxy steroid dehydrogenase activity","type":"related"},{"name":"16alpha-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"16alpha-hydroxysteroid:NAD(P)+ 16-oxidoreductase activity","type":"related"}],"termid":"GO:0047005"}


id: PBO:0067509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 649, pseudogene","termid":"PBO:0067509"}


id: GO:0000730
data:
  {"annotated_genes":["SJAG_02708","SJAG_00757","SJAG_01708","SJAG_02267","SJAG_02079","SJAG_01410","SJAG_03221","SJAG_04530"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88695,92228,95133,96626,98285,103787,106432],"is_not":false,"summary":null,"term":"GO:0000730"},{"annotations":[92985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[103792,106438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) into higher order oligomers on single-stranded DNA.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"is_a","term_name":"DNA repair complex assembly","termid":"GO:0090735"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0065003","GO:0006281","GO:0006259","GO:0044085"],"is_obsolete":false,"name":"DNA recombinase assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Rad51 nucleoprotein filament formation","type":"exact"}],"termid":"GO:0000730","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null}}


id: PBO:0063197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 19","termid":"PBO:0063197"}


id: PBO:0075646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY4 antisense RNA 1","termid":"PBO:0075646"}


id: GO:0102351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-aminobutyric acid + 2-oxo monocarboxylic acid anion = 4-oxobutanoate + glycine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-aminobutyrate transaminase (glyoxylate dependent) activity (obsolete GO:0102351)","termid":"GO:0102351"}


id: PBO:0011447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec3","termid":"PBO:0011447"}


id: GO:0019852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"L-ascorbic acid metabolic process","synonyms":[{"name":"L-ascorbic acid metabolism","type":"exact"},{"name":"ascorbate metabolic process","type":"exact"},{"name":"ascorbate metabolism","type":"exact"},{"name":"vitamin C metabolic process","type":"exact"},{"name":"vitamin C metabolism","type":"exact"}],"termid":"GO:0019852"}


id: GO:0021825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where neuronal precursors migrate tangentially in the cerebral cortex, primarily guided through physical cell-cell interactions.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cell migration","termid":"GO:0006929"},{"relation_name":"is_a","term_name":"cerebral cortex tangential migration","termid":"GO:0021800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}


id: GO:0043876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-threonine (or D-allo-threonine) = glycine + acetaldehyde.","definition_xrefs":["MetaCyc:4.1.2.42-RXN","PMID:9642221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"D-threonine aldolase activity","secondary_identifiers":["EC:4.1.2.42"],"synonyms":[{"name":"D-TA","type":"exact"},{"name":"D-allo-TA","type":"exact"},{"name":"D-allo-threonine aldolase activity","type":"exact"},{"name":"DtaAS","type":"related"},{"name":"low-specificity D-threonine aldolase","type":"narrow"}],"termid":"GO:0043876"}


id: PBO:0082209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,3-mannosyltransferase; integral membrane glycoprotein of the Golgi complex, required for addition of alpha1,3-mannose linkages to N-linked and O-linked oligosaccharides, one of five S. cerevisiae proteins of the MNN1 family","termid":"PBO:0082209"}


id: FYPO:0005343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased during anaphase B.","definition_xrefs":["PMID:19686686","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0000054","FYPO:0001320","FYPO:0000337","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of mitotic spindle elongation during anaphase B","synonyms":[{"name":"decreased rate of mitotic spindle elongation during anaphase B during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic spindle elongation during mitotic anaphase B","type":"exact"},{"name":"decreased rate of mitotic spindle extension during anaphase B","type":"exact"},{"name":"decreased rate of spindle elongation during anaphase B of mitosis","type":"exact"},{"name":"reduced rate of mitotic spindle elongation during anaphase B","type":"exact"}],"termid":"FYPO:0005343"}


id: GO:0072304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the metanephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900211"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis","termid":"GO:0072309"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in metanephric nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis","type":"exact"}],"termid":"GO:0072304"}


id: GO:0006188
data:
  {"annotated_genes":["SJAG_01081","SJAG_04123","SJAG_03140","SJAG_02364","SJAG_02850","SJAG_04681","SJAG_06634","SJAG_01661","SJAG_03355","SJAG_01814"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115158],"is_not":false,"summary":null,"term":"GO:0006188"},{"annotations":[115157,99527,93873,113529,95652,106497,106385,110659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[89795,97899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"IMP metabolic process","termid":"GO:0046040"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"IMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IMP anabolism","type":"exact"},{"name":"IMP biosynthesis","type":"exact"},{"name":"IMP formation","type":"exact"},{"name":"IMP synthesis","type":"exact"}],"termid":"GO:0006188","terms_by_termid":{"GO:0006188":null,"GO:0006189":null,"GO:0032264":null}}


id: PBO:0051371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-25 (pseudogene)","termid":"PBO:0051371"}


id: GO:1903674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cap-dependent translational initiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"regulates","term_name":"cap-dependent translational initiation","termid":"GO:0002191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0002181","GO:0010467"],"is_obsolete":false,"name":"regulation of cap-dependent translational initiation","termid":"GO:1903674"}


id: PBO:0054296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1687","termid":"PBO:0054296"}


id: PBO:0045078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP4 antisense RNA 1","termid":"PBO:0045078"}


id: GO:2000031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salicylic acid mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of salicylic acid mediated signaling pathway","synonyms":[{"name":"regulation of salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:2000031"}


id: PBO:0088072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease component of the SAGA acetylation complex; required for SAGA (Spt-Ada-Gcn5-Acetyltransferase)-mediated deubiquitination of histone H2B","termid":"PBO:0088072"}


id: GO:0034123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor signaling pathway","synonyms":[{"name":"positive regulation of TLR signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034123"}


id: GO:0046042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ITP, inosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009206"},{"relation_name":"is_a","term_name":"ITP metabolic process","termid":"GO:0046041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ITP biosynthetic process","synonyms":[{"name":"ITP anabolism","type":"exact"},{"name":"ITP biosynthesis","type":"exact"},{"name":"ITP formation","type":"exact"},{"name":"ITP synthesis","type":"exact"}],"termid":"GO:0046042"}


id: PBO:0070451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 8","termid":"PBO:0070451"}


id: GO:0047486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the eliminative degradation of polysaccharides containing 1,4-beta-D-hexosaminyl and 1,3-beta-D-glucuronosyl or 1,3-alpha-L-iduronosyl linkages to disaccharides containing 4-deoxy-beta-D-gluc-4-enuronosyl groups.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin ABC lyase activity (obsolete GO:0047486)","termid":"GO:0047486"}


id: PBO:0060655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 4","termid":"PBO:0060655"}


id: PBO:0049952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIF1AP pseudogene 1","termid":"PBO:0049952"}


id: MOD:01858
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(N-acetylamino)glucosyl-L-cysteine.","definition_xrefs":["PubMed:21395300","RESID:AA0560","PubMed:21251913","ChEBI:61631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycosylated residue","termid":"MOD:00426"},{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"S-(N-acetylamino)glucosyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(2-acetamido-2-deoxy-beta-D-glucopyranosylsulfanyl)propanoic acid","type":"exact"},{"name":"CARBOHYD S-linked (GlcNAc) cysteine","type":"exact"},{"name":"S-(N-acetylamino)glucosyl-L-cysteine","type":"exact"},{"name":"S-[(N-acetylamino)glycosyl]cysteine","type":"exact"},{"name":"S-[beta-D-(N-acetylamino)glucopyranosyl]cysteine","type":"exact"}],"termid":"MOD:01858"}


id: GO:0106281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chenodeoxycholate + NAD+ = 7-oxolithocholate + H+ + NADH.","definition_xrefs":["PMID:12917011","RHEA:42036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"chenodeoxycholate 7-alpha-dehydrogenase (NAD+) activity","termid":"GO:0106281"}


id: GO:0051607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a virus that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to virus","termid":"GO:0009615"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to virus","synonyms":[{"name":"antiviral response","type":"exact"},{"name":"defence response to virus","type":"exact"},{"name":"defense response to viruses","type":"exact"}],"termid":"GO:0051607"}


id: GO:0086051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the Purkinje myocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:dph","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"Purkinje myocyte action potential","termid":"GO:0086017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during Purkinje myocyte action potential","termid":"GO:0086051"}


id: GO:0043955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypropionate + ATP + CoA = 3-hydroxypropionyl-CoA + AMP + diphosphate.","definition_xrefs":["GOC:jl","PMID:11821399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"3-hydroxypropionyl-CoA synthetase activity","secondary_identifiers":["EC:6.2.1.36","RHEA:26534"],"synonyms":[{"name":"3-hydroxy propionyl-CoA synthetase activity","type":"exact"},{"name":"AMP-dependent synthetase and ligase","type":"broad"},{"name":"AMP-dependent synthetase and ligase:Enoyl-CoA hydratase/isomerase","type":"broad"},{"name":"acetyl-coenzyme A synthetase","type":"broad"},{"name":"acetyl-coenzyme A synthetase/GroES-like domain","type":"narrow"},{"name":"enoyl-CoA hydratase/isomerase","type":"broad"}],"termid":"GO:0043955"}


id: PBO:0038477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 17, pseudogene","termid":"PBO:0038477"}


id: PR:O13761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A2.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A2.11, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.11","synonyms":[{"name":"Spom972h-SPAC17A2.11","type":"exact"}],"termid":"PR:O13761"}


id: MOD:00582
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 6x(13)C,2x(15)N labeled L-lysine.","definition_xrefs":["PubMed:12716131","Unimod:259","OMSSA:181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,2x(15)N labeled L-lysine","synonyms":[{"name":"13C(6) 15N(2) Silac label","type":"related"},{"name":"Label:13C(6)15N(2)","type":"related"},{"name":"lys-13C615N2","type":"exact"}],"termid":"MOD:00582"}


id: GO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of serotonin following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:16730260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serotonin production involved in inflammatory response","synonyms":[{"name":"serotonin production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002351"}


id: PBO:0080104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP15 small subunit processome component","termid":"PBO:0080104"}


id: PBO:0039987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 1 pseudogene 1","termid":"PBO:0039987"}


id: PBO:0057270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 494","termid":"PBO:0057270"}


id: PBO:0051662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"InaF motif containing 2","termid":"PBO:0051662"}


id: GO:0006734
data:
  {"annotated_genes":["SJAG_06622","SJAG_03091","SJAG_02796","SJAG_00839","SJAG_04334","SJAG_03828","SJAG_01539","SJAG_00409","SJAG_06621","SJAG_01012","SJAG_03903","SJAG_02135","SJAG_04152","SJAG_04495","SJAG_02369","SJAG_00461","SJAG_00605","SJAG_02945","SJAG_02107","SJAG_04192","SJAG_00027","SJAG_03373","SJAG_01310","SJAG_03660","SJAG_02009"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101227],"is_not":false,"summary":null,"term":"GO:0006734"},{"annotations":[100580,101574,105061,105060,91058,90567,99491,105057,105524,105526,112522,94066,105522,105062,105523,105525,94346,99753,101573,101575,101940,105056,105058,105521,105527,101939,105059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[92784,109008,102615,90021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving reduced nicotinamide adenine dinucleotide (NADH), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.","definition_xrefs":["GOC:jl","ISBN:0618254153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01539":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04152":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"NADH metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NADH metabolism","type":"exact"},{"name":"NAD (reduced) metabolic process","type":"exact"},{"name":"NAD (reduced) metabolism","type":"exact"},{"name":"reduced NAD metabolic process","type":"exact"},{"name":"reduced NAD metabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:0006734","terms_by_termid":{"GO:0006116":null,"GO:0006734":null,"GO:0061621":null}}


id: PBO:0057788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3115","termid":"PBO:0057788"}


id: PBO:0040409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G3","termid":"PBO:0040409"}


id: GO:1901075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["GOC:TermGenie","PMID:19402756","GO:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phagocytosis, engulfment","termid":"GO:0060101"},{"relation_name":"is_a","term_name":"regulation of engulfment of apoptotic cell","termid":"GO:1901074"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic cell clearance","termid":"GO:2000426"},{"relation_name":"negatively_regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of engulfment of apoptotic cell","synonyms":[{"name":"down regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down regulation of engulfment of cell corpse","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down-regulation of engulfment of cell corpse","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"downregulation of engulfment of cell corpse","type":"exact"},{"name":"inhibition of engulfment of apoptotic cell","type":"narrow"},{"name":"inhibition of engulfment of apoptotic cell corpse","type":"narrow"},{"name":"inhibition of engulfment of cell corpse","type":"narrow"},{"name":"negative regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"negative regulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901075"}


id: GO:1900363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["GOC:TermGenie","GOC:se","PMID:15121841"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA polyadenylation (obsolete GO:1900363)","synonyms":[{"name":"regulation of cleavage and polyadenylylation specificity factor activity","type":"narrow"},{"name":"regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900363"}


id: PBO:0070181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 96 pseudogene","termid":"PBO:0070181"}


id: SO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in 5 prime overhangs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_sticky_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"five prime sticky end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001975"}


id: SO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that leads to a change in the location of a termination codon in a transcript but allows the transcript to escape nonsense-mediated decay (NMD). The change in location of a termination codon can be caused by several different types of sequence variants, including stop_gained (SO:0001587), frameshift_variant (SO:0001589), splice_donor_variant (SO:0001575), and splice_acceptor_variant (SO:0001574) types of variants.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD_escaping_variant","synonyms":[{"name":"NMD escaping variant","type":"exact"},{"name":"nonsense-mediated decay escaping variant","type":"exact"}],"termid":"SO:0002320"}


id: FYECO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which melissic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ melissic acid","termid":"FYECO:0000053"}


id: PR:Q9P6R5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12886:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.05","secondary_identifiers":["UniProtKB:Q9P6R5"],"synonyms":[{"name":"GPI mannosyltransferase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC13E7.05","type":"related"},{"name":"Spom972h-PIGM","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6R5"}


id: PBO:0085848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; protein abundance increases in response to DNA replication stress","termid":"PBO:0085848"}


id: GO:0042361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of menaquinones, any of the quinone-derived compounds synthesized by intestinal bacteria. Structurally, menaquinones consist of a methylated naphthoquinone ring structure and side chains composed of a variable number of unsaturated isoprenoid residues. Menaquinones have vitamin K activity and are known as vitamin K2.","definition_xrefs":["PMID:37938463","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menaquinone metabolic process","termid":"GO:0009233"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"menaquinone catabolic process","synonyms":[{"name":"menaquinone breakdown","type":"exact"},{"name":"menaquinone catabolism","type":"exact"},{"name":"menaquinone degradation","type":"exact"},{"name":"menatetrenone catabolic process","type":"exact"},{"name":"menatetrenone catabolism","type":"exact"},{"name":"multiprenylmenaquinone catabolic process","type":"exact"},{"name":"multiprenylmenaquinone catabolism","type":"exact"},{"name":"vitamin K2 catabolic process","type":"exact"},{"name":"vitamin K2 catabolism","type":"exact"}],"termid":"GO:0042361"}


id: PBO:0047650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 6","termid":"PBO:0047650"}


id: GO:0098833
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region of the plasma membrane and underlying cytoplasm which surround the the active zone, into which synaptic vesicle membranes are recycled following exocytosis. It is especially enriched in endocytic proteins following intense activity.","definition_xrefs":["PMID:17455288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic endocytic zone","termid":"GO:0098833"}


id: PBO:0003607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF171 family protein","termid":"PBO:0003607"}


id: PBO:0077991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing","termid":"PBO:0077991"}


id: GO:0102368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-amyrin + NADPH + H+ + O2 = 30-hydroxy-beta-amyrin + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"beta-amyrin 30-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-13489"],"termid":"GO:0102368"}


id: GO:1903683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell-cell adhesion involved in epithelium migration.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:18394891","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:1903681"},{"relation_name":"positively_regulates","term_name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of epithelial cell-cell adhesion involved in epithelium migration","synonyms":[{"name":"activation of epithelial cell-cell adhesion involved in epithelium migration","type":"narrow"},{"name":"up regulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"up-regulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"upregulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"}],"termid":"GO:1903683"}


id: GO:1902036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hematopoietic stem cell differentiation.","definition_xrefs":["PMID:23403623","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"is_a","term_name":"regulation of stem cell differentiation","termid":"GO:2000736"},{"relation_name":"regulates","term_name":"hematopoietic stem cell differentiation","termid":"GO:0060218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hematopoietic stem cell differentiation","synonyms":[{"name":"regulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"regulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"regulation of hemopoietic stem cell differentiation","type":"exact"}],"termid":"GO:1902036"}


id: PATO:0001626
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of whether the bearer has enough functionality.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sufficiency","synonyms":[{"name":"adequacy","type":"related"}],"termid":"PATO:0001626"}


id: FYPO:0008236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An RNA localization phenotype where the loading of siRNAs onto the RITs complex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA localization to chromatin","termid":"FYPO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal siRNA loading onto RITS complex","termid":"FYPO:0008236"}


id: GO:1904557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-alanine across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["GOC:TermGenie","GOC:kmv","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine transport","termid":"GO:0015808"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-alanine transmembrane transport","termid":"GO:1904557"}


