# terms

id: PR:O94621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp109 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein usp109 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.12","synonyms":[{"name":"Spom972h-usp109","type":"exact"}],"termid":"PR:O94621"}


id: PBO:0061165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Leu (TAA) 3-1","termid":"PBO:0061165"}


id: PBO:0048649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein gamma 2","termid":"PBO:0048649"}


id: GO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a glucocorticoid receptor into the nucleus.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete glucocorticoid receptor import into nucleus (obsolete GO:0002147)","synonyms":[{"name":"glucocorticoid receptor nuclear translocation","type":"narrow"}],"termid":"GO:0002147"}


id: GO:0085010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a secreted substance from the symbiont entering host cells via endocytosis of the substance. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by secreted substance entering host via endocytosis (obsolete GO:0085010)","termid":"GO:0085010"}


id: PBO:0012243
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains FLEX elelment","termid":"PBO:0012243"}


id: PBO:0041436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 40","termid":"PBO:0041436"}


id: GO:0048240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium.","definition_xrefs":["GOC:jid","ISBN:978-3-642-58301-8","PMID:11820818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm capacitation","synonyms":[{"name":"sperm activation","type":"related"}],"termid":"GO:0048240"}


id: PBO:0089191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted GTPase with a role in RNA polymerase localization","termid":"PBO:0089191"}


id: PBO:0048040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSIP2 antisense RNA 1","termid":"PBO:0048040"}


id: PBO:0005102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid oxidoreductase superfamily protein (predicted)","termid":"PBO:0005102"}


id: PBO:0069650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 927, pseudogene","termid":"PBO:0069650"}


id: GO:0140651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation and dephosphorylation of creatine in a futile cycle, which dissipates the high energy charge of phosphocreatine as heat without performing any mechanical or chemical work. The futile creatine cycle takes place in thermogenic fat cells and is part of adaptive thermogenesis.","definition_xrefs":["PMID:33981039","PMID:33597756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"},{"relation_name":"part_of","term_name":"adaptive thermogenesis","termid":"GO:1990845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"futile creatine cycle","termid":"GO:0140651"}


id: PBO:0041678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CADM3 antisense RNA 1","termid":"PBO:0041678"}


id: PBO:0003776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr2","termid":"PBO:0003776"}


id: GO:0044582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA to form butanol.","definition_xrefs":["GOC:mengo_curators","PMID:19539744","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyryl-CoA catabolic process","termid":"GO:0044580"},{"relation_name":"is_a","term_name":"1-butanol biosynthetic process","termid":"GO:0071271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0044248","GO:0055086","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"butyryl-CoA catabolic process to butanol","synonyms":[{"name":"butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:0044582"}


id: GO:0004366
data:
  {"annotated_genes":["SJAG_03305","SJAG_02654"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69330,100995],"is_not":false,"summary":null,"term":"GO:0004366"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-CoA + sn-glycerol 3-phosphate = a 1-acyl-sn-glycero-3-phosphate + CoA.","definition_xrefs":["RHEA:15325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02654":null,"SJAG_03305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-75886","EC:2.3.1.15","MetaCyc:RXN-1381","Reactome:R-HSA-549112","Reactome:R-HSA-1482695"],"synonyms":[{"name":"3-glycerophosphate acyltransferase activity","type":"related"},{"name":"ACP:sn-glycerol-3-phosphate acyltransferase activity","type":"related"},{"name":"acyl-CoA:sn-glycerol-3-phosphate 1-O-acyltransferase activity","type":"related"},{"name":"alpha-glycerophosphate acyltransferase activity","type":"related"},{"name":"glycerol 3-phosphate acyltransferase activity","type":"related"},{"name":"glycerol phosphate acyltransferase activity","type":"related"},{"name":"glycerol phosphate transacylase activity","type":"related"},{"name":"glycerophosphate acyltransferase activity","type":"related"},{"name":"glycerophosphate transacylase activity","type":"related"},{"name":"sn-glycerol 3-phosphate acyltransferase activity","type":"related"},{"name":"sn-glycerol-3-phosphate acyltransferase activity","type":"related"}],"termid":"GO:0004366","terms_by_termid":{"GO:0004366":null}}


id: PBO:0040896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 2","termid":"PBO:0040896"}


id: GO:0004126
data:
  {"annotated_genes":["SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85229],"is_not":false,"summary":null,"term":"GO:0004126"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: cytidine + H+ + H2O = uridine + NH4 and deoxycytidine + H+ + H2O = deoxyuridine + NH4+.","definition_xrefs":["EC:3.5.4.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"cytidine deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73608","Reactome:R-HSA-83677","Reactome:R-HSA-9817513"],"synonyms":[{"name":"(deoxy)cytidine deaminase activity","type":"exact"},{"name":"cytidine aminohydrolase activity","type":"related"},{"name":"cytosine nucleoside deaminase activity","type":"related"},{"name":"deoxycytidine deaminase activity","type":"related"}],"termid":"GO:0004126","terms_by_termid":{"GO:0004126":null}}


id: GO:0003236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sinus venosus is generated and organized. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"sinus venosus development","termid":"GO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinus venosus morphogenesis","termid":"GO:0003236"}


id: PBO:0108959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_deletion_and_mutation","termid":"PBO:0108959"}


id: PBO:0109391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 20","termid":"PBO:0109391"}


id: PBO:0091902
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription unchanged","termid":"PBO:0091902"}


id: PBO:0061923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily F member 12, pseudogene","termid":"PBO:0061923"}


id: GO:0008154
data:
  {"annotated_genes":["SJAG_03025","SJAG_03380","SJAG_02700","SJAG_01993","SJAG_04982","SJAG_00521","SJAG_00677","SJAG_03086","SJAG_02245","SJAG_01894","SJAG_04100","SJAG_00279","SJAG_02566","SJAG_01268","SJAG_04479"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97006,88561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[88346,64150,89863,93790,94912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[88347,94973,110477,84292],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[97835,86707,101280,85859,98841],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[93793,110480],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_01268":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03380":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0008154","terms_by_termid":{"GO:0030041":null,"GO:0030042":null,"GO:0030833":null,"GO:0042989":null,"GO:0051016":null}}


id: PBO:0059940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 26","termid":"PBO:0059940"}


id: GO:0035613
data:
  {"annotated_genes":["SJAG_04527","SJAG_04880"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98273,106071],"is_not":false,"summary":null,"term":"GO:0035613"}]},"cv_name":"molecular_function","definition":"Binding to a stem-loop in an RNA molecule. An RNA stem-loop is a secondary RNA structure consisting of a double-stranded RNA (dsRNA) stem and a terminal loop.","definition_xrefs":["PMID:20455544","PMID:16568238","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04527":null,"SJAG_04880":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA stem-loop binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA hairpin binding","type":"exact"},{"name":"RNA hairpin loop binding","type":"exact"}],"termid":"GO:0035613","terms_by_termid":{"GO:0035613":null}}


id: GO:0031538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways involving anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of anthocyanin metabolic process","termid":"GO:0031537"},{"relation_name":"negatively_regulates","term_name":"anthocyanin-containing compound metabolic process","termid":"GO:0046283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anthocyanin metabolic process","synonyms":[{"name":"down regulation of anthocyanin metabolic process","type":"exact"},{"name":"down-regulation of anthocyanin metabolic process","type":"exact"},{"name":"downregulation of anthocyanin metabolic process","type":"exact"},{"name":"inhibition of anthocyanin metabolic process","type":"narrow"},{"name":"negative regulation of anthocyanin metabolism","type":"exact"}],"termid":"GO:0031538"}


id: PBO:0064448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocan like 1","termid":"PBO:0064448"}


id: PBO:0057442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 559","termid":"PBO:0057442"}


id: GO:0160114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure which joins the B1 protofilament of the B tubule to the A10 and A11 protofilaments of the A tubule within an axonemal microtubule doublet.","definition_xrefs":["PMID:29430673","PMID:37295417","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal microtubule doublet outer junction","termid":"GO:0160114"}


id: GO:0018938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-nitropropane, a clear, colorless liquid with a mild, fruity odor. 2-nitropropane is used principally as a solvent and chemical intermediate. As a solvent, it is used in inks, paints, adhesives, varnishes, polymers, and synthetic materials. It is a feedstock for the manufacture of 2-nitro-2-methyl-1-propanol and 2-amino-2-methyl-1-propanol.","definition_xrefs":["UM-BBD_pathwayID:npp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-nitropropane metabolic process","secondary_identifiers":["MetaCyc:PWY-723"],"synonyms":[{"name":"2-nitropropane metabolism","type":"exact"}],"termid":"GO:0018938"}


id: PR:O94565
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh4 gene.","definition_xrefs":["UniProtKB:O94565","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.08c","synonyms":[{"name":"Spom972h-omh4","type":"exact"}],"termid":"PR:O94565"}


id: PBO:0087261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase of the the RAM signaling network; Ndr/LATS family member; binds regulatory subunit Mob2p; involved in regulation of cellular morphogenesis, polarized growth, and septum destruction; phosphorylation by Cbk1p regulates localization and activity of Ace2p transcription factor and Ssd1p translational repressor; Cbk1p activity is regulated by both phosphorylation and specific localization; relocalizes to cytoplasm upon DNA replication stress","termid":"PBO:0087261"}


id: PBO:0058529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6074","termid":"PBO:0058529"}


id: PBO:0028238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_protein","termid":"PBO:0028238"}


id: PBO:0060199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC20 overlapping transcript","termid":"PBO:0060199"}


id: GO:0030956
data:
  {"annotated_genes":["SJAG_01577","SJAG_05560","SJAG_02721"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92720,107429,114566],"is_not":false,"summary":null,"term":"GO:0030956"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses glutamyl-tRNA(Gln) amidotransferase activity, and therefore creates Gln-tRNA by amidating Glu-tRNA; usually composed of 3 subunits: A, B, and C. Note that the C subunit may not be required in all organisms.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01577":null,"SJAG_02721":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutamyl-tRNA(Gln) amidotransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AdT","type":"related"},{"name":"GatCAB","type":"narrow"},{"name":"GatFAB","type":"narrow"}],"termid":"GO:0030956","terms_by_termid":{"GO:0030956":null}}


id: PR:Q9UTM3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10855:SF1","OMA:SCHPO02037","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn5 (Schizosaccharomyces pombe 972h-)","secondary_identifiers":["UniProtKB:Q9UTM3"],"synonyms":[{"name":"Spom972h-PSMD12","type":"exact"}],"termid":"PR:Q9UTM3"}


id: PBO:0078834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (GGG) 1-1","termid":"PBO:0078834"}


id: GO:0048479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the style over time, from its formation to the mature structure. The style is an elongated part of a carpel, or group of fused carpels, and it lies between the ovary and the stigma.","definition_xrefs":["PO:0009074","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"carpel development","termid":"GO:0048440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"style development","termid":"GO:0048479"}


id: PBO:0083522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF PEX14/YGL153W","termid":"PBO:0083522"}


id: PBO:0075306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOCS3 divergent transcript","termid":"PBO:0075306"}


id: PBO:0090047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex PHD finger subunit Cti6","termid":"PBO:0090047"}


id: PBO:0001417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calchone related protein family","termid":"PBO:0001417"}


id: PBO:0077336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM72 antisense RNA 1","termid":"PBO:0077336"}


id: GO:0030334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell migration.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell motility","termid":"GO:2000145"},{"relation_name":"regulates","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell migration","termid":"GO:0030334"}


id: PBO:0083821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); complex couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; also localized to nuclear side of spindle pole body","termid":"PBO:0083821"}


id: GO:0046786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of organizing and assembling viral replication proteins in preparation for viral replication.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral replication complex formation and maintenance","termid":"GO:0046786"}


id: PBO:0061008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"niban apoptosis regulator 1","termid":"PBO:0061008"}


id: PBO:0090320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase","termid":"PBO:0090320"}


id: FYPO:0002593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation occurs to a lower extent than normal. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone phosphorylation during vegetative growth","synonyms":[{"name":"decreased histone phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced histone phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002593"}


id: MOD:00754
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a bromine atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brominated residue","synonyms":[{"name":"BrRes","type":"exact"}],"termid":"MOD:00754"}


id: FYPO:0004346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at non-coding RNA genes is decreased.","definition_xrefs":["PMID:25002536","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin at ncRNA genes","synonyms":[{"name":"decreased protein localisation to chromatin at ncRNA genes","type":"exact"},{"name":"decreased protein localization to chromatin at ncRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at ncRNA genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at non-coding RNA genes","type":"exact"},{"name":"reduced protein localization to chromatin at ncRNA genes","type":"exact"}],"termid":"FYPO:0004346"}


id: PBO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme (predicted)","termid":"PBO:0002287"}


id: PBO:0070072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 29, pseudogene","termid":"PBO:0070072"}


id: PBO:0057364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ag-2","termid":"PBO:0057364"}


id: GO:0047428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + 4-chlorophenylacetonitrile = 4-chlorophenylacetate + NH3.","definition_xrefs":["EC:3.5.5.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"arylacetonitrilase activity","secondary_identifiers":["RHEA:20657","MetaCyc:3.5.5.5-RXN"],"synonyms":[{"name":"arylacetonitrile aminohydrolase activity","type":"related"}],"termid":"GO:0047428"}


id: GO:2000893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellotriose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellotriose metabolic process","synonyms":[{"name":"cellotriose metabolism","type":"exact"}],"termid":"GO:2000893"}


id: GO:0052645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving F420-0 (5-O-{[(1S)-1-carboxyethoxy](hydroxy)phosphoryl}-1-deoxy-1-(8-hydroxy-2,4-dioxo-2H-pyrimido[4,5-b]quinolin-10(4H)-yl)-D-ribitol), the fragment of coenzyme F420 remaining after formal hydrolytic removal of all of the glutamate residues.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"},{"relation_name":"is_a","term_name":"ribitol phosphate metabolic process","termid":"GO:0052648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"F420-0 metabolic process","synonyms":[{"name":"F(420)-0 metabolic process","type":"exact"},{"name":"F420-0 metabolism","type":"exact"},{"name":"coenzyme F420-0 metabolic process","type":"exact"},{"name":"coenzyme F420-0 metabolism","type":"exact"}],"termid":"GO:0052645"}


id: PBO:0055970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRR binding FLII interacting protein 2","termid":"PBO:0055970"}


id: PBO:0070224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 157 pseudogene","termid":"PBO:0070224"}


id: GO:0099543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a soluble gas ligand crossing the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}


id: PBO:0046802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VIII","termid":"PBO:0046802"}


id: PBO:0064687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 23","termid":"PBO:0064687"}


id: PBO:0027210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-large_vacuoles_present_in_decreased_numbers_during_salt_stress","termid":"PBO:0027210"}


id: PBO:0083512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF ERG7/YHR072W","termid":"PBO:0083512"}


id: PBO:0040041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor nuclear translocator","termid":"PBO:0040041"}


id: GO:0016408
data:
  {"annotated_genes":["SJAG_04107","SJAG_04178","SJAG_02305","SJAG_04972","SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"},{"annotations":[93758,96832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004321"},{"annotations":[101660,88810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_02305":null,"SJAG_04107":null,"SJAG_04178":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"C-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016408","terms_by_termid":{"GO:0003985":null,"GO:0004321":null,"GO:0004758":null}}


id: FYPO:0004428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic cytokinesis is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"increased rate of cytokinesis","synonyms":[{"name":"increased rate of cytokinesis during mitotic cell cycle","type":"related"},{"name":"increased rate of cytokinesis during vegetative growth","type":"exact"},{"name":"increased rate of mitotic cytokinesis","type":"exact"}],"termid":"FYPO:0004428"}


id: GO:0031434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitogen-activated protein kinase kinase, a protein that can phosphorylate a MAP kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"mitogen-activated protein kinase kinase binding","synonyms":[{"name":"MAPKK binding","type":"exact"}],"termid":"GO:0031434"}


id: PBO:0047386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 24","termid":"PBO:0047386"}


id: PBO:0055311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2739","termid":"PBO:0055311"}


id: PBO:0004569
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative initiation site","termid":"PBO:0004569"}


id: GO:0046311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prenylcysteine, 3-methyl-2-buten-1-yl-cysteine, a derivative of the amino acid cysteine formed by the covalent addition of a prenyl residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenylcysteine metabolic process","termid":"GO:0030329"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylcysteine biosynthetic process","synonyms":[{"name":"prenylcysteine anabolism","type":"exact"},{"name":"prenylcysteine biosynthesis","type":"exact"},{"name":"prenylcysteine formation","type":"exact"},{"name":"prenylcysteine synthesis","type":"exact"}],"termid":"GO:0046311"}


id: PBO:0027315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasmic_stress_granule","termid":"PBO:0027315"}


id: FYECO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cisplatin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cisplatin","termid":"FYECO:0000091"}


id: PBO:0051451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-39","termid":"PBO:0051451"}


id: PBO:0043670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10B pseudogene 2","termid":"PBO:0043670"}


id: PBO:0047257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 241 member B","termid":"PBO:0047257"}


id: GO:0044453
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the nuclear membrane, the envelope that surrounds the nucleus of eukaryotic cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear membrane part (obsolete GO:0044453)","termid":"GO:0044453"}


id: GO:0031441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mRNA 3'-end processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA 3'-end processing","termid":"GO:0031440"},{"relation_name":"is_a","term_name":"negative regulation of mRNA processing","termid":"GO:0050686"},{"relation_name":"negatively_regulates","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA 3'-end processing","synonyms":[{"name":"down regulation of mRNA 3'-end processing","type":"exact"},{"name":"down-regulation of mRNA 3'-end processing","type":"exact"},{"name":"downregulation of mRNA 3'-end processing","type":"exact"},{"name":"inhibition of mRNA 3'-end processing","type":"narrow"}],"termid":"GO:0031441"}


id: GO:0051520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops the active process of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of bipolar cell growth","termid":"GO:0051517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"termination of bipolar cell growth","termid":"GO:0051520"}


id: GO:0010646
data:
  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id: GO:0050922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a motile cell or organism in response to a specific chemical concentration gradient.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"negative regulation of locomotion","termid":"GO:0040013"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"negatively_regulates","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemotaxis","synonyms":[{"name":"down regulation of chemotaxis","type":"exact"},{"name":"down-regulation of chemotaxis","type":"exact"},{"name":"downregulation of chemotaxis","type":"exact"},{"name":"inhibition of chemotaxis","type":"narrow"}],"termid":"GO:0050922"}


id: GO:0010136
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ureide, which is the organic form of nitrogen in nitrogen fixing and transporting plants with the release of ammonium.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"ureide metabolic process","termid":"GO:0010135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureide catabolic process","secondary_identifiers":["MetaCyc:URDEGR-PWY"],"synonyms":[{"name":"ureide breakdown","type":"exact"},{"name":"ureide catabolism","type":"exact"},{"name":"ureide degradation","type":"exact"}],"termid":"GO:0010136"}


id: SO:0000263
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has an isoleucine anticodon, and a 3' isoleucine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"isoleucine_tRNA_primary_transcript","termid":"SO:0000220"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucyl_tRNA","synonyms":[{"name":"isoleucyl tRNA","type":"exact"},{"name":"isoleucyl-transfer RNA","type":"exact"},{"name":"isoleucyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000263"}


id: PBO:0041377
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 54","termid":"PBO:0041377"}


id: GO:0098672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the CRISPR-cas system of its host. Bacteria and archaea use CRISPR-Cas adaptive immune systems to defend themselves from infection by bacteriophages (phages), and phages have various mechanisms to counter the CRISPR-cas system.","definition_xrefs":["PMID:23446421","PMID:28749735","PMID:23242138","PMID:26416740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host CRISPR-cas system","secondary_identifiers":["VZ:3962"],"synonyms":[{"name":"CRISPR-cas system evasion by virus","type":"exact"},{"name":"anti-CRISPR","type":"broad"},{"name":"evasion by virus of CRISPR-cas system","type":"related"},{"name":"inhibition of host CRISPR-cas system by virus","type":"related"},{"name":"suppression of host CRISPR-cas system","type":"exact"}],"termid":"GO:0098672"}


