# terms

id: GO:0090615
data:
  {"annotated_genes":["SJAG_00797","SJAG_04377","SJAG_00077","SJAG_04885","SJAG_00428"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85988,92309,100048,106744],"is_not":false,"summary":null,"term":"GO:0090615"},{"annotations":[106032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140040"}]},"cv_name":"biological_process","definition":"Steps involved in processing precursor RNAs arising from transcription of operons in the mitochondrial genome into mature mRNAs.","definition_xrefs":["PMID:25181358","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"mitochondrial RNA processing","termid":"GO:0000963"},{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00428":null,"SJAG_00797":null,"SJAG_04377":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150","GO:0140053"],"is_obsolete":false,"name":"mitochondrial mRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090615","terms_by_termid":{"GO:0090615":null,"GO:0140040":null}}


id: GO:0043910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + factor gamma-F420-2 + H+ = coenzyme F390-A + diphosphate.","definition_xrefs":["MetaCyc:RXN-9385","PMID:8550473","GOC:jl","PMID:7957247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"ATP:coenzyme F420 adenylyltransferase activity","synonyms":[{"name":"ATP:coenzyme F420 adenyltransferase activity","type":"exact"},{"name":"coenzyme F390-A synthetase activity","type":"exact"}],"termid":"GO:0043910"}


id: FYECO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that specifies one or more chemical(s) that are added to, or excluded from, growth medium, assay buffer, etc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemical added or excluded","secondary_identifiers":["FYECO:0000017","FYECO:0000020","FYECO:0000019"],"synonyms":[{"name":"chemical added","type":"related"},{"name":"chemicals","type":"related"}],"termid":"FYECO:0000059"}


id: GO:0051491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filopodium assembly","termid":"GO:0051489"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"positively_regulates","term_name":"filopodium assembly","termid":"GO:0046847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of filopodium assembly","synonyms":[{"name":"activation of filopodium formation","type":"narrow"},{"name":"positive regulation of filopodia biosynthesis","type":"exact"},{"name":"positive regulation of filopodia formation","type":"exact"},{"name":"positive regulation of filopodium formation","type":"exact"},{"name":"stimulation of filopodium formation","type":"narrow"},{"name":"up regulation of filopodium formation","type":"exact"},{"name":"up-regulation of filopodium formation","type":"exact"},{"name":"upregulation of filopodium formation","type":"exact"}],"termid":"GO:0051491"}


id: FYPO:0006888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is normal (i.e. indistinguishable from wild type) when the cell is subject to iron ion starvation.","definition_xrefs":["PomBase:mah","PMID:29549126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to plasma membrane","termid":"FYPO:0002674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to plasma membrane during iron starvation","synonyms":[{"name":"normal protein localisation to plasma membrane during iron starvation","type":"exact"},{"name":"normal protein localization to plasma membrane during iron ion starvation","type":"exact"},{"name":"normal protein localization to plasma membrane during iron starvation during mitotic cell cycle","type":"related"},{"name":"normal protein localization to plasma membrane during iron starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0006888"}


id: PBO:0081809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 2, Y-linked","termid":"PBO:0081809"}


id: PBO:0056390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKAPK5 antisense RNA 1","termid":"PBO:0056390"}


id: PBO:0027916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_export_from_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0027916"}


id: PBO:0088106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uridylate kinase; catalyzes the seventh enzymatic step in the de novo biosynthesis of pyrimidines, converting uridine monophosphate (UMP) into uridine-5'-diphosphate (UDP)","termid":"PBO:0088106"}


id: PBO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic delta subunit","termid":"PBO:0043085"}


id: GO:0031529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell.","definition_xrefs":["PMID:10036235","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ruffle organization","synonyms":[{"name":"ruffle organisation","type":"exact"},{"name":"ruffle organization and biogenesis","type":"related"}],"termid":"GO:0031529"}


id: PBO:0041121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTBD3 antisense RNA 1","termid":"PBO:0041121"}


id: PBO:0088447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Cki1","termid":"PBO:0088447"}


id: FYPO:0007091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription by zinc occurs to a greater extent than normal. Specific genes that are normally not transcribed in the presence of zinc ions are not derepressed in the mutant under conditions that derepress transcription in wild type cells.","definition_xrefs":["PomBase:mah","PMID:31515876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription by nutrient","termid":"FYPO:0007090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased negative regulation of transcription by zinc","synonyms":[{"name":"increased gene repression in response to zinc","type":"exact"},{"name":"increased negative regulation of transcription by zinc during mitotic cell cycle","type":"related"},{"name":"increased negative regulation of transcription by zinc during vegetative growth","type":"exact"},{"name":"increased negative regulation of transcription in response to zinc","type":"exact"}],"termid":"FYPO:0007091"}


id: PBO:0053045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 4B","termid":"PBO:0053045"}


id: MOD:01822
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-zero reporter+balance group.","definition_xrefs":["Unimod:984","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysTMT6plex-zero reporter+balance reagent cysteine disulfide","synonyms":[{"name":"Native cysteine-reactive Tandem Mass Tag(TM)","type":"related"},{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT","type":"related"}],"termid":"MOD:01822"}


id: PBO:0060487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 9","termid":"PBO:0060487"}


id: PBO:0029725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis,_with_abnormal_nuclear_division","termid":"PBO:0029725"}


id: GO:2000298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rho-dependent protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Rho-dependent protein serine/threonine kinase activity","synonyms":[{"name":"regulation of ROCK kinase activity","type":"exact"},{"name":"regulation of Rho-associated protein kinase activity","type":"exact"}],"termid":"GO:2000298"}


id: PBO:0031827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_modification","termid":"PBO:0031827"}


id: GO:1902253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway by p53 class mediator.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:mtg_apoptosis","GOC:rl","PMID:15705871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:0072332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway by p53 class mediator","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"regulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902253"}


id: GO:0150142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD86 biosynthetic process.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of CD86 production","termid":"GO:0150140"},{"relation_name":"positively_regulates","term_name":"CD86 biosynthetic process","termid":"GO:0035781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD86 production","synonyms":[{"name":"positive regulation of CD86 biosynthetic process","type":"exact"}],"termid":"GO:0150142"}


id: GO:0048291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to biosynthesis of an IgG isotype, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and one of the IgG constant region gene segments in the immunoglobulin heavy chain locus.","definition_xrefs":["ISBN:0781735149","PMID:12370374","PMID:2113175","PMID:9186655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"isotype switching to IgG isotypes","synonyms":[{"name":"class switching to IgG isotypes","type":"exact"},{"name":"isotype switch recombination to IgG isotypes","type":"exact"}],"termid":"GO:0048291"}


id: PBO:0087590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; mutation is functionally complemented by human ARPC4","termid":"PBO:0087590"}


id: MOD:01618
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alaine residue and an L-asparagine residue to L-alanyl-L-isoaspartyl cyclopeptide.","definition_xrefs":["RESID:AA0515","PubMed:3207697","PubMed:19928958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"crosslinked L-alanine residue","termid":"MOD:02040"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanyl-L-isoaspartyl cyclopeptide","synonyms":[{"name":"(2S,5S)-2-methyl-3,7-dioxo-1,4-diazepane-5-carboxylic acid","type":"exact"},{"name":"1,4.2-anhydro(L-alanyl-L-aspartic acid)","type":"exact"},{"name":"CROSSLNK Alanine isoaspartyl cyclopeptide (Ala-Asn)","type":"exact"},{"name":"L-alanyl-L-isoaspartyl cyclopeptide","type":"exact"}],"termid":"MOD:01618"}


id: PBO:0026753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_re-entry_into_mitotic_cell_cycle_after_arrest_in_response_to_hydroxyurea","termid":"PBO:0026753"}


id: PBO:0065038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 3","termid":"PBO:0065038"}


id: PBO:0066141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB associated KRAB zinc finger","termid":"PBO:0066141"}


id: GO:0072488
data:
  {"annotated_genes":["SJAG_04136","SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95330,115178],"is_not":false,"summary":null,"term":"GO:0072488"}]},"cv_name":"biological_process","definition":"The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04136":null,"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"ammonium transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015696"],"synonyms":[{"name":"ammonia transport","type":"broad"},{"name":"ammonium membrane transport","type":"exact"},{"name":"ammonium transport","type":"broad"}],"termid":"GO:0072488","terms_by_termid":{"GO:0072488":null}}


id: GO:0046903
data:
  {"annotated_genes":["SJAG_03499","SJAG_03938","SJAG_02368","SJAG_01324","SJAG_03718","SJAG_04509","SJAG_03357","SJAG_02012","SJAG_03864","SJAG_02320","SJAG_03754","SJAG_01722","SJAG_03536","SJAG_00355","SJAG_00332","SJAG_07004","SJAG_04044","SJAG_03915","SJAG_02166","SJAG_00826","SJAG_04517","SJAG_01563","SJAG_01772","SJAG_04343","SJAG_02518","SJAG_01925","SJAG_04966","SJAG_03246","SJAG_04960","SJAG_02753","SJAG_02572","SJAG_03005","SJAG_00661","SJAG_04058","SJAG_01448","SJAG_02366","SJAG_01697","SJAG_00280","SJAG_03763","SJAG_01048","SJAG_02004","SJAG_00430","SJAG_02587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93520,109063,114707,115009,91073,103513,84796,84433,91037,96931,98763,111808,88293,90286,89902,87499,88038,101183,86778,98005,104333,84026,112390,113725,87169,87315,113313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006887"},{"annotations":[96257],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045921"},{"annotations":[89886,94478,83935],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0017157"},{"annotations":[113684,114606,88354,86605,85753,114387,96338,115012],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006904"},{"annotations":[84659,98007,110315,113907,115013,86780,110025,95630],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The controlled release of a substance by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_00332":null,"SJAG_00355":null,"SJAG_00430":null,"SJAG_00661":null,"SJAG_00826":null,"SJAG_01048":null,"SJAG_01324":null,"SJAG_01448":null,"SJAG_01563":null,"SJAG_01697":null,"SJAG_01722":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_02004":null,"SJAG_02012":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02366":null,"SJAG_02368":null,"SJAG_02518":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02753":null,"SJAG_03005":null,"SJAG_03246":null,"SJAG_03357":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03718":null,"SJAG_03754":null,"SJAG_03763":null,"SJAG_03864":null,"SJAG_03915":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04058":null,"SJAG_04343":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_07004":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"secretion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046903","terms_by_termid":{"GO:0006887":null,"GO:0006904":null,"GO:0017157":null,"GO:0045921":null,"GO:0090522":null}}


id: PR:P87054
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 15 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.06","synonyms":[{"name":"Spom972h-mug15","type":"exact"}],"termid":"PR:P87054"}


id: PATO:0000640
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's exhibiting an alteration in size, shape or organization of its constituent cells.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplastic","synonyms":[{"name":"dysplasia","type":"narrow"}],"termid":"PATO:0000640"}


id: PBO:0051957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR3 antisense RNA 1","termid":"PBO:0051957"}


id: PBO:0060793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S4","termid":"PBO:0060793"}


id: PBO:0044885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 11","termid":"PBO:0044885"}


id: PBO:0084115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase-like protein encoded within the telomeric Y' element","termid":"PBO:0084115"}


id: PBO:0031047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_acetylation","termid":"PBO:0031047"}


id: FYPO:0002997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of DNA replication during the mitotic cell cycle is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of DNA replication","termid":"FYPO:0002995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal negative regulation of DNA replication during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal negative regulation of DNA replication during cellular response to MMS","type":"exact"},{"name":"normal negative regulation of DNA replication during cellular response to methyl methanesulphonate","type":"exact"},{"name":"normal negative regulation of nuclear cell cycle DNA replication during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002997"}