id: GO:0007266
data:
  {"annotated_genes":["SJAG_03361","SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95615],"is_not":false,"summary":null,"term":"GO:0007266"},{"annotations":[101460],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0035024"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rho subfamily relays a signal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03361":null,"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Rho protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Rho mediated signal transduction","type":"exact"}],"termid":"GO:0007266","terms_by_termid":{"GO:0007266":null,"GO:0035024":null}}


id: GO:0017187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase.","definition_xrefs":["RESID:AA0032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"protein carboxylation","termid":"GO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glutamic acid carboxylation","termid":"GO:0017187"}


id: GO:0070595
data:
  {"annotated_genes":["SJAG_02278","SJAG_00424","SJAG_02916","SJAG_04236","SJAG_04184","SJAG_01028","SJAG_00610","SJAG_04666","SJAG_03057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100287,110538,113972,105207,85179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[90981,85471,98951,88449],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,3-alpha-glucan metabolic process","type":"exact"},{"name":"1,3-alpha-glucan metabolism","type":"exact"},{"name":"alpha-1,3 glucan metabolic process","type":"exact"},{"name":"alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070595","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: FYPO:0007501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly, arrangement of constituent parts, or disassembly of the horsetail-astral microtubule array is abnormal.","definition_xrefs":["GO:0032118","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during meiotic cell cycle","termid":"FYPO:0007113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abnormal horsetail-astral microtubule organization","synonyms":[{"name":"abnormal horsetail-astral microtubule array organization","type":"exact"},{"name":"abnormal horsetail-astral microtubule organisation","type":"exact"},{"name":"abnormal horsetail-astral microtubule organization and biogenesis","type":"related"}],"termid":"FYPO:0007501"}


id: PBO:0111527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 7","termid":"PBO:0111527"}


id: PBO:0082448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-14 sterol reductase; acts in ergosterol biosynthesis; mutants accumulate the abnormal sterol ignosterol (ergosta-8,14 dienol), and are viable under anaerobic growth conditions but inviable on rich medium under aerobic conditions","termid":"PBO:0082448"}


id: FYPO:0001986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 5-fluorouracil than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to 5-fluorouracil","synonyms":[{"name":"resistance to 5-FU","type":"exact"},{"name":"resistance to 5-fluorouracil during mitotic cell cycle","type":"related"},{"name":"resistance to 5-fluorouracil during vegetative growth","type":"exact"},{"name":"resistant to 5-fluorouracil","type":"exact"}],"termid":"FYPO:0001986"}


id: PBO:0042377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD207 molecule","termid":"PBO:0042377"}


id: GO:0043919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + S-adenosyl 3-(methylsulfanyl)propylamine = H+ + N1-(3-aminopropyl)agmatine + S-methyl-5'-thioadenosine.","definition_xrefs":["PMID:15983049","RHEA:36487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"agmatine aminopropyltransferase activity","secondary_identifiers":["EC:2.5.1.104"],"synonyms":[{"name":"agmatine aminopropyl transferase activity","type":"exact"}],"termid":"GO:0043919"}


id: PBO:0043360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsyntenin 2","termid":"PBO:0043360"}


id: GO:0005108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane ephrin (obsolete GO:0005108)","synonyms":[{"name":"transmembrane ephrin","type":"exact"}],"termid":"GO:0005108"}


id: PBO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 27","termid":"PBO:0062043"}


id: PBO:0030705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_4-nitroquinoline_N-oxide","termid":"PBO:0030705"}


id: PBO:0074587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3C","termid":"PBO:0074587"}


id: PBO:0074916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 87","termid":"PBO:0074916"}


id: PBO:0043520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 1","termid":"PBO:0043520"}


id: SO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains a mutation involving the deletion or insertion of one or more bases, where this number is divisible by 3.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe","termid":"SO:0001817"}


id: PBO:0075825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 1 pseudogene 1","termid":"PBO:0075825"}


id: FYPO:0000044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription by glucose (glucose repression) is abnormal. For example, specific genes that are normally not transcribed in the presence of glucose may be transcribed in the mutant.","definition_xrefs":["GO:0045014","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"},{"relation_name":"is_a","term_name":"abnormal cellular response to nutrient","termid":"FYPO:0001484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0006551"],"is_obsolete":false,"name":"abnormal negative regulation of transcription by glucose","secondary_identifiers":["FYPO:0000210"],"synonyms":[{"name":"abnormal glucose repression","type":"exact"},{"name":"abnormal glucose repression during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of transcription by glucose during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of transcription by glucose during vegetative growth","type":"exact"},{"name":"glucose repression defects","type":"exact"},{"name":"glucose-insensitive transcription","type":"related"}],"termid":"FYPO:0000044"}


id: PBO:0056509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallo-beta-lactamase domain containing 1","termid":"PBO:0056509"}


id: PBO:0078394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 4-1","termid":"PBO:0078394"}


id: GO:1904309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cordycepin stimulus.","definition_xrefs":["GO_REF:0000071","PMID:21597460","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cordycepin","synonyms":[{"name":"response to 3'-deoxyadenosine","type":"exact"}],"termid":"GO:1904309"}


id: GO:0106013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to the cell cortex of the cell tip.","definition_xrefs":["GOC:vw","PMID:19474792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex of cell tip","termid":"GO:1990895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell cortex of cell tip","termid":"GO:0106013"}


id: GO:0033100
data:
  {"annotated_genes":["SJAG_01009","SJAG_00545","SJAG_02629","SJAG_00411","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89992,101424,102624,104048],"is_not":false,"summary":null,"term":"GO:0033100"},{"annotations":[86784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"}]},"cv_name":"cellular_component","definition":"A Gcn5-independent multisubunit complex that catalyzes the acetylation of histone H3. The budding yeast complex includes Sas3p, Taf30p, and Yng1p.","definition_xrefs":["PMID:10817755","PMID:17157260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00411":null,"SJAG_00545":null,"SJAG_01009":null,"SJAG_02165":null,"SJAG_02629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"NuA3 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033100","terms_by_termid":{"GO:0033100":null,"GO:1990467":null}}


id: PR:O43083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hip4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone promoter control protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.08c","synonyms":[{"name":"Spom972h-hip4","type":"exact"}],"termid":"PR:O43083"}


id: PBO:0003340
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silencng In the Middle of the centromere","termid":"PBO:0003340"}


id: PBO:0016532
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YHR072W","termid":"PBO:0016532"}


id: GO:0008824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanate + H2O = carbamate.","definition_xrefs":["EC:4.2.1.104","RHEA:11120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"cyanate hydratase activity","secondary_identifiers":["MetaCyc:R524-RXN","UM-BBD_reactionID:r0608"],"synonyms":[{"name":"carbamate hydro-lyase activity","type":"related"},{"name":"cyanase activity","type":"exact"},{"name":"cyanate C-N-lyase activity","type":"related"},{"name":"cyanate aminohydrolase activity","type":"related"},{"name":"cyanate hydrolase activity","type":"related"},{"name":"cyanate lyase activity","type":"exact"}],"termid":"GO:0008824"}


id: MOD:01186
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to either N-acetyl-L-threonne, or O-acetyl-Lthreonine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"acetylated L-threonine","synonyms":[{"name":"AcThr","type":"exact"}],"termid":"MOD:01186"}


id: GO:0031571
data:
  {"annotated_genes":["SJAG_00169","SJAG_02026"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87330,105806],"is_not":false,"summary":null,"term":"GO:0031571"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a mitotic cell cycle G1/S transition DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic DNA damage checkpoint signaling","termid":"GO:0044773"},{"relation_name":"is_a","term_name":"mitotic G1/S transition checkpoint signaling","termid":"GO:0044819"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_02026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044772","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mitotic G1 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044783","GO:0072431","GO:1902400"],"synonyms":[{"name":"G1 DNA damage checkpoint","type":"related"},{"name":"G1/S DNA damage checkpoint","type":"related"},{"name":"intracellular signal transduction involved in G1 DNA damage checkpoint","type":"exact"},{"name":"intracellular signal transduction involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in G1 DNA damage checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in G1 DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling chain involved in G1 DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling chain involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in G1 DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"mitotic G1 DNA damage checkpoint","type":"exact"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic G1 DNA damage checkpoint","type":"related"},{"name":"signal transduction involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in G1 DNA damage checkpoint","type":"exact"},{"name":"signal transduction via intracellular signaling cascade involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"signal transmission via intracellular cascade involved in G1 DNA damage checkpoint","type":"exact"}],"termid":"GO:0031571","terms_by_termid":{"GO:0031571":null}}


id: PR:Q01475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein SAR1b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small COPII coat GTPase sar1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.06c","secondary_identifiers":["UniProtKB:Q01475"],"synonyms":[{"name":"SPBC31F10.06c","type":"related"},{"name":"Spom972h-SAR1B","type":"exact"}],"termid":"PR:Q01475"}


id: FYPO:0002879
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription does not occur when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription","termid":"FYPO:0002877"},{"relation_name":"is_a","term_name":"decreased transcription during glucose starvation","termid":"FYPO:0003120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"abolished transcription during glucose starvation","synonyms":[{"name":"abolished transcription during glucose deprivation","type":"exact"},{"name":"abolished glucose deprivation induced gene expression","type":"related"},{"name":"abolished transcription during cellular response to glucose starvation","type":"exact"},{"name":"abolished transcription during glucose depletion","type":"exact"},{"name":"abolished transcription during glucose limitation","type":"related"},{"name":"abolished transcription during glucose starvation during mitotic cell cycle","type":"related"},{"name":"abolished transcription during glucose starvation during vegetative growth","type":"exact"},{"name":"abolished transcription in response to glucose starvation","type":"exact"},{"name":"transcription abolished during glucose starvation","type":"exact"}],"termid":"FYPO:0002879"}


id: PBO:0068966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 210, pseudogene","termid":"PBO:0068966"}


id: PBO:0045043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 3","termid":"PBO:0045043"}


id: PBO:0052885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-8","termid":"PBO:0052885"}


id: PBO:0084230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydrophilic protein involved in ER/Golgi vesicle trafficking; SM (Sec1/Munc-18) family protein that binds the tSNARE Sed5p and stimulates its assembly into a trans-SNARE membrane-protein complex","termid":"PBO:0084230"}


id: GO:0106291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + 2 O2 = H+ + NAD+ + 2 superoxide.","definition_xrefs":["RHEA:63184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superoxide-generating NAD(P)H oxidase activity","termid":"GO:0016175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"superoxide-generating NADH oxidase activity","termid":"GO:0106291"}


id: PATO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001082 damage value (obsolete PATO:0001082)","termid":"PATO:0001082"}


id: GO:1904560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diphenidol stimulus.","definition_xrefs":["GO_REF:0000071","GOC:mr","GOC:TermGenie","PMID:25796330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diphenidol","termid":"GO:1904560"}


id: GO:0031014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to troponin T, the tropomyosin-binding subunit of the troponin complex.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"troponin T binding","termid":"GO:0031014"}


id: PBO:0048903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A7","termid":"PBO:0048903"}


id: PBO:0028815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_primary_amine_oxidase_activity","termid":"PBO:0028815"}


id: PBO:0044767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 50 pseudogene 1","termid":"PBO:0044767"}


id: PR:O94401
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicular integral-membrane protein VIP36 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04953","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type lectin-like domain-containing protein C126.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.08c","secondary_identifiers":["UniProtKB:O94401"],"synonyms":[{"name":"Spom972h-LMAN2","type":"exact"}],"termid":"PR:O94401"}


id: GO:0150004
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the dendritic spine neck where the spine arises from the dendritic shaft.","definition_xrefs":["GOC:aruk","PMID:9030614","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendritic spine neck","termid":"GO:0044326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine origin","termid":"GO:0150004"}


id: PBO:0082420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional triacylglycerol lipase and 1-acyl DHAP reductase; NADPH-dependent 1-acyl dihydroxyacetone phosphate reductase involved in phosphatidic acid biosynthesis; lipid droplet triacylglycerol lipase involved in mobilization of non-polar lipids; found in lipid particles, endoplasmic reticulum and mitochondrial outer membrane; forms NADPH-regulated channel in mitochondrial outer membrane; required for spore germination; role in cell wall biosynthesis; capable of metabolizing steroid hormones","termid":"PBO:0082420"}


id: GO:0120237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a terminal acetylenic compound, a compound which contains a terminal alkyne moiety in which a carbon of the carbon-carbon triple bond (aka C#C) moiety is attached to a hydrogen atom.","definition_xrefs":["GOC:krc","DOI:10.1007/978-1-4615-4913-0_3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal acetylenic compound metabolic process","termid":"GO:0120244"},{"relation_name":"is_a","term_name":"acetylenic compound biosynthetic process","termid":"GO:0120247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal acetylenic compound biosynthetic process","synonyms":[{"name":"terminal alkyne substituted compound anabolic process","type":"exact"},{"name":"terminal alkyne substituted compound anabolism","type":"exact"},{"name":"terminal alkyne substituted compound biosynthesis","type":"exact"},{"name":"terminal alkyne substituted compound biosynthetic process","type":"exact"},{"name":"terminal alkyne substituted compound synthesis","type":"exact"}],"termid":"GO:0120237"}


id: GO:0034477
data:
  {"annotated_genes":["SJAG_01798"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89767],"is_not":false,"summary":null,"term":"GO:0034477"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a U6 snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA 3'-end processing","termid":"GO:0034472"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01798":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016073","GO:0010467"],"is_obsolete":false,"name":"U6 snRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"U6 snRNA 3' end processing","type":"exact"}],"termid":"GO:0034477","terms_by_termid":{"GO:0034477":null}}


id: PBO:0079663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 11","termid":"PBO:0079663"}


id: PBO:0064089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol transfer protein membrane associated 1","termid":"PBO:0064089"}


id: PBO:0062577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 1 pseudogene","termid":"PBO:0062577"}


id: PBO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIII (predicted)","termid":"PBO:0001853"}


id: GO:0061223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal cell differentiation involved in kidney development","termid":"GO:0072161"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchymal cell differentiation","termid":"GO:0061223"}


id: PBO:0084140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity glucose transporter; member of the major facilitator superfamily, expression is induced by low levels of glucose and repressed by high levels of glucose; HXT4 has a paralog, HXT7, that arose from the whole genome duplication","termid":"PBO:0084140"}


id: GO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid-encoded DNA-directed RNA polymerase complex that resembles eubacterial multisubunit RNA polymerases, with a core composed of alpha, beta, and beta-prime subunits. An additional subunit, a sigma factor, is required for promoter recognition. PEP-A is generated from the PEP-B form during chloroplast maturation to generate a complex composed of at least thirteen polypeptides that is not sensitive to the antibiotic rifampicin, like its precursor form the PEP-B complex.","definition_xrefs":["PMID:10946105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid-encoded plastid RNA polymerase complex","termid":"GO:0000427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid-encoded plastid RNA polymerase complex A","synonyms":[{"name":"PEP-A","type":"exact"}],"termid":"GO:0000343"}


id: PBO:0059240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L11 pseudogene 3","termid":"PBO:0059240"}


id: FYPO:0001682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity increases normally (i.e. as in wild type) as a result of a salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity increase during cellular response to salt stress","synonyms":[{"name":"normal increase in trehalase activity in response to salt stress","type":"exact"},{"name":"normal neutral trehalase activity increase during cellular response to salt stress","type":"exact"},{"name":"normal trehalase activity increase during cellular response to salt stress","type":"broad"}],"termid":"FYPO:0001682"}