id: GO:1905069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an allantois over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","GOC:TermGenie","PMID:17440924","PMID:21470579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraembryonic membrane development","termid":"GO:1903867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantois development","synonyms":[{"name":"allantoic bud development","type":"related"}],"termid":"GO:1905069"}


id: FYPO:0005027
data:
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id: PBO:0004104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box variant","termid":"PBO:0004104"}


id: PBO:0059937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 23","termid":"PBO:0059937"}


id: PR:P33520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- res1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P33520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle-related protein res1/sct1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.16","synonyms":[{"name":"Spom972h-res1","type":"exact"},{"name":"p72sct1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P33520"}


id: PBO:0003944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centaurin 5","termid":"PBO:0003944"}


id: PBO:0109278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3113","termid":"PBO:0109278"}


id: PBO:0082022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 family member B, cell cycle regulator","termid":"PBO:0082022"}


id: GO:0050644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-4-coumarate + UDP-D-glucose = 4'-O-beta-D-glucosyl-cis-4-coumarate + H+ + UDP.","definition_xrefs":["RHEA:13129","EC:2.4.1.209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cis-p-coumarate glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05324","MetaCyc:2.4.1.209-RXN"],"synonyms":[{"name":"UDP-glucose:cis-p-coumarate beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0050644"}


id: FYPO:0006315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation does not occur. Homologous chromosome segregation is the process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle.","definition_xrefs":["GO:0045143","PMID:29259000","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished homologous chromosome segregation","synonyms":[{"name":"abolished chromosome segregation during meiosis I","type":"exact"},{"name":"homologous chromosome segregation abolished","type":"exact"}],"termid":"FYPO:0006315"}


id: PBO:0000761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triacylglycerol lipase (predicted)","termid":"PBO:0000761"}


id: PBO:0057279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 500b","termid":"PBO:0057279"}


id: PBO:0044696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 1","termid":"PBO:0044696"}


id: PBO:0053172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left-right determination factor 3, pseudogene","termid":"PBO:0053172"}


id: GO:0014885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an injury stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of wounding","termid":"GO:0014822"},{"relation_name":"is_a","term_name":"response to injury involved in regulation of muscle adaptation","termid":"GO:0014876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of injury involved in regulation of muscle adaptation","synonyms":[{"name":"detection of injury involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014885"}


id: PBO:0091187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 6","termid":"PBO:0091187"}


id: PR:P33886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light chain kinase 2, skeletal/cardiac muscle that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase wis1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.07c","secondary_identifiers":["UniProtKB:P33886"],"synonyms":[{"name":"SPBC409.07c","type":"related"},{"name":"Spom972h-MYLK2","type":"exact"},{"name":"protein kinase sty2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"spc2","type":"related"},{"name":"sty2","type":"related"}],"termid":"PR:P33886"}


id: PBO:0031425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phenotype","termid":"PBO:0031425"}


id: PBO:0005722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc34 (predicted)","termid":"PBO:0005722"}


id: GO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a basophil or group of basophils.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0023052","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"histamine secretion by basophil","termid":"GO:0002557"}


id: PBO:0077009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombomodulin","termid":"PBO:0077009"}


id: PBO:0058509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5699","termid":"PBO:0058509"}


id: SO:1000039
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tandem duplication where the individual regions are in the same orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_duplication","termid":"SO:1000173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direct_tandem_duplication","synonyms":[{"name":"direct tandem duplication","type":"exact"}],"termid":"SO:1000039"}


id: PBO:0075007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-18","termid":"PBO:0075007"}


id: GO:0009342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses glutamate synthase (NADPH) activity.","definition_xrefs":["PMID:4565085","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase complex","termid":"GO:0031026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glutamate synthase complex (NADPH)","termid":"GO:0009342"}


id: PBO:0041059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 9 pseudogene 1","termid":"PBO:0041059"}


id: GO:0006406
data:
  {"annotated_genes":["SJAG_04536","SJAG_04202","SJAG_04480","SJAG_00178","SJAG_04721","SJAG_01652","SJAG_03300","SJAG_00992","SJAG_01584","SJAG_03693","SJAG_01374","SJAG_04379","SJAG_00471","SJAG_00641","SJAG_02209","SJAG_04472","SJAG_03283","SJAG_00298","SJAG_01065","SJAG_00093","SJAG_01715","SJAG_02704","SJAG_03986","SJAG_04347","SJAG_04645","SJAG_01185","SJAG_04115","SJAG_03002","SJAG_04310","SJAG_03847","SJAG_04148","SJAG_02534","SJAG_04017","SJAG_01083","SJAG_04656","SJAG_05328","SJAG_01449","SJAG_01529","SJAG_00375","SJAG_04589"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85032,85515,86639,93166,97236,99103,100057,101500,111050,111675,113436,113566],"is_not":false,"summary":null,"term":"GO:0006406"},{"annotations":[112590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[92596,106565,98847,109401,110613,98051,107261,112224,107898,115103,98750,112592,86976,111676,88215,68957,111967,100058,101862,112485,97950,104824,112739,111148,97475,103763,105992,93015,102279,114195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of mRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"is_a","term_name":"mRNA transport","termid":"GO:0051028"},{"relation_name":"part_of","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03283":null,"SJAG_03300":null,"SJAG_03693":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0010467","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mRNA export from nucleus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mRNA export from cell nucleus","type":"exact"},{"name":"mRNA export out of nucleus","type":"exact"},{"name":"mRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"mRNA-nucleus export","type":"exact"}],"termid":"GO:0006406","terms_by_termid":{"GO:0006406":null,"GO:0016973":null,"GO:0031990":null}}


id: PBO:0055222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2648","termid":"PBO:0055222"}


id: GO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between RNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-5'-RNA)-L-tyrosine.","definition_xrefs":["RESID:AA0249"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA-protein covalent cross-linking via peptidyl-tyrosine (obsolete GO:0018148)","termid":"GO:0018148"}


id: GO:0030562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of 2'-O-ribose methylation in an rRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification guide activity","termid":"GO:0030556"},{"relation_name":"is_a","term_name":"RNA 2'-O-ribose methylation guide activity","termid":"GO:0030561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"rRNA 2'-O-ribose methylation guide activity","termid":"GO:0030562"}


id: PBO:0076157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 pseudogene 1","termid":"PBO:0076157"}


id: PBO:0059315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L54","termid":"PBO:0059315"}


id: GO:0007054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the spindle during meiosis I of a meiotic cell cycle in males. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in male meiosis","termid":"GO:0007053"},{"relation_name":"part_of","term_name":"male meiosis I","termid":"GO:0007141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0000226","GO:0007010","GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"spindle assembly involved in male meiosis I","synonyms":[{"name":"male meiosis I spindle assembly","type":"related"}],"termid":"GO:0007054"}


id: PBO:0016892
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AUreobasidin A Resistance","termid":"PBO:0016892"}


id: PBO:0067885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 187","termid":"PBO:0067885"}


id: PBO:0082067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-adenine DNA glycosylase; initiates base excision repair (BER) by removing damaged bases to create abasic sites that are subsequently repaired; expansion of BER repair removes alkylated bases resulting from alkylating agent-induced DNA damage, compensating for the lack of DNA repair by oxidative dealkylation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082067"}


id: PBO:0068724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 13, pseudogene","termid":"PBO:0068724"}


id: PBO:0046965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member C","termid":"PBO:0046965"}


id: GO:0031316
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a nuclear outer membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"nuclear outer membrane","termid":"GO:0005640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of nuclear outer membrane","synonyms":[{"name":"extrinsic to nuclear outer membrane","type":"narrow"}],"termid":"GO:0031316"}


id: GO:0034378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-covalent aggregation and arrangement of proteins and lipids in the intestine to form a chylomicron.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle assembly","termid":"GO:0034377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"chylomicron assembly","termid":"GO:0034378"}


id: GO:0141154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the host shutoff of host translation, a host response that prevents mRNA in the cell to be translated, to prevent the symbiont from expressing its genes. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host translation","termid":"GO:0019057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host-directed shutoff of host translation","termid":"GO:0141154"}


id: PR:O13652
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sfi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.05c","synonyms":[{"name":"Spom972h-sfi1","type":"exact"},{"name":"suppressor of fermentation induced loss of stress resistance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13652"}


id: FYPO:0004650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule in the mitotic spindle, occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule depolymerization during vegetative growth","termid":"FYPO:0005682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule depolymerization","synonyms":[{"name":"decreased mitotic spindle microtubule catastrophe","type":"related"},{"name":"decreased mitotic spindle microtubule depolymerisation","type":"exact"},{"name":"decreased mitotic spindle microtubule depolymerization during vegetative growth","type":"exact"},{"name":"decreased mitotic spindle microtubule shrinkage","type":"related"},{"name":"decreased spindle microtubule depolymerization during mitotic cell cycle","type":"exact"},{"name":"reduced mitotic spindle microtubule depolymerization","type":"exact"}],"termid":"FYPO:0004650"}


id: PBO:0048548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor independent 1B transcriptional repressor","termid":"PBO:0048548"}


id: GO:0052436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the symbiont calcium-dependent protein kinase signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont calcium-dependent protein kinase pathway (obsolete GO:0052436)","synonyms":[{"name":"modulation by organism of defense-related symbiont CDPK pathway","type":"exact"},{"name":"modulation by organism of defense-related symbiont calcium-dependent protein kinase pathway","type":"exact"}],"termid":"GO:0052436"}


id: PBO:0061539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP2/Sun RNA methyltransferase 4","termid":"PBO:0061539"}


id: GO:0102387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-phenylethanol + acetyl-CoA = phenethyl acetate + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-phenylethanol acetyltransferase activity (obsolete GO:0102387)","termid":"GO:0102387"}


id: PBO:0051420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-23","termid":"PBO:0051420"}


id: GO:2001176
data:
  {"annotated_genes":["SJAG_03421","SJAG_00973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101808,84252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001178"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mediator complex assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"mediator complex assembly","termid":"GO:0036034"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00973":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of mediator complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2001176","terms_by_termid":{"GO:2001178":null}}


id: PBO:0072493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 22","termid":"PBO:0072493"}


id: PBO:0041259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 226","termid":"PBO:0041259"}


id: PBO:0030714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glucosyltransferase_activity","termid":"PBO:0030714"}


id: GO:0043471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of carbohydrates, carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular carbohydrate catabolic process (obsolete GO:0043471)","termid":"GO:0043471"}


id: PBO:0052276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM5C intronic transcript 1","termid":"PBO:0052276"}


id: PBO:0050532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxyphenylpyruvate dioxygenase like","termid":"PBO:0050532"}


id: PBO:0110259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb2","termid":"PBO:0110259"}


id: GO:0042598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular fraction (obsolete GO:0042598)","synonyms":[{"name":"vesicular fraction","type":"exact"}],"termid":"GO:0042598"}


id: PBO:0027797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tetraplatin","termid":"PBO:0027797"}


id: PBO:0046322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1 pseudogene 3","termid":"PBO:0046322"}


id: PBO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Azr1","termid":"PBO:0002222"}


id: PBO:0050580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 4","termid":"PBO:0050580"}


id: PBO:0087462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a kinetochore-microtubule binding complex; complex bridges centromeric heterochromatin and kinetochore MAPs and motors; required for sister chromatid bi-orientation and kinetochore binding of SAC components; complex also includes Kre28p; modified by sumoylation","termid":"PBO:0087462"}


id: PBO:0051457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-43","termid":"PBO:0051457"}


id: PBO:0059642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 8","termid":"PBO:0059642"}


id: PATO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the relative change in the bearer's length or the bearer's volume when being stretched or squashed.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strain","termid":"PATO:0001034"}


id: GO:0044069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont organism modulates the anion transport, the directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, of its host organism.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"monoatomic anion transport","termid":"GO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"modulation by symbiont of host anion transport","synonyms":[{"name":"modification of host anion transport by symbiont","type":"exact"}],"termid":"GO:0044069"}


id: GO:0030612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arsenate + thioredoxin = arsenite + thioredoxin disulfide. Thioredoxin disulfide is also known as oxidized thioredoxin.","definition_xrefs":["MetaCyc:RXN-10737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsenate reductase activity","termid":"GO:0030611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arsenate reductase (thioredoxin) activity","termid":"GO:0030612"}


id: PBO:0108589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 13B","termid":"PBO:0108589"}


id: PBO:0041030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain PHD finger transcription factor pseudogene 1","termid":"PBO:0041030"}


id: FYPO:0006546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of one or more lipids in a cellular membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0097035","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal membrane lipid distribution","synonyms":[{"name":"normal membrane lipid distribution during mitotic cell cycle","type":"related"},{"name":"normal membrane lipid distribution during vegetative growth","type":"exact"},{"name":"normal regulation of membrane lipid distribution","type":"exact"}],"termid":"FYPO:0006546"}


id: GO:0051094
data:
  {"annotated_genes":["SJAG_03581","SJAG_02169","SJAG_03453","SJAG_01212","SJAG_04853","SJAG_01794","SJAG_02379","SJAG_00514","SJAG_03501","SJAG_04509","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90620,85895,91900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[98384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[114402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075319"},{"annotations":[83929,86875,85899,89512,107508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"},{"annotations":[105008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"},{"annotations":[86759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043938"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"positively_regulates","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01212":null,"SJAG_01794":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_03453":null,"SJAG_03501":null,"SJAG_03581":null,"SJAG_04509":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of developmental process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of developmental process","type":"narrow"},{"name":"stimulation of developmental process","type":"narrow"},{"name":"up regulation of developmental process","type":"exact"},{"name":"up-regulation of developmental process","type":"exact"},{"name":"upregulation of developmental process","type":"exact"}],"termid":"GO:0051094","terms_by_termid":{"GO:0043938":null,"GO:0051519":null,"GO:0075296":null,"GO:0075319":null,"GO:0090141":null,"GO:1902917":null,"GO:1903024":null}}


id: GO:0071346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon gamma is the only member of the type II interferon found so far.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to type II interferon","termid":"GO:0034341"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to type II interferon","synonyms":[{"name":"cellular response to gamma-interferon","type":"related"},{"name":"cellular response to immune interferon","type":"exact"},{"name":"cellular response to interferon-gamma","type":"broad"},{"name":"cellular response to type II IFN","type":"broad"}],"termid":"GO:0071346"}


id: PBO:0030087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuolated","termid":"PBO:0030087"}


id: PBO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATRIP, ATR checkpoint kinase regulatory subunit Rad26","termid":"PBO:0002522"}


id: GO:1905509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an interphase microtubule organizing center.","definition_xrefs":["PMID:19001497","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to interphase microtubule organizing center","synonyms":[{"name":"protein localisation in interphase microtubule organizing center","type":"exact"},{"name":"protein localisation to interphase microtubule organizing center","type":"exact"},{"name":"protein localization in interphase microtubule organizing center","type":"exact"}],"termid":"GO:1905509"}


id: PBO:0000653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc4 (predicted)","termid":"PBO:0000653"}


id: GO:0061975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of articular cartilage over time, from its formation to the mature structure.","definition_xrefs":["PMID:20097540","PMID:20679519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"articular cartilage development","synonyms":[{"name":"articular cartilage of joint development","type":"exact"}],"termid":"GO:0061975"}


id: GO:0018919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gamma-1,2,3,4,5,6-hexachlorocyclohexane (also known as Lindane), the most common form of hexachlorohexane, a halogenated organic insecticide that has been used worldwide for agriculture and public health.","definition_xrefs":["UM-BBD_pathwayID:ghch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexachlorocyclohexane metabolic process","termid":"GO:0019497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-1,2,3,4,5,6-hexachlorocyclohexane metabolic process","secondary_identifiers":["MetaCyc:GAMMAHEXCHLORDEG-PWY"],"synonyms":[{"name":"gamma-1,2,3,4,5,6-hexachlorocyclohexane metabolism","type":"exact"}],"termid":"GO:0018919"}


id: PBO:0075541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E21","termid":"PBO:0075541"}


id: PBO:0047276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group C","termid":"PBO:0047276"}


id: PBO:0065454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 2","termid":"PBO:0065454"}


id: PBO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.5","termid":"PBO:0000100"}


id: PBO:0067412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 523, pseudogene","termid":"PBO:0067412"}


id: GO:0018746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-3,4-oxide + H2O = trans-3,4-dihydrodiolphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-3,4-epoxide hydrolase activity (obsolete GO:0018746)","termid":"GO:0018746"}


id: GO:0050387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + H+ + urethane = CO2 + ethanol + NH4.","definition_xrefs":["EC:3.5.1.75","RHEA:21372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"urethanase activity","secondary_identifiers":["KEGG_REACTION:R02359","MetaCyc:URETHANASE-RXN"],"synonyms":[{"name":"urethane amidohydrolase (decarboxylating)","type":"related"},{"name":"urethane hydrolase activity","type":"related"}],"termid":"GO:0050387"}


id: GO:0050892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which nutrients are taken up from the contents of the intestine.","definition_xrefs":["GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal absorption","termid":"GO:0050892"}


id: PBO:0079666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 14","termid":"PBO:0079666"}


id: PBO:0079594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D N-terminal like (pseudogene)","termid":"PBO:0079594"}


id: RO:HOM0000050
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that involves genes from different species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_between-species_paralogy_relationship_with","synonyms":[{"name":"between-species paralogous to","type":"exact"}],"termid":"RO:HOM0000050"}


id: PBO:0040991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2 pseudogene 1","termid":"PBO:0040991"}


id: PBO:0043193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 2 like","termid":"PBO:0043193"}


id: FYPO:0002571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dGTP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular dNTP level","termid":"FYPO:0006401"},{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular dGTP level","synonyms":[{"name":"decreased cellular dGTP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dGTP level during vegetative growth","type":"exact"},{"name":"reduced cellular dGTP level","type":"exact"}],"termid":"FYPO:0002571"}


id: PBO:0087439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit F of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; required for the V1 domain to assemble onto the vacuolar membrane; the V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087439"}


id: PBO:0071976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 4","termid":"PBO:0071976"}


id: PBO:0050786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 2C","termid":"PBO:0050786"}


id: GO:0097220
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sieve plate that contains a single specialized sieve area.","definition_xrefs":["ISBN:0471738433","POC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sieve plate","termid":"GO:0097218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"simple sieve plate","termid":"GO:0097220"}


id: GO:0000506
data:
  {"annotated_genes":["SJAG_04119","SJAG_02804","SJAG_06383","SJAG_03066","SJAG_02913","SJAG_04881"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89021,89110,104712,106060,107746,113410],"is_not":false,"summary":null,"term":"GO:0000506"}]},"cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the transfer of GlcNAc from UDP-GlcNAc to an acceptor phosphatidylinositol, the first step in the production of GPI anchors for cell surface proteins. The complex contains PIG-A, PIG-C, PIG-H, PIG-Q, PIG-P, and DPM2 in human, and Eri1p, Gpi1p, Gpi2p, Gpi15p, Gpi19p, and Spt14p in budding yeast.","definition_xrefs":["GOC:rb","PMID:15163411","GOC:kp","PMID:10944123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_04119":null,"SJAG_04881":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005789","GO:0032991","GO:0005783"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-GlcNAc transferase complex","type":"exact"},{"name":"GPI-GnT complex","type":"exact"},{"name":"GPI-N-acetylglucosaminyltransferase complex","type":"exact"}],"termid":"GO:0000506","terms_by_termid":{"GO:0000506":null}}


id: PBO:0078102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 10","termid":"PBO:0078102"}


id: PBO:0011960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wild_type","termid":"PBO:0011960"}


id: PBO:0074209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 2","termid":"PBO:0074209"}


id: PBO:0065830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6D, member RAS oncogene family","termid":"PBO:0065830"}


id: PBO:0088552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gpl1-Gih35-Wdr83 complex WD repeat subunit Wdr83","termid":"PBO:0088552"}