id: FYPO:0006374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein processing is abnormal. Protein processing is the cleavage of one or more bonds within a protein that leads to the formation of mature, fully functional protein.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal proteolysis","termid":"FYPO:0005376"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein processing","synonyms":[{"name":"abnormal protein cleavage","type":"related"},{"name":"abnormal protein maturation by peptide bond cleavage","type":"exact"},{"name":"abnormal protein maturation by peptide bond hydrolysis","type":"exact"}],"termid":"FYPO:0006374"}


id: PBO:0054672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2078","termid":"PBO:0054672"}


id: PBO:0067060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 82, pseudogene","termid":"PBO:0067060"}


id: SO:0000888
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is maternally_imprinted.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"maternally_imprinted","termid":"SO:0000135"},{"relation_name":"is_a","term_name":"epigenetically_modified_gene","termid":"SO:0000898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally_imprinted_gene","synonyms":[{"name":"maternally imprinted gene","type":"exact"}],"termid":"SO:0000888"}


id: PBO:0072441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 5","termid":"PBO:0072441"}


id: PBO:0047720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 11, pseudogene","termid":"PBO:0047720"}


id: PATO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000459 relative quantity value (obsolete PATO:0000459)","termid":"PATO:0000459"}


id: PBO:0065671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRS antisense RNA 1","termid":"PBO:0065671"}


id: PBO:0047119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 166 member B","termid":"PBO:0047119"}


id: GO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature myeloid dendritic cell acquires the specialized features of a mature myeloid dendritic cell as part of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell activation involved in immune response","termid":"GO:0002277"},{"relation_name":"is_a","term_name":"myeloid dendritic cell differentiation","termid":"GO:0043011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell differentiation involved in immune response","synonyms":[{"name":"myeloid dendritic cell differentiation during immune response","type":"related"}],"termid":"GO:0002284"}


id: GO:0009480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class IIb cytochrome c (obsolete GO:0009480)","synonyms":[{"name":"class IIb cytochrome c","type":"exact"}],"termid":"GO:0009480"}


id: PBO:0059177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscle RAS oncogene homolog","termid":"PBO:0059177"}


id: SO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 2nd residue (an arginine), from the start of the H3 protein is mono-methylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3R2_monomethylation_site","synonyms":[{"name":" H3R2me1","type":"exact"},{"name":"H3R2 monomethylation site","type":"exact"}],"termid":"SO:0001947"}


id: GO:0075220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zoospore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore encystment on host","termid":"GO:0075216"},{"relation_name":"is_a","term_name":"modulation of zoospore encystment on host","termid":"GO:0075219"},{"relation_name":"positively_regulates","term_name":"zoospore encystment on host","termid":"GO:0075218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zoospore encystment on host","termid":"GO:0075220"}


id: MOD:01516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 144.099-144.106 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass diferences that are nominally equal at 144.099-144.106 Da.","termid":"MOD:01516"}


id: PBO:0062209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AH member 1 pseudogene","termid":"PBO:0062209"}


id: PBO:0044493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 51 subfamily A member 1 pseudogene 1","termid":"PBO:0044493"}


id: GO:0070496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thrombin-activated receptor protein signaling pathway activity. A thrombin receptor signaling pathway is the series of molecular signals generated as a consequence of a thrombin-activated receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of thrombin-activated receptor signaling pathway","termid":"GO:0070494"},{"relation_name":"positively_regulates","term_name":"thrombin-activated receptor signaling pathway","termid":"GO:0070493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of thrombin-activated receptor signaling pathway","synonyms":[{"name":"positive regulation of thrombin receptor signaling pathway","type":"exact"},{"name":"positive regulation of thrombin receptor signalling pathway","type":"exact"}],"termid":"GO:0070496"}


id: PBO:0049140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic--pyruvic transaminase","termid":"PBO:0049140"}


id: PBO:0041200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD31 homolog","termid":"PBO:0041200"}


id: PBO:0058782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7151","termid":"PBO:0058782"}


id: GO:0042908
data:
  {"annotated_genes":["SJAG_03951","SJAG_01145","SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114130,113199,92552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"The directed movement of a xenobiotic into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:krc","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"xenobiotic transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015893"],"synonyms":[{"name":"drug transport","type":"related"}],"termid":"GO:0042908","terms_by_termid":{"GO:1990961":null}}


id: PBO:0046298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"empty spiracles homeobox 1","termid":"PBO:0046298"}


id: PR:P30776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A double-strand-break repair protein rad21 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12585:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin subunit rad21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.17c","secondary_identifiers":["UniProtKB:P30776"],"synonyms":[{"name":"SCC1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC338.17c","type":"related"},{"name":"Spom972h-RAD21","type":"exact"},{"name":"double-strand-break repair protein rad21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30776"}


id: PBO:0071918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 3","termid":"PBO:0071918"}


id: GO:0050870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte cell-cell adhesion","termid":"GO:1903039"},{"relation_name":"positively_regulates","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell activation","synonyms":[{"name":"activation of T cell activation","type":"narrow"},{"name":"positive regulation of T lymphocyte activation","type":"exact"},{"name":"positive regulation of T-cell activation","type":"exact"},{"name":"positive regulation of T-lymphocyte activation","type":"exact"},{"name":"stimulation of T cell activation","type":"narrow"},{"name":"up regulation of T cell activation","type":"exact"},{"name":"up-regulation of T cell activation","type":"exact"},{"name":"upregulation of T cell activation","type":"exact"}],"termid":"GO:0050870"}


id: FYPO:0007124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during prophase is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PomBase:mah","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during prophase","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during prophase","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during prophase during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during prophase during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0007124"}


id: PBO:0080180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDAC2 pseudogene 1","termid":"PBO:0080180"}


id: PBO:0087257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in sphingolipid-mediated signaling pathway that controls endocytosis; activates Ypk1p and Ypk2p, components of signaling cascade required for maintenance of cell wall integrity; contains a PH-like domain; redundant with Pkh2p; PKH1 has a paralog, PKH2, that arose from the whole genome duplication","termid":"PBO:0087257"}


id: FYPO:0002708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore formation does not occur. In prospore formation, each haploid nucleus becomes encapsulated by a double membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore formation","termid":"FYPO:0000196"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000121"],"is_obsolete":false,"name":"abolished prospore formation","synonyms":[{"name":"abolished ascospore-type prospore assembly","type":"exact"},{"name":"abolished forespore formation","type":"exact"},{"name":"forespore formation abolished","type":"exact"}],"termid":"FYPO:0002708"}


id: PBO:0080695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 2B","termid":"PBO:0080695"}


id: PBO:0049715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 3","termid":"PBO:0049715"}


id: GO:1902613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anti-Mullerian hormone signaling pathway.","definition_xrefs":["GOC:hjd","GO_REF:0000058","GOC:TermGenie","PMID:23624077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"is_a","term_name":"regulation of anti-Mullerian hormone signaling pathway","termid":"GO:1902612"},{"relation_name":"negatively_regulates","term_name":"anti-Mullerian hormone receptor signaling pathway","termid":"GO:1990262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of anti-Mullerian hormone signaling pathway","synonyms":[{"name":"down regulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"down-regulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"downregulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"inhibition of anti-Mullerian hormone signaling pathway","type":"narrow"}],"termid":"GO:1902613"}


id: PBO:0081623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 552","termid":"PBO:0081623"}


id: PBO:0031559
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_catalytic_activity","termid":"PBO:0031559"}


id: PBO:0085778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the AP180 family, involved in clathrin cage assembly; binds Pan1p and clathrin; YAP1801 has a paralog, YAP1802, that arose from the whole genome duplication","termid":"PBO:0085778"}


id: GO:0031766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 galanin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galanin receptor binding","termid":"GO:0031763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 3 galanin receptor binding","synonyms":[{"name":"type 3 galanin receptor ligand","type":"narrow"}],"termid":"GO:0031766"}


id: GO:0047839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dATP + depurinated DNA = ribose triphosphate + DNA.","definition_xrefs":["EC:2.6.99.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0003824","GO:0140097","GO:0016740"],"is_obsolete":false,"name":"dATP(dGTP)-DNA purinetransferase activity","secondary_identifiers":["MetaCyc:DATPDGTP--DNA-PURINE-TRANSFERASE-RXN"],"synonyms":[{"name":"dATP(dGTP)--DNA purine transferase activity","type":"exact"},{"name":"dATP(dGTP):depurinated-DNA purine transferase activity","type":"related"}],"termid":"GO:0047839"}


id: PBO:0034392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-proper_tributary_of","termid":"PBO:0034392"}


id: PBO:0076886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 37","termid":"PBO:0076886"}


id: PBO:0110238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex armadillo-type fold Ipi1","termid":"PBO:0110238"}


id: GO:0000981
data:
  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binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, metal ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, sequence-specific DNA binding","type":"exact"},{"name":"RNA polymerase II transcription factor activity, sequence-specific transcription regulatory region DNA binding","type":"exact"},{"name":"RNA polymerase II transcription factor activity, zinc ion regulated core promoter proximal region sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, zinc ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor 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binding","type":"narrow"},{"name":"transcription factor activity, RNA polymerase II proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity","type":"narrow"}],"termid":"GO:0000981","terms_by_termid":{"GO:0000981":null,"GO:0001227":null,"GO:0001228":null}}


id: PBO:0049956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 2","termid":"PBO:0049956"}


id: PBO:0058794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7515","termid":"PBO:0058794"}


id: PBO:0108683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp7","termid":"PBO:0108683"}


id: GO:0098876
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id: PBO:0049110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 171","termid":"PBO:0049110"}


id: PBO:0030545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_cAMP_level","termid":"PBO:0030545"}


id: PBO:0065514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein prenyltransferase alpha subunit repeat containing 1","termid":"PBO:0065514"}


id: GO:1901729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monensin A.","definition_xrefs":["GOC:yaf","UniPathway:UPA00178","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"monensin A metabolic process","termid":"GO:1901728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"monensin A catabolic process","synonyms":[{"name":"monensin A breakdown","type":"exact"},{"name":"monensin A catabolism","type":"exact"},{"name":"monensin A degradation","type":"exact"},{"name":"monensin breakdown","type":"exact"},{"name":"monensin catabolism","type":"exact"},{"name":"monensin degradation","type":"exact"}],"termid":"GO:1901729"}


id: GO:0070626
data:
  {"annotated_genes":["SJAG_02850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99528],"is_not":false,"summary":null,"term":"GO:0070626"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate = fumarate + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide.","definition_xrefs":["RHEA:23920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:AICARSYN-RXN","EC:4.3.2.2","Reactome:R-HSA-73800","Reactome:R-HSA-73828","KEGG_REACTION:R04559"],"synonyms":[{"name":"(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity","type":"related"},{"name":"SAICAR-lyase (fumarate forming) activity","type":"related"},{"name":"adenylosuccinase activity","type":"broad"},{"name":"adenylosuccinate lyase activity","type":"broad"},{"name":"succino AMP-lyase activity","type":"broad"}],"termid":"GO:0070626","terms_by_termid":{"GO:0070626":null}}


id: PBO:0048910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member E, pseudogene","termid":"PBO:0048910"}


id: GO:0042277
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id: GO:0007501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell fate specification","synonyms":[{"name":"mesoderm cell fate specification","type":"exact"}],"termid":"GO:0007501"}


id: PBO:0041060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 9 pseudogene 2","termid":"PBO:0041060"}


id: GO:0038009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction by the movement of a signaling receptor from the plasma membrane to the inside of the cell. Receptor internalization can have a positive or negative effect on a signaling pathway.","definition_xrefs":["PMID:17011816","PMID:19696798","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of signal transduction by receptor internalization","synonyms":[{"name":"regulation of signaling pathway by receptor endocytosis","type":"exact"}],"termid":"GO:0038009"}