id: GO:0009889
data:
  {"annotated_genes":["SJAG_04607","SJAG_05153","SJAG_04820","SJAG_00987","SJAG_00425","SJAG_03070","SJAG_05240","SJAG_03886","SJAG_02394","SJAG_03006","SJAG_02052","SJAG_03223","SJAG_03689","SJAG_01728","SJAG_00343","SJAG_02043","SJAG_01764","SJAG_02773","SJAG_00693","SJAG_00735","SJAG_05337","SJAG_00676","SJAG_07011","SJAG_05242","SJAG_02589","SJAG_00969","SJAG_04006","SJAG_04056","SJAG_04312","SJAG_01053","SJAG_05006","SJAG_04360","SJAG_05020","SJAG_00792","SJAG_00861","SJAG_01694","SJAG_00963","SJAG_04576","SJAG_00386","SJAG_02285","SJAG_04407","SJAG_01822","SJAG_02922","SJAG_00053","SJAG_02846","SJAG_03501","SJAG_02058","SJAG_04194","SJAG_02720","SJAG_06641","SJAG_04422","SJAG_03745","SJAG_01254","SJAG_01000","SJAG_02278","SJAG_00184","SJAG_00584","SJAG_01157","SJAG_00743","SJAG_01906","SJAG_00456","SJAG_01804","SJAG_03286","SJAG_03792","SJAG_03550","SJAG_04130","SJAG_04544","SJAG_00596","SJAG_03130","SJAG_00045","SJAG_01942","SJAG_04614","SJAG_04825","SJAG_04030","SJAG_03033","SJAG_03283","SJAG_01938","SJAG_00690","SJAG_01436","SJAG_04668","SJAG_01553","SJAG_02252","SJAG_04890","SJAG_02218","SJAG_05014","SJAG_00934","SJAG_03635","SJAG_00320","SJAG_03845","SJAG_00966","SJAG_00266","SJAG_02342","SJAG_04611","SJAG_00579","SJAG_02691","SJAG_02629","SJAG_01916","SJAG_01653","SJAG_03366","SJAG_02817","SJAG_00341","SJAG_02879","SJAG_03945","SJAG_04793","SJAG_01204","SJAG_01610","SJAG_01611","SJAG_03036","SJAG_06638","SJAG_02191","SJAG_00507","SJAG_00883","SJAG_01910","SJAG_03388","SJAG_03599","SJAG_03193","SJAG_03143","SJAG_03448","SJAG_03319","SJAG_00142","SJAG_03981","SJAG_03879","SJAG_01150","SJAG_01047","SJAG_02541","SJAG_04574","SJAG_00822","SJAG_02275","SJAG_01919","SJAG_04613","SJAG_02621","SJAG_00759","SJAG_02072","SJAG_01111","SJAG_02990","SJAG_03454","SJAG_02752","SJAG_00441","SJAG_02026","SJAG_04026","SJAG_01771","SJAG_03942","SJAG_04452","SJAG_03952","SJAG_00786","SJAG_00961","SJAG_03839","SJAG_00686","SJAG_03061","SJAG_05010","SJAG_02048","SJAG_02154","SJAG_02380","SJAG_01513","SJAG_04213","SJAG_04666","SJAG_04084","SJAG_02382","SJAG_02406","SJAG_05343","SJAG_03668","SJAG_05694","SJAG_04061","SJAG_02730","SJAG_04500","SJAG_01465","SJAG_04586","SJAG_03421","SJAG_02494","SJAG_03431","SJAG_04435","SJAG_02255","SJAG_01601","SJAG_01151","SJAG_04756","SJAG_00873","SJAG_01529","SJAG_02872","SJAG_00163","SJAG_01062","SJAG_05247","SJAG_01402","SJAG_03067","SJAG_04818","SJAG_01873","SJAG_01075","SJAG_02869","SJAG_00160","SJAG_00150","SJAG_00739","SJAG_03597","SJAG_03519","SJAG_04647","SJAG_02613","SJAG_03628","SJAG_03548","SJAG_04159","SJAG_03758","SJAG_02189","SJAG_03916","SJAG_02698","SJAG_03735","SJAG_02569","SJAG_01818","SJAG_02709","SJAG_06608","SJAG_03356","SJAG_02119","SJAG_03179","SJAG_04705","SJAG_02573","SJAG_01787","SJAG_03255","SJAG_03128","SJAG_01199","SJAG_01149","SJAG_00904","SJAG_02303","SJAG_01431","SJAG_02778","SJAG_03041","SJAG_04355","SJAG_04813","SJAG_02391","SJAG_02066","SJAG_00470","SJAG_04880","SJAG_05276","SJAG_04396","SJAG_04596","SJAG_02239","SJAG_02576","SJAG_04321","SJAG_02374","SJAG_06599","SJAG_01583","SJAG_04758","SJAG_04141","SJAG_01799","SJAG_03118","SJAG_03618","SJAG_05243","SJAG_01046","SJAG_01707","SJAG_04942","SJAG_04959","SJAG_04421","SJAG_01805","SJAG_00973","SJAG_01532","SJAG_00424","SJAG_00058","SJAG_01843","SJAG_00156","SJAG_02005","SJAG_00423","SJAG_02381","SJAG_00124","SJAG_01403","SJAG_01040","SJAG_02810","SJAG_03132","SJAG_04749","SJAG_01675","SJAG_02549","SJAG_02104","SJAG_04249","SJAG_00756","SJAG_02927","SJAG_02723","SJAG_03680","SJAG_00285","SJAG_03805","SJAG_03048","SJAG_00670","SJAG_03106","SJAG_04427","SJAG_01441","SJAG_04099","SJAG_04873","SJAG_04383","SJAG_00335","SJAG_00342","SJAG_02467","SJAG_01230","SJAG_04755","SJAG_02608","SJAG_04771","SJAG_01205","SJAG_02326","SJAG_04085","SJAG_01113","SJAG_03484","SJAG_03869","SJAG_03170","SJAG_04097","SJAG_00087","SJAG_01110","SJAG_03346","SJAG_00769","SJAG_00293","SJAG_03787","SJAG_01944","SJAG_01622","SJAG_02906","SJAG_00297","SJAG_04921","SJAG_01079","SJAG_02203","SJAG_00797","SJAG_03383","SJAG_01252","SJAG_01952","SJAG_01521","SJAG_02849","SJAG_03394","SJAG_03157","SJAG_01867","SJAG_01936","SJAG_03276","SJAG_03884","SJAG_03576","SJAG_03931","SJAG_01540","SJAG_04509","SJAG_02194","SJAG_02981","SJAG_02385","SJAG_00701","SJAG_02311","SJAG_03590","SJAG_02622","SJAG_04350","SJAG_03538","SJAG_00854","SJAG_00302","SJAG_00269","SJAG_04824","SJAG_05000","SJAG_00613","SJAG_01599","SJAG_03696","SJAG_03047","SJAG_00251","SJAG_00067","SJAG_01711","SJAG_04989","SJAG_02254","SJAG_01376","SJAG_00226","SJAG_05288","SJAG_02938","SJAG_03911","SJAG_00169","SJAG_01830","SJAG_04389","SJAG_02149","SJAG_03876","SJAG_04601","SJAG_00698","SJAG_00713","SJAG_00979","SJAG_01930","SJAG_01625","SJAG_01243","SJAG_02415","SJAG_02812","SJAG_02409","SJAG_02592","SJAG_00073","SJAG_01745","SJAG_05187","SJAG_04191","SJAG_00642","SJAG_01331","SJAG_00758","SJAG_04005","SJAG_04186","SJAG_00892","SJAG_01191","SJAG_00896","SJAG_04682","SJAG_04381","SJAG_02571","SJAG_02540","SJAG_02036","SJAG_02808","SJAG_01286","SJAG_03940","SJAG_02785","SJAG_04153","SJAG_00746","SJAG_04283","SJAG_04025","SJAG_04198","SJAG_03230","SJAG_03573","SJAG_04009","SJAG_01658","SJAG_04274","SJAG_03883","SJAG_02370","SJAG_03984","SJAG_04064","SJAG_02756","SJAG_04539","SJAG_03289","SJAG_02798","SJAG_04018","SJAG_04551","SJAG_03944","SJAG_00452","SJAG_02873","SJAG_03918","SJAG_03677","SJAG_04584","SJAG_05203","SJAG_03234","SJAG_04253","SJAG_03844","SJAG_01213","SJAG_03113","SJAG_01249","SJAG_01187","SJAG_04038","SJAG_03982","SJAG_00304","SJAG_16457","SJAG_02638","SJAG_04839","SJAG_04388","SJAG_04206","SJAG_04640","SJAG_00290","SJAG_04512","SJAG_02768","SJAG_04527","SJAG_02466","SJAG_04369","SJAG_01778","SJAG_02671","SJAG_03023","SJAG_04205","SJAG_02389","SJAG_04268","SJAG_03466","SJAG_02551","SJAG_01836","SJAG_04462","SJAG_00926","SJAG_04374","SJAG_05313","SJAG_05265","SJAG_02383","SJAG_04092","SJAG_03145","SJAG_03694","SJAG_01016","SJAG_02725","SJAG_01325","SJAG_01218","SJAG_03752","SJAG_03776","SJAG_04855","SJAG_01343","SJAG_05161","SJAG_04619","SJAG_01740","SJAG_03624","SJAG_00610","SJAG_02447","SJAG_02213","SJAG_01511","SJAG_02458","SJAG_01878","SJAG_03183","SJAG_04036","SJAG_00391","SJAG_00573","SJAG_03473","SJAG_03664","SJAG_00349","SJAG_00037","SJAG_00868","SJAG_03706","SJAG_03705","SJAG_02170","SJAG_01412","SJAG_04373","SJAG_16454","SJAG_02416","SJAG_01008","SJAG_00210","SJAG_01672","SJAG_02439","SJAG_00545","SJAG_03997","SJAG_02701","SJAG_03042","SJAG_01307","SJAG_00909","SJAG_03441","SJAG_02474","SJAG_02018","SJAG_04782","SJAG_03543","SJAG_01475","SJAG_05234","SJAG_02908","SJAG_02329","SJAG_02401","SJAG_01680","SJAG_00164","SJAG_05341","SJAG_03126","SJAG_00600","SJAG_04712","SJAG_02858","SJAG_03081","SJAG_02138","SJAG_02500","SJAG_03622","SJAG_02956","SJAG_00581","SJAG_04946","SJAG_05192","SJAG_04039","SJAG_02601","SJAG_03241","SJAG_04546","SJAG_02044","SJAG_02898","SJAG_02444","SJAG_03579","SJAG_02594","SJAG_06576","SJAG_02165","SJAG_00766","SJAG_00249","SJAG_01926","SJAG_00440","SJAG_01823","SJAG_02057","SJAG_02314","SJAG_04768","SJAG_01517","SJAG_01725","SJAG_04118","SJAG_02196","SJAG_00664","SJAG_02319","SJAG_04291","SJAG_01311","SJAG_05322","SJAG_00641","SJAG_00414","SJAG_00802","SJAG_01058","SJAG_01579","SJAG_00996","SJAG_03967","SJAG_03867","SJAG_02472","SJAG_03627","SJAG_00410","SJAG_04879"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114485],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0061158"},{"annotations":[96174,114486,86221,77531],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[102366,70946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"},{"annotations":[95641,112148,106621,95199,114262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033562"},{"annotations":[107410,109760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140719"},{"annotations":[109632,106068,106018,108150,87573,102250],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000290"},{"annotations":[88572,101696],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031087"},{"annotations":[89423,87260,108254,93286,115017,100302,105597,112381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0040029"},{"annotations":[99328,90119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140718"},{"annotations":[98096,99162,108761,113300,98098,99329,92216,90120,95202,95228,108762,108760,111416,113933,84192,98097,109213,86786,94981],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033696"},{"annotations":[86787,108357,108764,90650,98099,87811,88625,98503,100304,106081,108763,98101,100206,108765,111165,87293,98100,110276,113887,90391,105598,115605,100303,111570,115606,110146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031507"},{"annotations":[88264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071044"},{"annotations":[111010,114094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006402"},{"annotations":[114283],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[85516,92310],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[100492,86439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[104097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[91644,114400,111011,95523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[87331,105807,108303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[88537,88840,95414,90408,111777,105808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[97156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045892"},{"annotations":[89921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[107908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[107404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[90101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"},{"annotations":[84844,96993,112150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010629"},{"annotations":[89267,89229,110303,99223,93287,93400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045814"},{"annotations":[86958,77630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[111642,107515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[85115,85517],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[85818],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[105864,108894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[102765],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:0061188"},{"annotations":[104620],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[84877,102620,88181,89922,91154,98881,102021,104362,108240,104099,110733,102844,111796,102863,89780,83630,110420,87206,107284,97935,109989,88157,90685,92344,86082,106863,109130,112241,113545,91155,79165,89427,100071,103124,104702,99666,97080,89818,90102,101141,87278,97058,90765,100305,98190,101929,102368,102609,89327,100374,98189,94962,104587,105147,90271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[92451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[97081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[114112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[95525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"},{"annotations":[91967,89100,85478,92595,98168,101373,91001,100515,102578,112050,114472,111606,97121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071028"},{"annotations":[89478,103582,93313,109418,114285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[112502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[111711,105387,88388,102422,84873,86821,114286,83533,91045,105920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"},{"annotations":[91968,103583,98169,100516,112051,114473,93314,102579,111607,101374,89101,88268],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0071042"},{"annotations":[106020,98619,91678,91002,104668,112581,87718,98263,101022,111490,107394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000956"},{"annotations":[85830,98171,112053,113403,93317,100518,91970,112319,97322,102581,104954,114475,103586,89103,84789,87544,101376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070478"},{"annotations":[71427,76334,94214,85730,70267,107211,109480,70706,96006,74061,94127,111305],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0000288"},{"annotations":[92794,87885,95172,83534,88272,105368,86896,114289,100417,103587,107443,105388,86822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033621"},{"annotations":[110264,103301,112198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070966"},{"annotations":[104955,91971,93318,101377,100519,98172,113404,97323,103588,114476,89104,102582,112320,112054,112199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070481"},{"annotations":[87545,85831,86342,102005,85935,95856,109736,111539,100871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000184"},{"annotations":[92559,100887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000294"},{"annotations":[86812,85819,91559,87956,88617,113342,89442,94587,88015,88522,99137,90376,105334,111821,112779],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[94334,95208,87294,86083,89479,98105,88854,88095,108770,104291,92795,108255,90122,108358,106623,108771,109450,100207,98882,86242,98107,107413,108769,110149,110577,99331,98106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031508"},{"annotations":[87369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140462"},{"annotations":[87691],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[91679],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[88439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060635"},{"annotations":[113707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"},{"annotations":[102767,113305,84603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[108069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045893"},{"annotations":[105003,107054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[105984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[85551,86223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010628"},{"annotations":[95041],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[97997,94781,108819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[96539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[114584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[72883,74255,107064,88182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[102769],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:0120272"},{"annotations":[85731,97090,101024],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:0060213"},{"annotations":[87207],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[84491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903931"},{"annotations":[83556,88443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[89528,83995,85495,102771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[111349,85741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[92276,88068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000234"},{"annotations":[87208,90414,106480],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:0090055"},{"annotations":[108110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[85070,109838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"},{"annotations":[103090,113171,88069,106706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"},{"annotations":[67782,62545,87433,98370,104764,89328,98962,93594,105316,96567,90651,94653,107007,108444,91859,109839,110242,110277,110991,62490,104100,100892,98798,104705,113661,89848,105825,95373,92345,93366,107023,115272,88626,110735,65507,91125,93591,98242,88776,108030,113164,113172,103706,92995,105179,104588,111166,112643,105004,114404,60744,113547,83631,64644,95582,61596,89754,90415,104935,103177,93592,103542,112242,84063,68550,105449,109791,91582,90379,99272,115273,86124,108070,107899,85071,84194,93590,102224,112449,105484,84253,90781,106864,96579,98324,67692,75242,114237,93593,91747,100566,101954,83454,94499,107055,100558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045944"},{"annotations":[113173,102156,91860,99164,105167,111458,101484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[90490,105168,91916,110887,111459,102485,83492,102157,99522,86397,86710,104851,98044,94754,91430,90380,102351,101809,115109,99790,95104,104878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"},{"annotations":[67565,65803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[97091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[67566,65804,90846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"},{"annotations":[85223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"},{"annotations":[115604,115603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016441"},{"annotations":[114265,103910],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990431"},{"annotations":[108256,110578,109451,88096,103361,100208,104292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000183"},{"annotations":[95109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"},{"annotations":[91426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000381"},{"annotations":[83930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[101461,114087,88445,88428,86801,98949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[105985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[101362,96802,113633,92132,92277,98676,96355,86297,105842,95529,107302,108544,112999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000765"},{"annotations":[91513,110131,105619,106290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140018"},{"annotations":[100077,99434,91270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"},{"annotations":[96503,72008,57439,68073,71096,56997,74746,83428,67597,77615,90348,95222,92716,100649,89230,105456,62541,91531,105709,109214,100833,93294,91497,99724,78763,108809,110873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006355"},{"annotations":[84599,84598,101955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