id: GO:0051070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactomannan, a polysaccharide composed of D-galactosyl and D-mannosyl. The mannosyl units form the backbone structure (a linear main chain) with the D-galactosyl as single side units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"galactomannan metabolic process","termid":"GO:0051069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galactomannan biosynthetic process","synonyms":[{"name":"galactomannan anabolism","type":"exact"},{"name":"galactomannan biosynthesis","type":"exact"},{"name":"galactomannan formation","type":"exact"},{"name":"galactomannan synthesis","type":"exact"}],"termid":"GO:0051070"}


id: PBO:0062628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 5 pseudogene","termid":"PBO:0062628"}


id: GO:0052878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + linoleate = (8R,9Z,12Z)-8-hydroperoxyoctadeca-9,12-dienoate.","definition_xrefs":["RHEA:25395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"linoleate 8R-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R07061","EC:1.13.11.60","MetaCyc:RXN-12756"],"synonyms":[{"name":"5,8-LDS (bifunctional enzyme) activity","type":"related"},{"name":"5,8-linoleate diol synthase (bifunctional enzyme) activity","type":"related"},{"name":"7,8-LDS (bifunctional enzyme) activity","type":"related"},{"name":"7,8-linoleate diol synthase (bifunctional enzyme) activity","type":"related"},{"name":"linoleate diol synthase activity","type":"related"}],"termid":"GO:0052878"}


id: PBO:0067726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 24","termid":"PBO:0067726"}


id: PR:P41000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cps3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cps3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.02","synonyms":[{"name":"Spom972h-cps3","type":"exact"},{"name":"meiotically up-regulated gene 188 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41000"}


id: PBO:0059310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51 pseudogene 1","termid":"PBO:0059310"}


id: GO:0000482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 5S ribosomal RNA (rRNA) molecule into a mature 5S rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5S rRNA","termid":"GO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"maturation of 5S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000482"}


id: PBO:0057920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3622b","termid":"PBO:0057920"}


id: FYPO:0002945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is in G0 phase is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during G0","synonyms":[{"name":"increased RNA accumulation during G0","type":"related"},{"name":"increased RNA level during cell quiescence","type":"exact"},{"name":"increased RNA level during quiescence","type":"exact"},{"name":"increased transcript level during G0","type":"exact"}],"termid":"FYPO:0002945"}


id: PBO:0042479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 5","termid":"PBO:0042479"}


id: PBO:0028343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_post-anaphase_array","termid":"PBO:0028343"}


id: PBO:0034738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensor Fra2","termid":"PBO:0034738"}


id: GO:1900345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from methanethiol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from methanethiol","termid":"GO:2001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from methanethiol","termid":"GO:1900345"}


id: PBO:0076464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAMALIN antisense RNA 1","termid":"PBO:0076464"}


id: GO:0016863
data:
  {"annotated_genes":["SJAG_03598","SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000247"},{"annotations":[97967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, one or more carbon-carbon double bonds in the molecule are rearranged, and no oxidized product appears.","definition_xrefs":["GOC:mah","EC:5.3.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03598":null,"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, transposing C=C bonds","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intramolecular isomerase activity, transposing C=C bonds","type":"exact"}],"termid":"GO:0016863","terms_by_termid":{"GO:0000247":null,"GO:0004452":null}}


id: PBO:0039617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2 receptor","termid":"PBO:0039617"}


id: PBO:0081114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND3 divergent transcript","termid":"PBO:0081114"}


id: GO:0046301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-N-isopropylacetanilide biosynthetic process (obsolete GO:0046301)","synonyms":[{"name":"2-chloro-N-isopropylacetanilide anabolism","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthesis","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthetic process","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide formation","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide synthesis","type":"exact"}],"termid":"GO:0046301"}


id: GO:0048360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur in the root cap; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root cap mucilage metabolic process","synonyms":[{"name":"root cap mucilage metabolism","type":"exact"}],"termid":"GO:0048360"}


id: GO:0006746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the reduced form of flavin adenine dinucleotide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"FADH2 metabolic process","synonyms":[{"name":"FADH2 metabolism","type":"exact"},{"name":"reduced flavin adenine dinucleotide metabolic process","type":"exact"}],"termid":"GO:0006746"}


id: GO:0097635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of autophagosome membrane (obsolete GO:0097635)","synonyms":[{"name":"autophagic vacuole peripheral membrane","type":"related"},{"name":"extrinsic component of autophagic vacuole membrane","type":"exact"},{"name":"extrinsic to autophagic vacuole membrane","type":"exact"}],"termid":"GO:0097635"}


id: PR:U3H041
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.02c gene.","definition_xrefs":["UniProtKB:U3H041","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase SPBPB21E7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.02c","synonyms":[{"name":"Spom972h-SPBPB21E7.02c","type":"exact"}],"termid":"PR:U3H041"}


id: PR:O94686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L43-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.02c","synonyms":[{"name":"L37B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl4302","type":"exact"}],"termid":"PR:O94686"}


id: GO:0050506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + vomilenine = H+ + raucaffricine + UDP.","definition_xrefs":["RHEA:19385","EC:2.4.1.219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vomilenine glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.219-RXN","KEGG_REACTION:R05882"],"synonyms":[{"name":"UDP-glucose:vomilenine 21-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21beta-D-glucosyltransferase activity","type":"related"},{"name":"vomilenine-glucosyltransferase activity","type":"related"}],"termid":"GO:0050506"}


id: GO:0009402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete toxin resistance (obsolete GO:0009402)","synonyms":[{"name":"toxin resistance","type":"exact"}],"termid":"GO:0009402"}


id: PBO:0054536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1936","termid":"PBO:0054536"}


id: PBO:0065668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type Q","termid":"PBO:0065668"}


id: GO:1900118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of execution phase of apoptosis","termid":"GO:1900117"},{"relation_name":"negatively_regulates","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of execution phase of apoptosis","synonyms":[{"name":"down regulation of execution phase of apoptosis","type":"exact"},{"name":"down-regulation of execution phase of apoptosis","type":"exact"},{"name":"downregulation of execution phase of apoptosis","type":"exact"},{"name":"inhibition of execution phase of apoptosis","type":"narrow"}],"termid":"GO:1900118"}


id: PBO:0045616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 27 (pseudogene)","termid":"PBO:0045616"}


id: PBO:0004588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNA","termid":"PBO:0004588"}


id: PBO:0048765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid modulatory element binding protein 1","termid":"PBO:0048765"}


id: CHEBI:16907
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-nitroquinoline N-oxide","termid":"CHEBI:16907"}


id: PBO:0070881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 13","termid":"PBO:0070881"}


id: GO:0035198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.","definition_xrefs":["PMID:15066283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory RNA binding","termid":"GO:0061980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"miRNA binding","synonyms":[{"name":"microRNA binding","type":"exact"}],"termid":"GO:0035198"}


id: PBO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIC domain protein adenylyltransferase","termid":"PBO:0047618"}


id: PR:000027505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase HOG1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitogen-activated protein kinase HOG1","termid":"PR:000027499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sty1/UnMod","pombase_gene_id":"SPAC24B11.06c","synonyms":[{"name":"PomBase_original_PRO_term_name: mitogen-activated protein kinase sty1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-HOG1/UnMod","type":"exact"},{"name":"sty1/UnMod","type":"exact"}],"termid":"PR:000027505"}


id: PBO:0070607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 75","termid":"PBO:0070607"}


id: GO:0010434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a bract. This process pertains to the initial formation of a structure from unspecified parts. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence.","definition_xrefs":["GOC:tb","PO:0009055","PMID:16554366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ formation","termid":"GO:1905393"},{"relation_name":"part_of","term_name":"bract morphogenesis","termid":"GO:0010433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bract formation","termid":"GO:0010434"}


id: PATO:0000975
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000975 absolute porosity (obsolete PATO:0000975)","termid":"PATO:0000975"}


id: PBO:0085306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase subunit of the trehalose-6-P synthase/phosphatase complex; involved in the synthesis of storage carbohydrate trehalose; positive regulator of autophagy involved in the dephosphorylation of Rim15p leading to ATG8 induction; expression is induced by stress conditions and repressed by the Ras-cAMP pathway; protein abundance increases in response to DNA replication stress","termid":"PBO:0085306"}


id: FYPO:0006028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:11694585"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"decreased protein localization to actin cortical patch","termid":"FYPO:0006120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to actin cortical patch, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to actin cortical patch, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to actin cortical patch, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to actin cortical patch, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to actin patch, with protein mislocalized to cytoplasm","type":"exact"},{"name":"reduced protein localization to actin cortical patch, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0006028"}


id: PBO:0040029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 4","termid":"PBO:0040029"}


id: PR:O14344
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inosine-5'-monophosphate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-5'-monophosphate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.14c","secondary_identifiers":["UniProtKB:O14344"],"synonyms":[{"name":"IMP dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMPD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMPDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC2F12.14c","type":"related"},{"name":"Spom972h-guaB","type":"exact"}],"termid":"PR:O14344"}


id: GO:0006473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein acetylation","synonyms":[{"name":"protein amino acid acetylation","type":"exact"}],"termid":"GO:0006473"}


id: GO:0046709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of IDP, inosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"IDP metabolic process","termid":"GO:0046707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"IDP catabolic process","synonyms":[{"name":"IDP breakdown","type":"exact"},{"name":"IDP catabolism","type":"exact"},{"name":"IDP degradation","type":"exact"}],"termid":"GO:0046709"}


id: GO:0052842
data:
  {"annotated_genes":["SJAG_04870","SJAG_01154","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101313,84758,111219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052843"},{"annotations":[101314,84759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol pentakisphosphate + H2O = 1D-myo-inositol hexakisphosphate + phosphate.","definition_xrefs":["PMID:11502751","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inositol diphosphate pentakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855198","Reactome:R-HSA-2023971"],"termid":"GO:0052842","terms_by_termid":{"GO:0052843":null,"GO:0052845":null}}


id: SO:0000597
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The insertion and deletion of uridine (U) residues, usually within coding regions of mRNA transcripts of cryptogenes in the mitochondrial genome of kinetoplastid protozoa.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000597 transcript_edited_by_U_insertion/deletion (obsolete SO:0000597)","termid":"SO:0000597"}


id: PBO:0045665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin associated protein","termid":"PBO:0045665"}


id: PBO:0031539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_two-spore_ascus","termid":"PBO:0031539"}


id: PBO:0082327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; required for optimal CDC20 transcription; interacts with Rpn12p and Ubr1p; mutant has aneuploidy tolerance","termid":"PBO:0082327"}


id: GO:0016168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chlorophyll; a compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole binding","termid":"GO:0046906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chlorophyll binding","termid":"GO:0016168"}


id: PBO:0029866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_undivided_germinated_spores_and_divided_germinated_spores_(obsolete_FYPO:0002371)","termid":"PBO:0029866"}


id: FYPO:0003898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glycerol and ethanol as the carbon sources.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on glycerol/ethanol carbon source","synonyms":[{"name":"normal cell population growth on glycerol/ethanol carbon source","type":"exact"},{"name":"normal vegetative cell population growth on glycerol/ethanol carbon source","type":"exact"}],"termid":"FYPO:0003898"}


id: GO:0098950
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic early endosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic early endosome membrane (obsolete GO:0098950)","synonyms":[{"name":"intrinsic to postsynaptic early endosome membrane","type":"narrow"}],"termid":"GO:0098950"}


id: GO:0072149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular visceral epithelial cell. A glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"podocyte differentiation","termid":"GO:0072112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte cell fate commitment","synonyms":[{"name":"glomerular visceral epithelial cell fate commitment","type":"exact"}],"termid":"GO:0072149"}


id: PBO:0052330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1671","termid":"PBO:0052330"}


id: PBO:0082534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; expressed under anaerobic conditions and required for anaerobic growth; transcription is also induced by cold shock; member of the Srp1p/Tip1p family of serine-alanine-rich proteins","termid":"PBO:0082534"}


id: PBO:0073960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 9","termid":"PBO:0073960"}


id: PBO:0084855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; not essential for mitochondrial translation","termid":"PBO:0084855"}


id: PBO:0081166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFX antisense RNA 1","termid":"PBO:0081166"}


id: GO:0061389
data:
  {"annotated_genes":["SJAG_03705","SJAG_04724","SJAG_01456","SJAG_04322","SJAG_03486","SJAG_00216","SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84089,106899,112654,114083,95821,102970,99598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"}]},"cv_name":"biological_process","definition":"Any process that modulates the direction of cell growth.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_01456":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of direction of cell growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061389","terms_by_termid":{"GO:0051523":null}}


id: PBO:0065159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 9","termid":"PBO:0065159"}


id: FYPO:0007236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at early replication origins (i.e. origins that normally fire early in S phase) begins later than normal.","definition_xrefs":["PMID:22279046","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to chromatin at replication origin","termid":"FYPO:0006734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of protein localization to chromatin at early replication origin","synonyms":[{"name":"delayed onset of protein localisation to chromatin at early replication origin","type":"exact"},{"name":"delayed onset of protein localization to chromatin at early origin","type":"exact"},{"name":"delayed onset of protein localization to chromatin at early replication origins during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to chromatin at early replication origins during vegetative growth","type":"exact"},{"name":"delayed protein localization to chromatin at early replication origin","type":"exact"}],"termid":"FYPO:0007236"}


id: PBO:0066094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 4C, pseudogene","termid":"PBO:0066094"}


id: GO:0030081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein-pigment complex that absorbs light at 800 and 820 nm; is peripherally associated to the bacterial reaction center; transfers excitation energy to the B875 antenna complex.","definition_xrefs":["GOC:kd","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"light-harvesting complex, peripheral complex","termid":"GO:0030079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"B800-820 antenna complex","synonyms":[{"name":"LH3 complex","type":"exact"},{"name":"light harvesting complex III","type":"exact"}],"termid":"GO:0030081"}


id: PBO:0084792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; required for normal mitochondrial morphology and inheritance; component of the mitochondria-ER-cortex-anchor (MECA); interacts with Num1p to link the ER and mitochondria at the cell cortex; proposed involvement in the formation of Dnm1p and Num1p-containing cortical anchor complexes that promote mitochondrial fission","termid":"PBO:0084792"}


id: GO:0032404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mismatch repair complex binding","termid":"GO:0032404"}


id: PBO:0052252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 21","termid":"PBO:0052252"}


id: PBO:0113747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHC pseudogene 3","termid":"PBO:0113747"}


id: MOD:01893
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-malonyl-L-lysine.","definition_xrefs":["PubMed:21908771","RESID:AA0568","PubMed:8349414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-malonyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(carboxyacetyl)amino]hexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(carboxyacetyl)azanyl]hexanoic acid","type":"exact"},{"name":"MOD_RES N6-malonyllysine","type":"exact"},{"name":"N(epsilon)-(malonyl)lysine","type":"exact"},{"name":"N6-(carboxyacetyl)lysine","type":"exact"},{"name":"N6-malonyl-L-lysine","type":"exact"},{"name":"N6-malonyllysine","type":"exact"},{"name":"malonyllysine","type":"exact"}],"termid":"MOD:01893"}


id: GO:0032771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of a tyrosinase enzyme.","definition_xrefs":["PMID:2494997","GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monooxygenase activity","termid":"GO:0032768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tyrosinase activity","synonyms":[{"name":"regulation of monophenol monooxygenase activity","type":"related"},{"name":"regulation of monophenol oxygenase activity","type":"exact"}],"termid":"GO:0032771"}


id: GO:0018039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-glutamine amide by hydrolysis and oxidation of an interior Gln-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0086"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glutamine amidation (obsolete GO:0018039)","termid":"GO:0018039"}


id: GO:1900882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 17-methylnonadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900882"}


id: GO:0010927
data:
  {"annotated_genes":["SJAG_02529","SJAG_00971","SJAG_04470","SJAG_02241","SJAG_02700","SJAG_00826","SJAG_01483","SJAG_01769","SJAG_03688","SJAG_00114","SJAG_01943","SJAG_00514","SJAG_00405","SJAG_04080","SJAG_04483","SJAG_02248","SJAG_04271","SJAG_01321","SJAG_05309","SJAG_03915","SJAG_04010","SJAG_02169","SJAG_03250","SJAG_02864","SJAG_03453","SJAG_01993","SJAG_01894","SJAG_04509","SJAG_01794","SJAG_04615","SJAG_00486","SJAG_00821","SJAG_03013","SJAG_04238","SJAG_04922","SJAG_00974","SJAG_00663","SJAG_04901","SJAG_04868","SJAG_04275","SJAG_03746","SJAG_02989","SJAG_03536","SJAG_02320","SJAG_02736","SJAG_02379","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84248,87791,86277,113961,84738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[93657,106251,105433,87522,101085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031321"},{"annotations":[93658,101402,110089,95913,97794,94903,113103,115191,95912,106252,95982,93617,87313,103512,114706,91419,115007],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[95915,110090,99023,95914,93618,92936,88314,100244,102949,103848],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[94975,88533,95056,110479,94368,84293],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[86758],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[86875,107508,83929,85899,89512],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902917"},{"annotations":[113106],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903023"},{"annotations":[96199,112137,102126,95917,90546,95916],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The cellular component assembly that is part of the initial shaping of the component during its developmental progression.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cellular anatomical entity morphogenesis","termid":"GO:0032989"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02379":null,"SJAG_02529":null,"SJAG_02700":null,"SJAG_02736":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03013":null,"SJAG_03250":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cellular component assembly involved in morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010927","terms_by_termid":{"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0070583":null,"GO:1902917":null,"GO:1903023":null,"GO:1903024":null,"GO:1904600":null}}


id: PBO:0011105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX epimerase (predicted)","termid":"PBO:0011105"}


id: PBO:0040532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-N-acetylgalactosaminyltransferase 2","termid":"PBO:0040532"}


id: PBO:0041108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 1","termid":"PBO:0041108"}


id: PBO:0074232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC47A1 pseudogene 1","termid":"PBO:0074232"}


id: GO:0106129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","PMID:23447642","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium entry","termid":"GO:2001256"},{"relation_name":"positively_regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of store-operated calcium entry","termid":"GO:0106129"}


id: GO:0061966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial formation of the type asymmetry in an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["GOC:BHF","PMID:18629866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of left/right asymmetry","termid":"GO:0061966"}


id: MOD:00840
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with an isocyanate compound.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocyanate reagent derivatized residue","termid":"MOD:00840"}


id: GO:0051845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of immune avoidance that does not directly interfere with the symbiont immune system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12439615"],"gene_count":0,"genotype_count":0,"name":"obsolete passive evasion of symbiont immune response (obsolete GO:0051845)","synonyms":[{"name":"passive evasion of symbiont immune response","type":"exact"},{"name":"passive immune evasion","type":"broad"}],"termid":"GO:0051845"}


id: PBO:0064250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin","termid":"PBO:0064250"}


id: PATO:0000724
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000724 low yield (obsolete PATO:0000724)","termid":"PATO:0000724"}


id: PBO:0038915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5","termid":"PBO:0038915"}


id: PBO:0061323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B1, pseudogene","termid":"PBO:0061323"}


id: PBO:0061593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTRK3 antisense RNA 1","termid":"PBO:0061593"}


id: PR:O13886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC823.02 gene.","definition_xrefs":["UniProtKB:O13886","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C823.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.02","synonyms":[{"name":"Spom972h-SPAC823.02","type":"exact"}],"termid":"PR:O13886"}


id: GO:0015200
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95333],"is_not":false,"summary":null,"term":"GO:0015200"}]},"cv_name":"molecular_function","definition":"Enables directed movement of methylammonium, CH3NH2, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transmembrane transporter activity","termid":"GO:0005275"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"methylammonium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015200","terms_by_termid":{"GO:0015200":null}}


id: PBO:0088907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane borate efflux transmembrane transporter Bor1","termid":"PBO:0088907"}


id: PBO:0050901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha inducible protein 27 like 1","termid":"PBO:0050901"}