id: PBO:0075631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2A","termid":"PBO:0075631"}


id: PBO:0072784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaffold attachment factor B2","termid":"PBO:0072784"}


id: FYPO:0006145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ions is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:24569997","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion during meiotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper during meiotic cell cycle","type":"exact"},{"name":"decreased RNA level during meiotic cell cycle during copper excess","type":"related"},{"name":"decreased transcript level during cellular response to copper ion during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006145"}


id: GO:2000541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein geranylgeranylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein geranylgeranylation","termid":"GO:2000539"},{"relation_name":"positively_regulates","term_name":"protein geranylgeranylation","termid":"GO:0018344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein geranylgeranylation","synonyms":[{"name":"positive regulation of C-terminal protein geranylgeranylation","type":"related"},{"name":"positive regulation of protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:2000541"}


id: GO:1902569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of activation of JAK (Janus Activated Kinase) kinase activity.","definition_xrefs":["GOC:TermGenie","PMID:16254138"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of activation of Janus kinase activity (obsolete GO:1902569)","synonyms":[{"name":"down-regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"down regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"down regulation of activation of JAK1 protein","type":"narrow"},{"name":"down regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"down regulation of activation of JAK2 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of JAK2 protein","type":"related"},{"name":"down-regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"down-regulation of activation of JAK1 protein","type":"narrow"},{"name":"down-regulation of activation of JAK2 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of JAK2 protein","type":"narrow"},{"name":"downregulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"downregulation of activation of JAK1 protein","type":"narrow"},{"name":"downregulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of JAK2 protein","type":"related"},{"name":"inhibition of activation of JAK1 kinase activity","type":"narrow"},{"name":"inhibition of activation of JAK1 protein","type":"narrow"},{"name":"inhibition of activation of JAK2 kinase activity","type":"narrow"},{"name":"inhibition of activation of JAK2 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of JAK2 protein","type":"related"},{"name":"negative regulation of activation of JAK1 protein","type":"narrow"},{"name":"negative regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"negative regulation of activation of JAK2 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of JAK2 protein","type":"related"}],"termid":"GO:1902569"}


id: GO:0055044
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The interconnected cell membranes and intracellular regions of a plant. The interconnections occur via the plasmodesmata.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symplast","secondary_identifiers":["Wikipedia:Symplast"],"termid":"GO:0055044"}


id: PBO:0059574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 2A","termid":"PBO:0059574"}


id: FYPO:0007564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a Mlu1 cell cycle box (MCB) by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:8223442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription regulatory region sequence-specific DNA binding","termid":"FYPO:0007382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000653","FYPO:0000652"],"is_obsolete":false,"name":"normal DNA binding at MCB","synonyms":[{"name":"normal DNA binding at Mlu1 cell cycle box","type":"exact"},{"name":"normal MCB DNA binding","type":"exact"},{"name":"normal RNA polymerase II proximal promoter sequence-specific DNA binding at MCB","type":"exact"},{"name":"normal RNA polymerase II proximal promoter sequence-specific DNA binding at Mlu1 cell cycle box","type":"exact"}],"termid":"FYPO:0007564"}


id: PBO:0053057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARS2 antisense RNA 1","termid":"PBO:0053057"}


id: GO:0071294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to zinc ion","termid":"GO:0010043"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to zinc ion","synonyms":[{"name":"cellular response to zinc","type":"exact"}],"termid":"GO:0071294"}


id: GO:0080037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cytokinin signaling.","definition_xrefs":["PMID:14973166","GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of cytokinin-activated signaling pathway","termid":"GO:0080036"},{"relation_name":"negatively_regulates","term_name":"cytokinin-activated signaling pathway","termid":"GO:0009736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cytokinin-activated signaling pathway","synonyms":[{"name":"negative regulation of cytokinin mediated signaling pathway","type":"related"},{"name":"negative regulation of cytokinin mediated signalling","type":"exact"}],"termid":"GO:0080037"}


id: GO:0003731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with the 7-methylguanosine cap at the 5' end of a nascent messenger RNA transcript.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cap binding (obsolete GO:0003731)","synonyms":[{"name":"mRNA cap binding","type":"exact"}],"termid":"GO:0003731"}


id: PBO:0003655
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"InVasioN defective","termid":"PBO:0003655"}


id: PBO:0067647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 822, pseudogene","termid":"PBO:0067647"}


id: GO:0018417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 3Fe-2S cluster by tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0293"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide (obsolete GO:0018417)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl L-cysteine persulphido L-glutamato L-histidino L-serinyl nickel triiron disulphide trioxide","type":"exact"}],"termid":"GO:0018417"}


id: GO:0051562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the concentration of calcium ions in mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial calcium ion homeostasis","termid":"GO:0051560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial calcium ion concentration","synonyms":[{"name":"mitochondrial calcium ion concentration reduction","type":"exact"},{"name":"reduction of calcium ion concentration in mitochondria","type":"exact"},{"name":"reduction of calcium ion concentration in mitochondrion","type":"exact"},{"name":"reduction of mitochondrial calcium ion concentration","type":"exact"}],"termid":"GO:0051562"}


id: FYPO:0006094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles is abnormal.","definition_xrefs":["PomBase:mah","GO:0061572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal actin filament bundle organization","termid":"FYPO:0005979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004803","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin filament bundle assembly","synonyms":[{"name":"abnormal actin bundling","type":"exact"},{"name":"abnormal actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament bundle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006094"}


id: PBO:0057608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-5","termid":"PBO:0057608"}


id: PBO:0090758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 2","termid":"PBO:0090758"}


id: GO:0141148
data:
  {"annotated_genes":["SJAG_02007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91054],"is_not":false,"summary":null,"term":"GO:0141148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2,3-saturated acyl-[ACP] + NADP+ = a (2E)-enoyl-[ACP] + H+ + NADPH.","definition_xrefs":["RHEA:22564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enoyl-[acyl-carrier-protein] reductase activity (NAD(P)H)","termid":"GO:0016631"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.3.1.104","MetaCyc:ENOYL-ACP-REDUCT-NADPH-RXN"],"termid":"GO:0141148","terms_by_termid":{"GO:0141148":null}}


id: RO:HOM0000074
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Iterative homology that involves two structures, one of which originated as a duplicate of the other and co-opted the expression of patterning genes of the ancestral structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homocracy_relationship_with","termid":"RO:HOM0000003"},{"relation_name":"is_a","term_name":"in_iterative_homology_relationship_with","termid":"RO:HOM0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paramorphism_relationship_with","synonyms":[{"name":"axis paramorphism","type":"related"}],"termid":"RO:HOM0000074"}


id: GO:0120323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one or more ubiquitin groups are added to a lipid.","definition_xrefs":["GOC:sp","PMID:34012115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification by small protein conjugation","termid":"GO:0120322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid ubiquitination","termid":"GO:0120323"}


id: GO:1902527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein monoubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:21931591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein ubiquitination","termid":"GO:0031398"},{"relation_name":"is_a","term_name":"regulation of protein monoubiquitination","termid":"GO:1902525"},{"relation_name":"positively_regulates","term_name":"protein monoubiquitination","termid":"GO:0006513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein monoubiquitination","synonyms":[{"name":"activation of protein monoubiquitination","type":"narrow"},{"name":"activation of protein monoubiquitinylation","type":"narrow"},{"name":"activation of protein monoubiquitylation","type":"narrow"},{"name":"positive regulation of protein monoubiquitinylation","type":"exact"},{"name":"positive regulation of protein monoubiquitylation","type":"exact"},{"name":"up regulation of protein monoubiquitination","type":"exact"},{"name":"up regulation of protein monoubiquitinylation","type":"exact"},{"name":"up regulation of protein monoubiquitylation","type":"exact"},{"name":"up-regulation of protein monoubiquitination","type":"exact"},{"name":"up-regulation of protein monoubiquitinylation","type":"exact"},{"name":"up-regulation of protein monoubiquitylation","type":"exact"},{"name":"upregulation of protein monoubiquitination","type":"exact"},{"name":"upregulation of protein monoubiquitinylation","type":"exact"},{"name":"upregulation of protein monoubiquitylation","type":"exact"}],"termid":"GO:1902527"}


id: PBO:0071298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 21","termid":"PBO:0071298"}


id: GO:0036369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a sequence-specific DNA-binding transcription factor by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["PMID:22833559","GOC:al","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor catabolic process (obsolete GO:0036369)","synonyms":[{"name":"proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"transcription factor breakdown","type":"exact"},{"name":"transcription factor catabolism","type":"exact"},{"name":"transcription factor degradation","type":"exact"}],"termid":"GO:0036369"}


id: PBO:0056692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic double-stranded break formation protein 4","termid":"PBO:0056692"}


id: PR:Q9US20
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized acyltransferase C1851.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1851.02","synonyms":[{"name":"Spom972h-slc1","type":"exact"}],"termid":"PR:Q9US20"}


id: PBO:0052366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 14","termid":"PBO:0052366"}


id: PBO:0025426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit B-55 Pab1","termid":"PBO:0025426"}


id: PBO:0067978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 280","termid":"PBO:0067978"}


id: PBO:0036470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1 (predicted)","termid":"PBO:0036470"}


id: PBO:0113490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor at START; binds to SBF (Swi4p-Swi6p) at SCB promoter elements in G1 to repress transcription; START inhibitor that retains Cdc28-Cln3 at the ER; acts with Ydj1p to promote release of the complex in a growth-mediated positive feedback loop to trigger START; unstable and degraded by SCF-Grr1 after phosphorylation; contains a G1/S transcription factor binding (GTB) motif; binds SBF-regulated promoters in HU-treated cells; substrate of Cdc28p and Pho85p; hyperphosphorylated","termid":"PBO:0113490"}


id: GO:0046065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dCTP, deoxycytidine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dCTP metabolic process","synonyms":[{"name":"dCTP metabolism","type":"exact"}],"termid":"GO:0046065"}


id: GO:0052811
data:
  {"annotated_genes":["SJAG_01863"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87867],"is_not":false,"summary":null,"term":"GO:0052811"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + ADP + H+.","definition_xrefs":["PMID:9367159","PMID:9211928","PMID:9660759","RHEA:63688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01863":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 4-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1676145","MetaCyc:RXN-10957"],"synonyms":[{"name":"phosphatidylinositol 3-phosphate 4-kinase activity","type":"exact"}],"termid":"GO:0052811","terms_by_termid":{"GO:0052811":null}}


id: PR:P13681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dis2 gene.","definition_xrefs":["UniProtKB:P13681","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase PP1-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.02c","synonyms":[{"name":"Spom972h-dis2","type":"exact"}],"termid":"PR:P13681"}


id: FYPO:0002756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cysteine synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal cysteine synthase activity","termid":"FYPO:0002754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000661","FYPO:0000707","FYPO:0005447","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"increased cysteine synthase activity","termid":"FYPO:0002756"}


id: PBO:0045438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like C-mannosyltransferase 3","termid":"PBO:0045438"}


id: GO:0010028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cyclic series of interconversions involving three xanthophylls, violoxanthin, antheraxanthin, and zeaxanthin. The xanthophyll cycle is involved in regulating energy dissipation in light harvesting complex II.","definition_xrefs":["ISBN:0122146743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"xanthophyll cycle","secondary_identifiers":["MetaCyc:PWY-5945","Wikipedia:Xanthophyll#Xanthophyll_cycle"],"termid":"GO:0010028"}