"},{"annotations":[85471,90981,98951,88449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"},{"annotations":[59098,67496,72564,98486,108380,64383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010468"},{"annotations":[86841,94643],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:0031445"},{"annotations":[114179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"},{"annotations":[98597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070129"},{"annotations":[112802],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:0061013"},{"annotations":[94644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905744"},{"annotations":[89783,114894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048024"},{"annotations":[84442,113460],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:0043488"},{"annotations":[86224,85832,87546],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:2000815"},{"annotations":[94588],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:0060211"},{"annotations":[96384,93256],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:0090052"},{"annotations":[107315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010967"},{"annotations":[113934],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:0010964"},{"annotations":[93257,87886,96385,113935,114290],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1902801"},{"annotations":[91133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032210"},{"annotations":[104535,72858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006356"},{"annotations":[91943,92639,107039,88489,90251,59616,85372,84526,106865,66486,95042,100072,57683,60101,64645,65797,104592,86725,96206,101886,85827,109563,93443,106611,89545,87627,108071,97572,98134,90176,111299,112458,88523,68653,103810,112783,114525,57387,114737,57850,84064,109123,96580,60786,85247,77150,89271,93125,83693,58899,62293,95888,62330,88665,84825,88318,84195,89683,104051,58421,97776,105317,87936,107200,84436,87434,94184,64228,103454,108232,88778,90195,103569,104353,110462,111417,67457,84953,89330,99472,92097,60574,91888,91938,57111,67616,100559,107900,109131,113662,94578,105181,86788,110304,61376,100153,101426,108391,68130,84492,113791,108699,93888,109288,113936,101507,114113,86617,85142,85072,90052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006357"},{"annotations":[87209,104536,72859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006359"},{"annotations":[99204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990983"},{"annotations":[107862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006449"},{"annotations":[114291,87887,88855],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043628"},{"annotations":[114292,108008,85820,111822,83535,102661,88274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031047"},{"annotations":[114157,105252,114266,108009,110723,95643,109215,103479,100209,109826,103911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031048"},{"annotations":[112712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141005"},{"annotations":[95645,104293,100306,106624,99334,90123,114267,112152,107350,92796,109452,108359,104102,108257,88779,91573,109827,113877,100210,114990,87295,107414,95209,88097,110150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030466"},{"annotations":[114268,103912],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990432"},{"annotations":[95646,105253],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030422"},{"annotations":[100307,106625,108258,114293,83536,86824,112710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902794"},{"annotations":[102423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"},{"annotations":[110151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141194"},{"annotations":[108360,107351,84868,114158,95647,109828,114991,112153,90135,106796,91386,110464,110724,111585,87296,106626,113878,95210,102662,114269,92797,84812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"},{"annotations":[113879,114270,95211,106627,84464,104294,92798,100308,109453,114992,107415,88098,108259,86243,86085,100211,87297,109829,90124,99335,94335,110152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031509"},{"annotations":[86667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"},{"annotations":[110874,103021,109132,90053,90224,95223,99473,105599,99965,86726,103811,111550,94579,83694,84908,111418,90686,110554,90252,111868,113792,88319,110381,91939,90196,109289,111564,113629,107901,83841,86098,84527,99224,103570,109474,86618,108700,110392,101887,109306,106748,89547,92508,88820,98883,101744,91524,105201,94747,91944,85143,94315,104593,86740,105477,90349,97644,113742,84196,93890,95472,105710,97059,110465,93154,87435,112459,89819,113081,112520,113444,84380,84016,100674,113719,90177,101142,112711,92717,85828,114142,91498,104008,106612,111167,101134,102864,103455,85316,90163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045815"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":566,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00045":null,"SJAG_00053":null,"SJAG_00058":null,"SJAG_00067":null,"SJAG_00073":null,"SJAG_00087":null,"SJAG_00124":null,"SJAG_00142":null,"SJAG_00150":null,"SJAG_00156":null,"SJAG_00160":null,"SJAG_00163":null,"SJAG_00164":null,"SJAG_00169":null,"SJAG_00184":null,"SJAG_00210":null,"SJAG_00226":null,"SJAG_00249":null,"SJAG_00251":null,"SJAG_00266":null,"SJAG_00269":null,"SJAG_00285":null,"SJAG_00290":null,"SJAG_00293":null,"SJAG_00297":null,"SJAG_00302":null,"SJAG_00304":null,"SJAG_00320":null,"SJAG_00335":null,"SJAG_00341":null,"SJAG_00342":null,"SJAG_00343":null,"SJAG_00349":null,"SJAG_00386":null,"SJAG_00391":null,"SJAG_00410":null,"SJAG_00414":null,"SJAG_00423":null,"SJAG_00424":null,"SJAG_00425":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00452":null,"SJAG_00456":null,"SJAG_00470":null,"SJAG_00507":null,"SJAG_00545":null,"SJAG_00573":null,"SJAG_00579":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00596":null,"SJAG_00600":null,"SJAG_00610":null,"SJAG_00613":null,"SJAG_00641":null,"SJAG_00642":null,"SJAG_00664":null,"SJAG_00670":null,"SJAG_00676":null,"SJAG_00686":null,"SJAG_00690":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00701":null,"SJAG_00713":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00756":null,"SJAG_00758":null,"SJAG_00759":null,"SJAG_00766":null,"SJAG_00769":null,"SJAG_00786":null,"SJAG_00792":null,"SJAG_00797":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_00854":null,"SJAG_00861":null,"SJAG_00868":null,"SJAG_00873":null,"SJAG_00883":null,"SJAG_00892":null,"SJAG_00896":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00926":null,"SJAG_00934":null,"SJAG_00961":null,"SJAG_00963":null,"SJAG_00966":null,"SJAG_00969":null,"SJAG_00973":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01008":null,"SJAG_01016":null,"SJAG_01040":null,"SJAG_01046":null,"SJAG_01047":null,"SJAG_01053":null,"SJAG_01058":null,"SJAG_01062":null,"SJAG_01075":null,"SJAG_01079":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01113":null,"SJAG_01149":null,"SJAG_01150":null,"SJAG_01151":null,"SJAG_01157":null,"SJAG_01187":null,"SJAG_01191":null,"SJAG_01199":null,"SJAG_01204":null,"SJAG_01205":null,"SJAG_01213":null,"SJAG_01218":null,"SJAG_01230":null,"SJAG_01243":null,"SJAG_01249":null,"SJAG_01252":null,"SJAG_01254":null,"SJAG_01286":null,"SJAG_01307":null,"SJAG_01311":null,"SJAG_01325":null,"SJAG_01331":null,"SJAG_01343":null,"SJAG_01376":null,"SJAG_01402":null,"SJAG_01403":null,"SJAG_01412":null,"SJAG_01431":null,"SJAG_01436":null,"SJAG_01441":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01511":null,"SJAG_01513":null,"SJAG_01517":null,"SJAG_01521":null,"SJAG_01529":null,"SJAG_01532":null,"SJAG_01540":null,"SJAG_01553":null,"SJAG_01579":null,"SJAG_01583":null,"SJAG_01599":null,"SJAG_01601":null,"SJAG_01610":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01625":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01672":null,"SJAG_01675":null,"SJAG_01680":null,"SJAG_01694":null,"SJAG_01707":null,"SJAG_01711":null,"SJAG_01725":null,"SJAG_01728":null,"SJAG_01740":null,"SJAG_01745":null,"SJAG_01764":null,"SJAG_01771":null,"SJAG_01778":null,"SJAG_01787":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_01805":null,"SJAG_01818":null,"SJAG_01822":null,"SJAG_01823":null,"SJAG_01830":null,"SJAG_01836":null,"SJAG_01843":null,"SJAG_01867":null,"SJAG_01873":null,"SJAG_01878":null,"SJAG_01906":null,"SJAG_01910":null,"SJAG_01916":null,"SJAG_01919":null,"SJAG_01926":null,"SJAG_01930":null,"SJAG_01936":null,"SJAG_01938":null,"SJAG_01942":null,"SJAG_01944":null,"SJAG_01952":null,"SJAG_02005":null,"SJAG_02018":null,"SJAG_02026":null,"SJAG_02036":null,"SJAG_02043":null,"SJAG_02044":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02057":null,"SJAG_02058":null,"SJAG_02066":null,"SJAG_02072":null,"SJAG_02104":null,"SJAG_02119":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02154":null,"SJAG_02165":null,"SJAG_02170":null,"SJAG_02189":null,"SJAG_02191":null,"SJAG_02194":null,"SJAG_02196":null,"SJAG_02203":null,"SJAG_02213":null,"SJAG_02218":null,"SJAG_02239":null,"SJAG_02252":null,"SJAG_02254":null,"SJAG_02255":null,"SJAG_02275":null,"SJAG_02278":null,"SJAG_02285":null,"SJAG_02303":null,"SJAG_02311":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02326":null,"SJAG_02329":null,"SJAG_02342":null,"SJAG_02370":null,"SJAG_02374":null,"SJAG_02380":null,"SJAG_02381":null,"SJAG_02382":null,"SJAG_02383":null,"SJAG_02385":null,"SJAG_02389":null,"SJAG_02391":null,"SJAG_02394":null,"SJAG_02401":null,"SJAG_02406":null,"SJAG_02409":null,"SJAG_02415":null,"SJAG_02416":null,"SJAG_02439":null,"SJAG_02444":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02467":null,"SJAG_02472":null,"SJAG_02474":null,"SJAG_02494":null,"SJAG_02500":null,"SJAG_02540":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02551":null,"SJAG_02569":null,"SJAG_02571":null,"SJAG_02573":null,"SJAG_02576":null,"SJAG_02589":null,"SJAG_02592":null,"SJAG_02594":null,"SJAG_02601":null,"SJAG_02608":null,"SJAG_02613":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02629":null,"SJAG_02638":null,"SJAG_02671":null,"SJAG_02691":null,"SJAG_02698":null,"SJAG_02701":null,"SJAG_02709":null,"SJAG_02720":null,"SJAG_02723":null,"SJAG_02725":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02756":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02778":null,"SJAG_02785":null,"SJAG_02798":null,"SJAG_02808":null,"SJAG_02810":null,"SJAG_02812":null,"SJAG_02817":null,"SJAG_02846":null,"SJAG_02849":null,"SJAG_02858":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02873":null,"SJAG_02879":null,"SJAG_02898":null,"SJAG_02906":null,"SJAG_02908":null,"SJAG_02922":null,"SJAG_02927":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_02981":null,"SJAG_02990":null,"SJAG_03006":null,"SJAG_03023":null,"SJAG_03033":null,"SJAG_03036":null,"SJAG_03041":null,"SJAG_03042":null,"SJAG_03047":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03067":null,"SJAG_03070":null,"SJAG_03081":null,"SJAG_03106":null,"SJAG_03113":null,"SJAG_03118":null,"SJAG_03126":null,"SJAG_03128":null,"SJAG_03130":null,"SJAG_03132":null,"SJAG_03143":null,"SJAG_03145":null,"SJAG_03157":null,"SJAG_03170":null,"SJAG_03179":null,"SJAG_03183":null,"SJAG_03193":null,"SJAG_03223":null,"SJAG_03230":null,"SJAG_03234":null,"SJAG_03241":null,"SJAG_03255":null,"SJAG_03276":null,"SJAG_03283":null,"SJAG_03286":null,"SJAG_03289":null,"SJAG_03319":null,"SJAG_03346":null,"SJAG_03356":null,"SJAG_03366":null,"SJAG_03383":null,"SJAG_03388":null,"SJAG_03394":null,"SJAG_03421":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03448":null,"SJAG_03454":null,"SJAG_03466":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03501":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03543":null,"SJAG_03548":null,"SJAG_03550":null,"SJAG_03573":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03590":null,"SJAG_03597":null,"SJAG_03599":null,"SJAG_03618":null,"SJAG_03622":null,"SJAG_03624":null,"SJAG_03627":null,"SJAG_03628":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03668":null,"SJAG_03677":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03694":null,"SJAG_03696":null,"SJAG_03705":null,"SJAG_03706":null,"SJAG_03735":null,"SJAG_03745":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03792":null,"SJAG_03805":null,"SJAG_03839":null,"SJAG_03844":null,"SJAG_03845":null,"SJAG_03867":null,"SJAG_03869":null,"SJAG_03876":null,"SJAG_03879":null,"SJAG_03883":null,"SJAG_03884":null,"SJAG_03886":null,"SJAG_03911":null,"SJAG_03916":null,"SJAG_03918":null,"SJAG_03931":null,"SJAG_03940":null,"SJAG_03942":null,"SJAG_03944":null,"SJAG_03945":null,"SJAG_03952":null,"SJAG_03967":null,"SJAG_03981":null,"SJAG_03982":null,"SJAG_03984":null,"SJAG_03997":null,"SJAG_04005":null,"SJAG_04006":null,"SJAG_04009":null,"SJAG_04018":null,"SJAG_04025":null,"SJAG_04026":null,"SJAG_04030":null,"SJAG_04036":null,"SJAG_04038":null,"SJAG_04039":null,"SJAG_04056":null,"SJAG_04061":null,"SJAG_04064":null,"SJAG_04084":null,"SJAG_04085":null,"SJAG_04092":null,"SJAG_04097":null,"SJAG_04099":null,"SJAG_04118":null,"SJAG_04130":null,"SJAG_04141":null,"SJAG_04153":null,"SJAG_04159":null,"SJAG_04186":null,"SJAG_04191":null,"SJAG_04194":null,"SJAG_04198":null,"SJAG_04205":null,"SJAG_04206":null,"SJAG_04213":null,"SJAG_04249":null,"SJAG_04253":null,"SJAG_04268":null,"SJAG_04274":null,"SJAG_04283":null,"SJAG_04291":null,"SJAG_04312":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04355":null,"SJAG_04360":null,"SJAG_04369":null,"SJAG_04373":null,"SJAG_04374":null,"SJAG_04381":null,"SJAG_04383":null,"SJAG_04388":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04407":null,"SJAG_04421":null,"SJAG_04422":null,"SJAG_04427":null,"SJAG_04435":null,"SJAG_04452":null,"SJAG_04462":null,"SJAG_04500":null,"SJAG_04509":null,"SJAG_04512":null,"SJAG_04527":null,"SJAG_04539":null,"SJAG_04544":null,"SJAG_04546":null,"SJAG_04551":null,"SJAG_04574":null,"SJAG_04576":null,"SJAG_04584":null,"SJAG_04586":null,"SJAG_04596":null,"SJAG_04601":null,"SJAG_04607":null,"SJAG_04611":null,"SJAG_04613":null,"SJAG_04614":null,"SJAG_04619":null,"SJAG_04640":null,"SJAG_04647":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04682":null,"SJAG_04705":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04755":null,"SJAG_04756":null,"SJAG_04758":null,"SJAG_04768":null,"SJAG_04771":null,"SJAG_04782":null,"SJAG_04793":null,"SJAG_04813":null,"SJAG_04818":null,"SJAG_04820":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_04873":null,"SJAG_04879":null,"SJAG_04880":null,"SJAG_04890":null,"SJAG_04921":null,"SJAG_04942":null,"SJAG_04946":null,"SJAG_04959":null,"SJAG_04989":null,"SJAG_05000":null,"SJAG_05006":null,"SJAG_05010":null,"SJAG_05014":null,"SJAG_05020":null,"SJAG_05153":null,"SJAG_05161":null,"SJAG_05187":null,"SJAG_05192":null,"SJAG_05203":null,"SJAG_05234":null,"SJAG_05240":null,"SJAG_05242":null,"SJAG_05243":null,"SJAG_05247":null,"SJAG_05265":null,"SJAG_05276":null,"SJAG_05288":null,"SJAG_05313":null,"SJAG_05322":null,"SJAG_05337":null,"SJAG_05341":null,"SJAG_05343":null,"SJAG_05694":null,"SJAG_06576":null,"SJAG_06599":null,"SJAG_06608":null,"SJAG_06638":null,"SJAG_06641":null,"SJAG_07011":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:35226668":null},"synonyms":[{"name":"regulation of anabolism","type":"exact"},{"name":"regulation of biosynthesis","type":"exact"},{"name":"regulation of formation","type":"exact"},{"name":"regulation of synthesis","type":"exact"}],"termid":"GO:0009889","terms_by_termid":{"GO:0000122":null,"GO:0000183":null,"GO:0000184":null,"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0000294":null,"GO:0000381":null,"GO:0000433":null,"GO:0000956":null,"GO:0006355":null,"GO:0006356":null,"GO:0006357":null,"GO:0006359":null,"GO:0006402":null,"GO:0006449":null,"GO:0010468":null,"GO:0010510":null,"GO:0010621":null,"GO:0010628":null,"GO:0010629":null,"GO:0010895":null,"GO:0010964":null,"GO:0010967":null,"GO:0016441":null,"GO:0016480":null,"GO:0030422":null,"GO:0030466":null,"GO:0031047":null,"GO:0031048":null,"GO:0031087":null,"GO:0031445":null,"GO:0031453":null,"GO:0031507":null,"GO:0031508":null,"GO:0031509":null,"GO:0032210":null,"GO:0032443":null,"GO:0032786":null,"GO:0032951":null,"GO:0032968":null,"GO:0033562":null,"GO:0033621":null,"GO:0033696":null,"GO:0034244":null,"GO:0036450":null,"GO:0040029":null,"GO:0043488":null,"GO:0043628":null,"GO:0045540":null,"GO:0045717":null,"GO:0045719":null,"GO:0045814":null,"GO:0045815":null,"GO:0045892":null,"GO:0045893":null,"GO:0045899":null,"GO:0045901":null,"GO:0045905":null,"GO:0045943":null,"GO:0045944":null,"GO:0045948":null,"GO:0048024":null,"GO:0048026":null,"GO:0048255":null,"GO:0060195":null,"GO:0060211":null,"GO:0060213":null,"GO:0060261":null,"GO:0060635":null,"GO:0060906":null,"GO:0060963":null,"GO:0061013":null,"GO:0061157":null,"GO:0061158":null,"GO:0061188":null,"GO:0070129":null,"GO:0070131":null,"GO:0070134":null,"GO:0070452":null,"GO:0070478":null,"GO:0070481":null,"GO:0070610":null,"GO:0070935":null,"GO:0070966":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0071042":null,"GO:0071044":null,"GO:0071072":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:0090180":null,"GO:0090334":null,"GO:0090669":null,"GO:0120271":null,"GO:0120272":null,"GO:0140018":null,"GO:0140462":null,"GO:0140718":null,"GO:0140719":null,"GO:0140727":null,"GO:0140748":null,"GO:0141005":null,"GO:0141194":null,"GO:1902373":null,"GO:1902647":null,"GO:1902648":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null,"GO:1903931":null,"GO:1904332":null,"GO:1904595":null,"GO:1904689":null,"GO:1904775":null,"GO:1905569":null,"GO:1905706":null,"GO:1905744":null,"GO:1905746":null,"GO:1990074":null,"GO:1990431":null,"GO:1990432":null,"GO:1990611":null,"GO:1990625":null,"GO:1990983":null,"GO:2000234":null,"GO:2000765":null,"GO:2000766":null,"GO:2000767":null,"GO:2000815":null,"GO:2001125":null,"GO:2001211":null}}