id: GO:0140331
data:
  {"annotated_genes":["SJAG_00669"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67825],"is_not":false,"summary":null,"term":"GO:0140331"}]},"cv_name":"biological_process","definition":"The movement of an aminophospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminophospholipid transport","termid":"GO:0015917"},{"relation_name":"is_a","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00669":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"aminophospholipid translocation","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0140331","terms_by_termid":{"GO:0140331":null}}


id: GO:0140315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an iron ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:27780864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sequestering activity","termid":"GO:0140487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140313"],"is_obsolete":false,"name":"iron ion sequestering activity","termid":"GO:0140315"}


id: GO:1902956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial electron transport, NADH to ubiquinone.","definition_xrefs":["GOC:TermGenie","PMID:23530063","GO_REF:0000058","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aerobic respiration","termid":"GO:1903715"},{"relation_name":"regulates","term_name":"mitochondrial electron transport, NADH to ubiquinone","termid":"GO:0006120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"regulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"regulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"}],"termid":"GO:1902956"}


id: PBO:0077409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 144","termid":"PBO:0077409"}


id: FYPO:0001001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition, instead of the normal G1 phase, when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:19366728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to nitrogen starvation","termid":"FYPO:0000710"},{"relation_name":"is_a","term_name":"cell cycle arrest at mitotic G2/M phase transition during starvation","termid":"FYPO:0001151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen depletion","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen deprivation","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G2 phase during nitrogen starvation","type":"related"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","type":"exact"},{"name":"abolished mitotic G2/M phase transition during nitrogen starvation","type":"related"},{"name":"advanced nitrogen deprivation-induced G1 arrest","type":"related"},{"name":"cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","type":"exact"},{"name":"mitotic G2/M phase transition arrest during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001001"}


id: GO:0043499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a eukaryotic cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete eukaryotic cell surface binding (obsolete GO:0043499)","synonyms":[{"name":"eukaryotic cell surface binding","type":"exact"}],"termid":"GO:0043499"}


id: PBO:0073801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 7","termid":"PBO:0073801"}


id: GO:0001165
data:
  {"annotated_genes":["SJAG_02747","SJAG_05331"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89202,112623],"is_not":false,"summary":null,"term":"GO:0001165"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase I. RNA polymerase I elements are referred to either enhancers or upstream control element (UCE, or alternately referred to as the upstream element).","definition_xrefs":["GOC:txnOH","PMID:12865296","PMID:14969726","PMID:8057832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulatory region sequence-specific DNA binding","termid":"GO:0001163"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02747":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"RNA polymerase I cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001166"],"synonyms":[{"name":"RNA polymerase I enhancer sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase I upstream control element sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase I upstream element sequence-specific DNA binding","type":"related"}],"termid":"GO:0001165","terms_by_termid":{"GO:0001165":null}}


id: PBO:0085645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic crossing over; component of the Synaptonemal Complex (SC) along with Ecm11p; required for the efficient loading of the SC transverse filament protein, Zip1p; promotes SUMOylation of Ecm11p; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; transcription is regulated by Ume6p and induced in response to alpha factor","termid":"PBO:0085645"}


id: GO:0043491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with phosphatidylinositol 3-kinase (PI3K) activation, production of phosphatidylinositol 3-phosphate (PI3P), activation of PDK1, which recruits and ending with the activation of protein kinase B (PKB, also known as Akt). PI3K is activated by cell surface receptors. Note that PTEN is an inhibitor of the pathway.","definition_xrefs":["PMID:20517722","PMID:22952397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase/protein kinase B signal transduction","synonyms":[{"name":"AKT signal transduction","type":"related"},{"name":"AKT signaling","type":"related"},{"name":"AKT signaling cascade","type":"related"},{"name":"AKT signalling cascade","type":"related"},{"name":"PI3K-PKB/Akt pathway","type":"exact"},{"name":"PI3K/Akt signal transduction","type":"exact"},{"name":"PI3K/PKB signal transduction","type":"exact"},{"name":"PKB signal transduction","type":"related"},{"name":"PKB signaling","type":"related"},{"name":"PKB signaling cascade","type":"related"},{"name":"PKB signalling cascade","type":"related"},{"name":"phosphatidylinositol 3-kinase signaling/protein kinase B signal transduction","type":"exact"},{"name":"protein kinase B signal transduction","type":"related"},{"name":"protein kinase B signaling","type":"related"},{"name":"protein kinase B signaling cascade","type":"related"},{"name":"protein kinase B signalling cascade","type":"related"}],"termid":"GO:0043491"}


id: PBO:0040837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BIVM-ERCC5 readthrough","termid":"PBO:0040837"}


id: PBO:0073842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC8A1 antisense RNA 1","termid":"PBO:0073842"}


id: GO:0016511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete endothelin-converting enzyme activity (obsolete GO:0016511)","synonyms":[{"name":"endothelin-converting enzyme activity","type":"exact"}],"termid":"GO:0016511"}


id: FYPO:0002830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during vegetative growth","synonyms":[{"name":"delayed onset of protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein/peptide phosphorylation during vegetative growth","type":"exact"},{"name":"delayed protein phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002830"}


id: PBO:0004547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAVE complex subunit Rav1","termid":"PBO:0004547"}


id: PBO:0050937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 7","termid":"PBO:0050937"}


id: GO:0036458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a hepatocyte growth factor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hepatocyte growth factor binding","synonyms":[{"name":"HGF binding","type":"exact"}],"termid":"GO:0036458"}


id: GO:0043828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylaminomethyl-2-thiouridine + selenophosphate = 5-methylaminomethyl-2-selenouridine + phosphate (at the wobble position in tRNA).","definition_xrefs":["PMID:14594807","RHEA:42716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenotransferase activity","termid":"GO:0016785"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0003674","GO:0003824","GO:0140101"],"is_obsolete":false,"name":"tRNA 2-selenouridine synthase activity","secondary_identifiers":["EC:2.9.1.3","MetaCyc:RXN0-2281"],"termid":"GO:0043828"}


id: GO:0050627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + mycothiol = NAD(P)H + H+ + mycothione.","definition_xrefs":["MetaCyc:1.8.1.15-RXN","EC:1.8.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mycothione reductase activity","synonyms":[{"name":"mycothiol-disulfide reductase activity","type":"related"},{"name":"mycothiol:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050627"}


id: PBO:0114493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitofusin, involved in mitochondrial outer membrane fusion; mediates contacts between mitochondria and peroxisomes that regulate mitochondrial fusion; GTPase domain is required for auto-oligomerization and for efficient tethering, homotypic fusion and degradation of Fzo1p; role in mitochondrial genome maintenance; targeted for destruction by SCF-Mdm30p and the cytosolic ubiquitin-proteasome system; activity regulated by ubiquitination at conserved lysines and by deubiquitinases Ubp2p and Ubp12p","termid":"PBO:0114493"}


id: GO:0052589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (S)-malate + a menaquinone = oxaloacetate + a menaquinol.","definition_xrefs":["MetaCyc:RXNI-3"],"gene_count":0,"genotype_count":0,"name":"obsolete malate dehydrogenase (menaquinone) activity (obsolete GO:0052589)","termid":"GO:0052589"}


id: GO:0099037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endosome membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of presynaptic endosome membrane (obsolete GO:0099037)","termid":"GO:0099037"}


id: PBO:0027673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_ascospore_release_from_ascus","termid":"PBO:0027673"}


id: GO:0005082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein tyrosine phosphatase signaling protein activity (obsolete GO:0005082)","synonyms":[{"name":"receptor signaling protein tyrosine phosphatase signaling protein activity","type":"exact"},{"name":"receptor signalling protein tyrosine phosphatase signalling protein activity","type":"exact"}],"termid":"GO:0005082"}


id: PBO:0052016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 6, arginine demethylase and lysine hydroxylase","termid":"PBO:0052016"}


id: PBO:0043099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 11","termid":"PBO:0043099"}


id: GO:0019788
data:
  {"annotated_genes":["SJAG_01018"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061654"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of NEDD8 from one protein to another via the reaction X-NEDD8 + Y = Y-NEDD8 + X, where both X-NEDD8 and Y-NEDD8 are covalent linkages.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0019787","GO:0003674","GO:0016746","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"NEDD8 transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8951648","Reactome:R-HSA-8951661","Reactome:R-HSA-8952044","Reactome:R-HSA-8952626","Reactome:R-HSA-8951764","GO:0042295","Reactome:R-HSA-8956025","Reactome:R-HSA-8952638","Reactome:R-HSA-8952631","GO:0016976","GO:0019945","Reactome:R-HSA-8952618"],"synonyms":[{"name":"Hub1 conjugating enzyme activity","type":"related"},{"name":"NEDD8 conjugating enzyme activity","type":"related"},{"name":"RUB1 conjugating enzyme activity","type":"related"}],"termid":"GO:0019788","terms_by_termid":{"GO:0061654":null}}


id: GO:2001296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N(omega)-methyl-L-arginine.","definition_xrefs":["GOC:rs","PMID:10510241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"N(omega)-methyl-L-arginine metabolic process","synonyms":[{"name":"N(omega)-methyl-L-arginine metabolism","type":"exact"}],"termid":"GO:2001296"}


id: PBO:0052378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 21A","termid":"PBO:0052378"}


id: PBO:0041094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRWD1 antisense RNA 2","termid":"PBO:0041094"}


id: PBO:0082890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase-activating kinase; required for passage through the cell cycle; phosphorylates and activates Cdc28p; nucleotide-binding pocket differs significantly from those of most other protein kinases; required for premeiotic DNA synthesis, expression of early and middle sporulation specific genes and direct phosphorylation of the Smk1p MAPK to regulate spore morphogenesis","termid":"PBO:0082890"}


id: SO:0000631
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding for more than one gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"polycistronic_transcript","termid":"SO:0000078"},{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_primary_transcript","synonyms":[{"name":"polycistronic primary transcript","type":"exact"}],"termid":"SO:0000631"}


id: PBO:0076312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptojanin 2 binding protein","termid":"PBO:0076312"}


id: GO:0032394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an MHC class Ib protein complex and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"MHC class Ib receptor activity","synonyms":[{"name":"T cell receptor activity","type":"related"},{"name":"alpha-beta T cell receptor activity","type":"related"},{"name":"gamma-delta T cell receptor activity","type":"related"}],"termid":"GO:0032394"}


id: PBO:0051566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 13","termid":"PBO:0051566"}


id: PBO:0034774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex ATPase subunit Psm1/Smc1","termid":"PBO:0034774"}


id: PBO:0078997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 4-1","termid":"PBO:0078997"}


id: FYPO:0005069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation fails to separate chromosomes into two equal masses after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase. Unequal mitotic sister chromatid separation may be complete, with two distinct unequal DNA masses located at or near the ends of an elongated mitotic spindle, or incomplete.","definition_xrefs":["PomBase:mah","PMID:18180284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal mitotic sister chromatid segregation","termid":"FYPO:0003241"},{"relation_name":"is_a","term_name":"abnormal mitosis following normal mitosis","termid":"FYPO:0004588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000641","FYPO:0000337"],"is_obsolete":false,"name":"unequal mitotic sister chromatid segregation following normal mitosis","synonyms":[{"name":"mitotic chromosome nondisjunction following normal mitosis","type":"exact"},{"name":"unequal mitotic chromosome segregation following normal mitosis","type":"exact"},{"name":"unequal mitotic sister chromatid segregation during vegetative growth following normal mitosis","type":"exact"},{"name":"unequal mitotic sister chromatid separation following normal mitosis","type":"related"},{"name":"unequal sister chromatid segregation following normal mitosis during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005069"}


id: PBO:0057012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 103a-1","termid":"PBO:0057012"}


id: PBO:0079829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAP1-MVB12-associated (UMA) domain containing 1","termid":"PBO:0079829"}


id: PBO:0080474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitronectin","termid":"PBO:0080474"}


id: FYPO:0008261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of annosylinositol phosphorylceramide measured in a cell is lower than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:20388730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular mannosylinositol phosphorylceramide level","termid":"FYPO:0008261"}


id: PBO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bet1 (predicted)","termid":"PBO:0000747"}


id: FYPO:0006414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is higher than normal (i.e. lower than observed in wild-type cells) during interphase of the mitotic cell cycle. Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PomBase:mah","PMID:17452352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of histone gene mRNA during vegetative growth","termid":"FYPO:0006413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased level of histone gene mRNA during mitotic interphase","synonyms":[{"name":"increased histone gene mRNA accumulation during mitotic interphase","type":"related"},{"name":"increased level of histone gene RNA during mitotic interphase","type":"exact"},{"name":"increased level of histone gene mRNA during interphase of mitotic cell cycle","type":"exact"},{"name":"increased level of histone gene transcripts during mitotic interphase","type":"exact"}],"termid":"FYPO:0006414"}


id: FYPO:0005941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break clipping is normal (i.e. indistinguishable from wild type). Meiotic DNA double-strand break clipping is the process by which SPO11/Rec12-oligonucleotide complexes are removed from 5' DNA double-strand breaks induced during meiosis.","definition_xrefs":["GO:1990898","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic DNA double-strand break clipping","termid":"FYPO:0005941"}


id: SO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 2S rRNA is a 30 nucleotide RNA component of the large subunit of cytosolic ribosomes in Drosophila and at least some other Diptera. It is homologous to the 3' part of other 5.8S rRNA molecules. The 3' end of the 5.8S molecule is able to base-pair with the 5' end of the 2S rRNA to generate a helical region equivalent in position to the 'GC-rich hairpin' found in all previously sequenced 5.8S molecules.","definition_xrefs":["PMID:768488","PMID:4847940","PMID:10788608","PMID:407103"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_2S_gene","termid":"SO:0002336"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_2S_rRNA","synonyms":[{"name":"cytosolic 2S rRNA","type":"exact"},{"name":"cytosolic rRNA 2S","type":"exact"}],"termid":"SO:0002337"}


id: FYPO:0003127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of nitric oxide measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular reactive oxygen species level during vegetative growth","termid":"FYPO:0002780"},{"relation_name":"is_a","term_name":"altered cellular nitric oxide level","termid":"FYPO:0006408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular nitric oxide level during vegetative growth","synonyms":[{"name":"decreased cellular NO level during vegetative growth","type":"exact"},{"name":"decreased cellular nitric oxide level during mitotic cell cycle","type":"related"},{"name":"decreased nitric oxide accumulation during vegetative growth","type":"related"},{"name":"reduced cellular nitric oxide level during vegetative growth","type":"exact"}],"termid":"FYPO:0003127"}


id: PBO:0069899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1190, pseudogene","termid":"PBO:0069899"}


id: PBO:0024852
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae ERO1","termid":"PBO:0024852"}


id: PBO:0078903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 12-1","termid":"PBO:0078903"}


id: PR:Q09675
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3102 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.02c","synonyms":[{"name":"Spom972h-hsp3102","type":"exact"},{"name":"glyoxalase 3 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09675"}


id: FYPO:0004419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is abolished, and the protein is instead present in the nucleus at a greater level than normal.","definition_xrefs":["PomBase:mah","PomBase:al","PMID:17362205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to cytoplasm with increased protein localization to nucleus","synonyms":[{"name":"abolished protein localisation to cytoplasm with increased protein localisation to nucleus","type":"related"},{"name":"abolished protein localization to cytoplasm with increased protein localization to nucleus during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cytoplasm with increased protein localization to nucleus during vegetative growth","type":"exact"},{"name":"protein localization to cytoplasm abolished with increased protein localization to nucleus","type":"exact"}],"termid":"FYPO:0004419"}


id: PBO:0084908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitofusin, protein involved in mitochondrial outer membrane fusion; role in mitochondrial genome maintenance; efficient tethering and degradation of Fzo1p requires an intact N-terminal GTPase domain; targeted for destruction by the ubiquitin ligase SCF-Mdm30p and the cytosolic ubiquitin-proteasome system; activity regulated by ubiquitylation at conserved lysine residues and by  deubiquitylases Ubp2p and Ubp12p","termid":"PBO:0084908"}


id: FYPO:0006566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable under conditions of sulfur starvation.","definition_xrefs":["PomBase:mah","PMID:9372444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal viability upon sulfur starvation","synonyms":[{"name":"normal cell population viability upon sulfur starvation","type":"exact"},{"name":"normal viability upon sulphur starvation","type":"exact"}],"termid":"FYPO:0006566"}


id: PBO:0081644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 570","termid":"PBO:0081644"}


id: PBO:0082900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-like protein that interacts with Pho85p; has sequence similarity to G1 cyclins PCL1 and PCL2","termid":"PBO:0082900"}


id: GO:0021583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the pons is generated and organized. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:cls","ISBN:0838580343","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons morphogenesis","termid":"GO:0021583"}


id: PBO:0082498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of a tRNA methyltransferase complex; Trm8p and Trm82p comprise an enzyme that catalyzes a methyl-transfer from S-adenosyl-l-methionine to the N(7) atom of guanine at position 46 in tRNA; Trm8 lacks catalytic activity if not bound to Trm82p","termid":"PBO:0082498"}


id: GO:0141086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of inflammasome-mediated signaling pathway","termid":"GO:0141085"},{"relation_name":"negatively_regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"negative regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141086"}


id: GO:0008660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-aminocyclopropane-1-carboxylate + H2O = 2-oxobutanate + NH4.","definition_xrefs":["RHEA:16933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase activity","secondary_identifiers":["EC:3.5.99.7","KEGG_REACTION:R00997","MetaCyc:4.1.99.4-RXN","GO:0018806","UM-BBD_reactionID:r0357"],"synonyms":[{"name":"1-aminocyclopropane carboxylic acid deaminase activity","type":"related"},{"name":"1-aminocyclopropane-1-carboxylate aminohydrolase (isomerizing)","type":"related"},{"name":"1-aminocyclopropane-1-carboxylate endolyase (deaminating) activity","type":"related"},{"name":"ACC deaminase activity","type":"related"}],"termid":"GO:0008660"}


id: PBO:0068430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, ribosomal 45S cluster 5","termid":"PBO:0068430"}


id: PR:O14286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family B member 7, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01534","PANTHER:PTHR24221:SF68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur clusters transporter atm1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.01","secondary_identifiers":["UniProtKB:O14286"],"synonyms":[{"name":"Spom972h-ABCB7","type":"exact"}],"termid":"PR:O14286"}


id: PBO:0034788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic centromere-SPB clustering protein Csi1","termid":"PBO:0034788"}


id: GO:0051360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP506 chromophore cross-link from the alpha-carboxyl carbon of residue n, an asparagine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["RESID:AA0380","PMID:10504696"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-asparagine 5-imidazolinone glycine (obsolete GO:0051360)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via L-asparagine 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via L-asparagine 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051360"}


id: SO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of ribosome entry site, specific to Eukaryotic organisms that overlaps part of both 5' UTR and CDS sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome_entry_site","termid":"SO:0000139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kozak_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Kozak_consensus_sequence"],"synonyms":[{"name":"kozak consensus","type":"exact"},{"name":"kozak consensus sequence","type":"exact"},{"name":"kozak sequence","type":"exact"}],"termid":"SO:0001647"}


id: SO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is acylated.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001721 H3K27_acylation_site (obsolete SO:0001721)","synonyms":[{"name":"H3K27 acylation site","type":"exact"},{"name":"H3K27Ac","type":"related"}],"termid":"SO:0001721"}