id: PBO:0112792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CCNDBP1 ortholog, may coordinate transcription elongation and splicing based on human interactions","termid":"PBO:0112792"}


id: GO:0004401
data:
  {"annotated_genes":["SJAG_00248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111176],"is_not":false,"summary":null,"term":"GO:0004401"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidinol phosphate + H2O = L-histidinol + phosphate.","definition_xrefs":["EC:3.1.3.15","RHEA:14465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"histidinol-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03013","MetaCyc:HISTIDPHOS-RXN"],"synonyms":[{"name":"HPpase activity","type":"related"},{"name":"L-histidinol phosphate phosphatase activity","type":"related"},{"name":"L-histidinol-phosphate phosphohydrolase activity","type":"related"},{"name":"histidinol phosphate phosphatase activity","type":"related"},{"name":"histidinolphosphatase activity","type":"related"},{"name":"histidinolphosphate phosphatase activity","type":"related"}],"termid":"GO:0004401","terms_by_termid":{"GO:0004401":null}}


id: GO:0018642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the addition or substitution of an OH group on C4 of a halogenated phenol.","definition_xrefs":["UM-BBD_enzymeID:e0252"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorophenol 4-monooxygenase activity (obsolete GO:0018642)","termid":"GO:0018642"}


id: GO:0140466
data:
  {"annotated_genes":["SJAG_02457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85307],"is_not":false,"summary":null,"term":"GO:0140466"}]},"cv_name":"biological_process","definition":"The directed movement of iron sulfur clusters from inside the mitochondrion into the cytosol by crossing the inner mitochondrial membrane.","definition_xrefs":["PMID:31040179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster transmembrane transport","termid":"GO:1902497"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"iron-sulfur cluster export from the mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140466","terms_by_termid":{"GO:0140466":null}}


id: GO:0120233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to prenyl-FMNH2, a flavin mononucleotide obtained by prenylation of the N-10 position of FMNH2 followed by cyclisation. An essential cofactor for the decarboxylase enzymes UbiD and Fdc1.","definition_xrefs":["PMID:26083743","GOC:krc","PMID:26083754","PMID:25647642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleotide binding","termid":"GO:0032553"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"prenyl-FMNH2 binding","synonyms":[{"name":"prenylated FMNH2 binding","type":"exact"}],"termid":"GO:0120233"}


id: GO:1900562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dehydroaustinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"dehydroaustinol metabolic process","termid":"GO:1900561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"dehydroaustinol catabolic process","synonyms":[{"name":"dehydroaustinol breakdown","type":"exact"},{"name":"dehydroaustinol catabolism","type":"exact"},{"name":"dehydroaustinol degradation","type":"exact"}],"termid":"GO:1900562"}


id: PBO:0028510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_domain","termid":"PBO:0028510"}


id: GO:0014853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, involved in skeletal muscle contraction, that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP). Excitatory postsynaptic potential (EPSP) is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"part_of","term_name":"skeletal muscle contraction","termid":"GO:0003009"},{"relation_name":"part_of","term_name":"regulation of skeletal muscle contraction by neural stimulation via neuromuscular junction","termid":"GO:0014852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of excitatory postsynaptic membrane potential involved in skeletal muscle contraction","synonyms":[{"name":"regulation of excitatory post-synaptic membrane potential involved in skeletal muscle contraction","type":"exact"}],"termid":"GO:0014853"}


id: PBO:0067036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 50, pseudogene","termid":"PBO:0067036"}


id: PBO:0052027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jupiter microtubule associated homolog 1","termid":"PBO:0052027"}


id: PBO:0077162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 3, transcriptional corepressor","termid":"PBO:0077162"}


id: GO:0070077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the removal of a methyl group from an arginine residue.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone arginine demethylation (obsolete GO:0070077)","termid":"GO:0070077"}


id: PBO:0063399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 11","termid":"PBO:0063399"}


id: PBO:0056548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanin concentrating hormone receptor 2","termid":"PBO:0056548"}


id: PBO:0045669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 heavy chain 1","termid":"PBO:0045669"}


id: PR:O94579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04818","PANTHER:PTHR11599:SF16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.06","secondary_identifiers":["UniProtKB:O94579"],"synonyms":[{"name":"Spom972h-PSMA2","type":"exact"}],"termid":"PR:O94579"}


id: GO:0060249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state within a defined anatomical structure of an organism, including control of cellular proliferation and death and control of metabolic function. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure homeostasis","synonyms":[{"name":"anatomical structure maintenance","type":"exact"}],"termid":"GO:0060249"}


id: PBO:0042789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 164","termid":"PBO:0042789"}


id: MOD:01725
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01725"}


id: GO:1903343
data:
  {"annotated_genes":["SJAG_03048","SJAG_00100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98473,104485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic DNA double-strand break formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25103240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation","termid":"GO:1903341"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of meiotic DNA double-strand break formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiotic DNA double-strand break formation","type":"narrow"},{"name":"up regulation of meiotic DNA double-strand break formation","type":"exact"},{"name":"up-regulation of meiotic DNA double-strand break formation","type":"exact"},{"name":"upregulation of meiotic DNA double-strand break formation","type":"exact"}],"termid":"GO:1903343","terms_by_termid":{"GO:1905263":null}}


id: PBO:0071374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 33","termid":"PBO:0071374"}


id: PBO:0003967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein Oca3/ ER membrane protein complex Ecm2 (predicted)","termid":"PBO:0003967"}


id: GO:0019674
data:
  {"annotated_genes":["SJAG_03091","SJAG_01566","SJAG_01012","SJAG_04495","SJAG_04334","SJAG_01310","SJAG_00839","SJAG_04693","SJAG_02107","SJAG_00957","SJAG_01500","SJAG_03298","SJAG_03903","SJAG_02945","SJAG_00409","SJAG_04192","SJAG_02889","SJAG_02618","SJAG_00461","SJAG_01539","SJAG_01582","SJAG_03946","SJAG_02369","SJAG_06622","SJAG_03373","SJAG_02135","SJAG_04152","SJAG_02009","SJAG_01359","SJAG_03660","SJAG_02796","SJAG_00605","SJAG_00027","SJAG_06621","SJAG_03828"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87940,92516,93540],"is_not":false,"summary":null,"term":"GO:0019674"},{"annotations":[90567,105525,99753,101574,94066,101939,105057,99491,101573,91058,105056,105062,100580,105060,105059,105061,105522,105058,101940,105523,101575,105526,105527,94346,105524,112522,105521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[86681,109246,95422,87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[96146,113475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[101226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[85052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[101227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[102615,90021,109008,92784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide adenine dinucleotide (NAD), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.","definition_xrefs":["ISBN:0618254153","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_01539":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02618":null,"SJAG_02796":null,"SJAG_02889":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03298":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03946":null,"SJAG_04152":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04693":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"NAD metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD (oxidized) metabolic process","type":"exact"},{"name":"NAD (oxidized) metabolism","type":"exact"},{"name":"NAD metabolism","type":"exact"},{"name":"NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"oxidized NAD metabolic process","type":"exact"},{"name":"oxidized NAD metabolism","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:0019674","terms_by_termid":{"GO:0006116":null,"GO:0006734":null,"GO:0009435":null,"GO:0019674":null,"GO:0019677":null,"GO:0034355":null,"GO:0034356":null,"GO:0061621":null}}


id: PBO:0080312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 76 pseudogene","termid":"PBO:0080312"}


id: PBO:0070618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 2","termid":"PBO:0070618"}


id: PBO:0046565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 7","termid":"PBO:0046565"}


id: GO:1904007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phospholipase D activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:11211872"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phospholipase D activity (obsolete GO:1904007)","synonyms":[{"name":"activation of choline phosphatase activity","type":"narrow"},{"name":"activation of lecithinase D activity","type":"narrow"},{"name":"activation of lipophosphodiesterase II activity","type":"narrow"},{"name":"activation of phosphatidylcholine phosphatidohydrolase activity","type":"narrow"},{"name":"activation of phospholipase D activity","type":"narrow"},{"name":"positive regulation of choline phosphatase activity","type":"exact"},{"name":"positive regulation of lecithinase D activity","type":"exact"},{"name":"positive regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"positive regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up regulation of choline phosphatase activity","type":"exact"},{"name":"up regulation of lecithinase D activity","type":"exact"},{"name":"up regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"up regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up regulation of phospholipase D activity","type":"exact"},{"name":"up-regulation of choline phosphatase activity","type":"exact"},{"name":"up-regulation of lecithinase D activity","type":"exact"},{"name":"up-regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"up-regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up-regulation of phospholipase D activity","type":"exact"},{"name":"upregulation of choline phosphatase activity","type":"exact"},{"name":"upregulation of lecithinase D activity","type":"exact"},{"name":"upregulation of lipophosphodiesterase II activity","type":"exact"},{"name":"upregulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"upregulation of phospholipase D activity","type":"exact"}],"termid":"GO:1904007"}


id: RO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c has-chemical-role r iff c has-role r and r is a chemical role (CHEBI:51086)","direct_ancestors":[{"relation_name":"is_a","term_name":"has_role","termid":"RO:0000087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_chemical_role","termid":"RO:0002262"}


id: PBO:0071308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 31","termid":"PBO:0071308"}


id: FYPO:0007394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of one or more RNA molecules differs from normal.","definition_xrefs":["PMID:24793650","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal RNA structure","synonyms":[{"name":"abnormal RNA secondary structure","type":"narrow"}],"termid":"FYPO:0007394"}


id: PBO:0061367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 27","termid":"PBO:0061367"}


id: GO:0014053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid secretion","termid":"GO:0014052"},{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"down regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid secretion","type":"narrow"},{"name":"negative regulation of GABA secretion","type":"exact"}],"termid":"GO:0014053"}


id: PBO:0028424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_actomyosin_contractile_ring,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028424"}


id: GO:0045853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bicoid mRNA localization","termid":"GO:0008359"},{"relation_name":"is_a","term_name":"negative regulation of intracellular mRNA localization","termid":"GO:1904581"},{"relation_name":"negatively_regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bicoid mRNA localization","synonyms":[{"name":"down regulation of bicoid mRNA localization","type":"exact"},{"name":"down-regulation of bicoid mRNA localization","type":"exact"},{"name":"downregulation of bicoid mRNA localization","type":"exact"},{"name":"inhibition of bicoid mRNA localization","type":"narrow"},{"name":"negative regulation of bicoid mRNA localisation","type":"exact"}],"termid":"GO:0045853"}


id: PBO:0003395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Nop56 (predicted)","termid":"PBO:0003395"}


id: PBO:0069025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 270, pseudogene","termid":"PBO:0069025"}


id: PBO:0086602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is induced by activation of the HOG1 mitogen-activated signaling pathway and this induction is Hog1p/Pbs2p dependent; YJL107C and adjacent ORF, YJL108C are merged in related fungi","termid":"PBO:0086602"}


id: PBO:0070239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 179 pseudogene","termid":"PBO:0070239"}


id: MOD:01031
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylbenzyl","synonyms":[{"name":"diMeBzl","type":"exact"}],"termid":"MOD:01031"}


id: PBO:0071651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 15","termid":"PBO:0071651"}


id: PBO:0052694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 2","termid":"PBO:0052694"}


id: PBO:0002710
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.71","termid":"PBO:0002710"}


id: SO:0000369
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000369 integrase_coding_region (obsolete SO:0000369)","termid":"SO:0000369"}


id: PBO:0064766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase H","termid":"PBO:0064766"}


id: PBO:0113211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein, ERMES complex subunit; required for transmission of mitochondria to daughter cells; required for mitophagy; may influence import and assembly of outer membrane beta-barrel proteins; localizes to mitochondria–ER contact sites; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0113211"}