id: PBO:0074367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 4 pseudogene 1","termid":"PBO:0074367"}


id: PBO:0005499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L6 (predicted)","termid":"PBO:0005499"}


id: SO:0001658
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An NTR is a nested repeat of two distinct tandem motifs interspersed with each other.","definition_xrefs":["SO:AF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nested_repeat","termid":"SO:0001649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_tandem_repeat","synonyms":[{"name":"NTR","type":"exact"},{"name":"nested tandem repeat","type":"exact"}],"termid":"SO:0001658"}


id: PBO:0078280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 13-1","termid":"PBO:0078280"}


id: PBO:0075589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPINT1 antisense RNA 1","termid":"PBO:0075589"}


id: PBO:0075163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 19","termid":"PBO:0075163"}


id: GO:0031218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-galactosidic linkages in arabinogalactans.","definition_xrefs":["EC:3.2.1.89","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"arabinogalactan endo-1,4-beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.89-RXN"],"synonyms":[{"name":"arabinogalactan 4-beta-D-galactanohydrolase activity","type":"related"},{"name":"arabinogalactanase activity","type":"exact"},{"name":"endo-1,4-beta-galactanase activity","type":"exact"},{"name":"galactanase activity","type":"exact"}],"termid":"GO:0031218"}


id: GO:0030984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kininogen, a kinin precursor.","definition_xrefs":["GOC:mah","PMID:9520414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"kininogen binding","termid":"GO:0030984"}


id: GO:0032053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ciliary basal body, a short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum).","definition_xrefs":["GOC:jl","GOC:dph","GOC:krc","GOC:cilia","GOC:mah","PMID:9889124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"cilium organization","termid":"GO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"ciliary basal body organization","synonyms":[{"name":"microtubule basal body organisation","type":"broad"},{"name":"microtubule basal body organization","type":"broad"},{"name":"microtubule basal body organization and biogenesis","type":"related"}],"termid":"GO:0032053"}


id: PBO:0066147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 3","termid":"PBO:0066147"}


id: PBO:0062145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 15","termid":"PBO:0062145"}


id: PBO:0054954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2368","termid":"PBO:0054954"}


id: PBO:0110066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, implicated in rRNA processing from interactions, human TTC27 ortholog","termid":"PBO:0110066"}


id: GO:0019801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclization of asparagine to yield an L-aspartimide (otherwise known as alpha-aminosuccinimide) residue at the C-terminus of an excised intein during protein splicing.","definition_xrefs":["RESID:AA0302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"part_of","term_name":"intein-mediated protein splicing","termid":"GO:0016539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"cyclization of asparagine involved in intein-mediated protein splicing","synonyms":[{"name":"cyclization of asparagine, during protein splicing","type":"related"}],"termid":"GO:0019801"}


id: PBO:0063834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytanoyl-CoA dioxygenase domain containing 1","termid":"PBO:0063834"}


id: GO:0034430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The single layer of phopholipids surrounding a lipid storage body.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"monolayer-surrounded lipid storage body","termid":"GO:0012511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"monolayer-surrounded lipid storage body outer lipid monolayer","synonyms":[{"name":"lipid droplet outer lipid monolayer","type":"related"},{"name":"lipid storage body surface lipid monolayer","type":"exact"},{"name":"oil body outer lipid monolayer","type":"exact"},{"name":"oleosome outer lipid monolayer","type":"exact"},{"name":"spherosome outer lipid monolayer","type":"exact"}],"termid":"GO:0034430"}


id: PBO:0083283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified gene AVT3","termid":"PBO:0083283"}


id: PBO:0074898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 72","termid":"PBO:0074898"}


id: PBO:0028029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_meiotic_cell_cycle","termid":"PBO:0028029"}


id: PBO:0029561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cilofungin","termid":"PBO:0029561"}


id: SO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which bacterial RNA polymerase sigma 54 binds, to begin transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_RNApol_promoter","termid":"SO:0000613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial_RNApol_promoter_sigma54_element","synonyms":[{"name":"<new synonym>","type":"related"},{"name":"bacterial RNA polymerase promoter sigma54","type":"exact"}],"termid":"SO:0001672"}


id: PBO:0048612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 4","termid":"PBO:0048612"}


id: PBO:0029278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitin_ligase_activity","termid":"PBO:0029278"}


id: GO:0010730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of hydrogen peroxide biosynthesis. The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:hjd","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrogen peroxide metabolic process","termid":"GO:0010727"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide biosynthetic process","termid":"GO:0010728"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species biosynthetic process","termid":"GO:1903427"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide biosynthetic process","termid":"GO:0050665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide biosynthetic process","synonyms":[{"name":"negative regulation of hydrogen peroxide biosynthesis","type":"exact"}],"termid":"GO:0010730"}


id: GO:0070607
data:
  {"annotated_genes":["SJAG_02278","SJAG_00610","SJAG_04666","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90981,98951,85471,88449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of (1->3)-alpha-glucan metabolic process","termid":"GO:0070605"},{"relation_name":"regulates","term_name":"cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070597"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell wall 1,3-alpha-glucan metabolic process","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"regulation of cell wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"regulation of cell wall alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070607","terms_by_termid":{"GO:0070610":null}}


id: GO:0005696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A complex of DNA and protein that seals the end of a chromosome. The telomeric DNA consists of simple tandemly repeated sequences specific for each species. Typically one strand is G-rich and the other C-rich. The G-rich strand forms a 3'-terminal overhang, the length of which varies with species. The single strand overhang is bound by a variety of proteins, including telomere capping proteins that bind to the single-stranded DNA.","definition_xrefs":["ISBN:0198506732","PMID:11352055"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere (obsolete GO:0005696)","synonyms":[{"name":"telomere","type":"exact"}],"termid":"GO:0005696"}


id: PBO:0109973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name descirption, ANKyrin repeats","termid":"PBO:0109973"}


id: FYPO:0004577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 in subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:25398909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3-K9 trimethylation at subtelomere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 trimethylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased subtelomeric histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004577"}


id: PBO:0081340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 140","termid":"PBO:0081340"}


id: GO:2000345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte proliferation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"hepatocyte proliferation","termid":"GO:0072574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatocyte proliferation","termid":"GO:2000345"}


id: PBO:0070989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 13","termid":"PBO:0070989"}


id: PBO:0055659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3099","termid":"PBO:0055659"}


id: PBO:0057110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 199a-2","termid":"PBO:0057110"}


id: PR:G2TRM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new4 gene.","definition_xrefs":["UniProtKB:G2TRM6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.13","synonyms":[{"name":"Spom972h-new4","type":"exact"}],"termid":"PR:G2TRM6"}


id: GO:0002316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell in the spleen acquires the specialized features of a follicular B cell. Follicular B cells are major population of mature recirculating B cells in the spleen and are located in the B-cell follicle region.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular B cell differentiation","synonyms":[{"name":"follicular B cell development","type":"related"},{"name":"follicular B lymphocyte differentiation","type":"exact"},{"name":"follicular B-cell differentiation","type":"exact"},{"name":"follicular B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002316"}


id: PBO:0088787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit G","termid":"PBO:0088787"}


id: GO:0019019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A segmented viral genome consisting of three sub-genomic nucleic acids but each nucleic acid is packaged into a different virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete tripartite viral genome (obsolete GO:0019019)","termid":"GO:0019019"}


id: PBO:0059494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1 receptor","termid":"PBO:0059494"}


id: PBO:0051219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-27 (pseudogene)","termid":"PBO:0051219"}


id: FYPO:0003892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which error-prone translesion synthesis is abnormal. Error-prone translesion synthesis a DNA repair process that results in the conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication.","definition_xrefs":["PomBase:mah","GO:0042276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA repair during vegetative growth","termid":"FYPO:0000188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"abnormal error-prone translesion synthesis","synonyms":[{"name":"abnormal error-prone translesion synthesis during mitotic cell cycle","type":"related"},{"name":"abnormal error-prone translesion synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0003892"}


id: GO:2000475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of opioid receptor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of opioid receptor signaling pathway","termid":"GO:2000474"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of opioid receptor signaling pathway","synonyms":[{"name":"negative regulation of opioid receptor signalling pathway","type":"exact"}],"termid":"GO:2000475"}


id: GO:0160101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine(10) in tRNA + 2 S-adenosyl-L-methionine = 2 H+ + N(2)-dimethylguanosine(10) in tRNA + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0140098","GO:0003824","GO:0016740","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"tRNA (guanine(10)-N2)-dimethyltransferase activity","secondary_identifiers":["RHEA:43124"],"synonyms":[{"name":"N(2),N(2)-dimethylguanosine tRNA methyltransferase","type":"exact"},{"name":"tRNA (guanine(10)-N(2))-dimethyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(10)-N(2))-dimethyltransferase activity","type":"exact"}],"termid":"GO:0160101"}


id: PR:O13902
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dak1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyacetone kinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.11","synonyms":[{"name":"DHA kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dak1","type":"exact"},{"name":"glycerone kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"triokinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"triose kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13902"}


id: PBO:0064381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 3","termid":"PBO:0064381"}


id: PATO:0001985
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being kept below its freezing point.","definition_xrefs":["OBI:OBI"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature","termid":"PATO:0000146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frozen","termid":"PATO:0001985"}


id: PR:Q09668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L22-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.15","secondary_identifiers":["UniProtKB:Q09668"],"synonyms":[{"name":"Spom972h-RPL22L1","type":"exact"}],"termid":"PR:Q09668"}


id: PBO:0088618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly factor 4 Sdh8","termid":"PBO:0088618"}


id: PBO:0069864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1151, pseudogene","termid":"PBO:0069864"}


id: PBO:0016906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu31","termid":"PBO:0016906"}


id: PBO:0042598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 13","termid":"PBO:0042598"}


id: PBO:0003747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, Atf-CREB family Atf21","termid":"PBO:0003747"}


id: PBO:0050750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 12","termid":"PBO:0050750"}


id: GO:0016218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a multistep reaction that produce polyketides through decarboxylative condensation of carboxylic acids. The key chain-building reaction, a C-N bond-forming reaction, involves the generation of the characteristic peptide bond by nucleophilic attack of the amino group of an amino-acyl donor unit covalently bound to a downstream peptidyl carrier protein module (amino acyl-S-PCP) on the acyl group of an upstream electrophilic acyl- or peptidyl acyl-S-PCP chain, catalyzed by a condensation (C) domain. Supplementing these core chain-elongation domains are variable numbers of auxiliary domains that are responsible for modification of the growing polypeptide chain by a small set of iterated reactions including epimerization, N-methylation, and heterocyclization.","definition_xrefs":["PMID:10631508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674"],"is_obsolete":false,"name":"polyketide synthase activity","synonyms":[{"name":"PKS activity","type":"related"}],"termid":"GO:0016218"}


id: PBO:0058878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10394","termid":"PBO:0058878"}


id: PBO:0086116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for cytoplasm to vacuole targeting of proteins; forms a complex with Far3p and Far7p to Far11p involved in recovery from pheromone-induced cell cycle arrest; mutant has increased aneuploidy tolerance; VPS64 has a paralog, FAR10, that arose from the whole genome duplication","termid":"PBO:0086116"}


id: FYPO:0002060
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115291,115292,115294,115290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"}],"single_locus_phenotype":[{"annotations":[115337,115349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004481"},{"annotations":[115327,115648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000082"},{"annotations":[115279,115293,115278,115559,115277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000080"},{"annotations":[115506,115673,115458,115462,115466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001355"},{"annotations":[115540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"},{"annotations":[115773,115496,115497,115495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001357"},{"annotations":[115303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001408"},{"annotations":[115779,115538,115557,115401,115720,115721,115537,115494,115731,115558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001234"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in the population are viable in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_00409":null,"SJAG_00426":null,"SJAG_00429":null,"SJAG_00514":null,"SJAG_00601":null,"SJAG_01242":null,"SJAG_01355":null,"SJAG_01794":null,"SJAG_01946":null,"SJAG_02527":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03198":null,"SJAG_03449":null,"SJAG_03453":null,"SJAG_03575":null,"SJAG_03720":null,"SJAG_03892":null,"SJAG_04464":null,"SJAG_04697":null,"SJAG_04703":null,"SJAG_05207":null},"genotype_count":29,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta":{"display_name":"apc2-361(E548K ts) cem1delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts) oar2-51(Y189D cold sensitive)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"apc2-361(E548K ts) oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta":{"display_name":"apc2-361(E548K ts) oar2delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cem1delta":{"display_name":"cem1delta","display_uniquename":"cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-51(Y189D cold sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"oar2delta":{"display_name":"oar2delta","display_uniquename":"oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03198","SJAG_01946","SJAG_03575"],"name":"viable vegetative cell population","references_by_uniquename":{"PMID:23090706":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_00409","SJAG_01794","SJAG_00266","SJAG_00601","SJAG_04464","SJAG_03720","SJAG_00426","SJAG_00364","SJAG_02763","SJAG_02592","SJAG_01946","SJAG_01355","SJAG_01242","SJAG_03453","SJAG_04697","SJAG_02527","SJAG_03449","SJAG_00514","SJAG_00429","SJAG_04703","SJAG_03198","SJAG_03892","SJAG_05207"],"single_locus_genotype_uniquenames":["sty1delta","gpd1delta","tel1delta","oar2delta","cmp7delta","rip1delta","cox6delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","for3delta","rad26delta","vps4delta","vps32delta","atf1delta","ned1delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","cem1delta","rad3delta","gms1delta","scd2delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","ras1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","scd1delta"],"synonyms":[{"name":"viable cell population during vegetative growth","type":"exact"},{"name":"viable vegetative cell population during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002060","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000103":null,"FYECO:0000117":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0000674":null,"FYPO:0001234":null,"FYPO:0001355":null,"FYPO:0001357":null,"FYPO:0001408":null,"FYPO:0001690":null,"FYPO:0004481":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0072311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 8","termid":"PBO:0072311"}


id: PBO:0067449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 571, pseudogene","termid":"PBO:0067449"}


id: GO:0033491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving coniferin, 4-(3-hydroxyprop-1-en-1-yl)-2-methoxyphenyl beta-D-glucopyranoside.","definition_xrefs":["GOC:mah","MetaCyc:PWY-116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"coniferin metabolic process","synonyms":[{"name":"coniferin metabolism","type":"exact"}],"termid":"GO:0033491"}


id: PBO:0034803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy serine/threonine protein kinase Atg1","termid":"PBO:0034803"}


id: GO:0016466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in archae.","definition_xrefs":["TC:3.A.2.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating A-type ATPase activity (obsolete GO:0016466)","synonyms":[{"name":"hydrogen-translocating A-type ATPase activity","type":"exact"},{"name":"proton-translocating A-type ATPase activity","type":"exact"}],"termid":"GO:0016466"}


id: GO:0042129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell proliferation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"regulates","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell proliferation","synonyms":[{"name":"regulation of T lymphocyte proliferation","type":"exact"},{"name":"regulation of T-cell proliferation","type":"exact"},{"name":"regulation of T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0042129"}


id: GO:0021659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 3. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 3 morphogenesis","termid":"GO:0021658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 structural organization","synonyms":[{"name":"rhombomere 3 structural organisation","type":"exact"}],"termid":"GO:0021659"}


id: PBO:0060569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 5, pseudogene","termid":"PBO:0060569"}


id: PBO:0075402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm autoantigenic protein 17 pseudogene 1","termid":"PBO:0075402"}


id: PBO:0041858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 4 like, pseudogene","termid":"PBO:0041858"}


id: GO:0015313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + fluconazole(in) = H+(in) + fluconazole(out).","definition_xrefs":["TC:2.A.1.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluconazole transmembrane transporter activity","termid":"GO:0015244"},{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"fluconazole:proton antiporter activity","synonyms":[{"name":"fluconazole:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015313"}


id: PBO:0091773
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae CDC6","termid":"PBO:0091773"}


id: PBO:0084933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA N6-adenosine methyltransferase; essential for meiosis in S288C but dispensable for meiosis in SK1, mediates N6-adenosine methylation of bulk mRNA during the induction of sporulation which includes the meiotic regulators IME1, IME2 and IME4 itself; repressed in haploids via production of antisense IME4 transcripts; transcribed in diploid cells where antisense transcription is repressed; orthologous to human METTL3 (MT-A70)","termid":"PBO:0084933"}