id: GO:0005681
data:
  {"annotated_genes":["SJAG_00998","SJAG_04497","SJAG_03112","SJAG_02005","SJAG_03279","SJAG_03711","SJAG_02844","SJAG_02308","SJAG_00498","SJAG_04385","SJAG_00363","SJAG_01408","SJAG_01654","SJAG_02560","SJAG_00597","SJAG_03469","SJAG_02455","SJAG_00425","SJAG_01331","SJAG_01819","SJAG_02686","SJAG_00313","SJAG_02688","SJAG_01557","SJAG_04214","SJAG_04163","SJAG_03993","SJAG_04222","SJAG_01433","SJAG_04071","SJAG_01200","SJAG_00639","SJAG_01810","SJAG_01870","SJAG_03460","SJAG_01008","SJAG_04055","SJAG_04529","SJAG_04911","SJAG_00058","SJAG_05235","SJAG_02304","SJAG_00446","SJAG_04898","SJAG_02722","SJAG_01629","SJAG_02469","SJAG_05240","SJAG_02078","SJAG_00563","SJAG_00206","SJAG_00249","SJAG_03601","SJAG_01144","SJAG_00911","SJAG_03983","SJAG_02687","SJAG_00643","SJAG_03301","SJAG_02295","SJAG_03430","SJAG_01301","SJAG_05349","SJAG_04433","SJAG_02558","SJAG_04230","SJAG_00859","SJAG_02396","SJAG_04694","SJAG_01919","SJAG_02317","SJAG_04117","SJAG_00786","SJAG_04318","SJAG_00147","SJAG_05212","SJAG_03070","SJAG_02018","SJAG_03687","SJAG_02862","SJAG_02185","SJAG_01214","SJAG_03427","SJAG_00602","SJAG_05211","SJAG_00571","SJAG_05208","SJAG_03210","SJAG_03245","SJAG_00322","SJAG_01452","SJAG_02879","SJAG_00094","SJAG_02772","SJAG_01308","SJAG_02058","SJAG_01152","SJAG_05224","SJAG_00474","SJAG_00504","SJAG_00564","SJAG_04783","SJAG_02279","SJAG_00989","SJAG_02843","SJAG_01504","SJAG_05025","SJAG_03995","SJAG_04427","SJAG_00225","SJAG_16453","SJAG_01186","SJAG_01315","SJAG_03410","SJAG_00076","SJAG_00577","SJAG_01547","SJAG_04914","SJAG_05009","SJAG_02227","SJAG_00809","SJAG_00414","SJAG_03966","SJAG_02905","SJAG_03547"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58700,72882,74254,83810,85477,85503,85564,86259,87443,87820,88123,88173,88687,88713,89348,90962,91043,91439,91652,92222,92502,92903,93469,93901,94083,94519,95119,96713,96771,98572,98804,99128,100630,100964,101632,101759,101889,101985,102420,102516,102656,103292,103773,104891,104994,105360,105677,105882,106190,106198,106792,107062,107424,107890,107931,108800,109255,110019,111368,111775,112129,113203,113393,114721,114891,115067],"is_not":false,"summary":null,"term":"GO:0005681"},{"annotations":[90958,88789,89073,105356,94514,109025,88381,91380,104366,91215,98801,94080,107928,106187,107886,99122,88707,101978,107852,89402,103769,106193,106757,100598,109251,102873,109612,111084,112569,114008,109321,91645,107421,104988,113052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071013"},{"annotations":[97327,91216,87582,99306,109428,114888,101979,93899,106791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000243"},{"annotations":[89404,92901,88321,94081,102654,100629,111656,113054,91649,104991,90961,96712,101982,101758,107888,111657,104889,102514,106760,112127,95117,101631,91382,91437,115065,84365,98639,98803,106197,94517,92501,107422,94585,105358,103771,92220,91220,100148,85022,113391,83809,106188,109253,84358,103290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071014"},{"annotations":[104992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071020"},{"annotations":[89405,98640,111089,98278,108596,112030,106761,109032,101947,91650,91221,101983,102550,94861,90207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071011"},{"annotations":[92904,96772,101890,91440,113394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071006"},{"annotations":[113395,102517,92905,102657,104892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071007"},{"annotations":[85023,86215,104995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071008"},{"annotations":[110515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071021"},{"annotations":[101747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071005"},{"annotations":[102877,90965,91225,97824,101988,98643,111408,104893,87586,109432,93903,92393,106783,106794,84552,108516,108802,97330,89407,91655,101634,99309,103063,106765,102518,112576,105633,91384,106191,110009,114892,89076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071004"},{"annotations":[115068,84553,92223,103293,107425,99129,111142,99124,85984,99296,100965,93743,98745,83811,91852,101760,100631,110020,114151,96773,100599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005684"}]},"cv_name":"cellular_component","definition":"Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA.","definition_xrefs":["GOC:editors","GOC:mah","PMID:19239890","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":125,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00076":null,"SJAG_00094":null,"SJAG_00147":null,"SJAG_00206":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00363":null,"SJAG_00414":null,"SJAG_00425":null,"SJAG_00446":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00563":null,"SJAG_00564":null,"SJAG_00571":null,"SJAG_00577":null,"SJAG_00597":null,"SJAG_00602":null,"SJAG_00639":null,"SJAG_00643":null,"SJAG_00786":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_00989":null,"SJAG_00998":null,"SJAG_01008":null,"SJAG_01144":null,"SJAG_01152":null,"SJAG_01186":null,"SJAG_01200":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01315":null,"SJAG_01331":null,"SJAG_01408":null,"SJAG_01433":null,"SJAG_01452":null,"SJAG_01504":null,"SJAG_01547":null,"SJAG_01557":null,"SJAG_01629":null,"SJAG_01654":null,"SJAG_01810":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_01919":null,"SJAG_02005":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_02078":null,"SJAG_02185":null,"SJAG_02227":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02308":null,"SJAG_02317":null,"SJAG_02396":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02558":null,"SJAG_02560":null,"SJAG_02686":null,"SJAG_02687":null,"SJAG_02688":null,"SJAG_02722":null,"SJAG_02772":null,"SJAG_02843":null,"SJAG_02844":null,"SJAG_02862":null,"SJAG_02879":null,"SJAG_02905":null,"SJAG_03070":null,"SJAG_03112":null,"SJAG_03210":null,"SJAG_03245":null,"SJAG_03279":null,"SJAG_03301":null,"SJAG_03410":null,"SJAG_03427":null,"SJAG_03430":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03601":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_03966":null,"SJAG_03983":null,"SJAG_03993":null,"SJAG_03995":null,"SJAG_04055":null,"SJAG_04071":null,"SJAG_04117":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04318":null,"SJAG_04385":null,"SJAG_04427":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_04911":null,"SJAG_04914":null,"SJAG_05009":null,"SJAG_05025":null,"SJAG_05208":null,"SJAG_05211":null,"SJAG_05212":null,"SJAG_05224":null,"SJAG_05235":null,"SJAG_05240":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"spliceosomal complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Spliceosome"],"synonyms":[{"name":"spliceosome","type":"broad"},{"name":"spliceosome complex","type":"exact"}],"termid":"GO:0005681","terms_by_termid":{"GO:0000243":null,"GO:0005681":null,"GO:0005684":null,"GO:0071004":null,"GO:0071005":null,"GO:0071006":null,"GO:0071007":null,"GO:0071008":null,"GO:0071011":null,"GO:0071013":null,"GO:0071014":null,"GO:0071020":null,"GO:0071021":null}}


id: GO:0052021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of ethylene in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of ethylene levels in host (obsolete GO:0052021)","synonyms":[{"name":"modulation by organism of ethylene levels in other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052021"}


id: GO:0004140
data:
  {"annotated_genes":["SJAG_05277","SJAG_04288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88244,110998],"is_not":false,"summary":null,"term":"GO:0004140"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-dephospho-CoA + ATP = ADP + CoA + 2 H+.","definition_xrefs":["RHEA:18245","EC:2.7.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04288":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"dephospho-CoA kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-196773","MetaCyc:DEPHOSPHOCOAKIN-RXN","KEGG_REACTION:R00130","Reactome:R-HSA-9837337"],"synonyms":[{"name":"3'-dephospho-CoA kinase activity","type":"related"},{"name":"ATP:dephospho-CoA 3'-phosphotransferase activity","type":"related"},{"name":"dephosphocoenzyme A kinase (phosphorylating)","type":"related"},{"name":"dephosphocoenzyme A kinase activity","type":"related"}],"termid":"GO:0004140","terms_by_termid":{"GO:0004140":null}}


id: PBO:0017836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc4","termid":"PBO:0017836"}


id: GO:0060440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process pertaining to the initial formation of a trachea from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the trachea is recognizable. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"part_of","term_name":"trachea morphogenesis","termid":"GO:0060439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea formation","termid":"GO:0060440"}


id: PBO:0045220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C9","termid":"PBO:0045220"}


id: GO:0030840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate filament polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intermediate filament polymerization","termid":"GO:0030839"},{"relation_name":"is_a","term_name":"negative regulation of protein polymerization","termid":"GO:0032272"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"negatively_regulates","term_name":"intermediate filament polymerization","termid":"GO:0045107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of intermediate filament polymerization","synonyms":[{"name":"down regulation of intermediate filament polymerization","type":"exact"},{"name":"down-regulation of intermediate filament polymerization","type":"exact"},{"name":"downregulation of intermediate filament polymerization","type":"exact"},{"name":"inhibition of intermediate filament polymerization","type":"narrow"},{"name":"negative regulation of intermediate filament polymerization and/or depolymerization","type":"broad"}],"termid":"GO:0030840"}


id: PBO:0083863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fatty acid elongase, involved in sphingolipid biosynthesis; acts on fatty acids of up to 24 carbons in length; mutations have regulatory effects on 1,3-beta-glucan synthase, vacuolar ATPase, and the secretory pathway; ELO2 has a paralog, ELO1, that arose from the whole genome duplication; lethality of the elo2 elo3 double null mutation is functionally complemented by human ELOVL1 and weakly complemented by human ELOVL3 or ELOV7","termid":"PBO:0083863"}


id: PR:Q9USM3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USM3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit sfh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.14","synonyms":[{"name":"RSC complex subunit sfh1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SNF5 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sfh1","type":"exact"}],"termid":"PR:Q9USM3"}


id: GO:0009885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cytokinin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-histidine = ADP + a protein-L-histidine phosphate.","definition_xrefs":["GOC:lr","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor histidine kinase activity","termid":"GO:0009784"},{"relation_name":"is_a","term_name":"cytokinin receptor activity","termid":"GO:0009884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016301","GO:0003674","GO:0003824","GO:0016740","GO:0004672","GO:0038023"],"is_obsolete":false,"name":"transmembrane histidine kinase cytokinin receptor activity","termid":"GO:0009885"}


id: GO:0042307
data:
  {"annotated_genes":["SJAG_03048","SJAG_03453","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86877,90413,98480],"is_not":false,"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein import into nucleus","termid":"GO:0042306"},{"relation_name":"is_a","term_name":"positive regulation of nucleocytoplasmic transport","termid":"GO:0046824"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to nucleus","termid":"GO:1900182"},{"relation_name":"positively_regulates","term_name":"protein import into nucleus","termid":"GO:0006606"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein import into nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein import into nucleus","type":"narrow"},{"name":"positive regulation of protein import into cell nucleus","type":"exact"},{"name":"positive regulation of protein transport from cytoplasm to nucleus","type":"exact"},{"name":"positive regulation of protein-nucleus import","type":"exact"},{"name":"stimulation of protein import into nucleus","type":"narrow"},{"name":"up regulation of protein import into nucleus","type":"exact"},{"name":"up-regulation of protein import into nucleus","type":"exact"},{"name":"upregulation of protein import into nucleus","type":"exact"}],"termid":"GO:0042307","terms_by_termid":{"GO:0042307":null}}


id: PBO:0086321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to hect domain E3 ubiquitin-protein ligases; not essential for viability; found in association with Trf4 in TRAMP complex","termid":"PBO:0086321"}


id: PBO:0059871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 9","termid":"PBO:0059871"}


id: GO:0052757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of hexosaminic linkages in chondroitin, a linear polymer structure composed of the repeating disaccharide unit [->4)-D-glucuronic acid-(1->3)-N-acetyl-D-galactosamine-(1-], also written as [->4GlcUA1->3GalNAc1-].","definition_xrefs":["PMID:18390555","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endogalactosaminidase activity","termid":"GO:0033931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"chondroitin hydrolase activity","synonyms":[{"name":"chondroitin endo-beta-galactosaminidase activity","type":"exact"}],"termid":"GO:0052757"}


id: PBO:0055871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC2 antisense RNA 1","termid":"PBO:0055871"}


id: PBO:0049744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit gamma 2","termid":"PBO:0049744"}


id: PBO:0057337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 523","termid":"PBO:0057337"}


id: PBO:0079769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 pseudogene 2","termid":"PBO:0079769"}


id: GO:0032938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translation in response to oxidative stress","termid":"GO:0043556"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translation in response to oxidative stress","termid":"GO:0032938"}


id: FYPO:0000815
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115656],"is_not":false,"summary":null,"term":"FYPO:0000815"},{"annotations":[115783,115778,115785,115385],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[115682,115689,115555,115556,115386,115681,115563,115688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[115728,115732,115740,115737,115724,115725],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[115650],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear envelope organization is abnormal. 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S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nuclear envelope organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_05207","SJAG_03892","SJAG_03940","SJAG_04284","SJAG_01745","SJAG_01242","SJAG_03891","SJAG_02763","SJAG_03449","SJAG_01906","SJAG_04464"],"single_locus_genotype_uniquenames":["man1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","alx1delta","nem1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","lem2delta","vps32delta","nup61delta","ned1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta"],"synonyms":[{"name":"abnormal nuclear envelope organisation","type":"exact"},{"name":"abnormal nuclear envelope organization during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear envelope organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000815","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0043542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin pseudogene 1","termid":"PBO:0043542"}


id: PBO:0078452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 5","termid":"PBO:0078452"}


id: GO:0003817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of component factor B (Arg-Lys) when in complex with C3b or with cobra venom factor (CVF).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement factor D activity (obsolete GO:0003817)","synonyms":[{"name":"C3 convertase activator activity","type":"related"},{"name":"C3 proactivator convertase activity","type":"related"},{"name":"adipsin","type":"exact"},{"name":"complement factor D activity","type":"exact"},{"name":"factor D","type":"related"},{"name":"factor D (complement)","type":"related"},{"name":"properdin factor D esterase activity","type":"related"}],"termid":"GO:0003817"}


id: PBO:0051427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-6 (pseudogene)","termid":"PBO:0051427"}


id: PBO:0001107
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by temperature","termid":"PBO:0001107"}


id: PBO:0004659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hira protein, histone chaperone Hip1","termid":"PBO:0004659"}


id: GO:0004197
data:
  {"annotated_genes":["SJAG_03292","SJAG_16454","SJAG_00135","SJAG_01283","SJAG_02214","SJAG_03672","SJAG_02542"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87645,112001,113755],"is_not":false,"summary":null,"term":"GO:0004197"},{"annotations":[110101,83477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003923"},{"annotations":[86299,102246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00135":null,"SJAG_01283":null,"SJAG_02214":null,"SJAG_02542":null,"SJAG_03292":null,"SJAG_03672":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008233","GO:0003674","GO:0003824","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"cysteine-type endopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1236948","Reactome:R-HSA-9013895","Reactome:R-HSA-9684336","Reactome:R-HSA-9694601","Reactome:R-HSA-9710101","Reactome:R-HSA-9694377","Reactome:R-HSA-202960","Reactome:R-HSA-201595","Reactome:R-HSA-211651","Reactome:R-HSA-5660663","Reactome:R-HSA-9729741","Reactome:R-HSA-264865","Reactome:R-HSA-351901","Reactome:R-HSA-9647999","Reactome:R-HSA-9684351","EC:3.4.22.-","Reactome:R-HSA-201628","Reactome:R-HSA-211190","Reactome:R-HSA-201631","Reactome:R-HSA-448703","Reactome:R-HSA-114252","Reactome:R-HSA-933532","Reactome:R-HSA-201636","Reactome:R-HSA-9694732","Reactome:R-HSA-201637","Reactome:R-HSA-114261","Reactome:R-HSA-202939","Reactome:R-HSA-351849","Reactome:R-HSA-264871","Reactome:R-HSA-350319","Reactome:R-HSA-2130706","Reactome:R-HSA-351894","Reactome:R-HSA-9603534","Reactome:R-HSA-9647632","Reactome:R-HSA-9684273","Reactome:R-HSA-9694338","Reactome:R-HSA-201608","Reactome:R-HSA-201630","Reactome:R-HSA-5681987","Reactome:R-HSA-9694551","Reactome:R-HSA-3465448","Reactome:R-HSA-9729730","Reactome:R-HSA-2562564","Reactome:R-HSA-212552","Reactome:R-HSA-5682377","Reactome:R-HSA-2130504","Reactome:R-HSA-1678981","Reactome:R-HSA-9684340","Reactome:R-HSA-6814387","Reactome:R-HSA-201629","Reactome:R-HSA-5634228","Reactome:R-HSA-9684352","Reactome:R-HSA-9729704","Reactome:R-HSA-9693929","Reactome:R-HSA-201611","Reactome:R-HSA-350318","Reactome:R-HSA-201639","Reactome:R-HSA-201634","Reactome:R-HSA-351877","Reactome:R-HSA-9684321","Reactome:R-HSA-9694441","Reactome:R-HSA-9012556","Reactome:R-HSA-2028692","Reactome:R-HSA-202966","Reactome:R-HSA-2028697","Reactome:R-HSA-201603","Reactome:R-HSA-201640","Reactome:R-HSA-211186","Reactome:R-HSA-351936","Reactome:R-HSA-352268","Reactome:R-HSA-9694625","Reactome:R-HSA-139952","Reactome:R-HSA-9686088","Reactome:R-HSA-1678920","Reactome:R-HSA-201622","Reactome:R-HSA-202967","Reactome:R-HSA-202969","Reactome:R-HSA-9684309","Reactome:R-HSA-9697750","Reactome:R-HSA-351871","Reactome:R-HSA-9647680","Reactome:R-HSA-2130336","Reactome:R-HSA-5357828","Reactome:R-HSA-9686930","Reactome:R-HSA-114259","Reactome:R-HSA-350651","Reactome:R-HSA-202917","Reactome:R-HSA-418845","Reactome:R-HSA-202947","Reactome:R-HSA-2130349","Reactome:R-HSA-350158","Reactome:R-HSA-139898","Reactome:R-HSA-418846","Reactome:R-HSA-418852","Reactome:R-HSA-351913","Reactome:R-HSA-351876"],"synonyms":[{"name":"caspase activity","type":"narrow"},{"name":"lysosomal cysteine-type endopeptidase","type":"narrow"},{"name":"metacaspase activity","type":"narrow"},{"name":"thiol endopeptidase activity","type":"exact"}],"termid":"GO:0004197","terms_by_termid":{"GO:0003923":null,"GO:0004197":null,"GO:0070139":null}}


id: PBO:0049526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AZ1 divergent transcript","termid":"PBO:0049526"}


id: PBO:0048735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 6","termid":"PBO:0048735"}


id: PBO:0046394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1 like 1","termid":"PBO:0046394"}


id: PBO:0054430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1826","termid":"PBO:0054430"}


id: PBO:0026727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_kinetochore_during_mitosis","termid":"PBO:0026727"}


id: GO:0017030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stabilization of the structure of beta-galactosidase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-galactosidase stabilization activity (obsolete GO:0017030)","synonyms":[{"name":"beta-galactosidase stabilization activity","type":"exact"}],"termid":"GO:0017030"}


id: PBO:0069894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1184, pseudogene","termid":"PBO:0069894"}


id: PBO:0052940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 24-1","termid":"PBO:0052940"}


id: PBO:0053502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 485","termid":"PBO:0053502"}


id: GO:1903298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hypoxia-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:bf","PMID:24553947","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to hypoxia","termid":"GO:1900038"},{"relation_name":"is_a","term_name":"regulation of hypoxia-induced intrinsic apoptotic signaling pathway","termid":"GO:1903297"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to hypoxia","type":"narrow"},{"name":"negative regulation of hypoxia-induced apoptosis","type":"related"},{"name":"negative regulation of hypoxic stress-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"},{"name":"protection against hypoxia-induced apoptosis","type":"related"}],"termid":"GO:1903298"}


id: MOD:01625
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to 1-thioglycine.","definition_xrefs":["PubMed:11463785","PubMed:9367957","RESID:AA0265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur substitution for oxygen","termid":"MOD:00749"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-thioglycine","synonyms":[{"name":"1-thioglycine","type":"exact"},{"name":"2-amino-1-sulfanylethanone","type":"exact"},{"name":"Carboxy->Thiocarboxy","type":"related"},{"name":"MOD_RES 1-thioglycine","type":"exact"},{"name":"S(O)Gly","type":"exact"},{"name":"aminoethanethioic acid","type":"exact"},{"name":"aminothioacetic acid","type":"exact"},{"name":"thiocarboxylic acid","type":"related"}],"termid":"MOD:01625"}