id: PBO:0083378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps 5' end of the verified, essential gene YAH1/YPL252C","termid":"PBO:0083378"}


id: GO:0019314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.","definition_xrefs":["GOC:ai","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-allose metabolic process","synonyms":[{"name":"D-allose metabolism","type":"exact"}],"termid":"GO:0019314"}


id: GO:0160152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(31) in tRNA = pseudouridine(31) in tRNA.","definition_xrefs":["EC:5.4.99.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140098","GO:0140101","GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"tRNA pseudouridine(31) synthase activity","secondary_identifiers":["RHEA:42552"],"termid":"GO:0160152"}


id: PBO:0089102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15a","termid":"PBO:0089102"}


id: PBO:0040270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATM interactor","termid":"PBO:0040270"}


id: GO:0015566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of acriflavin from one side of a membrane to the other. Acriflavin is a fluorescent dye used as a local antiseptic and also as a biological stain. It intercalates into nucleic acids thereby inhibiting bacterial and viral replication.","definition_xrefs":["PubChem_Compound:6842"],"gene_count":0,"genotype_count":0,"name":"obsolete acriflavine transmembrane transporter activity (obsolete GO:0015566)","synonyms":[{"name":"acriflavin resistant pump activity","type":"related"},{"name":"acriflavin transporter activity","type":"related"},{"name":"acriflavine transporter activity","type":"related"}],"termid":"GO:0015566"}


id: PBO:0084589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YDR474C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YDR475C","termid":"PBO:0084589"}


id: PBO:0079578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 B","termid":"PBO:0079578"}


id: PBO:0042554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 17","termid":"PBO:0042554"}


id: GO:0004444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The removal of a phosphate group from the carbon-1 position of D-myo-inositol 1,4,5-trisphosphate.","definition_xrefs":["GOC:hb","EC:3.1.3.61"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-1,4,5-trisphosphate 1-phosphatase (obsolete GO:0004444)","synonyms":[{"name":"inositol-1,4,5-trisphosphate 1-phosphatase","type":"exact"}],"termid":"GO:0004444"}


id: GO:1904786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of asymmetric protein localization involved in cell fate determination.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17476329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of asymmetric protein localization involved in cell fate determination","termid":"GO:1904785"},{"relation_name":"negatively_regulates","term_name":"asymmetric protein localization involved in cell fate determination","termid":"GO:0045167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asymmetric protein localization involved in cell fate determination","synonyms":[{"name":"down regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"down regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"down regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"down regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"down regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"down-regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"down-regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"down-regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"down-regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"down-regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"downregulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"downregulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"downregulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"downregulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"downregulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"inhibition of asymmetric protein localisation involved in cell fate determination","type":"narrow"},{"name":"inhibition of asymmetric protein localization involved in cell fate commitment","type":"narrow"},{"name":"inhibition of asymmetric protein localization involved in cell fate determination","type":"narrow"},{"name":"inhibition of asymmetric protein localization resulting in cell fate commitment","type":"narrow"},{"name":"inhibition of cell fate commitment, asymmetric protein localization","type":"narrow"},{"name":"negative regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"negative regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"negative regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"negative regulation of cell fate commitment, asymmetric protein localization","type":"exact"}],"termid":"GO:1904786"}


id: PBO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1 (predicted)","termid":"PBO:0005136"}


id: PBO:0035860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_protein_movement_within_plasma_membrane_at_cell_tip","termid":"PBO:0035860"}


id: PBO:0078057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 47","termid":"PBO:0078057"}


id: PBO:0061534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMDA receptor synaptonuclear signaling and neuronal migration factor","termid":"PBO:0061534"}


id: GO:0040029
data:
  {"annotated_genes":["SJAG_03982","SJAG_04755","SJAG_02869","SJAG_04038","SJAG_03128","SJAG_03047","SJAG_04574","SJAG_02594","SJAG_03945","SJAG_02066","SJAG_00184","SJAG_03668","SJAG_02622","SJAG_01016","SJAG_03431","SJAG_00349","SJAG_03758","SJAG_04613","SJAG_04576","SJAG_05313","SJAG_02329","SJAG_03394","SJAG_02817","SJAG_02589","SJAG_04141","SJAG_00873","SJAG_00896","SJAG_07011","SJAG_01938","SJAG_00266","SJAG_02990","SJAG_04030","SJAG_00302","SJAG_03664","SJAG_00883","SJAG_00934","SJAG_02466","SJAG_00584","SJAG_03042","SJAG_01540","SJAG_02382","SJAG_01873","SJAG_00743","SJAG_05192","SJAG_01465","SJAG_03627","SJAG_04389","SJAG_01599","SJAG_01610","SJAG_02576","SJAG_00045","SJAG_02927","SJAG_00641","SJAG_04213","SJAG_00142","SJAG_05020","SJAG_02254","SJAG_04253","SJAG_01611","SJAG_04274","SJAG_00320","SJAG_02381","SJAG_02500","SJAG_03599","SJAG_02872","SJAG_01926","SJAG_01804","SJAG_03916","SJAG_03356","SJAG_02385","SJAG_01331","SJAG_01075","SJAG_04186","SJAG_02906","SJAG_02592","SJAG_03635","SJAG_01511","SJAG_03944","SJAG_01475","SJAG_04758","SJAG_04205","SJAG_01513","SJAG_02416","SJAG_03118","SJAG_00868","SJAG_02908","SJAG_04989","SJAG_04005","SJAG_01653","SJAG_02571","SJAG_03689","SJAG_02778","SJAG_04194","SJAG_01675","SJAG_03752","SJAG_00769","SJAG_01622","SJAG_02723","SJAG_00335","SJAG_02119","SJAG_04039","SJAG_00087","SJAG_01046","SJAG_03694","SJAG_02798","SJAG_02314","SJAG_01325","SJAG_02409","SJAG_01823","SJAG_02621","SJAG_00160","SJAG_04879","SJAG_03680","SJAG_02846","SJAG_02725","SJAG_02549","SJAG_02981","SJAG_01579","SJAG_03366","SJAG_01230","SJAG_03844","SJAG_04097","SJAG_01745","SJAG_01836","SJAG_01878","SJAG_03145","SJAG_02701","SJAG_01867","SJAG_03441","SJAG_04942","SJAG_04369","SJAG_03576","SJAG_01111","SJAG_02458","SJAG_02170","SJAG_01711","SJAG_03033","SJAG_02401","SJAG_02319","SJAG_00739","SJAG_03193","SJAG_02698","SJAG_00756","SJAG_00676","SJAG_04061","SJAG_03884","SJAG_00293","SJAG_03579","SJAG_03255","SJAG_02311","SJAG_04396","SJAG_01658","SJAG_00735","SJAG_03543","SJAG_04768","SJAG_02768","SJAG_03787","SJAG_02541","SJAG_00414","SJAG_01110","SJAG_03942","SJAG_00440","SJAG_01601","SJAG_03776","SJAG_00701","SJAG_02773","SJAG_00746","SJAG_02165","SJAG_02303","SJAG_03006","SJAG_00961","SJAG_02447","SJAG_03997","SJAG_00341","SJAG_01008","SJAG_00441","SJAG_00581","SJAG_04596","SJAG_03839","SJAG_00058","SJAG_03624","SJAG_02342"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87260,89423,93286,100302,105597,108254,112381,115017],"is_not":false,"summary":null,"term":"GO:0040029"},{"annotations":[109760,107410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140719"},{"annotations":[90119,99328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140718"},{"annotations":[98098,95202,84192,95228,98097,99329,94981,99162,90120,109213,108762,98096,111416,108761,92216,108760,113300,86786,113933],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033696"},{"annotations":[86787,108763,111165,100304,105598,88625,87293,100206,108357,108764,100303,98101,106081,111570,98100,115606,113887,110276,90650,87811,90391,110146,98099,115605,108765,98503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031507"},{"annotations":[89229,93287,93400,89267,99223,110303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045814"},{"annotations":[102765],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061188"},{"annotations":[104620],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060906"},{"annotations":[108771,86083,108358,109450,86242,89479,104291,110149,107413,110577,87294,92795,94334,98106,95208,98107,99331,108255,108769,88095,98882,90122,100207,88854,98105,106623,108770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031508"},{"annotations":[87369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140462"},{"annotations":[95041],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031453"},{"annotations":[87207],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090053"},{"annotations":[87208,106480,90414],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090055"},{"annotations":[103361,108256,109451,100208,104292,110578,88096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000183"},{"annotations":[94643,86841],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031445"},{"annotations":[93256,96384],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090052"},{"annotations":[113934],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010964"},{"annotations":[113935,96385,114290,87886,93257],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"},{"annotations":[110723,103479,114266,114157,108009,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process that modulates the frequency, rate or extent of gene expression through chromatin remodeling either by modifying higher order chromatin fiber structure, nucleosomal histones, or cytosine methylation of DNA. Once established, this regulation may be maintained over many cell divisions. It can also be heritable in the absence of the instigating signal.","definition_xrefs":["PMID:11498582","PMID:10521337","PMID:34414474","PMID:22243696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"}],"gene_count":182,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00058":null,"SJAG_00087":null,"SJAG_00142":null,"SJAG_00160":null,"SJAG_00184":null,"SJAG_00266":null,"SJAG_00293":null,"SJAG_00302":null,"SJAG_00320":null,"SJAG_00335":null,"SJAG_00341":null,"SJAG_00349":null,"SJAG_00414":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00676":null,"SJAG_00701":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00756":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00873":null,"SJAG_00883":null,"SJAG_00896":null,"SJAG_00934":null,"SJAG_00961":null,"SJAG_01008":null,"SJAG_01016":null,"SJAG_01046":null,"SJAG_01075":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01331":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01511":null,"SJAG_01513":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01599":null,"SJAG_01601":null,"SJAG_01610":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01675":null,"SJAG_01711":null,"SJAG_01745":null,"SJAG_01804":null,"SJAG_01823":null,"SJAG_01836":null,"SJAG_01867":null,"SJAG_01873":null,"SJAG_01878":null,"SJAG_01926":null,"SJAG_01938":null,"SJAG_02066":null,"SJAG_02119":null,"SJAG_02165":null,"SJAG_02170":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02311":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02329":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02382":null,"SJAG_02385":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02416":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02576":null,"SJAG_02589":null,"SJAG_02592":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02698":null,"SJAG_02701":null,"SJAG_02723":null,"SJAG_02725":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02778":null,"SJAG_02798":null,"SJAG_02817":null,"SJAG_02846":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02908":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_02990":null,"SJAG_03006":null,"SJAG_03033":null,"SJAG_03042":null,"SJAG_03047":null,"SJAG_03118":null,"SJAG_03128":null,"SJAG_03145":null,"SJAG_03193":null,"SJAG_03255":null,"SJAG_03356":null,"SJAG_03366":null,"SJAG_03394":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03543":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03624":null,"SJAG_03627":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03668":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03694":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03844":null,"SJAG_03884":null,"SJAG_03916":null,"SJAG_03942":null,"SJAG_03944":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04005":null,"SJAG_04030":null,"SJAG_04038":null,"SJAG_04039":null,"SJAG_04061":null,"SJAG_04097":null,"SJAG_04141":null,"SJAG_04186":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04253":null,"SJAG_04274":null,"SJAG_04369":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04574":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04768":null,"SJAG_04879":null,"SJAG_04942":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05313":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"epigenetic regulation of gene expression","references_by_uniquename":{"GO_REF:0000107":null,"PMID:35226668":null},"synonyms":[{"name":"regulation of gene expression, epigenetic","type":"exact"}],"termid":"GO:0040029","terms_by_termid":{"GO:0000183":null,"GO:0010964":null,"GO:0030466":null,"GO:0031048":null,"GO:0031445":null,"GO:0031453":null,"GO:0031507":null,"GO:0031508":null,"GO:0031509":null,"GO:0033696":null,"GO:0040029":null,"GO:0045814":null,"GO:0045815":null,"GO:0060906":null,"GO:0061188":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:0140462":null,"GO:0140718":null,"GO:0140719":null,"GO:0140727":null,"GO:0141005":null,"GO:0141194":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: PBO:0108576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 and Rpd3L histone deacetylase complex LCCL domain subunit Rxt3","termid":"PBO:0108576"}