id: GO:1990090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus.","definition_xrefs":["Wikipedia:Nerve_growth_factor","PMID:22399805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to nerve growth factor","termid":"GO:1990089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nerve growth factor stimulus","synonyms":[{"name":"cellular response to NGF","type":"exact"}],"termid":"GO:1990090"}


id: GO:0002755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A toll-like receptor signaling pathway in which the MyD88 adaptor molecule mediates transduction of the signal. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["ISBN:0781735149","PMID:12467241","PMID:12524386","GOC:add","PMID:12855817","PMID:15585605","PMID:15728447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"MyD88-dependent toll-like receptor signaling pathway","synonyms":[{"name":"MyD88-dependent TLR signaling pathway","type":"exact"},{"name":"MyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002755"}


id: PBO:0056170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase activating death domain","termid":"PBO:0056170"}


id: PBO:0075453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 5","termid":"PBO:0075453"}


id: PBO:0054625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2030","termid":"PBO:0054625"}


id: PBO:0113305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in establishment of cell polarity and bud emergence; regulates filamentous-growth mitogen-activated protein kinase (MAPK) pathway; interacts with the Rho1p small GTP-binding protein, the pleckstrin homology (PH) domain of Cdc24p, and with the Rho-type GTPase Cdc42p; stabilizes Cdc42p levels, resulting in elevated fMAPK pathway signaling; involved in maintenance of proper telomere length","termid":"PBO:0113305"}


id: PBO:0068143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 450","termid":"PBO:0068143"}


id: PBO:0046635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 16","termid":"PBO:0046635"}


id: GO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a plastid PEP-B RNA polymerase II specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH","PMID:20701995"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid PEP-B RNA polymerase activity (obsolete GO:0001063)","termid":"GO:0001063"}


id: PBO:0111781
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein","termid":"PBO:0111781"}


id: PBO:0067655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 832, pseudogene","termid":"PBO:0067655"}


id: GO:0033755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 sulfur + 4 H2O + O2 = 2 hydrogen sulfide + 2 bisulfite + 2 H+.","definition_xrefs":["PMID:1522063","EC:1.13.11.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfur oxygenase/reductase activity","secondary_identifiers":["MetaCyc:1.13.11.55-RXN","RHEA:13957"],"synonyms":[{"name":"SOR","type":"related"},{"name":"sulfur oxygenase activity","type":"broad"},{"name":"sulfur:oxygen oxidoreductase (hydrogen-sulfide- and sulfite-forming) activity","type":"related"},{"name":"sulphur oxygenase/reductase activity","type":"exact"}],"termid":"GO:0033755"}


id: PBO:0017854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transmembrane transporter Abc3, unknown specificity","termid":"PBO:0017854"}


id: GO:1900578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gerfelin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"gerfelin metabolic process","termid":"GO:1900576"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gerfelin biosynthetic process","synonyms":[{"name":"gerfelin anabolism","type":"exact"},{"name":"gerfelin biosynthesis","type":"exact"},{"name":"gerfelin formation","type":"exact"},{"name":"gerfelin synthesis","type":"exact"}],"termid":"GO:1900578"}


id: PBO:0068326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 31","termid":"PBO:0068326"}


id: GO:1902243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of copal-8-ol diphosphate(3-).","definition_xrefs":["GOC:TermGenie","PMID:22672125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"copal-8-ol diphosphate(3-) metabolic process","termid":"GO:1902241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"copal-8-ol diphosphate(3-) biosynthetic process","synonyms":[{"name":"copal-8-ol diphosphate(3-) anabolism","type":"exact"},{"name":"copal-8-ol diphosphate(3-) biosynthesis","type":"exact"},{"name":"copal-8-ol diphosphate(3-) formation","type":"exact"},{"name":"copal-8-ol diphosphate(3-) synthesis","type":"exact"}],"termid":"GO:1902243"}


id: PBO:0052835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 1-5","termid":"PBO:0052835"}


id: GO:0002828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a type 2 immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type 2 immune response","synonyms":[{"name":"regulation of T-helper 2 type immune response","type":"narrow"},{"name":"regulation of Th2 immune response","type":"narrow"}],"termid":"GO:0002828"}


id: PBO:0012258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 6","termid":"PBO:0012258"}


id: GO:0047533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopentanoate + NADP+ + H2O = 2-oxoglutarate + NADPH + H+.","definition_xrefs":["MetaCyc:25-DIOXOVALERATE-DEHYDROGENASE-RXN","EC:1.2.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,5-dioxovalerate dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:11296"],"synonyms":[{"name":"2,5-dioxopentanoate:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047533"}


id: CHEBI:24431
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemical entity","termid":"CHEBI:24431"}


id: GO:0030367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-17 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-17 receptor binding","synonyms":[{"name":"IL-17","type":"narrow"},{"name":"interleukin-17 receptor ligand","type":"narrow"}],"termid":"GO:0030367"}


id: PBO:0088785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA biosynthesis protein","termid":"PBO:0088785"}


id: PR:Q9UT92
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC323.07c gene.","definition_xrefs":["UniProtKB:Q9UT92","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C323.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.07c","synonyms":[{"name":"Spom972h-SPAC323.07c","type":"exact"}],"termid":"PR:Q9UT92"}


id: GO:0071547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A P granule that contains the PIWIL4-TDRD9 module, a set of proteins that act in the secondary piRNA pathway.","definition_xrefs":["PMID:20011505","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule","termid":"GO:0043186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"piP-body","termid":"GO:0071547"}


id: FYPO:0004943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, morphology, or other physical characteristic of the mitochondrion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitochondrion","synonyms":[{"name":"abnormal mitochondria","type":"exact"},{"name":"abnormal mitochondrion during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrion during vegetative growth","type":"exact"}],"termid":"FYPO:0004943"}


id: GO:1903525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane tubulation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18388313","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"regulates","term_name":"plasma membrane tubulation","termid":"GO:0097320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of membrane tubulation","synonyms":[{"name":"regulation of plasma membrane tubulation","type":"exact"},{"name":"regulation of vesicle scission","type":"related"}],"termid":"GO:1903525"}


id: PBO:0013086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, Dbl3","termid":"PBO:0013086"}


id: GO:1904578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thapsigargin stimulus.","definition_xrefs":["PMID:23106379","GO_REF:0000071","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete response to thapsigargin (obsolete GO:1904578)","termid":"GO:1904578"}


id: GO:0072192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell in the urothelium. The urothelium is the epithelial tube of the ureter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"ureter urothelium development","termid":"GO:0072190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter epithelial cell differentiation","termid":"GO:0072192"}


id: FYPO:0003900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a triphosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal triphosphatase activity","termid":"FYPO:0003899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased triphosphatase activity","synonyms":[{"name":"reduced triphosphatase activity","type":"exact"}],"termid":"FYPO:0003900"}


id: PBO:0027989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_abnormal_septum_morphology","termid":"PBO:0027989"}


id: PBO:0067373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 474, pseudogene","termid":"PBO:0067373"}


id: PBO:0038622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline ceramidase 3","termid":"PBO:0038622"}


id: GO:2000428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neutrophil aggregation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"regulates","term_name":"neutrophil aggregation","termid":"GO:0070488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of neutrophil aggregation","synonyms":[{"name":"regulation of neutrocyte aggregation","type":"exact"},{"name":"regulation of neutrophil leucocyte aggregation","type":"exact"},{"name":"regulation of neutrophilic leukocyte aggregation","type":"exact"}],"termid":"GO:2000428"}


id: PBO:0055286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2713","termid":"PBO:0055286"}


id: GO:0033482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-galacturonate, the D-enantiomer of galacturonate, the anion of galacturonic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonate biosynthetic process","termid":"GO:0033481"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"D-galacturonate metabolic process","termid":"GO:0046396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-galacturonate biosynthetic process","synonyms":[{"name":"D-galacturonate anabolism","type":"exact"},{"name":"D-galacturonate biosynthesis","type":"exact"},{"name":"D-galacturonate formation","type":"exact"},{"name":"D-galacturonate synthesis","type":"exact"}],"termid":"GO:0033482"}


id: PBO:0057098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 193b","termid":"PBO:0057098"}


id: PBO:0064371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral myelin protein 2","termid":"PBO:0064371"}


id: GO:0061254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric glomerular parietal epithelial cell over time, from its formation to the mature structure. Mesonephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular epithelial cell development","termid":"GO:0061251"},{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell development","termid":"GO:0072016"},{"relation_name":"part_of","term_name":"mesonephric glomerular parietal epithelial cell differentiation","termid":"GO:0061253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular parietal epithelial cell development","termid":"GO:0061254"}


id: PBO:0061515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 5","termid":"PBO:0061515"}


id: PBO:0081392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 232","termid":"PBO:0081392"}


id: FYPO:0003606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of prophase of the first meiotic nuclear division is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"decreased duration of meiotic cell cycle phase","termid":"FYPO:0006851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of meiotic prophase I","synonyms":[{"name":"reduced duration of meiotic prophase I","type":"exact"},{"name":"short meiotic prophase I","type":"exact"}],"termid":"FYPO:0003606"}


id: PBO:0075978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 4","termid":"PBO:0075978"}


id: FYPO:0005522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed in the forward direction from the centromere outer repeat region are present at greater levels than normal.","definition_xrefs":["PMID:22990236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric outer repeat transcript level","termid":"FYPO:0000220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased forward centromeric outer repeat transcript level","synonyms":[{"name":"increased accumulation of forward centromeric outer repeat transcripts","type":"related"},{"name":"increased accumulation of forward centromeric outer repeat transcripts during vegetative growth","type":"related"},{"name":"increased accumulation of forward non-coding outer repeat transcripts","type":"exact"},{"name":"increased forward centromere outer repeat transcript level","type":"exact"},{"name":"increased forward centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"increased forward centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"increased forward centromeric outer repeat-derived transcript level","type":"exact"},{"name":"increased level of forward centromeric outer repeat transcripts","type":"exact"}],"termid":"FYPO:0005522"}


id: PBO:0082506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of mitochondrial inner membrane peptidase complex; required for maturation of mitochondrial proteins of the intermembrane space; complex contains two catalytic subunits (Imp1p and Imp2p that differ in substrate specificty) and Som1p","termid":"PBO:0082506"}


id: GO:0051271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of a cellular component.","definition_xrefs":["GOC:jl","GOC:ai","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular component movement (obsolete GO:0051271)","synonyms":[{"name":"negative regulation of cellular component motion","type":"exact"}],"termid":"GO:0051271"}


id: PBO:0003734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51 (predicted)","termid":"PBO:0003734"}


id: FYPO:0003119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyadenylated messenger RNA (mRNA) measured in the nucleus is higher than normal. Total mRNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nuclear RNA level during vegetative growth","termid":"FYPO:0000911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0002403","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased nuclear polyadenylated mRNA level during vegetative growth","synonyms":[{"name":"increased nuclear poly(A)+ mRNA level during vegetative growth","type":"exact"},{"name":"increased nuclear polyadenylated mRNA accumulation during vegetative growth","type":"related"},{"name":"increased nuclear polyadenylated mRNA level during mitotic cell cycle","type":"related"},{"name":"increased nuclear polyadenylated mRNA transcript level during vegetative growth","type":"exact"},{"name":"increased nuclear polyadenylated messenger RNA level during vegetative growth","type":"exact"},{"name":"nuclear poly(A)+ mRNA accumulation","type":"related"},{"name":"nuclear poly-A mRNA accumulation","type":"related"}],"termid":"FYPO:0003119"}


id: PBO:0063518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDXDC2P-NPIPB14P readthrough, transcribed pseudogene","termid":"PBO:0063518"}


id: SO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 11th residue (a lysine), from the start of the H2AZ histone protein is acetylated.","definition_xrefs":["PMID:19385636","PMID:24316985","PMID:27087541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2AZ_acetylation_site","termid":"SO:0002144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AZK11_acetylation_site","synonyms":[{"name":"H2A.ZK11ac","type":"exact"},{"name":"H2AZK11 acetylation site","type":"exact"},{"name":"H2AZK11ac","type":"exact"}],"termid":"SO:0002147"}


id: GO:0000313
data:
  {"annotated_genes":["SJAG_05218","SJAG_00628","SJAG_03192","SJAG_03402","SJAG_00105","SJAG_07009","SJAG_01045","SJAG_01473","SJAG_04216","SJAG_00315","SJAG_01767","SJAG_03040","SJAG_01303","SJAG_04893","SJAG_00860","SJAG_06110","SJAG_03053","SJAG_04918","SJAG_01468","SJAG_04019","SJAG_02777","SJAG_01734","SJAG_04173","SJAG_00497","SJAG_03649","SJAG_01463","SJAG_01591","SJAG_04889","SJAG_02324","SJAG_04244","SJAG_00889","SJAG_04207","SJAG_00060","SJAG_01520","SJAG_00513","SJAG_04164","SJAG_01719","SJAG_05270","SJAG_05320","SJAG_01829","SJAG_00799","SJAG_03459","SJAG_00782","SJAG_00148","SJAG_03297","SJAG_02452","SJAG_05573","SJAG_02067","SJAG_03065","SJAG_04490","SJAG_04378","SJAG_00086","SJAG_02071","SJAG_01727","SJAG_04788","SJAG_02359","SJAG_04689","SJAG_03284","SJAG_01478","SJAG_01413","SJAG_02762","SJAG_05244","SJAG_02201","SJAG_00944","SJAG_04493","SJAG_04494","SJAG_03584","SJAG_01630","SJAG_05221","SJAG_00844","SJAG_03636","SJAG_02836","SJAG_03176","SJAG_06253","SJAG_02643","SJAG_04753","SJAG_04281"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85506,95175,104356,100973,87487,102869,105973,101967,106913,98713,84387,111531,101820,98018,104209,112323,94727,100478,110746,114097,92319,111398,104309,109603,113175,99799,94053,108609,94032,97177,107240,108371,85056,92280,108869,113289,110866,99436,111578,109045,99545,110468,112435,92962,92658],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005762"},{"annotations":[106805,90531,89691,100119,88100,104213,94057,104068,102508,114250,99464,106517,100049,98405,90517,105489,104469,91977,85961,99185,104715,92692,85908,108509,91393,102144,90232,111751,112180,106269,94294,94056],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"A ribosome contained within a subcellular membrane-bounded organelle.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome","termid":"GO:0005840"},{"relation_name":"part_of","term_name":"organelle","termid":"GO:0043226"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00086":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00315":null,"SJAG_00497":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01045":null,"SJAG_01303":null,"SJAG_01413":null,"SJAG_01463":null,"SJAG_01468":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01520":null,"SJAG_01591":null,"SJAG_01630":null,"SJAG_01719":null,"SJAG_01727":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_01829":null,"SJAG_02067":null,"SJAG_02071":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02762":null,"SJAG_02777":null,"SJAG_02836":null,"SJAG_03040":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03402":null,"SJAG_03459":null,"SJAG_03584":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_04019":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04494":null,"SJAG_04689":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_04918":null,"SJAG_05218":null,"SJAG_05221":null,"SJAG_05244":null,"SJAG_05270":null,"SJAG_05320":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_07009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organellar ribosome","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000313","terms_by_termid":{"GO:0005762":null,"GO:0005763":null}}


id: PBO:0068040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 345","termid":"PBO:0068040"}


id: PBO:0059344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S10 pseudogene 5","termid":"PBO:0059344"}


id: PBO:0028166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caffeine_during_cellular_response_to_hydroxyurea","termid":"PBO:0028166"}


id: FYPO:0009030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amitrole than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to amitrole","synonyms":[{"name":"resistance to amitrole during mitotic cell cycle","type":"related"},{"name":"resistance to amitrole during vegetative growth","type":"exact"},{"name":"resistant to amitrole","type":"exact"}],"termid":"FYPO:0009030"}


id: PBO:0085285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal protein; identification as a delta(3,5)-delta(2,4)-dienoyl-CoA isomerase involved in fatty acid metabolism is disputed; DCI1 has a paralog, ECI1, that arose from the whole genome duplication","termid":"PBO:0085285"}


id: GO:0061434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of replicative cell aging through a mechanism that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a caloric restriction stimulus.","definition_xrefs":["GOC:dph","PMID:17914901"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of replicative cell aging by regulation of transcription from RNA polymerase II promoter in response to caloric restriction (obsolete GO:0061434)","termid":"GO:0061434"}


id: PBO:0003129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh4 (predicted)","termid":"PBO:0003129"}


id: PBO:0083843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exomer-dependent cargo protein; induces appearance of [PIN+] prion when overproduced; prion-like domain serves as a retention signal in the trans-Golgi network; predicted to be palmitoylated","termid":"PBO:0083843"}


id: GO:0035919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a low voltage-gated calcium channel in another organism. A low voltage-gated channel is a channel whose open state is dependent on low voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:fj","GOC:bf","PMID:20920515","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of voltage-gated calcium channel activity in another organism","termid":"GO:0035918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of low voltage-gated calcium channel activity in another organism","synonyms":[{"name":"down-regulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"downregulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"inhibition of low voltage-gated calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of low voltage gated calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-dependent calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035919"}