id: GO:0034367
data:
  {"annotated_genes":["SJAG_00116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001113"}]},"cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a complex, resulting in the alteration of an existing complex.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:mtg_mpo","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00116":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-containing complex remodeling","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"macromolecular complex remodeling","type":"related"},{"name":"macromolecular complex remodelling","type":"related"},{"name":"protein-containing complex remodelling","type":"exact"}],"termid":"GO:0034367","terms_by_termid":{"GO:0001113":null}}


id: FYPO:0001062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutamine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutamine import","termid":"FYPO:0001061"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased glutamine import","synonyms":[{"name":"decreased L-glutamine import","type":"narrow"},{"name":"decreased glutamine import across plasma membrane","type":"exact"},{"name":"decreased glutamine import during mitotic cell cycle","type":"related"},{"name":"decreased glutamine import during vegetative growth","type":"exact"},{"name":"decreased glutamine import into cell","type":"exact"},{"name":"decreased glutamine uptake","type":"exact"},{"name":"reduced glutamine import","type":"exact"}],"termid":"FYPO:0001062"}


id: PBO:0092002
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is located in the silent mating type region mat2 and is therefore not expressed. It is only transcribed when at the mat1 locus, which is the mating type configuration of h+ cells. The S. pombe reference strain is h- mating type and express h- specific mating genes from the mat1 locus. The silenced mat2 genes are therefore annotated with mat1 h+ specific information","termid":"PBO:0092002"}


id: GO:0031037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament disassembly","termid":"GO:0031035"},{"relation_name":"is_a","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"myosin II filament disassembly","synonyms":[{"name":"myosin II depolymerization","type":"related"}],"termid":"GO:0031037"}


id: GO:0042838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-glucarate, the D-enantiomer of glucarate.","definition_xrefs":["ISBN:0198506732","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"glucarate catabolic process","termid":"GO:0019394"},{"relation_name":"is_a","term_name":"D-glucarate metabolic process","termid":"GO:0042836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"D-glucarate catabolic process","synonyms":[{"name":"D-glucarate breakdown","type":"exact"},{"name":"D-glucarate catabolism","type":"exact"},{"name":"D-glucarate degradation","type":"exact"},{"name":"saccharate catabolic process","type":"exact"},{"name":"saccharate catabolism","type":"exact"}],"termid":"GO:0042838"}


id: GO:0052086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont interferes with, inhibits or disrupts the normal execution of the B-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host adaptive immune response","termid":"GO:0039504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host B-cell mediated immune response","secondary_identifiers":["GO:0052281"],"synonyms":[{"name":"down regulation by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"down-regulation by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"downregulation by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"inhibition by symbiont of host B-cell mediated immune response","type":"narrow"},{"name":"negative regulation by organism of B-cell mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"suppression by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"suppression of host B-cell mediated immune response","type":"exact"}],"termid":"GO:0052086"}


id: PBO:0002719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit, Anp family Mnn9 (predicted)","termid":"PBO:0002719"}


id: PBO:0005579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone Cia1","termid":"PBO:0005579"}


id: PBO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication checkpoint protein Drc1","termid":"PBO:0001547"}


id: GO:0061475
data:
  {"annotated_genes":["SJAG_00443"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100781],"is_not":false,"summary":null,"term":"GO:0061475"}]},"cv_name":"biological_process","definition":"The process of coupling valine to valyl-tRNA in the cytosol, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valyl-tRNA aminoacylation","termid":"GO:0006438"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00443":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"cytosolic valyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061475","terms_by_termid":{"GO:0061475":null}}


id: PBO:0069179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 433, pseudogene","termid":"PBO:0069179"}


id: PBO:0082145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA-binding protein; transports newly synthesized acyl-CoA esters from fatty acid synthetase (Fas1p-Fas2p) to acyl-CoA-consuming processes; subject to starvation-induced, Grh1p-mediated unconventional secretion; protein abundance increases in response to DNA replication stress","termid":"PBO:0082145"}


id: GO:0050697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + trichloroethene = (Z)-1,2-dichloroethene + A + chloride + H+.","definition_xrefs":["RHEA:67992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"trichloroethene reductive dehalogenase activity","secondary_identifiers":["UM-BBD_enzymeID:r0350","UM-BBD_enzymeID:r0932","MetaCyc:TCEREDCHLOR-RXN"],"synonyms":[{"name":"1,1,2-trichloroethene reductive dehalogenase activity","type":"exact"},{"name":"1,1,2-trichloroethylene reductive dehalogenase activity","type":"exact"},{"name":"TCE-reductive dehalogenase activity","type":"exact"}],"termid":"GO:0050697"}


id: FYPO:0000897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0000266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial fission","synonyms":[{"name":"normal mitochondrial division","type":"exact"},{"name":"normal mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial fission during vegetative growth","type":"exact"},{"name":"normal mitochondrial proliferation","type":"related"}],"termid":"FYPO:0000897"}


id: PR:O60167
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yap18 gene.","definition_xrefs":["UniProtKB:O60167","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH domain-containing protein C19F8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.03c","synonyms":[{"name":"Spom972h-yap18","type":"exact"}],"termid":"PR:O60167"}


id: PBO:0085328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate; forms membrane-associated signal transduction complex with Vps15p to regulate protein sorting; activated by the GTP-bound form of Gpa1p; a fraction is localized, with Vps15p, to nuclear pores at nucleus-vacuole junctions and may facilitate transcription elongation for genes positioned at the nuclear periphery","termid":"PBO:0085328"}


id: MOD:01445
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-3,3-dihydroxyoalanine.","definition_xrefs":["PubMed:17558559","RESID:AA0492#SER","PubMed:11435113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"L-3,3-dihydroxyoalanine","termid":"MOD:01448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3,3-dihydroxyoalanine (Ser)","synonyms":[{"name":"(S)-2-amino-3,3-dihydroxypropanoic acid","type":"exact"},{"name":"2-(dihydroxymethyl)glycine","type":"exact"},{"name":"3,3-dihydroxy-L-alanine","type":"exact"},{"name":"3,3-dihydroxyalanine","type":"exact"},{"name":"3-hydroxy-L-serine","type":"exact"},{"name":"3-oxoalanine hydrate","type":"exact"},{"name":"C(alpha)-formylglycine hydrate","type":"related"}],"termid":"MOD:01445"}


id: GO:0034616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a laminar fluid shear stress stimulus. Laminar fluid flow is the force acting on an object in a system where the fluid is moving across a solid surface in parallel layers. As an example, laminar shear stress can be seen where blood flows against the luminal side of blood vessel walls.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fluid shear stress","termid":"GO:0034405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to laminar fluid shear stress","termid":"GO:0034616"}


id: GO:0050020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinonate = 2-dehydro-3-deoxy-L-arabinonate + H2O.","definition_xrefs":["EC:4.2.1.25","RHEA:20968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-arabinonate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02522","MetaCyc:L-ARABINONATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"L-arabinonate hydro-lyase (2-dehydro-3-deoxy-L-arabinonate-forming)","type":"related"},{"name":"L-arabinonate hydro-lyase activity","type":"related"},{"name":"L-arabonate dehydrase activity","type":"related"},{"name":"L-arabonate dehydratase activity","type":"related"}],"termid":"GO:0050020"}


id: GO:1900574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emodin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"emodin metabolic process","termid":"GO:1900573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"emodin catabolic process","synonyms":[{"name":"emodin breakdown","type":"exact"},{"name":"emodin catabolism","type":"exact"},{"name":"emodin degradation","type":"exact"}],"termid":"GO:1900574"}


id: PBO:0049479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.3 linker histone, cluster member","termid":"PBO:0049479"}


id: PBO:0005664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase Gut2 (predicted)","termid":"PBO:0005664"}


id: PBO:0006198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_modification","termid":"PBO:0006198"}


id: PBO:0086990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of translation initiation; binds eIF4G through its RGG domain and inhibits recruitment of the preinitiation complex; also contains an Lsm domain; may have a role in RNA processing; overproduction suppresses null mutation in clathrin heavy chain gene CHC1; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0086990"}


id: PATO:0001450
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of extracellular fluid.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edematous","synonyms":[{"name":"edema","type":"narrow"},{"name":"edemic","type":"exact"},{"name":"oedema","type":"narrow"},{"name":"oedematous","type":"exact"},{"name":"oedemic","type":"exact"}],"termid":"PATO:0001450"}


id: PBO:0073332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 7 pseudogene 1","termid":"PBO:0073332"}


id: PBO:0060642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 4 pseudogene 1","termid":"PBO:0060642"}


id: PBO:0087800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored ER membrane protein of unknown function; interacts with homolog Frt1p; promotes growth in conditions of high Na+, alkaline pH, or cell wall stress, possibly via a role in posttranslational translocation; potential Cdc28p substrate; FRT2 has a paralog, FRT1, that arose from the whole genome duplication","termid":"PBO:0087800"}


id: PBO:0059857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methenyltetrahydrofolate synthetase domain containing","termid":"PBO:0059857"}


id: GO:0043087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate of GTP hydrolysis by a GTPase.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of GTPase activity","secondary_identifiers":["GO:0032312","GO:0032315","GO:0032317","GO:0032313","GO:0032318","GO:0032319","GO:0032314","GO:0032316","GO:0043088"],"synonyms":[{"name":"regulation of ARF GTPase activity","type":"narrow"},{"name":"regulation of Cdc42 GTPase activity","type":"narrow"},{"name":"regulation of Rab GTPase activity","type":"narrow"},{"name":"regulation of Rac GTPase activity","type":"narrow"},{"name":"regulation of Ral GTPase activity","type":"narrow"},{"name":"regulation of Ran GTPase activity","type":"narrow"},{"name":"regulation of Rap GTPase activity","type":"narrow"},{"name":"regulation of Ras GTPase activity","type":"narrow"},{"name":"regulation of Rho GTPase activity","type":"narrow"}],"termid":"GO:0043087"}


id: PBO:0061030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninjurin 1","termid":"PBO:0061030"}


id: PBO:0079764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFD1 antisense RNA 1","termid":"PBO:0079764"}


id: PBO:0056435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 8","termid":"PBO:0056435"}


id: PBO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP pseudouridylase box H/ACA snoRNP complex protein (predicted)","termid":"PBO:0001081"}


id: FYECO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that describes a defined growth medium, i.e. one in which all constituent substances and their concentrations are known.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping defined medium","termid":"FYECO:0000013"}


id: PBO:0066192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM12B antisense RNA 1","termid":"PBO:0066192"}


id: PBO:0113121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-resident glycoprotein involved in high-pressure tolerance; proposed role promoting proper folding of nutrient permeases in the ER during hydrostatic pressure stress; contains two transmembrane domains, a C-terminal cytoplasmic domain and a luminal region containing 12 N-linked glycans; null mutant is synthetically sick with cdc13-1; SWAT-GFP and mCherry fusion proteins localize to the vacuole while SWAT-GFP fusion also localizes to the endoplasmic reticulum","termid":"PBO:0113121"}


id: GO:0001939
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pronucleus originating from the ovum that is being fertilized.","definition_xrefs":["ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronucleus","termid":"GO:0045120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"female pronucleus","termid":"GO:0001939"}


id: PBO:0039888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 5","termid":"PBO:0039888"}


id: PBO:0088749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc1","termid":"PBO:0088749"}


id: PBO:0051296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-27 (pseudogene)","termid":"PBO:0051296"}


id: FYPO:0005261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on galactose carbon source","synonyms":[{"name":"increased growth on galactose carbon source","type":"broad"},{"name":"increased vegetative cell growth on galactose carbon source","type":"exact"}],"termid":"FYPO:0005261"}


id: PBO:0088953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane adaptor for ubiquitin ligase Rcr1","termid":"PBO:0088953"}


id: FYPO:0004528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial translation phenotype","termid":"FYPO:0000632"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitochondrial translation","synonyms":[{"name":"abnormal mitochondrial protein biosynthesis","type":"exact"},{"name":"abnormal mitochondrial protein synthesis","type":"exact"},{"name":"abnormal mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial translation during vegetative growth","type":"exact"}],"termid":"FYPO:0004528"}


id: PBO:0064808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2","termid":"PBO:0064808"}


id: PBO:0059564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1H","termid":"PBO:0059564"}


id: PBO:0059160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin phosphatase Rho interacting protein","termid":"PBO:0059160"}


id: GO:0007229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to an integrin on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"integrin-mediated signaling pathway","synonyms":[{"name":"integrin-mediated signalling pathway","type":"exact"}],"termid":"GO:0007229"}


id: PR:Q9Y7L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC685.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7L5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C685.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.03","synonyms":[{"name":"Spom972h-SPBC685.03","type":"exact"}],"termid":"PR:Q9Y7L5"}


id: GO:0043247
data:
  {"annotated_genes":["SJAG_01777","SJAG_03092"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101218,85798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031848"}]},"cv_name":"biological_process","definition":"Any process that occur in response to the presence of critically short or damaged telomeres.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","PMID:15279784","GOC:jbu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"},{"relation_name":"is_a","term_name":"DNA damage response","termid":"GO:0006974"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01777":null,"SJAG_03092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"telomere maintenance in response to DNA damage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage response, telomere maintenance","type":"exact"}],"termid":"GO:0043247","terms_by_termid":{"GO:0031848":null}}


id: PBO:0030440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_modification","termid":"PBO:0030440"}


id: GO:0140192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of an adenylate cyclase-activating adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process (obsolete GO:0140192)","termid":"GO:0140192"}


id: FYPO:0003491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ultraviolet light during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to UV during vegetative growth","termid":"FYPO:0000268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to UV during mitotic G1 phase","synonyms":[{"name":"decreased growth during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"hypersensitive to UV during mitotic G1 phase","type":"exact"},{"name":"increased sensitivity to UV irradiation during mitotic G1 phase","type":"exact"},{"name":"sensitive to UV during G1 phase during vegetative growth","type":"exact"},{"name":"sensitive to UV during G1 phase of mitotic cell cycle","type":"exact"},{"name":"sensitive to ultraviolet light during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0003491"}


id: SO:0000624
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A specific structure at the end of a linear chromosome, required for the integrity and maintenance of the end.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere","secondary_identifiers":["http://en.wikipedia.org/wiki/Telomere"],"synonyms":[{"name":"INSDC_feature:telomere","type":"exact"},{"name":"telomeric DNA","type":"exact"},{"name":"telomeric sequence","type":"exact"}],"termid":"SO:0000624"}


id: PBO:0082994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic L-asparaginase, involved in asparagine catabolism; catalyzes hydrolysis of L-asparagine to aspartic acid and ammonia; important enzyme for the treatment of acute lymphoblastic leukemia; has low glutaminase activity and dependence; synthesized constitutively","termid":"PBO:0082994"}


id: PBO:0053856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1126","termid":"PBO:0053856"}


id: PBO:0047122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM167A antisense RNA 1","termid":"PBO:0047122"}


id: PBO:0059589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 1","termid":"PBO:0059589"}


id: PBO:0038705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin epsilon 1, pseudogene","termid":"PBO:0038705"}


id: PBO:0052213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel regulator","termid":"PBO:0052213"}


id: GO:0005761
data:
  {"annotated_genes":["SJAG_03636","SJAG_02201","SJAG_02067","SJAG_05244","SJAG_04164","SJAG_04788","SJAG_02071","SJAG_05218","SJAG_00105","SJAG_00628","SJAG_02777","SJAG_01727","SJAG_01630","SJAG_03053","SJAG_04490","SJAG_01520","SJAG_03192","SJAG_01413","SJAG_01473","SJAG_03284","SJAG_02643","SJAG_03459","SJAG_00513","SJAG_00799","SJAG_02359","SJAG_00860","SJAG_06110","SJAG_04893","SJAG_03040","SJAG_03297","SJAG_05221","SJAG_00889","SJAG_03649","SJAG_02836","SJAG_02452","SJAG_01468","SJAG_00148","SJAG_00086","SJAG_03176","SJAG_01591","SJAG_04918","SJAG_01767","SJAG_04753","SJAG_04207","SJAG_00497","SJAG_03065","SJAG_04019","SJAG_00315","SJAG_04493","SJAG_00844","SJAG_04889","SJAG_01719","SJAG_03584","SJAG_01734","SJAG_04173","SJAG_00944","SJAG_04378","SJAG_01478","SJAG_01045","SJAG_05573","SJAG_00060","SJAG_03402","SJAG_04689","SJAG_04494","SJAG_00782","SJAG_01829","SJAG_01303","SJAG_04216","SJAG_04281","SJAG_04244","SJAG_01463","SJAG_05270","SJAG_06253","SJAG_05320","SJAG_07009","SJAG_02324","SJAG_02762"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109603,94032,102869,94053,95175,92962,110468,113289,85056,101820,110866,87487,99545,94727,105973,99436,99799,108869,92658,98018,108371,111531,92319,100973,111578,84387,111398,107240,108609,104209,104309,100478,110746,112323,85506,98713,104356,112435,113175,106913,92280,109045,97177,101967,114097],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005762"},{"annotations":[104213,114250,94294,104469,106805,106269,104068,99185,85961,108509,104715,111751,100119,102144,89691,112180,90232,85908,100049,94057,105489,90517,88100,92692,106517,98405,99464,90531,94056,91977,102508,91393],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar ribosome","termid":"GO:0000313"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00086":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00315":null,"SJAG_00497":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01045":null,"SJAG_01303":null,"SJAG_01413":null,"SJAG_01463":null,"SJAG_01468":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01520":null,"SJAG_01591":null,"SJAG_01630":null,"SJAG_01719":null,"SJAG_01727":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_01829":null,"SJAG_02067":null,"SJAG_02071":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02762":null,"SJAG_02777":null,"SJAG_02836":null,"SJAG_03040":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03402":null,"SJAG_03459":null,"SJAG_03584":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_04019":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04494":null,"SJAG_04689":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_04918":null,"SJAG_05218":null,"SJAG_05221":null,"SJAG_05244":null,"SJAG_05270":null,"SJAG_05320":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_07009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial ribosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"55S ribosome, mitochondrial","type":"narrow"}],"termid":"GO:0005761","terms_by_termid":{"GO:0005762":null,"GO:0005763":null}}


id: PBO:0059442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A13","termid":"PBO:0059442"}


id: FYPO:0002067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population grows more slowly than normal when the population has been in stationary phase and is then placed in conditions that allow recovery.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"slow vegetative cell population growth","termid":"FYPO:0001234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002058","FYPO:0005447","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"slow cell population growth during recovery from stationary phase","termid":"FYPO:0002067"}


id: SO:0000253
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Transfer RNA (tRNA) molecules are approximately 80 nucleotides in length. Their secondary structure includes four short double-helical elements and three loops (D, anti-codon, and T loops). Further hydrogen bonds mediate the characteristic L-shaped molecular structure. Transfer RNAs have two regions of fundamental functional importance: the anti-codon, which is responsible for specific mRNA codon recognition, and the 3' end, to which the tRNA's corresponding amino acid is attached (by aminoacyl-tRNA synthetases). Transfer RNAs cope with the degeneracy of the genetic code in two manners: having more than one tRNA (with a specific anti-codon) for a particular amino acid; and 'wobble' base-pairing, i.e. permitting non-standard base-pairing at the 3rd anti-codon position.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tRNA_primary_transcript","termid":"SO:0000210"},{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/TRNA"],"synonyms":[{"name":"INSDC_feature:tRNA","type":"exact"},{"name":"INSDC_qualifier:unknown","type":"broad"},{"name":"transfer RNA","type":"related"},{"name":"transfer ribonucleic acid","type":"related"}],"termid":"SO:0000253"}


id: GO:0072125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"negative regulation of cell proliferation involved in kidney development","termid":"GO:1901723"},{"relation_name":"negatively_regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glomerular mesangial cell proliferation","termid":"GO:0072125"}