id: PBO:0071819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 14","termid":"PBO:0071819"}


id: PR:O94458
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized derlin-like protein C1687.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.17c","synonyms":[{"name":"Spom972h-SPAC1687.17c","type":"exact"}],"termid":"PR:O94458"}


id: GO:0043336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a site-specific breakage and reunion reaction that generates two hairpin telomeres from a replicated telomere substrate. Occurs via a two-step transesterification with a protein-DNA intermediate similar to that used by topoisomerases and site-specific recombinases.","definition_xrefs":["PMID:11804598","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"site-specific telomere resolvase activity","synonyms":[{"name":"ResT","type":"narrow"},{"name":"TelN","type":"narrow"}],"termid":"GO:0043336"}


id: GO:0080068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylthiopentyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 5-methylthiopentyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desulfoglucosinolate sulfotransferase activity","termid":"GO:0047364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4330"],"termid":"GO:0080068"}


id: PBO:0084064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0084064"}


id: PBO:0028289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cadmium_ion_import_into_vacuole","termid":"PBO:0028289"}


id: GO:1903474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that maintains the mitotic actinomyosin contractile ring at the plasma membrane.","definition_xrefs":["GOC:vw","GOC:mtg_cell_cycle","PMID:19139265","PMID:28784611","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete anchoring of the mitotic actomyosin contractile ring to the plasma membrane (obsolete GO:1903474)","synonyms":[{"name":"cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903474"}


id: PBO:0028009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_during_meiotic_cell_cycle","termid":"PBO:0028009"}


id: PBO:0053493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 471","termid":"PBO:0053493"}


id: GO:0008290
data:
  {"annotated_genes":["SJAG_01894","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84289,94968],"is_not":false,"summary":null,"term":"GO:0008290"}]},"cv_name":"cellular_component","definition":"A heterodimer consisting of alpha and beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments.","definition_xrefs":["ISBN:0198599560","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01894":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"F-actin capping protein complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008290","terms_by_termid":{"GO:0008290":null}}


id: GO:0035727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lysophosphatidic acid (LPA), a phospholipid derivative that acts as a potent mitogen due to its activation of high-affinity G protein-coupled receptors.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"lysophosphatidic acid binding","synonyms":[{"name":"LPA binding","type":"exact"}],"termid":"GO:0035727"}


id: PR:Q9UUC1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUC1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.03c","synonyms":[{"name":"Spom972h-rpl2101","type":"exact"}],"termid":"PR:Q9UUC1"}


id: PBO:0000440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc2/Med1","termid":"PBO:0000440"}


id: GO:0047317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 3-amino-6-acetamidohexanoate = L-glutamate + 3-oxo-6-acetamidohexanoate.","definition_xrefs":["MetaCyc:2.6.1.65-RXN","EC:2.6.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N6-acetyl-beta-lysine transaminase activity","secondary_identifiers":["RHEA:16889"],"synonyms":[{"name":"6-acetamido-3-aminohexanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"N(6)-acetyl-beta-lysine aminotransferase activity","type":"related"},{"name":"N6-acetyl-beta-lysine aminotransferase activity","type":"exact"},{"name":"epsilon-acetyl-beta-lysine aminotransferase activity","type":"related"}],"termid":"GO:0047317"}


id: PBO:0074276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRA stem-loop interacting RNA binding protein","termid":"PBO:0074276"}


id: GO:0061697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N(6)-glutaryl-L-lysyl-[protein] + NAD+ = 2''-O-glutaryl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["GOC:dph","PMID:24703693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016810","GO:0140096","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"protein-glutaryllysine deglutarylase activity","secondary_identifiers":["RHEA:47664"],"termid":"GO:0061697"}


id: FYPO:0006606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to a specific place in the cell shows an abnormal temporal pattern of localization. For example, a protein may move to or from the location more or less frequently than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal dynamic protein localization pattern","synonyms":[{"name":"abnormal dynamic pattern of protein localization","type":"exact"},{"name":"abnormal dynamic protein localisation pattern","type":"exact"},{"name":"abnormal protein exchange","type":"exact"},{"name":"abnormal protein turnover","type":"exact"},{"name":"abnormal temporal protein localization pattern","type":"related"}],"termid":"FYPO:0006606"}


id: SO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds in which: the main-chain NH of residue(i) is H-bonded to the main-chain CO of residue(i+4), the main-chain CO of residue i is H-bonded to the main-chain NH of residue(i+3), these loops have an RL nest at residues i+2 and i+3.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_bulge_loop","termid":"SO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop_five","secondary_identifiers":["BS:00210"],"synonyms":[{"name":"beta bulge loop five","type":"exact"}],"termid":"SO:0001109"}


id: PBO:0077836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophoblast glycoprotein","termid":"PBO:0077836"}


id: PBO:0084923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monoglyceride lipase (MGL) that hydrolyzes fatty acid ethyl esters; required for removal of toxic metabolites in ethanol producing yeast cells; localizes to lipid particles and membranes; member of the eukaryotic serine hydrolase family; functional ortholog of mammalian MGL","termid":"PBO:0084923"}


id: PR:Q9P7J0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.16c","synonyms":[{"name":"Spom972h-SPCC24B10.16c","type":"exact"}],"termid":"PR:Q9P7J0"}


id: PBO:0039565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 61","termid":"PBO:0039565"}


id: PBO:0078558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 46","termid":"PBO:0078558"}


id: PR:O43009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug110 gene.","definition_xrefs":["UniProtKB:O43009","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 110 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.10c","synonyms":[{"name":"Spom972h-mug110","type":"exact"}],"termid":"PR:O43009"}


id: PBO:0051092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 3","termid":"PBO:0051092"}


id: PBO:0004001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein modifier Ned8","termid":"PBO:0004001"}


id: PBO:0074819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18B","termid":"PBO:0074819"}


id: PBO:0083262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 1% of ORF overlaps the verified gene SNU56; diploid mutant displays a weak budding pattern phenotype in a systematic assay","termid":"PBO:0083262"}


id: GO:0006900
data:
  {"annotated_genes":["SJAG_00284","SJAG_01242","SJAG_01516","SJAG_04643","SJAG_04391","SJAG_03268","SJAG_05207","SJAG_03907","SJAG_02539","SJAG_05345","SJAG_03558","SJAG_03153","SJAG_01748","SJAG_00416","SJAG_00072","SJAG_05344","SJAG_02349"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83993,99847,102139,102675,111034],"is_not":false,"summary":null,"term":"GO:0006900"},{"annotations":[113922,89257],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91566],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[102682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090114"},{"annotations":[112767,106343,74001,70462,89393,108125,108865],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090110"},{"annotations":[94792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048194"}]},"cv_name":"biological_process","definition":"The evagination of a membrane, resulting in formation of a vesicle.","definition_xrefs":["GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00416":null,"SJAG_01242":null,"SJAG_01516":null,"SJAG_01748":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03268":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04391":null,"SJAG_04643":null,"SJAG_05207":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"vesicle budding from membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902591","GO:0006902"],"synonyms":[{"name":"membrane evagination","type":"exact"},{"name":"nonselective vesicle assembly","type":"related"},{"name":"single organism membrane budding","type":"related"},{"name":"single-organism membrane budding","type":"related"},{"name":"vesicle biosynthesis","type":"exact"},{"name":"vesicle budding","type":"related"},{"name":"vesicle formation","type":"exact"}],"termid":"GO:0006900","terms_by_termid":{"GO:0006900":null,"GO:0048194":null,"GO:0048205":null,"GO:0048208":null,"GO:0090110":null,"GO:0090114":null}}


id: GO:0048834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the number of petals formed in a flower.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of floral organ number","termid":"GO:0048833"},{"relation_name":"part_of","term_name":"corolla development","termid":"GO:0048465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of petal number","termid":"GO:0048834"}


id: SO:0000287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a fusion.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"fusion","termid":"SO:0000806"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion_gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Fusion_gene"],"synonyms":[{"name":"fusion gene","type":"exact"}],"termid":"SO:0000287"}


id: PBO:0058343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4716","termid":"PBO:0058343"}


id: PBO:0068353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 133","termid":"PBO:0068353"}


id: GO:0031580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that establishes the spatial arrangement of membrane rafts within a cellular membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft organization","termid":"GO:0031579"},{"relation_name":"is_a","term_name":"membrane raft localization","termid":"GO:0051665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane raft distribution","synonyms":[{"name":"lipid raft distribution","type":"exact"}],"termid":"GO:0031580"}


id: PBO:0017612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Glc8 (predicted)","termid":"PBO:0017612"}


id: GO:0070796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cleistothecium development","termid":"GO:0070796"}


id: GO:0043404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with corticotropin-releasing hormone and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["PMID:11027914","GOC:signaling","ISBN:0838577016","PMID:15134857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"corticotropin-releasing hormone receptor activity","secondary_identifiers":["GO:0031636"],"synonyms":[{"name":"CRF receptor activity","type":"exact"},{"name":"CRH receptor activity","type":"exact"},{"name":"adrenocorticotropin-releasing hormone receptor activity","type":"exact"},{"name":"corticotropin-releasing factor receptor activity","type":"exact"}],"termid":"GO:0043404"}


id: PBO:0048284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 18","termid":"PBO:0048284"}


id: PR:O94724
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1393.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1393.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.12","synonyms":[{"name":"Spom972h-SPCC1393.12","type":"exact"}],"termid":"PR:O94724"}


id: GO:0021666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 5. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 5 morphogenesis","termid":"GO:0021664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 formation","termid":"GO:0021666"}


id: RO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between between a receptor and an chemical entity, typically a small molecule or peptide, that carries information between cells or compartments of a cell and which binds the receptor and regulates its effector function.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_ligand","termid":"RO:0002019"}


id: PATO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000746 consumption value (obsolete PATO:0000746)","termid":"PATO:0000746"}


id: GO:0046318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosylceramide.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucosylceramide biosynthetic process","termid":"GO:0046317"},{"relation_name":"is_a","term_name":"negative regulation of ceramide biosynthetic process","termid":"GO:1900060"},{"relation_name":"negatively_regulates","term_name":"glucosylceramide biosynthetic process","termid":"GO:0006679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of glucosylceramide biosynthetic process","synonyms":[{"name":"down regulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"down-regulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"downregulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"inhibition of glucosylceramide biosynthetic process","type":"narrow"},{"name":"negative regulation of glucosylceramide anabolism","type":"exact"},{"name":"negative regulation of glucosylceramide biosynthesis","type":"exact"},{"name":"negative regulation of glucosylceramide formation","type":"exact"},{"name":"negative regulation of glucosylceramide synthesis","type":"exact"}],"termid":"GO:0046318"}


id: PBO:0004226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic proline-tRNA ligase Prs1 (predicted)","termid":"PBO:0004226"}


id: PBO:0070668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 39","termid":"PBO:0070668"}


id: PBO:0036186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036186"}


id: PBO:0069041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 286, pseudogene","termid":"PBO:0069041"}