id: PBO:0059426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocardin related transcription factor A","termid":"PBO:0059426"}


id: PBO:0088980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase involved in very long-chain fatty acid elongation Phs1","termid":"PBO:0088980"}


id: PBO:0089144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorelay sensor kinase Mak3","termid":"PBO:0089144"}


id: GO:0070767
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains BRCA1 and Rad 51, and is involved in the control of recombination and of genome integrity.","definition_xrefs":["PMID:9008167","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"BRCA1-Rad51 complex","termid":"GO:0070767"}


id: GO:0000340
data:
  {"annotated_genes":["SJAG_00507","SJAG_01830","SJAG_03223","SJAG_01625","SJAG_04360"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85936,95858,100872,109634,111541],"is_not":false,"summary":null,"term":"GO:0000340"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine group added cotranscriptionally to the 5' end of RNA molecules transcribed by polymerase II.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding","termid":"GO:0000339"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01625":null,"SJAG_01830":null,"SJAG_03223":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"RNA 7-methylguanosine cap binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA m7G cap binding","type":"exact"}],"termid":"GO:0000340","terms_by_termid":{"GO:0000340":null}}


id: GO:1901045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oviposition.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of egg-laying behavior","termid":"GO:0046662"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of egg-laying behavior","synonyms":[{"name":"down regulation of egg laying","type":"broad"},{"name":"down regulation of egg-laying","type":"broad"},{"name":"down regulation of oviposition","type":"exact"},{"name":"down-regulation of egg laying","type":"broad"},{"name":"down-regulation of egg-laying","type":"broad"},{"name":"down-regulation of oviposition","type":"exact"},{"name":"downregulation of egg laying","type":"broad"},{"name":"downregulation of egg-laying","type":"broad"},{"name":"downregulation of oviposition","type":"exact"},{"name":"inhibition of egg laying","type":"broad"},{"name":"inhibition of egg-laying","type":"broad"},{"name":"inhibition of oviposition","type":"narrow"},{"name":"negative regulation of egg laying","type":"broad"},{"name":"negative regulation of egg-laying","type":"broad"},{"name":"negative regulation of oviposition","type":"exact"}],"termid":"GO:1901045"}


id: GO:1903542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exosomal secretion.","definition_xrefs":["PMID:24105262","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of exosomal secretion","termid":"GO:1903541"},{"relation_name":"negatively_regulates","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of exosomal secretion","synonyms":[{"name":"down regulation of exosomal protein secretion","type":"narrow"},{"name":"down regulation of exosomal secretion","type":"exact"},{"name":"down regulation of exosomal secretory pathway","type":"exact"},{"name":"down regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"down regulation of secretion of exosome","type":"exact"},{"name":"down-regulation of exosomal protein secretion","type":"narrow"},{"name":"down-regulation of exosomal secretion","type":"exact"},{"name":"down-regulation of exosomal secretory pathway","type":"exact"},{"name":"down-regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"down-regulation of secretion of exosome","type":"exact"},{"name":"downregulation of exosomal protein secretion","type":"narrow"},{"name":"downregulation of exosomal secretion","type":"exact"},{"name":"downregulation of exosomal secretory pathway","type":"exact"},{"name":"downregulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"downregulation of secretion of exosome","type":"exact"},{"name":"inhibition of exosomal protein secretion","type":"narrow"},{"name":"inhibition of exosomal secretion","type":"narrow"},{"name":"inhibition of exosomal secretory pathway","type":"narrow"},{"name":"inhibition of extracellular vesicular exosome secretion","type":"narrow"},{"name":"inhibition of secretion of exosome","type":"narrow"},{"name":"negative regulation of exosomal protein secretion","type":"narrow"},{"name":"negative regulation of exosomal secretory pathway","type":"exact"},{"name":"negative regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"negative regulation of secretion of exosome","type":"exact"}],"termid":"GO:1903542"}


id: SO:1000143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LS is an autosynaptic chromosome carrying the two left (L = levo) telomeres.","definition_xrefs":["FB:manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosynaptic_chromosome","termid":"SO:1000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laevosynaptic_chromosome","synonyms":[{"name":"laevosynaptic chromosome","type":"exact"}],"termid":"SO:1000143"}


id: PBO:0059425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRS2 pseudogene 2","termid":"PBO:0059425"}


id: FYPO:0005353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the RTS1 barrier is normal (i.e. indistinguishable from wild type). Note that the RTS1 barrier usually occurs in the mating type locus, but might be assayed at ectopic loci to maximise the distance that a restarted fork travels.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal replication fork arrest","termid":"FYPO:0008191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal replication fork arrest at RTS1 barrier","synonyms":[{"name":"normal replication fork arrest at mating-type locus","type":"related"},{"name":"normal replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"normal replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005353"}


id: PR:O94369
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1604.03c gene.","definition_xrefs":["UniProtKB:O94369","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.03c","synonyms":[{"name":"Spom972h-SPBC1604.03c","type":"exact"}],"termid":"PR:O94369"}


id: PBO:0039465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 13B","termid":"PBO:0039465"}


id: PBO:0058972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malectin","termid":"PBO:0058972"}


id: GO:0140059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic tree are generated and organized into dendritic branches.","definition_xrefs":["PMID:23270857","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"is_a","term_name":"neuron projection arborization","termid":"GO:0140058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite arborization","termid":"GO:0140059"}


id: MOD:01146
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(6-FAD)-L-cystine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(6-FAD)-L-cysteine","synonyms":[{"name":"FAD","type":"related"},{"name":"S6FADCys","type":"exact"}],"termid":"MOD:01146"}


id: GO:0021932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radially directed movement of a cell along radial glial cells in the hindbrain. Radial migration refers to a directed movement from the internal ventricular area to the outer surface of the hindbrain.","definition_xrefs":["PMID:15157725","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain radial glia guided cell migration","termid":"GO:0021932"}


id: PBO:0050556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HR lysine demethylase and nuclear receptor corepressor","termid":"PBO:0050556"}


id: FYPO:0005500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements does not occur during a cellular response to miconazole.","definition_xrefs":["PomBase:mah","PMID:26108447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription from CRE promoter","termid":"FYPO:0005497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished transcription from CRE promoter during cellular response to miconazole","synonyms":[{"name":"abolished transcription from CRE promoter during cellular response to miconazole during mitotic cell cycle","type":"related"},{"name":"abolished transcription from CRE promoter during cellular response to miconazole during vegetative growth","type":"exact"},{"name":"expression of CRE target genes abolished during cellular response to miconazole","type":"related"},{"name":"transcription from CRE promoter abolished during cellular response to miconazole","type":"exact"}],"termid":"FYPO:0005500"}


id: PBO:0004233
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypercalciuric nephrolithiasis","termid":"PBO:0004233"}


id: GO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + O2 = N-formyl-L-kynurenine.","definition_xrefs":["EC:1.13.11.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tryptophan 2,3-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-198563","Reactome:R-HSA-888614","MetaCyc:TRYPTOPHAN-23-DIOXYGENASE-RXN","GO:0004426","Reactome:R-HSA-71188","RHEA:24536"],"synonyms":[{"name":"L-tryptophan 2,3-dioxygenase activity","type":"related"},{"name":"L-tryptophan pyrrolase activity","type":"related"},{"name":"L-tryptophan:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"TDO","type":"related"},{"name":"indolamine 2,3-dioxygenase activity","type":"broad"},{"name":"indoleamine-pyrrole 2,3-dioxygenase activity","type":"exact"},{"name":"tryptamin 2,3-dioxygenase activity","type":"related"},{"name":"tryptamine 2,3-dioxygenase activity","type":"related"},{"name":"tryptophan oxygenase activity","type":"broad"},{"name":"tryptophan peroxidase activity","type":"broad"},{"name":"tryptophan pyrrolase activity","type":"broad"}],"termid":"GO:0004833"}


id: GO:0019558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-histidine catabolic process to 2-oxoglutarate","synonyms":[{"name":"histidine breakdown to 2-oxoglutarate","type":"exact"},{"name":"histidine catabolic process to 2-ketoglutarate","type":"exact"},{"name":"histidine catabolic process to 2-oxoglutarate","type":"broad"},{"name":"histidine catabolic process to alpha-ketoglutarate","type":"exact"},{"name":"histidine catabolic process to alpha-oxoglutarate","type":"exact"},{"name":"histidine catabolism to 2-ketoglutarate","type":"exact"},{"name":"histidine catabolism to alpha-ketoglutarate","type":"exact"},{"name":"histidine catabolism to alpha-oxoglutarate","type":"exact"},{"name":"histidine degradation to 2-oxoglutarate","type":"exact"}],"termid":"GO:0019558"}


id: PBO:0048601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ghrelin opposite strand/antisense RNA","termid":"PBO:0048601"}


id: GO:1902351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an imidacloprid stimulus.","definition_xrefs":["PMID:23922869","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to imidacloprid","termid":"GO:1902351"}


id: PBO:0076045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 1","termid":"PBO:0076045"}


id: GO:0032200
data:
  {"annotated_genes":["SJAG_04372","SJAG_01378","SJAG_04245","SJAG_04150","SJAG_00364","SJAG_00939","SJAG_00559","SJAG_04186","SJAG_03916","SJAG_03855","SJAG_06597","SJAG_05372","SJAG_00429","SJAG_02771","SJAG_01579","SJAG_00934","SJAG_05105","SJAG_03128","SJAG_00756","SJAG_05173","SJAG_01263","SJAG_02778","SJAG_03624","SJAG_02079","SJAG_04863","SJAG_02576","SJAG_02212","SJAG_05979","SJAG_03722","SJAG_06642","SJAG_04574","SJAG_03780","SJAG_03685","SJAG_02621","SJAG_01675","SJAG_02362","SJAG_01068","SJAG_00676","SJAG_03982","SJAG_03843","SJAG_01677","SJAG_03720","SJAG_04183","SJAG_02401","SJAG_05373","SJAG_05353","SJAG_02119","SJAG_03997","SJAG_01377","SJAG_00640","SJAG_04266","SJAG_01605","SJAG_02116","SJAG_03026","SJAG_01540","SJAG_04586","SJAG_03680","SJAG_01864","SJAG_02563","SJAG_02194","SJAG_02409","SJAG_01777","SJAG_01410","SJAG_03844","SJAG_04039","SJAG_01601","SJAG_03092","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87860,102070],"is_not":false,"summary":null,"term":"GO:0032200"},{"annotations":[93255],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032215"},{"annotations":[101218,85798],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031848"},{"annotations":[91133],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[99335,107415,109453,114270,104294,109829,110152,100211,86085,108259,90124,95211,114992,92798,100308,94335,113879,106627,86243,87297,88098,84464],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031509"},{"annotations":[85799,112111,87857,101219,110764,95803,106506,91134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016233"},{"annotations":[108672,105511,107880,110443,104165,87456,108980,92236,88553,112408,113029,102734,105687,102256,95145,102069,107881,107700,85205,104061,95804,100273,95271,103887,87858,112429,85155,95812,85800,101220,107086,107678,84584,112112,91135,96942,106507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000723"},{"annotations":[88754,107882,109096,109099,85206,88752,88755,88753,109100,92237,109097,109098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"},{"annotations":[95805,104062,109984,112113,86668,85207,107701,104249,86669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"},{"annotations":[87859,102257,101221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010833"},{"annotations":[112114,104250,95806],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905324"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of telomeres, terminal regions of a linear chromosome that include the telomeric DNA repeats and associated proteins.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":68,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00559":null,"SJAG_00640":null,"SJAG_00676":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_00939":null,"SJAG_01068":null,"SJAG_01263":null,"SJAG_01377":null,"SJAG_01378":null,"SJAG_01410":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01605":null,"SJAG_01675":null,"SJAG_01677":null,"SJAG_01777":null,"SJAG_01832":null,"SJAG_01864":null,"SJAG_02079":null,"SJAG_02116":null,"SJAG_02119":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02362":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02621":null,"SJAG_02771":null,"SJAG_02778":null,"SJAG_03026":null,"SJAG_03092":null,"SJAG_03128":null,"SJAG_03624":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03844":null,"SJAG_03855":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04039":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04186":null,"SJAG_04245":null,"SJAG_04266":null,"SJAG_04372":null,"SJAG_04574":null,"SJAG_04586":null,"SJAG_04863":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_05979":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telomere organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome organization, telomeric","type":"exact"},{"name":"organization of chromosome, telomeric region","type":"exact"},{"name":"telomere organisation","type":"exact"},{"name":"telomere organization and biogenesis","type":"related"}],"termid":"GO:0032200","terms_by_termid":{"GO:0000722":null,"GO:0000723":null,"GO:0007004":null,"GO:0010833":null,"GO:0016233":null,"GO:0031509":null,"GO:0031848":null,"GO:0032200":null,"GO:0032210":null,"GO:0032215":null,"GO:1905324":null}}


id: GO:0005343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: organic acid(out) + Na+(out) = organic acid(in) + Na+(in).","definition_xrefs":["TC:2.A.28.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid transmembrane transporter activity","termid":"GO:0005342"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"organic acid:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-8876312"],"synonyms":[{"name":"sodium/chloride-dependent organic acid cotransporter activity","type":"related"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"narrow"}],"termid":"GO:0005343"}


id: FYECO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which biochanin A (BCA) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ biochanin A","synonyms":[{"name":"BCA added","type":"exact"}],"termid":"FYECO:0000209"}


id: PBO:0050119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 29","termid":"PBO:0050119"}


id: GO:0045237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR1 chemokine receptor.","definition_xrefs":["GOC:ceb","PMID:11910892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-8 receptor binding","termid":"GO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CXCR1 chemokine receptor binding","synonyms":[{"name":"CXCR1 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0045237"}


id: SO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A loop in ribosomal RNA containing the sites of attack for ricin and sarcin.","direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric_RNA_internal_loop","termid":"SO:0000021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcin_like_RNA_motif","synonyms":[{"name":"sarcin like RNA motif","type":"exact"},{"name":"sarcin/ricin RNA domain","type":"exact"},{"name":"sarcin/ricin domain","type":"exact"},{"name":"sarcin/ricin loop","type":"exact"}],"termid":"SO:0000024"}


id: PBO:0049010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1","termid":"PBO:0049010"}


id: PBO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_substance","termid":"PBO:0006180"}


id: PR:O74826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquinone biosynthesis protein COQ7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02696","PANTHER:PTHR11237:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-demethoxyubiquinone hydroxylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.15c","secondary_identifiers":["UniProtKB:O74826"],"synonyms":[{"name":"DMQ hydroxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COQ7","type":"exact"},{"name":"ubiquinone biosynthesis monooxygenase COQ7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74826"}


id: GO:0070183
data:
  {"annotated_genes":["SJAG_04840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93360],"is_not":false,"summary":null,"term":"GO:0070183"}]},"cv_name":"biological_process","definition":"The process of coupling tryptophan to tryptophanyl-tRNA in a mitochondrion, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophanyl-tRNA aminoacylation","termid":"GO:0006436"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tryptophanyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070183","terms_by_termid":{"GO:0070183":null}}


id: FYPO:0004965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is inviable, is shaped in the form of a pear, and has a larger volume than normal, in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"inviable pear-shaped vegetative cell","termid":"FYPO:0002904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable swollen pear-shaped vegetative cell","synonyms":[{"name":"inviable enlarged pear-shaped vegetative cell","type":"related"},{"name":"inviable enlarged volume pear-shaped vegetative cell","type":"exact"},{"name":"inviable large pear-shaped vegetative cell","type":"related"},{"name":"inviable swollen ice cream cone-shaped vegetative cell","type":"exact"},{"name":"inviable swollen pear-shaped cell during vegetative growth","type":"exact"},{"name":"inviable swollen pear-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable, increased pear-shaped vegetative cell size","type":"related"},{"name":"inviable, increased pear-shaped vegetative cell volume","type":"exact"},{"name":"lethal; swollen pear-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0004965"}


id: PBO:0065819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5A, member RAS oncogene family","termid":"PBO:0065819"}


id: GO:0034743
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the tumor suppressor protein adenomatous polyposis coli (APC) and the Rac1 and Cdc42 effector IQGAP1; may play a role in cytoskeleton organization and cell migration.","definition_xrefs":["PMID:15572129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"APC-IQGAP complex","termid":"GO:0034743"}


id: PBO:0071329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 6","termid":"PBO:0071329"}


id: GO:0052453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the directed movement of substances within the cell or cells of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont intracellular transport (obsolete GO:0052453)","synonyms":[{"name":"modulation by organism of symbiont intracellular transport","type":"exact"},{"name":"modulation of symbiont intracellular trafficking","type":"exact"}],"termid":"GO:0052453"}


id: PBO:0041261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q A chain","termid":"PBO:0041261"}


id: PBO:0043623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol-O-methyltransferase","termid":"PBO:0043623"}


id: PBO:0078939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 6-2","termid":"PBO:0078939"}