id: GO:1900552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving asperfuranone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"asperfuranone metabolic process","synonyms":[{"name":"asperfuranone metabolism","type":"exact"}],"termid":"GO:1900552"}


id: PBO:0045764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA hydratase, short chain 1","termid":"PBO:0045764"}


id: PBO:0044454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 33, pseudogene","termid":"PBO:0044454"}


id: GO:0042118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an endothelial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:mgi_curators","PMID:14581484","ISBN:0781735149","PMID:12851652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell activation","termid":"GO:0042118"}


id: PBO:0048108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-fucosidase 1","termid":"PBO:0048108"}


id: PBO:0050292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocyte nuclear factor 4 gamma","termid":"PBO:0050292"}


id: GO:0002693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cellular extravasation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"positively_regulates","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular extravasation","synonyms":[{"name":"activation of cellular extravasation","type":"narrow"},{"name":"stimulation of cellular extravasation","type":"narrow"},{"name":"up regulation of cellular extravasation","type":"exact"},{"name":"up-regulation of cellular extravasation","type":"exact"},{"name":"upregulation of cellular extravasation","type":"exact"}],"termid":"GO:0002693"}


id: GO:0051434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH3 protein domain, present in Bcl-2 family members. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death.","definition_xrefs":["PMID:12133724","PMID:9020082","PMID:11048732","PMID:9704409","Prosite:PS01259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"},{"relation_name":"is_a","term_name":"death domain binding","termid":"GO:0070513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"BH3 domain binding","termid":"GO:0051434"}


id: PBO:0018236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid4 (predicted)","termid":"PBO:0018236"}


id: GO:2000852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of corticosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"regulates","term_name":"corticosterone secretion","termid":"GO:0035934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of corticosterone secretion","termid":"GO:2000852"}


id: PBO:0083466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NAP1","termid":"PBO:0083466"}


id: PBO:0029332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation","termid":"PBO:0029332"}


id: PBO:0057557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 675","termid":"PBO:0057557"}


id: PBO:0028464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitotic_interphase","termid":"PBO:0028464"}


id: GO:1904148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonylphenol stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:19260726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to nonylphenol","termid":"GO:1904147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nonylphenol","termid":"GO:1904148"}


id: GO:0003790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete actin modulating activity (obsolete GO:0003790)","synonyms":[{"name":"actin modulating activity","type":"exact"}],"termid":"GO:0003790"}


id: PBO:0068869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 109, pseudogene","termid":"PBO:0068869"}


id: GO:0010755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plasminogen activation. Plasminogen activation is the process in which plasminogen is processed to plasmin.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"plasminogen activation","termid":"GO:0031639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of plasminogen activation","termid":"GO:0010755"}


id: PBO:0057355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548a-3","termid":"PBO:0057355"}


id: PBO:0073643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 30, pseudogene","termid":"PBO:0073643"}


id: PR:Q09694
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase [NAD(+), L-lysine-forming] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.18","synonyms":[{"name":"SDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys3","type":"exact"},{"name":"lysine--2-oxoglutarate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09694"}


id: GO:0042679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a compound eye cone cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"compound eye cone cell fate commitment","termid":"GO:0042676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye cone cell fate specification","secondary_identifiers":["GO:0042678"],"termid":"GO:0042679"}


id: PBO:0038329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_exposure_receptor","termid":"PBO:0038329"}


id: PBO:0089043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and transfer glutaredoxin Grx5","termid":"PBO:0089043"}


id: PBO:0091166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial succinate dehydrogenase assembly factor, LYR family Sdh6","termid":"PBO:0091166"}


id: SO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A multi-chromosome aberration generated by reassortment of other aberration components; presumed to have a deficiency or a duplication.","definition_xrefs":["FB:gm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assortment_derived_variation","termid":"SO:0001504"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_aneuploid","synonyms":[{"name":"assortment derived aneuploid","type":"exact"}],"termid":"SO:0000803"}


id: GO:0018573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-aminophenol + O2 = 2-aminomuconic semialdehyde.","definition_xrefs":["UM-BBD_reactionID:r0305"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-aminophenol 1,6-dioxygenase activity (obsolete GO:0018573)","termid":"GO:0018573"}


id: PBO:0054411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1807","termid":"PBO:0054411"}


id: PATO:0001594
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's forming or resembling an arch.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave","termid":"PATO:0001857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arched","termid":"PATO:0001594"}


id: GO:0006422
data:
  {"annotated_genes":["SJAG_04094","SJAG_01197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110206],"is_not":false,"summary":null,"term":"GO:0006422"},{"annotations":[114226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"}]},"cv_name":"biological_process","definition":"The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. The aspartyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of an aspartic acid accetping tRNA.","definition_xrefs":["GOC:mah","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01197":null,"SJAG_04094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"aspartyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006422","terms_by_termid":{"GO:0006422":null,"GO:0070146":null}}


id: PBO:0063582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo ribosomal biogenesis factor 1 pseudogene 2","termid":"PBO:0063582"}


id: GO:0070834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with two N-methylations with phospho-base phosphoethanolamine and phospho-N-methylethanolamine, followed by a downstream N-methylation on phosphatidyl-base phosphatidyl-N-dimethylethanolamine; the process ends with the conversion of a phosphatidyl-N-dimethylethanolamine to a phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY4FS-4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via N-dimethylethanolamine phosphate and CDP-N-dimethylethanolamine","termid":"GO:0070834"}


id: GO:0004581
data:
  {"annotated_genes":["SJAG_00394"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107228],"is_not":false,"summary":null,"term":"GO:0004581"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + dolichyl phosphate = UDP + dolichyl beta-D-glucosyl phosphate.","definition_xrefs":["EC:2.4.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.4.1.117-RXN","RHEA:15401","Reactome:R-HSA-446214"],"synonyms":[{"name":"UDP-glucose dolichyl-phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichol phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolicholphosphoryl glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl monophosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl-phosphate beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:dolichyl-phosphate beta-D-glucosyltransferase activity","type":"related"},{"name":"polyprenyl phosphate:UDP-D-glucose glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-dolichol glucosyltransferase activity","type":"related"}],"termid":"GO:0004581","terms_by_termid":{"GO:0004581":null}}


id: PBO:0077777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM40 pseudogene 4","termid":"PBO:0077777"}


id: GO:0004106
data:
  {"annotated_genes":["SJAG_00518"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85869],"is_not":false,"summary":null,"term":"GO:0004106"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate = prephenate.","definition_xrefs":["EC:5.4.99.5","RHEA:13897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00518":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"chorismate mutase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CHORISMATEMUT-RXN","KEGG_REACTION:R01715"],"synonyms":[{"name":"chorismate pyruvatemutase activity","type":"related"},{"name":"hydroxyphenylpyruvate synthase activity","type":"broad"}],"termid":"GO:0004106","terms_by_termid":{"GO:0004106":null}}


id: PBO:0038518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCF2-H2BK1 readthrough","termid":"PBO:0038518"}


id: PBO:0039996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL8B pseudogene 2","termid":"PBO:0039996"}


id: GO:0033939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-D-(1->2)-(4-O-methyl)glucuronosyl links in the main chain of hardwood xylans.","definition_xrefs":["EC:3.2.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"xylan alpha-1,2-glucuronosidase activity","secondary_identifiers":["MetaCyc:3.2.1.131-RXN"],"synonyms":[{"name":"1,2-alpha-glucuronidase activity","type":"related"},{"name":"alpha-(1->2)-glucuronidase activity","type":"related"},{"name":"xylan alpha-D-1,2-(4-O-methyl)glucuronohydrolase activity","type":"related"}],"termid":"GO:0033939"}


id: PBO:0045947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Tu GTP binding domain containing 2","termid":"PBO:0045947"}


id: PBO:0056753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 4","termid":"PBO:0056753"}


id: GO:0017038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The targeting and directed movement of proteins into a cell or organelle. Not all import involves an initial targeting event.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein import","synonyms":[{"name":"protein uptake","type":"exact"}],"termid":"GO:0017038"}


id: PBO:0033805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomeric_3'_overhang_length","termid":"PBO:0033805"}


id: PBO:0028875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_poly(A)_RNA_binding","termid":"PBO:0028875"}


id: PBO:0002189
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked spondyloepiphyseal dysplasia tarda","termid":"PBO:0002189"}


id: PBO:0050011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase 3","termid":"PBO:0050011"}


id: PR:Q9P7I8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.18 gene.","definition_xrefs":["UniProtKB:Q9P7I8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0390 protein C24B10.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.18","synonyms":[{"name":"Spom972h-SPCC24B10.18","type":"exact"}],"termid":"PR:Q9P7I8"}


id: PBO:0041303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2CD5 antisense RNA 1","termid":"PBO:0041303"}


id: PBO:0091373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chalcone-related heme binding protein, Aim18","termid":"PBO:0091373"}


id: FYPO:0003124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is abnormal. Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["PomBase:mah","GO:0002183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cytoplasmic translation","synonyms":[{"name":"abnormal cytoplasmic protein biosynthesis","type":"exact"},{"name":"abnormal cytoplasmic protein synthesis","type":"exact"},{"name":"abnormal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"abnormal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0003124"}


id: PBO:0078480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 4-1","termid":"PBO:0078480"}


id: GO:0102102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-aminobutyric acid + L-histidine + ATP = H+ + homocarnosine + ADP + hydrogenphosphate.","definition_xrefs":["RHEA:59568","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"homocarnosine synthase activity","secondary_identifiers":["EC:6.3.2.11","MetaCyc:RXN-11222"],"termid":"GO:0102102"}


id: GO:1990650
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104429],"is_not":false,"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2,4,5,6-tetrakisphosphate + H2O = 1D-myo-inositol 2,4,6-trisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-2,4,5,6-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990650","terms_by_termid":{"GO:1990650":null}}


id: GO:0008449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 6-sulfate group of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate.","definition_xrefs":["EC:3.1.6.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N-acetylglucosamine-6-sulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.14-RXN","Reactome:R-HSA-2263495","Reactome:R-HSA-1638032"],"synonyms":[{"name":"2-acetamido-2-deoxy-D-glucose 6-sulfate sulfatase activity","type":"related"},{"name":"N-acetyl-D-glucosamine-6-sulfate 6-sulfohydrolase activity","type":"related"},{"name":"N-acetylglucosamine 6-sulfate sulfatase activity","type":"related"},{"name":"N-acetylglucosamine-6-sulphatase activity","type":"exact"},{"name":"O,N-disulfate O-sulfohydrolase activity","type":"related"},{"name":"acetylglucosamine 6-sulfatase activity","type":"related"},{"name":"chondroitinsulfatase","type":"broad"},{"name":"glucosamine-6-sulfatase activity","type":"related"}],"termid":"GO:0008449"}


id: GO:2000716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034183"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:2000715"},{"relation_name":"negatively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:0071959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"negative regulation of maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:2000716"}


id: PBO:0056737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl aminopeptidase 1","termid":"PBO:0056737"}


id: PBO:0084879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosome-associated protein; regulates mitochondrial DNA copy number and the size and distribution of mtDNA nucleoids; subunit of a complex containing Pet20p, Mam33p, and Pim1p that may regulate mtDNA replication; member of the PET20 domain-containing protein family; forms foci that partially co-localize with mtDNA","termid":"PBO:0084879"}


id: PBO:0028569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleotide-excision_repair_during_cellular_response_to_UV","termid":"PBO:0028569"}


id: PBO:0002403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-sugar phosphatase (predicted)","termid":"PBO:0002403"}


id: GO:0047366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin 3-sulfate = adenosine 3',5'-diphosphate + H+ + quercetin 3,4'-disulfate.","definition_xrefs":["RHEA:17205","EC:2.8.2.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"quercetin-3-sulfate 4'-sulfotransferase activity","secondary_identifiers":["MetaCyc:2.8.2.27-RXN","KEGG_REACTION:R02633"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3-sulfate 4'-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3-sulfate 4'-sulfotransferase activity","type":"related"},{"name":"flavonol 4'-sulfotransferase activity","type":"related"},{"name":"quercetin-3-sulphate 4'-sulphotransferase activity","type":"exact"}],"termid":"GO:0047366"}


id: PBO:0034421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_morphogenesis_of","termid":"PBO:0034421"}


id: GO:0048315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing non-motile spores, called conidia, via mitotic asexual reproduction in higher fungi. Conidia are haploid cells genetically identical to their haploid parent. They are produced by conversion of hyphal elements, or are borne on sporogenous cells on or within specialized structures termed conidiophores, and participate in dispersal of the fungus.","definition_xrefs":["PMID:2524423","GOC:di","PMID:9529886","ISBN:0963117211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"},{"relation_name":"part_of","term_name":"conidium development","termid":"GO:0061794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conidium formation","synonyms":[{"name":"conidia biosynthesis","type":"related"},{"name":"conidia formation","type":"exact"}],"termid":"GO:0048315"}


id: PBO:0049788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 23","termid":"PBO:0049788"}


id: PBO:0027893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_unseparated_DNA_and_centromeric_DNA_dissociated_from_spindle","termid":"PBO:0027893"}


id: PBO:0016053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, Prp19 complex subunit Cdc5","termid":"PBO:0016053"}


id: PR:G2TRN7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRN7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ DNA helicase-like protein C212.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.06c","synonyms":[{"name":"Spom972h-SPAC212.06c","type":"exact"}],"termid":"PR:G2TRN7"}


id: GO:1904570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine incorporation.","definition_xrefs":["GOC:TermGenie","PMID:21685449","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"regulation of selenocysteine incorporation","termid":"GO:1904569"},{"relation_name":"negatively_regulates","term_name":"selenocysteine incorporation","termid":"GO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of selenocysteine incorporation","synonyms":[{"name":"down regulation of selenocysteine incorporation","type":"exact"},{"name":"down-regulation of selenocysteine incorporation","type":"exact"},{"name":"downregulation of selenocysteine incorporation","type":"exact"},{"name":"inhibition of selenocysteine incorporation","type":"narrow"}],"termid":"GO:1904570"}


id: GO:0003396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite in a neuron of the amphid sensory organ.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in dendrite retrograde extension","termid":"GO:0003394"},{"relation_name":"part_of","term_name":"amphid sensory organ dendrite retrograde extension","termid":"GO:0003391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in amphid sensory organ dendrite retrograde extension","termid":"GO:0003396"}


id: GO:0048324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"axial mesodermal cell fate determination","termid":"GO:0048323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axial mesodermal cell fate determination","termid":"GO:0048324"}


id: PBO:0063570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase E","termid":"PBO:0063570"}


id: PBO:0005689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 6","termid":"PBO:0005689"}


id: PBO:0062793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orosomucoid 1","termid":"PBO:0062793"}


id: PBO:0070027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1324, pseudogene","termid":"PBO:0070027"}


id: PBO:0055466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2899","termid":"PBO:0055466"}


id: GO:0010524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate of the directed movement of calcium ions into the cytosol of a cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytosolic calcium ion concentration","termid":"GO:0007204"},{"relation_name":"is_a","term_name":"regulation of calcium ion transport into cytosol","termid":"GO:0010522"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"positively_regulates","term_name":"calcium ion transport into cytosol","termid":"GO:0060402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of calcium ion transport into cytosol","termid":"GO:0010524"}


id: PBO:0071978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 7","termid":"PBO:0071978"}


id: GO:0071817
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the proteins MMS19, MIP18 and XPD, localizes to mitotic spindle during mitosis, and is required for proper chromosome segregation.","definition_xrefs":["GOC:sp","PMID:20797633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"MMXD complex","synonyms":[{"name":"MMS19-MIP18-XPD complex","type":"exact"}],"termid":"GO:0071817"}


id: PATO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solid configuration inhering in a material entity by virtue of its constituent atoms, molecules, or ions being arranged in an orderly repeating pattern extending in all three spatial dimensions.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Crystal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solid configuration","termid":"PATO:0001736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystal configuration","termid":"PATO:0002066"}


id: PBO:0113429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; inhibits the mitotic exit network (MEN) when the spindle position checkpoint (SPOC) is activated; regulates peroxisomal transport and vacuolar inheritance along with Frk1p; protects the peroxisomal Myo2p receptor Inp2p from degradation in mother cells along with Frk1p; localizes asymmetrically to mother cell cortex, spindle pole body and bud neck; KIN4 has a paralog, FRK1, that arose from the whole genome duplication","termid":"PBO:0113429"}


id: FYPO:0004202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which spliced forms of RNAs transcribed from dg repeats in the centromere outer repeat region are present at lower levels than normal.","definition_xrefs":["PomBase:mah","PMID:25274039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased centromeric outer repeat transcript level","termid":"FYPO:0003094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased spliced cen-dg RNA level","synonyms":[{"name":"decreased level of spliced cen-dg RNA","type":"exact"},{"name":"decreased level of spliced cen-dg transcripts","type":"exact"},{"name":"decreased level of spliced centromeric dg repeat RNA","type":"exact"},{"name":"decreased level of spliced centromeric dg repeat transcripts","type":"exact"},{"name":"decreased spliced cen-dg RNA accumulation","type":"related"},{"name":"decreased spliced cen-dg RNA level during mitotic cell cycle","type":"related"},{"name":"decreased spliced cen-dg RNA level during vegetative growth","type":"exact"},{"name":"decreased spliced cen-dg transcript level","type":"exact"},{"name":"reduced spliced cen-dg RNA level","type":"exact"}],"termid":"FYPO:0004202"}


id: PBO:0085008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of the H(+)-ATPase Pma1p; stress-responsive protein; hydrophobic plasma membrane localized; induced by heat shock, ethanol treatment, weak organic acid, glucose limitation, and entry into stationary phase","termid":"PBO:0085008"}


id: SO:0002135
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rearranges at the DNA level and codes the diversity region of the variable domain of aT-cell receptor gene.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_D_Gene","synonyms":[{"name":"T_cell_receptor_D_gene","type":"exact"}],"termid":"SO:0002135"}


id: GO:0051401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a calponin homology protein domain, a domain of 100 residues that occurs in signaling and cytoskeletal proteins.","definition_xrefs":["PMID:11911887","Prosite:PDOC50021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CH domain binding","synonyms":[{"name":"calponin homology domain binding","type":"exact"}],"termid":"GO:0051401"}


id: SO:0000685
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA region representing open chromatin structure that is hypersensitive to digestion by DNase I.","direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_hypersensitive_site","termid":"SO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNaseI_hypersensitive_site","synonyms":[{"name":"DHS","type":"exact"},{"name":"DNaseI hypersensitive site","type":"exact"},{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:DNase_I_hypersensitive_site","type":"exact"}],"termid":"SO:0000685"}


id: PBO:0060109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 10","termid":"PBO:0060109"}


id: SO:0000829
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a nucleomorph.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"nucleomorphic_sequence","termid":"SO:0000739"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleomorphic_chromosome","synonyms":[{"name":"nucleomorphic chromosome","type":"exact"}],"termid":"SO:0000829"}


id: GO:0006426
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93073],"is_not":false,"summary":null,"term":"GO:0006426"},{"annotations":[93074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070150"}]},"cv_name":"biological_process","definition":"The process of coupling glycine to glycyl-tRNA, catalyzed by glycyl-tRNA synthetase. The glycyll-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a glycine-accepting tRNA.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"glycyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006426","terms_by_termid":{"GO:0006426":null,"GO:0070150":null}}


id: GO:0048453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the sepal. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"sepal morphogenesis","termid":"GO:0048447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal formation","secondary_identifiers":["GO:0048423"],"termid":"GO:0048453"}


id: GO:0035560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pheophorbide a + H2O = pyropheophorbide a + methanol + CO2. The reaction occurs in two steps; pheophoridase catalyzes the conversion of pheophorbide a to a precursor of pyropheophorbide a, C-13(2)-carboxylpyropheophorbide a, by demethylation, and then the precursor is decarboxylated non-enzymatically to yield pyropheophorbide a.","definition_xrefs":["PMID:16228561","RHEA:32483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pheophorbidase activity","secondary_identifiers":["EC:3.1.1.82"],"synonyms":[{"name":"PPD activity","type":"related"},{"name":"phedase activity","type":"related"},{"name":"pheophoridase activity","type":"related"}],"termid":"GO:0035560"}