id: GO:0015611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-ribose(out) = ADP + phosphate + D-ribose(in).","definition_xrefs":["RHEA:29903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"},{"relation_name":"is_a","term_name":"D-ribose transmembrane transporter activity","termid":"GO:0015591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type D-ribose transporter activity","secondary_identifiers":["EC:7.5.2.7","MetaCyc:ABC-28-RXN"],"synonyms":[{"name":"D-ribose porter activity","type":"broad"},{"name":"D-ribose-importing ATPase activity","type":"related"}],"termid":"GO:0015611"}


id: GO:0060616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland cord forms by elongation of the mammary bud. The cord is formed once the elongating bud breaks through the mesenchyme and reaches the fat pad.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland cord formation","synonyms":[{"name":"mammary gland sprout formation","type":"exact"}],"termid":"GO:0060616"}


id: PBO:0087470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of ATP-dependent Isw2p-Itc1p chromatin remodeling complex; required for repression of a-specific genes, repression of early meiotic genes during mitotic growth, and repression of INO1; similar to mammalian Acf1p, the regulatory subunit of the mammalian ATP-utilizing chromatin assembly and modifying factor (ACF) complex; ITC1 has a paralog, YPL216W, that arose from the whole genome duplication","termid":"PBO:0087470"}


id: PBO:0053268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A2","termid":"PBO:0053268"}


id: PBO:0077929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 2","termid":"PBO:0077929"}


id: PBO:0049556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 18","termid":"PBO:0049556"}


id: GO:0061270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of intraglomerular glomerular mesangium cells in the mesonephros by cell division, resulting in the expansion of their population. Intraglomerular mesangial cells are specialized pericytes located among the glomerular capillaries within a renal corpuscle of a kidney. They are required for filtration, structural support and phagocytosis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular mesangial cell proliferation involved in mesonephros development","termid":"GO:0061269"},{"relation_name":"is_a","term_name":"intraglomerular mesangial cell proliferation","termid":"GO:0072123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric intraglomerular mesangial cell proliferation","termid":"GO:0061270"}


id: PBO:0070314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 3","termid":"PBO:0070314"}


id: GO:0017008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycobiliviolin to phycoerythrocyanin.","definition_xrefs":["RESID:AA0258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycobiliviolin linkage","termid":"GO:0017008"}


id: PBO:0064689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 25","termid":"PBO:0064689"}


id: PBO:0113392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant shows improved incorporation efficiency of noncanonical amino acids in place of amber stop codon","termid":"PBO:0113392"}


id: PBO:0078315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta constant","termid":"PBO:0078315"}


id: GO:2000892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cellobiose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide catabolic process","termid":"GO:0046352"},{"relation_name":"is_a","term_name":"cellobiose metabolic process","termid":"GO:2000891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellobiose catabolic process","synonyms":[{"name":"cellobiose catabolism","type":"exact"}],"termid":"GO:2000892"}


id: PBO:0030394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_multiseptate_vegetative_cell","termid":"PBO:0030394"}


id: PATO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological sex","termid":"PATO:0000047"}


id: GO:1902065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an L-glutamate stimulus.","definition_xrefs":["PMID:23574009","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-glutamate","termid":"GO:1902065"}


id: GO:2000234
data:
  {"annotated_genes":["SJAG_01764","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88068,92276],"is_not":false,"summary":null,"term":"GO:2000234"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of rRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of rRNA processing","termid":"GO:2000232"},{"relation_name":"positively_regulates","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01764":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of rRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of 35S primary transcript processing","type":"related"}],"termid":"GO:2000234","terms_by_termid":{"GO:2000234":null}}


id: GO:1900777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumiquinazoline A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline A catabolic process (obsolete GO:1900777)","synonyms":[{"name":"fumiquinazoline A breakdown","type":"exact"},{"name":"fumiquinazoline A catabolism","type":"exact"},{"name":"fumiquinazoline A degradation","type":"exact"}],"termid":"GO:1900777"}


id: GO:2001293
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving malonyl-CoA, the S-malonyl derivative of coenzyme A.","definition_xrefs":["PMID:11902724","PMID:15726818","PMID:18981598","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"malonyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"malonyl-CoA metabolism","type":"exact"}],"termid":"GO:2001293","terms_by_termid":{"GO:2001295":null}}


id: PBO:0084423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major isozyme of methylenetetrahydrofolate reductase; catalyzes the reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate in the methionine biosynthesis pathway","termid":"PBO:0084423"}


id: SO:0000914
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert made from genomic DNA.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"genomic_DNA","termid":"SO:0000991"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cloned_genomic_insert","synonyms":[{"name":"cloned genomic insert","type":"exact"}],"termid":"SO:0000914"}


id: PBO:0027332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_menadione","termid":"PBO:0027332"}


id: PBO:0049221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 4","termid":"PBO:0049221"}


id: GO:0097272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of an internal steady state of ammonium.","definition_xrefs":["GOC:yaf","PMID:12695560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"ammonium homeostasis","synonyms":[{"name":"ammonia homeostasis","type":"exact"}],"termid":"GO:0097272"}


id: PBO:0039076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 4","termid":"PBO:0039076"}


id: PBO:0057223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 379","termid":"PBO:0057223"}


id: PBO:0090318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase-like protein","termid":"PBO:0090318"}


id: GO:1990037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The center portion of a Lewy body. In Parkinson's disease, it contains a matted meshwork of filaments.","definition_xrefs":["NIF_Subcellular:sao6587439252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Lewy body core","termid":"GO:1990037"}


id: PBO:0044923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 11","termid":"PBO:0044923"}


id: GO:0006122
data:
  {"annotated_genes":["SJAG_01763","SJAG_00080","SJAG_MIT03","SJAG_00755","SJAG_02744","SJAG_02646","SJAG_01490","SJAG_07006","SJAG_03490","SJAG_00601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86006,100193,100605,104088,109558,111257,112278,113864,114335,115236],"is_not":false,"summary":null,"term":"GO:0006122"}]},"cv_name":"biological_process","definition":"The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic electron transport chain","termid":"GO:0019646"},{"relation_name":"part_of","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_01490":null,"SJAG_01763":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03490":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"mitochondrial electron transport, ubiquinol to cytochrome c","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"complex III (ubiquinone to cytochrome c)","type":"related"}],"termid":"GO:0006122","terms_by_termid":{"GO:0006122":null}}


id: PBO:0070862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14","termid":"PBO:0070862"}


id: GO:0043264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring outside the cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-membrane-bounded organelle","termid":"GO:0043228"},{"relation_name":"is_a","term_name":"extracellular organelle","termid":"GO:0043230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extracellular non-membrane-bounded organelle","synonyms":[{"name":"extracellular non-membrane-enclosed organelle","type":"exact"}],"termid":"GO:0043264"}


id: GO:1903307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["GOC:pad","GOC:TermGenie","PMID:12526776","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of exocytosis","termid":"GO:0045921"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"positively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of regulated secretory pathway","synonyms":[{"name":"activation of regulated secretory pathway","type":"narrow"},{"name":"up regulation of regulated secretory pathway","type":"exact"},{"name":"up-regulation of regulated secretory pathway","type":"exact"},{"name":"upregulation of regulated secretory pathway","type":"exact"}],"termid":"GO:1903307"}


id: PBO:0074347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6","termid":"PBO:0074347"}


id: PBO:0041853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 3","termid":"PBO:0041853"}


id: GO:0052637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:3-3-16:0-phosphatidylglycerol = 1-18:3-3-trans-16:1-phosphatidylglycerol + 2 H+. This reaction is the formation of a trans double bond between carbon 3 and carbon 4 (counting from the carboxyl end) of palmitic acid, which is specifically esterified to the sn-2 glyceryl carbon of phosphatidylglycerol.","definition_xrefs":["GOC:ai","PMID:19682287"],"gene_count":0,"genotype_count":0,"name":"obsolete delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity (obsolete GO:0052637)","termid":"GO:0052637"}


id: GO:0042603
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protective structure surrounding some fungi and bacteria, attached externally to the cell wall and composed primarily of polysaccharides. Capsules are highly organized structures that adhere strongly to cells and cannot be easily removed. Capsules play important roles in pathogenicity, preventing phagocytosis by other cells, adherence, and resistance to desiccation.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"capsule","secondary_identifiers":["GO:0042604","GO:0030113","Wikipedia:Capsule_(microbiology)"],"termid":"GO:0042603"}


id: PR:O13716
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- agn1 gene.","definition_xrefs":["UniProtKB:O13716","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan endo-1,3-alpha-glucosidase agn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.09","synonyms":[{"name":"Spom972h-agn1","type":"exact"},{"name":"endo-1,3-alpha-glucanase agn1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13716"}


id: GO:0071821
data:
  {"annotated_genes":["SJAG_02294","SJAG_02465","SJAG_00935"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96723,104277,113619],"is_not":false,"summary":null,"term":"GO:0071821"}]},"cv_name":"cellular_component","definition":"A protein complex contains the proteins FANCM and MHF, or their orthologs, plays an essential role in DNA remodeling, protects replication forks, and is conserved in eukaryotes.","definition_xrefs":["PMID:20347428","GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00935":null,"SJAG_02294":null,"SJAG_02465":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FANCM-MHF complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071821","terms_by_termid":{"GO:0071821":null}}


id: FYPO:0003161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"RNA absent from cell during vegetative growth","secondary_identifiers":["FYPO:0004509"],"synonyms":[{"name":"RNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mRNA absent from cell","type":"narrow"},{"name":"mRNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mRNA absent from cell during vegetative growth","type":"narrow"},{"name":"mRNA transcripts absent from cell","type":"narrow"},{"name":"messenger RNA absent from cell","type":"narrow"},{"name":"transcripts absent from cell during vegetative growth","type":"exact"},{"name":"undetectable RNA level during vegetative growth","type":"exact"},{"name":"undetectable mRNA level","type":"narrow"}],"termid":"FYPO:0003161"}


id: PBO:0068764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1","termid":"PBO:0068764"}


id: PBO:0039308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 3, alpha-ketoglutarate dependent dioxygenase","termid":"PBO:0039308"}


id: GO:0000908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + O2 + taurine = aminoacetaldehyde + CO2 + succinate + sulfite.","definition_xrefs":["RHEA:15909","EC:1.14.11.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"taurine dioxygenase activity","secondary_identifiers":["MetaCyc:RXN0-299","KEGG_REACTION:R05320"],"synonyms":[{"name":"2-aminoethanesulfonate dioxygenase activity","type":"related"},{"name":"alpha-ketoglutarate-dependent taurine dioxygenase activity","type":"related"},{"name":"taurine, 2-oxoglutarate:O2 oxidoreductase (sulfite-forming)","type":"related"}],"termid":"GO:0000908"}


id: PBO:0067809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 111","termid":"PBO:0067809"}


id: GO:0090036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"protein kinase C signaling","termid":"GO:0070528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of protein kinase C signaling","synonyms":[{"name":"regulation of protein kinase C signaling cascade","type":"related"},{"name":"regulation of protein kinase C signalling cascade","type":"related"}],"termid":"GO:0090036"}


id: PBO:0042583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich DPF motif domain containing 1","termid":"PBO:0042583"}


id: PBO:0027090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_cell_death_during_mitosis","termid":"PBO:0027090"}


id: GO:0018531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-6-hydroxynicotine + H2O + O2 = 6-hydroxypseudooxynicotine + H2O2.","definition_xrefs":["EC:1.5.3.5","RHEA:11880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(S)-6-hydroxynicotine oxidase activity","secondary_identifiers":["UM-BBD_reactionID:r0478","KEGG_REACTION:R03202","MetaCyc:S-6-HYDROXYNICOTINE-OXIDASE-RXN"],"synonyms":[{"name":"(S)-6-hydroxynicotine:oxygen oxidoreductase activity","type":"related"},{"name":"6-hydroxy-L-nicotine oxidase activity","type":"exact"},{"name":"6-hydroxy-L-nicotine:oxygen oxidoreductase activity","type":"related"},{"name":"L-6-hydroxynicotine oxidase activity","type":"exact"}],"termid":"GO:0018531"}