id: PBO:0078285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 18-1","termid":"PBO:0078285"}


id: PBO:0087206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; methylates translational release factor Mrf1p; similar to E.coli PrmC; is not an essential gene","termid":"PBO:0087206"}


id: SO:0000495
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 12 or 23 nucleotide spacer between the 3'D-HEPTAMER and 3'D-NONAMER of a 3'D-RS.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"three_prime_D_recombination_signal_sequence","termid":"SO:0000570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_D_spacer","synonyms":[{"name":"3'D-SPACER","type":"exact"},{"name":"three prime D spacer","type":"exact"}],"termid":"SO:0000495"}


id: PR:O74368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maintenance of mitochondrial morphology protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.01c","synonyms":[{"name":"Spom972h-mmm1","type":"exact"}],"termid":"PR:O74368"}


id: FYPO:0004727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubules are formed from existing nuclear microtubules. Normally, cytoplasmic microtubules are nucleated from microtubule organizing centers in the cytoplasm.","definition_xrefs":["PomBase:mah","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"cytoplasmic microtubule formation from nuclear microtubules","synonyms":[{"name":"cytoplasmic microtubule formation from nuclear microtubules during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubule formation from nuclear microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004727"}


id: PBO:0063472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 2","termid":"PBO:0063472"}


id: GO:0097456
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of myelin-forming Schwann cell consisting of terminal cytoplasmic extensions adhered to the axon at the beginning and end of the myelin sheath.","definition_xrefs":["NIF_Subcellular:sao924713546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"terminal loop","synonyms":[{"name":"terminal loop of Schwann cell","type":"exact"}],"termid":"GO:0097456"}


id: MOD:01292
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00075. Map to MOD:00075.","definition_xrefs":["Unimod:529"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01292 dimethylation of proline residue (obsolete MOD:01292)","synonyms":[{"name":"Delta:H(5)C(2)","type":"related"},{"name":"Dimethylation of proline residue","type":"related"}],"termid":"MOD:01292"}


id: GO:0042960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of antimonite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimonite transmembrane transporter activity","termid":"GO:0015104"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"antimonite secondary active transmembrane transporter activity","synonyms":[{"name":"antimonite porter activity","type":"related"}],"termid":"GO:0042960"}


id: GO:0060886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of epithelial to mesenchymal transition that contributes to the shaping of the semicircular canal by effectively removing epithelial cells from the fusion plate, forming the loops of the canals.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"},{"relation_name":"is_a","term_name":"clearance of cells from fusion plate","termid":"GO:0060884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of cells from fusion plate by epithelial to mesenchymal transition","termid":"GO:0060886"}


id: GO:1990930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative demethylation of N1-methyladenosine RNA, with concomitant decarboxylation of 2-oxoglutarate and releases oxidized methyl group on N1-methyladenosine as formaldehyde.","definition_xrefs":["PMID:26863196","PMID:26863410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidative RNA demethylase activity","termid":"GO:0035515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491","GO:0140098"],"is_obsolete":false,"name":"mRNA N1-methyladenosine dioxygenase activity","secondary_identifiers":["RHEA:49516","EC:1.14.11.54"],"synonyms":[{"name":"RNA N(1)-methyladenosine dioxygenase activity","type":"related"},{"name":"RNA N1-methyladenosine dioxygenase activity","type":"related"}],"termid":"GO:1990930"}


id: PBO:0051209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-55 (pseudogene)","termid":"PBO:0051209"}


id: GO:1901490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["PMID:20133819","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphangiogenesis","synonyms":[{"name":"regulation of lymph vessel formation","type":"exact"}],"termid":"GO:1901490"}


id: GO:0062086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vein smooth muscle contraction.","definition_xrefs":["PMID:8428203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle contraction","termid":"GO:0003056"},{"relation_name":"regulates","term_name":"vein smooth muscle contraction","termid":"GO:0014826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vein smooth muscle contraction","termid":"GO:0062086"}


id: PBO:0082053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exonuclease specific for poly-A RNAs; has a domain similar to a magnesium-dependent endonuclease motif in mRNA deadenylase Ccr4p; similar to Ngl1p; NGL3 has a paralog, NGL2, that arose from the whole genome duplication","termid":"PBO:0082053"}


id: PBO:0031449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pre-replicative_complex_assembly","termid":"PBO:0031449"}


id: GO:1904722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mRNA endonucleolytic cleavage involved in unfolded protein response.","definition_xrefs":["GO_REF:0000058","PMID:20625543","GOC:bf","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mRNA endonucleolytic cleavage involved in unfolded protein response (obsolete GO:1904722)","synonyms":[{"name":"activation of HAC1 mRNA cleavage","type":"narrow"},{"name":"activation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"activation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"activation of XBP1 mRNA cleavage","type":"narrow"},{"name":"activation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"narrow"},{"name":"positive regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"positive regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"positive regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"positive regulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"up regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"up regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"up regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"up regulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"up regulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"up-regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"up-regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"up-regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"up-regulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"up-regulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"upregulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"upregulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"upregulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"upregulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"upregulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"}],"termid":"GO:1904722"}


id: GO:0051763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sesquiterpenes, any of a class of terpenes of the formula C15H24 or a derivative of such a terpene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"},{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"sesquiterpene catabolic process","termid":"GO:0051763"}


id: GO:0047859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,4-dihydroxy-L-phenylalanine = trans-caffeate + NH3.","definition_xrefs":["MetaCyc:DIHYDROXYPHENYLALANINE-AMMONIA-LYASE-RXN","EC:4.3.1.11"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroxyphenylalanine ammonia-lyase activity (obsolete GO:0047859)","synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine ammonia-lyase (trans-caffeate-forming)","type":"related"},{"name":"3,4-dihydroxy-L-phenylalanine ammonia-lyase activity","type":"related"},{"name":"beta-(3,4-dihydroxyphenyl)-L-alanine (DOPA) ammonia-lyase activity","type":"related"},{"name":"dihydroxyphenylalanine ammonia-lyase activity","type":"exact"}],"termid":"GO:0047859"}


id: GO:0009904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The relocation process in which chloroplasts in photosynthetic cells move toward a brighter area in a cell to optimize photosynthesis.","definition_xrefs":["GOC:tb","PMID:11978863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast relocation","termid":"GO:0009902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"chloroplast accumulation movement","synonyms":[{"name":"low-fluence-rate response","type":"related"}],"termid":"GO:0009904"}


id: PBO:0068752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 7, pseudogene","termid":"PBO:0068752"}


id: FYPO:0009027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing phenylalanine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth on phenylalanine nitrogen source","synonyms":[{"name":"increased growth on phenylalanine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on phenylalanine nitrogen source","type":"exact"}],"termid":"FYPO:0009027"}


id: PBO:0049360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 19","termid":"PBO:0049360"}


id: PBO:0029154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cumene_hydroperoxide","termid":"PBO:0029154"}


id: PBO:0085479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable Mg(2+) transporter; overexpression confers increased tolerance to Al(3+) and Ga(3+) ions; plays a role in regulating Ty1 transposition","termid":"PBO:0085479"}


id: FYPO:0004255
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus, is elongated, and is inviable.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"elongated mononucleate vegetative cell","termid":"FYPO:0001916"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable elongated mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable elongated mononucleate cell during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable long mononucleate vegetative cell","type":"exact"},{"name":"inviable vegetative elongated mononucleate cell","type":"exact"},{"name":"lethal; elongated mononucleate vegetative cell","type":"exact"}],"termid":"FYPO:0004255","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0080156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valosin containing protein","termid":"PBO:0080156"}


id: PR:O13928
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.08","synonyms":[{"name":"Spom972h-rho3","type":"exact"}],"termid":"PR:O13928"}


id: GO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a T cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors.","definition_xrefs":["GOC:add","ISBN:0781735149","GOC:pr","PMID:11911826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell mediated cytotoxicity","synonyms":[{"name":"T cell mediated apoptosis","type":"exact"},{"name":"T cell mediated cell death","type":"exact"},{"name":"T cell mediated cell killing","type":"exact"},{"name":"T cell mediated cytolysis","type":"related"},{"name":"T lymphocyte mediated cytotoxicity","type":"exact"},{"name":"T-cell mediated apoptosis","type":"exact"},{"name":"T-cell mediated cell death","type":"exact"},{"name":"T-cell mediated cell killing","type":"exact"},{"name":"T-cell mediated cytotoxicity","type":"exact"},{"name":"T-lymphocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001913"}


id: GO:0016886
data:
  {"annotated_genes":["SJAG_00956","SJAG_00198","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110054,88586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003910"},{"annotations":[88587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003909"},{"annotations":[86678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003972"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of two molecules, or two groups within a single molecule, via a phosphoric ester bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.5.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00956":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"ligase activity, forming phosphoric ester bonds","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016886","terms_by_termid":{"GO:0003909":null,"GO:0003910":null,"GO:0003972":null}}


id: GO:0047458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-acetyl-L-serine + pyrazole = 3-(pyrazol-1-yl)-L-alanine + acetate + H+.","definition_xrefs":["EC:2.5.1.51","RHEA:13117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-pyrazolylalanine synthase activity","secondary_identifiers":["MetaCyc:2.5.1.51-RXN","KEGG_REACTION:R03134"],"synonyms":[{"name":"3-O-acetyl-L-serine:pyrazole 1-(2-amino-2-carboxyethyl)transferase activity","type":"related"},{"name":"BPA-synthase activity","type":"related"},{"name":"O(3)-acetyl-L-serine acetate-lyase (adding pyrazole) activity","type":"related"},{"name":"O3-acetyl-L-serine acetate-lyase (adding pyrazole)","type":"related"},{"name":"O3-acetyl-L-serine:pyrazole 1-(2-amino-2-carboxyethyl)transferase activity","type":"related"},{"name":"beta-(1-pyrazolyl)alanine synthase activity","type":"related"},{"name":"beta-pyrazolealanine synthase activity","type":"related"},{"name":"beta-pyrazolylalanine synthase (acetylserine) activity","type":"exact"},{"name":"pyrazolealanine synthase activity","type":"related"},{"name":"pyrazolylalaninase activity","type":"related"}],"termid":"GO:0047458"}


id: GO:0034164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 9 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 9 signaling pathway","termid":"GO:0034163"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 9 signaling pathway","termid":"GO:0034162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 9 signaling pathway","synonyms":[{"name":"negative regulation of TLR9 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 9 signalling pathway","type":"exact"}],"termid":"GO:0034164"}


id: GO:0005849
data:
  {"annotated_genes":["SJAG_03226","SJAG_03594","SJAG_01599","SJAG_03853","SJAG_02037","SJAG_04587","SJAG_02720","SJAG_01412","SJAG_03624","SJAG_04022","SJAG_02865","SJAG_01175","SJAG_03233","SJAG_00527","SJAG_00961","SJAG_03126","SJAG_03500","SJAG_01791"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83671,93251,84421,86651,88960,95168,100812,100849,114390,96381,105948,107438,108102,89474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005847"},{"annotations":[105949,95169,89497,94208,95705,107716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005848"}]},"cv_name":"cellular_component","definition":"Any macromolecular complex involved in cleavage or polyadenylation of mRNA molecules.","definition_xrefs":["GOC:mah","PMID:10357856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04587":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mRNA cleavage factor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005849","terms_by_termid":{"GO:0005847":null,"GO:0005848":null}}


id: GO:0044577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of xylose, an aldopentose, into ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:tt","PMID:26927067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"},{"relation_name":"is_a","term_name":"D-xylose catabolic process","termid":"GO:0042843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"D-xylose catabolic process to ethanol","synonyms":[{"name":"D-xylose fermentation","type":"exact"},{"name":"xylose catabolism to ethanol","type":"exact"}],"termid":"GO:0044577"}


id: PBO:0085380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; multidrug transporter actively regulated by Pdr1p; also involved in steroid transport, cation resistance, and cellular detoxification during exponential growth; PDR5 has a paralog, PDR15, that arose from the whole genome duplication","termid":"PBO:0085380"}


id: PBO:0089577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex RNA helicase subunit Mtl1","termid":"PBO:0089577"}


id: GO:1902653
data:
  {"annotated_genes":["SJAG_00624","SJAG_02719","SJAG_03235","SJAG_00235","SJAG_03018","SJAG_03929","SJAG_03509","SJAG_02982","SJAG_03249","SJAG_03531","SJAG_04810","SJAG_01307","SJAG_00717","SJAG_04270","SJAG_02104","SJAG_03598","SJAG_04018","SJAG_03750","SJAG_00413","SJAG_03715","SJAG_01474","SJAG_00453","SJAG_02044","SJAG_00370","SJAG_03024","SJAG_04865","SJAG_04217","SJAG_02855","SJAG_04499","SJAG_00770"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103838,111395,90678,88620,100809,84767,88567,84510,103657,84731,94111,100572,102638,114949,94926,103972,107956,107449,111059,112717,106221,100383,85691,92653,87514,105374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[89921],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[105984],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[105985],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[84599,84598,101955],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of secondary alcohol.","definition_xrefs":["PMID:11288200","GOC:mengo_curators","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"secondary alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"secondary alcohol anabolism","type":"exact"},{"name":"secondary alcohol biosynthesis","type":"exact"},{"name":"secondary alcohol formation","type":"exact"},{"name":"secondary alcohol synthesis","type":"exact"}],"termid":"GO:1902653","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PBO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two-component GAP Cdc16","termid":"PBO:0001708"}


id: PBO:0045428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatopontin","termid":"PBO:0045428"}


id: PR:Q10094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.15","synonyms":[{"name":"Spom972h-SPAC11D3.15","type":"exact"}],"termid":"PR:Q10094"}


id: GO:0140412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: zinc(out) + HCO3-(out) = zinc(in) + HCO3-(in).","definition_xrefs":["PMID:27166256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"monoatomic cation:bicarbonate symporter activity","termid":"GO:0140410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"zinc:bicarbonate symporter activity","synonyms":[{"name":"zinc:hydrogencarbonate symporter activity","type":"exact"}],"termid":"GO:0140412"}


id: GO:0170047
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein coat that surrounds nucleic acid to form a structure similar to a virus capsid. Virus-like capsids are non-infectious and are encoded by endogenous (non-viral) genes. Fly and tetrapod Arc (ancestrally-related to retrotransposon Gag) are examples of proteins that can self-assemble into capsid-like structures which encapsulate Arc mRNA and mediate the intercellular transmission of RNA.","definition_xrefs":["PMID:29328916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus-like capsid","synonyms":[{"name":"virus-like particle","type":"narrow"}],"termid":"GO:0170047"}


id: GO:1901904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tyrocidine.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00180","PMID:9352938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"tyrocidine metabolic process","termid":"GO:1901902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tyrocidine biosynthetic process","synonyms":[{"name":"tyrocidine anabolism","type":"exact"},{"name":"tyrocidine biosynthesis","type":"exact"},{"name":"tyrocidine formation","type":"exact"},{"name":"tyrocidine synthesis","type":"exact"}],"termid":"GO:1901904"}


id: PBO:0076507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 7","termid":"PBO:0076507"}


id: PBO:0054116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1482","termid":"PBO:0054116"}


id: PBO:0060188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 6, oligomeric mucus/gel-forming","termid":"PBO:0060188"}


id: PR:Q9UTK1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox16 gene.","definition_xrefs":["UniProtKB:Q9UTK1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein cox16, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.08","synonyms":[{"name":"Spom972h-cox16","type":"exact"}],"termid":"PR:Q9UTK1"}


id: PBO:0072526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 55","termid":"PBO:0072526"}


id: PBO:0003544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT II complex subunit Dot2","termid":"PBO:0003544"}


id: FYPO:0006701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of UMP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular UMP level","synonyms":[{"name":"decreased cellular UMP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular UMP level during vegetative growth","type":"exact"},{"name":"reduced cellular UMP level","type":"exact"}],"termid":"FYPO:0006701"}


id: PBO:0083049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deubiquitinating enzyme anchored to the outer mitochondrial membrane; probably not important for general mitochondrial functioning, but may perform a more specialized function at mitochondria","termid":"PBO:0083049"}


id: GO:0097007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (EE)-geranyllinalool + NADPH + O2 = 4,8,12-trimethyl-1,3,7,11-tridecatetraene + NADP+ + 2 H2O. It is unknown whether this reaction proceeds by the direct release of the 4-carbon compound but-1-en-3-one, or whether the substrate is first degraded to C18-farnesylacetone and then cleaved to produce 4,8,12-trimethyl-1,3,7,11-tridecatetraene (TMTT) and acetone.","definition_xrefs":["GOC:kad","PMID:21088219","MetaCyc:RXN-8620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity","secondary_identifiers":["RHEA:13545"],"synonyms":[{"name":"4,8,12-trimethyl-1,3,7,11-tridecatetraene synthase activity","type":"exact"},{"name":"TMTT synthase activity","type":"exact"}],"termid":"GO:0097007"}


id: GO:0141165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a glucosinolate across a membrane.","definition_xrefs":["PMID:37076627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glucosinolate transmembrane transporter activity","termid":"GO:0141165"}