id: GO:0061900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a glial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:18723082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"neuroinflammatory response","termid":"GO:0150076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell activation","termid":"GO:0061900"}


id: PBO:0017993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor transmembrane transporter Mam1","termid":"PBO:0017993"}


id: GO:1902905
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of supramolecular fiber organization.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:TermGenie","GOC:rl","PMID:23921388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"positively_regulates","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of supramolecular fiber organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of fibril organisation","type":"narrow"},{"name":"activation of fibril organization","type":"narrow"},{"name":"positive regulation of fibril organisation","type":"related"},{"name":"up regulation of fibril organisation","type":"related"},{"name":"up regulation of fibril organization","type":"related"},{"name":"up-regulation of fibril organisation","type":"related"},{"name":"up-regulation of fibril organization","type":"related"},{"name":"upregulation of fibril organisation","type":"related"},{"name":"upregulation of fibril organization","type":"related"}],"termid":"GO:1902905","terms_by_termid":{"GO:0031117":null}}


id: PBO:0086909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative vacuolar membrane transporter for cationic amino acids; likely contributes to amino acid homeostasis by exporting cationic amino acids from the vacuole; positive regulation by Lys14p suggests that lysine may be the primary substrate; member of the PQ-loop family, with seven transmembrane domains; similar to mammalian PQLC2 vacuolar transporter; RTC2 has a paralog, YPQ1, that arose from the whole genome duplication","termid":"PBO:0086909"}


id: GO:0042169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class.","definition_xrefs":["Pfam:PF00017","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"SH2 domain binding","termid":"GO:0042169"}


id: PR:O13938
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0658 Golgi apparatus membrane protein C23H3.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.04","synonyms":[{"name":"Spom972h-SPAC23H3.04","type":"exact"}],"termid":"PR:O13938"}


id: PR:P36584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L3-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.06c","synonyms":[{"name":"Spom972h-rpl302","type":"exact"}],"termid":"PR:P36584"}


id: PBO:0081848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 781","termid":"PBO:0081848"}


id: PR:Q9URY5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A flavohemoprotein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavohemoprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.02c","secondary_identifiers":["UniProtKB:Q9URY5"],"synonyms":[{"name":"Flavohemoglobin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NO oxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NOD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hmp","type":"exact"},{"name":"hemoglobin-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nitric oxide dioxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URY5"}


id: PBO:0078003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 3","termid":"PBO:0078003"}


id: PBO:0084187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone glutamine methyltransferase, modifies H2A at Q105 in nucleolus; component of the small subunit processome complex, which is required for processing of pre-18S rRNA; ortholog of mammalian fibrillarin; inviability of the null mutant is functionally complemented by human FBL","termid":"PBO:0084187"}


id: PBO:0074070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 45","termid":"PBO:0074070"}


id: PBO:0001209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1688 family protein","termid":"PBO:0001209"}


id: PBO:0054196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1571","termid":"PBO:0054196"}


id: PBO:0013809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase Erg27 (predicted)","termid":"PBO:0013809"}


id: GO:2001315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a UDP-4-deoxy-4-formamido-beta-L-arabinopyranose.","definition_xrefs":["GOC:yaf","UniPathway:UPA00032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"},{"relation_name":"is_a","term_name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process","termid":"GO:2001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose biosynthetic process","synonyms":[{"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose anabolism","type":"exact"},{"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose biosynthesis","type":"exact"},{"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose formation","type":"exact"},{"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose synthesis","type":"exact"}],"termid":"GO:2001315"}


id: GO:0030856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell differentiation","termid":"GO:0030856"}


id: PR:Q9USZ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An mRNA turnover protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21141:SF1","OMA:SCHPO02987","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly factor mrt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.03","secondary_identifiers":["UniProtKB:Q9USZ6"],"synonyms":[{"name":"Spom972h-MRTO4","type":"exact"},{"name":"mRNA turnover protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ6"}


id: PBO:0080867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YjeF N-terminal domain containing 3","termid":"PBO:0080867"}


id: GO:0097416
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic inclusion found in neurons. It consists of filaments and granular materials, exhibits a dense core with a rough peripheral halo and lacks a limiting membrane. The filaments of these inclusions are composed of approximately 15-25 nm granule-coated fibrils in association with normal 10-nm neurofilaments.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090105","PMID:18026741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Lewy body-like hyaline inclusion","synonyms":[{"name":"LBHI","type":"exact"}],"termid":"GO:0097416"}


id: GO:0061067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nematode larval development","termid":"GO:0061064"},{"relation_name":"is_a","term_name":"regulation of dauer larval development","termid":"GO:0061065"},{"relation_name":"negatively_regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dauer larval development","termid":"GO:0061067"}


id: PBO:0059333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6 pseudogene 2","termid":"PBO:0059333"}


id: GO:0047496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:ecd","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"},{"relation_name":"is_a","term_name":"vesicle cytoskeletal trafficking","termid":"GO:0099518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vesicle transport along microtubule","synonyms":[{"name":"microtubule-based vesicle localization","type":"exact"}],"termid":"GO:0047496"}


id: GO:0031561
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of a growing fungal bud.","definition_xrefs":["PMID:9632790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"cellular bud tip","termid":"GO:0005934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cellular bud tip polarisome","termid":"GO:0031561"}


id: PBO:0029241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_centromere_outer_repeat","termid":"PBO:0029241"}


id: FYPO:0001680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is abolished during the round of DNA replication that precedes meiosis I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to chromatin during premeiotic DNA replication","synonyms":[{"name":"abolished protein localisation to chromatin during premeiotic DNA replication","type":"exact"},{"name":"protein localization to chromatin during premeiotic DNA replication abolished","type":"exact"}],"termid":"FYPO:0001680"}


id: PBO:0056327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 9","termid":"PBO:0056327"}


id: PBO:0089558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanosine 34-2'-O)-methyltransferase regulator Trm734","termid":"PBO:0089558"}


id: GO:0038129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor ERBB3 on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription. ERBB3 receptors have impaired kinase activity and rely on the kinase activity of the heterodimer partner for activation and signal transmission.","definition_xrefs":["GOC:jc","PMID:16460914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB3 signaling pathway","synonyms":[{"name":"ERBB3 signalling pathway","type":"exact"},{"name":"HER3 signaling pathway","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"}],"termid":"GO:0038129"}


id: GO:0038045
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing latency-associated proteins (LAPs), mature disulphide-linked dimeric TGF-beta, and latent TGF-beta binding proteins (LTBPs). TGF-beta is mostly secreted as part of the large latent complex, and must be subsequently released from the LLC in order to bind to cell surface receptors.","definition_xrefs":["GOC:bf","PMID:8680476","PMID:9805445","PMID:2350783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"large latent transforming growth factor-beta complex","synonyms":[{"name":"LLC","type":"exact"},{"name":"large latent complex","type":"exact"}],"termid":"GO:0038045"}


id: MOD:00871
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with (2)H5-phenyl isocyanate.","definition_xrefs":["Unimod:412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenyl isocyanate derivatized residue","termid":"MOD:00870"},{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2)H5-phenyl isocyanate derivatized residue","synonyms":[{"name":"Phenylisocyanate:2H(5)","type":"related"},{"name":"d5-phenyl isocyanate","type":"related"}],"termid":"MOD:00871"}


id: PR:O94287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized chloride channel protein C887.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.02","synonyms":[{"name":"Spom972h-SPBC887.02","type":"exact"}],"termid":"PR:O94287"}


id: PBO:0054537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1937","termid":"PBO:0054537"}


id: PBO:0077828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member G, pseudogene","termid":"PBO:0077828"}


id: PBO:0064243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D2","termid":"PBO:0064243"}


id: PBO:0114115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/TATA-binding protein associated factor/transcription factor TFIID complex WD repeat subunit Taf5","termid":"PBO:0114115"}


id: PBO:0056178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFA antisense RNA 1","termid":"PBO:0056178"}


id: PBO:0013766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin capping protein beta subunit Acp2","termid":"PBO:0013766"}


id: PBO:0060871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member C/D","termid":"PBO:0060871"}


id: FYPO:0006140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-eicosenoylglycerophosphocholine (20:1n9) measured in a cell is higher than normal.","definition_xrefs":["PMID:28667014","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular 1-eicosenoylglycerophosphocholine (20:1n9) level","synonyms":[{"name":"increased 1-eicosenoylglycerophosphocholine (20:1n9) accumulation","type":"related"},{"name":"increased cellular 1-(11Z)-icosenoyl-sn-glycero-3-phosphocholine level","type":"exact"},{"name":"increased cellular 1-eicosenoylglycerophosphocholine (20:1n9) level during mitotic cell cycle","type":"related"},{"name":"increased cellular 1-eicosenoylglycerophosphocholine (20:1n9) level during vegetative growth","type":"exact"}],"termid":"FYPO:0006140"}


id: FYPO:0005385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the first meiotic nuclear division (part of the meiotic cell cycle) is arrested in metaphase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic metaphase I","secondary_identifiers":["FYPO:0006769"],"synonyms":[{"name":"abnormal cell cycle arrest in metaphase I","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase I during meiotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase during first meiotic nuclear division","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase of meiosis I","type":"exact"},{"name":"abnormal meiotic cell cycle arrest in metaphase I","type":"exact"},{"name":"abolished meiosis I metaphase/anaphase transition","type":"related"}],"termid":"FYPO:0005385"}


id: PBO:0038690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 1","termid":"PBO:0038690"}


id: GO:0030181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exchange diffusion sodium and calcium ions in which influx of sodium ions to the cytosol drives the efflux of calcium ions from the cell.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:calcium exchange (obsolete GO:0030181)","synonyms":[{"name":"sodium:calcium exchange","type":"exact"}],"termid":"GO:0030181"}


id: PBO:0028969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_superoxide_dismutase_activity","termid":"PBO:0028969"}


id: GO:0035940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism.","definition_xrefs":["PMID:10595640","GOC:klp"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of peptidase activity in other organism (obsolete GO:0035940)","synonyms":[{"name":"down regulation of peptidase activity in other organism","type":"exact"},{"name":"down-regulation of protease activity in other organism","type":"narrow"},{"name":"downregulation of peptidase activity in other organism","type":"exact"},{"name":"inhibition of protease activity in other organism","type":"narrow"},{"name":"negative regulation of protease activity in other organism","type":"narrow"}],"termid":"GO:0035940"}


id: GO:0005363
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"}]},"cv_name":"molecular_function","definition":"Enables the transfer of maltose from one side of a membrane to the other. Maltose is the disaccharide 4-O-alpha-D-glucopyranosyl-D-glucopyranose, an intermediate in the enzymatic breakdown of glycogen and starch.","definition_xrefs":["GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"maltose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015581","RHEA:33171"],"synonyms":[{"name":"maltose porter activity","type":"exact"}],"termid":"GO:0005363","terms_by_termid":{"GO:0005364":null}}


id: SO:0000992
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA that has been inserted into the bacterial genome using a bacterial artificial chromosome.","direct_ancestors":[{"relation_name":"derives_from","term_name":"BAC","termid":"SO:0000153"},{"relation_name":"is_a","term_name":"cloned_genomic_insert","termid":"SO:0000914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC_cloned_genomic_insert","synonyms":[{"name":"BAC cloned genomic insert","type":"exact"}],"termid":"SO:0000992"}


id: PBO:0082945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic inorganic pyrophosphatase (PPase); homodimer that catalyzes the rapid exchange of oxygens from Pi with water, highly expressed and essential for viability, active-site residues show identity to those from E. coli PPase","termid":"PBO:0082945"}


id: PBO:0074296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAFB like transcription modulator","termid":"PBO:0074296"}


id: GO:0047401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + trithionate = H+ + sulfate + thiosulfate.","definition_xrefs":["RHEA:21884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid sulfur-sulfur bonds","termid":"GO:0016828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"trithionate hydrolase activity","secondary_identifiers":["EC:3.12.1.1","MetaCyc:3.12.1.1-RXN","KEGG_REACTION:R01930"],"synonyms":[{"name":"trithionate thiosulfohydrolase activity","type":"related"}],"termid":"GO:0047401"}


id: GO:1903224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endodermal cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:23154389","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endodermal cell differentiation","synonyms":[{"name":"regulation of endoderm cell differentiation","type":"exact"}],"termid":"GO:1903224"}


id: GO:0051553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavones, a class of pigmented plant compounds based on 2-phenyl-4H-1-benzopyran-4-one (2-phenylchromone).","definition_xrefs":["GOC:ai","PMID:18567791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavone biosynthetic process","synonyms":[{"name":"2-phenyl-4H-1-benzopyran-4-one biosynthesis","type":"narrow"},{"name":"2-phenyl-4H-1-benzopyran-4-one biosynthetic process","type":"narrow"},{"name":"2-phenylchromone biosynthesis","type":"narrow"},{"name":"2-phenylchromone biosynthetic process","type":"narrow"}],"termid":"GO:0051553"}


id: PBO:0000132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELLA family acetyltransferase (predicted)","termid":"PBO:0000132"}


id: PBO:0089077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L6","termid":"PBO:0089077"}


id: PBO:0080082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 44","termid":"PBO:0080082"}


id: GO:0099183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the vesicular release and reception of brain derived neurotrophic factor (BDNF), that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by BDNF","termid":"GO:0099191"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by BDNF, modulating synaptic transmission","termid":"GO:0099183"}


id: PBO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal DNA (rDNA) transcription factor Rrn3","termid":"PBO:0001432"}


id: GO:0001787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a natural killer cell population by cell division.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell activation","termid":"GO:0030101"},{"relation_name":"is_a","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell proliferation","synonyms":[{"name":"NK cell proliferation","type":"exact"}],"termid":"GO:0001787"}


id: PBO:0049835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high density lipoprotein binding protein","termid":"PBO:0049835"}


id: PBO:0080083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 45","termid":"PBO:0080083"}


id: PBO:0042843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 47","termid":"PBO:0042843"}


id: PBO:0072432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 6","termid":"PBO:0072432"}


id: GO:0044186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any particle of coalesced lipids in the cytoplasm of a host cell. May include associated proteins.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell lipid droplet","synonyms":[{"name":"host cell lipid adiposome","type":"exact"},{"name":"host cell lipid body","type":"exact"},{"name":"host cell lipid particle","type":"exact"}],"termid":"GO:0044186"}


id: PATO:0001347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A bacterial mating type indicating the presence of F plasmid in a bacterial cell.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial mating type","termid":"PATO:0001335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F mating type","termid":"PATO:0001347"}


id: GO:0098724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Symmetric division of a stem cell to produce two stem cells of the same type as the parent. Symmetric stem cell division is necessary for amplification of stem cell populations in the absence of sources of stem cells external to an existing population.","definition_xrefs":["PMID:19948499","PMID:23303905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"},{"relation_name":"is_a","term_name":"symmetric cell division","termid":"GO:0098725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symmetric stem cell division","termid":"GO:0098724"}


id: PBO:0051086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant gamma 4 (G4m marker)","termid":"PBO:0051086"}


id: PBO:0067070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 98, pseudogene","termid":"PBO:0067070"}


id: PBO:0088336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER zinc exporter, ZIP family Zip3","termid":"PBO:0088336"}


id: PBO:0030113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-formation_of_abnormal_tRNA_processing_intermediates","termid":"PBO:0030113"}


id: GO:1990491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methane from methanol and hydrogen.","definition_xrefs":["GOC:mengo_curators","PMID:16347126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanogenesis, from methanol","termid":"GO:0019387"},{"relation_name":"is_a","term_name":"hydrogen metabolic process","termid":"GO:1902421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"methane biosynthetic process from methanol and hydrogen","synonyms":[{"name":"methane biosynthesis from methanol and hydrogen","type":"exact"},{"name":"methanogenesis from methanol and hydrogen","type":"exact"}],"termid":"GO:1990491"}


id: GO:1905685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plasma membrane repair.","definition_xrefs":["GOC:bhm","GO_REF:0000058","PMID:22940583","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of wound healing","termid":"GO:0061045"},{"relation_name":"is_a","term_name":"regulation of plasma membrane repair","termid":"GO:1905684"},{"relation_name":"negatively_regulates","term_name":"plasma membrane repair","termid":"GO:0001778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma membrane repair","synonyms":[{"name":"down regulation of plasma membrane repair","type":"exact"},{"name":"down-regulation of plasma membrane repair","type":"exact"},{"name":"downregulation of plasma membrane repair","type":"exact"},{"name":"inhibition of plasma membrane repair","type":"narrow"}],"termid":"GO:1905685"}


id: PBO:0038697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 9","termid":"PBO:0038697"}


id: PBO:0061530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSMCE1 divergent transcript","termid":"PBO:0061530"}


id: GO:0032958
data:
  {"annotated_genes":["SJAG_01148","SJAG_02321","SJAG_00321","SJAG_03409","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89414,94870,111203,113182,114995],"is_not":false,"summary":null,"term":"GO:0032958"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00321":null,"SJAG_01148":null,"SJAG_02321":null,"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inositol phosphate anabolism","type":"exact"},{"name":"inositol phosphate biosynthesis","type":"exact"},{"name":"inositol phosphate formation","type":"exact"},{"name":"inositol phosphate synthesis","type":"exact"},{"name":"myo-inositol phosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032958","terms_by_termid":{"GO:0032958":null}}


id: GO:0015813
data:
  {"annotated_genes":["SJAG_00522","SJAG_00626","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92619],"is_not":false,"summary":null,"term":"GO:0015813"},{"annotations":[94303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[99949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate import","termid":"GO:0051938"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-glutamate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0089711"],"synonyms":[{"name":"L-glutamate transport","type":"broad"},{"name":"mitochondrial aspartate/glutamate transport","type":"related"}],"termid":"GO:0015813","terms_by_termid":{"GO:0015813":null,"GO:0090515":null,"GO:0110141":null}}


id: PBO:0059712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 20","termid":"PBO:0059712"}


id: PBO:0075923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 15","termid":"PBO:0075923"}


id: GO:0046897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of the N-terminal tyrosine of proteins to form the derivative N-methyl-L-tyrosine.","definition_xrefs":["RESID:AA0338"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-tyrosine methylation (obsolete GO:0046897)","termid":"GO:0046897"}


id: GO:0097642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with any member of the calcitonin family (e.g. adrenomedullin, adrenomedullin 2 (intermedin), amylin, calcitonin and calcitonin gene-related peptides (CGRPs)) to initiate a change in cell activity.","definition_xrefs":["GOC:bhm","PMID:12037140","InterPro:IPR003287","PMID:10871296","PMID:18687416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"calcitonin family receptor activity","termid":"GO:0097642"}


id: PBO:0072485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 14","termid":"PBO:0072485"}


id: FYPO:0007681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a RNA-DNA hybrid ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal RNA-DNA hybrid ribonuclease activity","termid":"FYPO:0007681"}


id: GO:0062174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brexanolone.","definition_xrefs":["PMID:24390875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"brexanolone metabolic process","termid":"GO:0062173"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"brexanolone biosynthetic process","synonyms":[{"name":"allopregnanolone anabolism","type":"exact"},{"name":"allopregnanolone biosynthesis","type":"exact"},{"name":"allopregnanolone biosynthetic process","type":"exact"},{"name":"allopregnanolone synthesis","type":"exact"},{"name":"allotetrahydroprogesterone anabolism","type":"exact"},{"name":"allotetrahydroprogesterone biosynthesis","type":"exact"},{"name":"allotetrahydroprogesterone biosynthetic process","type":"exact"},{"name":"allotetrahydroprogesterone synthesis","type":"exact"},{"name":"brexanolone anabolism","type":"exact"},{"name":"brexanolone biosynthesis","type":"exact"},{"name":"brexanolone synthesis","type":"exact"}],"termid":"GO:0062174"}