id: FYPO:0007597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which CLRC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:23613586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"abolished CLRC complex binding","synonyms":[{"name":"CLRC binding complex abolished","type":"exact"},{"name":"abolished CLRC ubiquitin ligase complex binding","type":"exact"}],"termid":"FYPO:0007597"}


id: PBO:0051761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 7","termid":"PBO:0051761"}


id: PBO:0087458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric guanine nucleotide exchange factor (GEF); subunit of the Mon1-Ccz1 GEF complex, which stimulates nucleotide exchange and activation of Ypt7p, a Rab family GTPase involved in membrane tethering and fusion events at the late endosome and vacuole; GEF activity is stimulated by membrane association and anionic phospholipids; involved in localizing Ypt7p to the vacuolar membrane; required for macroautophagy, the CVT pathway and mitophagy","termid":"PBO:0087458"}


id: FYPO:0000773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which pre-replicative complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"abnormal pre-replicative complex assembly","synonyms":[{"name":"abnormal pre-RC assembly","type":"exact"},{"name":"abnormal pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal pre-replicative complex assembly during vegetative growth","type":"exact"},{"name":"abnormal pre-replicative complex formation","type":"exact"}],"termid":"FYPO:0000773"}


id: PBO:0040483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 3 like","termid":"PBO:0040483"}


id: PBO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.12","termid":"PBO:0005061"}


id: GO:0042661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm cell fate specification.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell differentiation","termid":"GO:1905770"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"mesodermal cell fate specification","termid":"GO:0007501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"}


id: PBO:0036444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dom34-Hbs1 translation release factor complex subunit Hbs1 (predicted)","termid":"PBO:0036444"}


id: GO:0098523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuromuscular junction in which the target muscle cell is a myotube.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction","termid":"GO:0031594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuromuscular junction of myotube","termid":"GO:0098523"}


id: GO:0034928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxypyrene + O2 + 2 H+ + 2 e- = 1-hydroxypyrene-6,7-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxypyrene 6,7-monooxygenase activity (obsolete GO:0034928)","termid":"GO:0034928"}


id: GO:0021520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord motor neuron cell fate specification","termid":"GO:0021520"}


id: PBO:0089458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorelay sensor kinase Mak2","termid":"PBO:0089458"}


id: PBO:0031267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_autophagy","termid":"PBO:0031267"}


id: PBO:0051285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-32 (pseudogene)","termid":"PBO:0051285"}


id: GO:0018941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving organomercury compound, any organic compound containing a mercury atom.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercury metabolic process (obsolete GO:0018941)","secondary_identifiers":["UM-BBD_pathwayID:ogm"],"synonyms":[{"name":"organomercury metabolism","type":"exact"}],"termid":"GO:0018941"}


id: PR:Q9HDT8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP20C8.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDT8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0612 protein P20C8.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP20C8.01c","synonyms":[{"name":"Spom972h-SPCP20C8.01c","type":"exact"}],"termid":"PR:Q9HDT8"}


id: PBO:0053492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 470","termid":"PBO:0053492"}


id: PBO:0058999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated A","termid":"PBO:0058999"}


id: PBO:0090289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA binding protein, vigilin","termid":"PBO:0090289"}


id: PBO:0040787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed X-linked 4","termid":"PBO:0040787"}


id: PBO:0027942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II-regulated_genes_during_vegetative_growth","termid":"PBO:0027942"}


id: GO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron that is part of the brainstem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noradrenergic neuron fate commitment","termid":"GO:0003359"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation involved in brainstem development","termid":"GO:0003361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron fate commitment involved in brainstem development","termid":"GO:0003362"}


id: GO:0036198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate) without de novo synthesis.","definition_xrefs":["PMID:5387459","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dTMP biosynthetic process","termid":"GO:0006231"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide salvage","termid":"GO:0010139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dTMP salvage","synonyms":[{"name":"dTMP biosynthesis via salvage pathway","type":"related"},{"name":"deoxythymidine monophosphate biosynthesis via salvage pathway","type":"related"}],"termid":"GO:0036198"}


id: PBO:0056399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE3 antisense RNA 1","termid":"PBO:0056399"}


id: PBO:0069895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1186, pseudogene","termid":"PBO:0069895"}


id: GO:0075030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont germ tube hook structure formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"formation of appressorium germ tube hook structure","termid":"GO:0075029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of formation of symbiont germ tube hook structure for appressorium development","synonyms":[{"name":"modulation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"modulation of symbiont germ tube hook structure formation on or near host","type":"related"},{"name":"regulation of formation of symbiont germ tube hook structure on or near host","type":"exact"}],"termid":"GO:0075030"}


id: GO:1900073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuromuscular synaptic transmission.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"neuromuscular synaptic transmission","termid":"GO:0007274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of neuromuscular synaptic transmission","termid":"GO:1900073"}


id: PATO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male fertility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male fertile","termid":"PATO:0000891"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased male fertility","synonyms":[{"name":"low male fertility","type":"exact"}],"termid":"PATO:0001833"}


id: PBO:0005415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase Meu8 (predicted)","termid":"PBO:0005415"}


id: PBO:0051415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-5 (pseudogene)","termid":"PBO:0051415"}


id: PBO:0079884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B like 1","termid":"PBO:0079884"}


id: GO:0140969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the lungs with respect to the left and right halves of the organism.","definition_xrefs":["PMID:20007846","GOC:rl","PMID:19944405","GOC:BHFL","PMID:21131974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of lung left/right asymmetry","termid":"GO:0140969"}


id: PATO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color between white and black colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grey","synonyms":[{"name":"plumbeous","type":"related"}],"termid":"PATO:0000950"}


id: GO:0044600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + protein = diphosphate + guanylyl-protein; mediates the addition of an guanylyl (guanosine 5'-monophosphate; GMP group) to specific residues of target proteins.","definition_xrefs":["GOC:sp","PMID:20651120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"protein guanylyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9765952"],"termid":"GO:0044600"}


id: PBO:0060942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 2 like 3 pseudogene 2","termid":"PBO:0060942"}


id: GO:0043829
data:
  {"annotated_genes":["SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100066],"is_not":false,"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine-37 + H2O = inosine-37 + NH3, in a tRNA-Ala molecule.","definition_xrefs":["PMID:8915538","RHEA:50968","PMID:9707437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific adenosine deaminase activity","termid":"GO:0008251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"tRNA-specific adenosine-37 deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.4.34"],"synonyms":[{"name":"TAD1","type":"related"},{"name":"tRNA(Ala)-A37 deaminase activity","type":"exact"},{"name":"tRNA-specific adenosine deaminase 1","type":"exact"}],"termid":"GO:0043829","terms_by_termid":{"GO:0043829":null}}


id: PBO:0035875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035875"}


id: PBO:0002197
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.45","termid":"PBO:0002197"}


id: PBO:0079894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 3","termid":"PBO:0079894"}


id: GO:0050685
data:
  {"annotated_genes":["SJAG_01040","SJAG_02018","SJAG_01919","SJAG_02058","SJAG_00996"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[72883,107064,88182,74255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA processing.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"is_a","term_name":"positive regulation of mRNA metabolic process","termid":"GO:1903313"},{"relation_name":"positively_regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00996":null,"SJAG_01040":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"positive regulation of mRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of mRNA processing","type":"narrow"},{"name":"stimulation of mRNA processing","type":"narrow"},{"name":"up regulation of mRNA processing","type":"exact"},{"name":"up-regulation of mRNA processing","type":"exact"},{"name":"upregulation of mRNA processing","type":"exact"}],"termid":"GO:0050685","terms_by_termid":{"GO:0048026":null,"GO:1905746":null}}


id: PBO:0042171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 2","termid":"PBO:0042171"}


id: PBO:0081407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 254","termid":"PBO:0081407"}


id: PBO:0042496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 16","termid":"PBO:0042496"}


id: GO:0043695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a pheromone stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to pheromone","termid":"GO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of pheromone","termid":"GO:0043695"}


id: GO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of binding to an RNA polymerase III (RNAP III) transcription factor and recruiting it to the transcription machinery complex in order to modulate transcription by RNAP III.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase III transcription factor recruiting (obsolete GO:0001153)","synonyms":[{"name":"RNA polymerase III transcription factor recruiting transcription factor activity","type":"exact"}],"termid":"GO:0001153"}


id: GO:0034499
data:
  {"annotated_genes":["SJAG_00314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108607],"is_not":false,"summary":null,"term":"GO:0034499"}]},"cv_name":"biological_process","definition":"The directed movement of substances from late endosomes to the Golgi.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"late endosome to Golgi transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PVE to Golgi transport","type":"exact"},{"name":"prevacuolar endosome to Golgi transport","type":"exact"}],"termid":"GO:0034499","terms_by_termid":{"GO:0034499":null}}


id: PBO:0069122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 371, pseudogene","termid":"PBO:0069122"}


id: RO:0002256
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"t1 induced_by t2 if there is a process of developmental induction (GO:0031128) with t1 and t2 as interacting participants. t2 causes t1 to change its fate from a precursor anatomical structure type T to T', where T' develops_from T","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_induced_by","termid":"RO:0002256"}


id: PR:Q09877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sif3 gene.","definition_xrefs":["UniProtKB:Q09877","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sad1-interacting factor 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.15","synonyms":[{"name":"Spom972h-sif3","type":"exact"}],"termid":"PR:Q09877"}


id: PBO:0073468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sideroflexin 4","termid":"PBO:0073468"}


id: GO:0018596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dimethylsilanediol + O2 + 2 H+ + 2 e- = H2O + hydroxymethylmethylsilanediol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylsilanediol hydroxylase activity (obsolete GO:0018596)","synonyms":[{"name":"DMSD hydroxylase activity","type":"exact"}],"termid":"GO:0018596"}


id: GO:0008931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete murein DD-endopeptidase activity (obsolete GO:0008931)","synonyms":[{"name":"murein DD-endopeptidase activity","type":"exact"}],"termid":"GO:0008931"}


id: GO:0035908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventral aorta over time, from its initial formation to the mature structure. The ventral aorta is a blood vessel in a single-pass circulatory system that carries de-oxygenated blood from the heart to the gills. In a single-pass circulatory system blood passes once through the heart to supply the body once.","definition_xrefs":["GOC:bf","UBERON:0003085","Wikipedia:Aorta","ZFA:0000604","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral aorta development","termid":"GO:0035908"}


id: PBO:0002417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Has1 (predicted)","termid":"PBO:0002417"}


id: GO:0071491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red light","termid":"GO:0010114"},{"relation_name":"is_a","term_name":"cellular response to red or far red light","termid":"GO:0071489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to red light","synonyms":[{"name":"cellular response to red light stimulus","type":"exact"}],"termid":"GO:0071491"}


id: PBO:0073716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1 pseudogene 3","termid":"PBO:0073716"}


id: MOD:02001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a stearoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"stearoylated residue","termid":"MOD:02001"}


id: PBO:0049385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF3C6 pseudogene 1","termid":"PBO:0049385"}


id: PBO:0059695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 3","termid":"PBO:0059695"}


id: PBO:0071875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 13","termid":"PBO:0071875"}


id: GO:1901324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trichodermin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trichodermin","termid":"GO:1901324"}


id: _global:results_in_movement_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"Holds between p and c when p is locomotion process and the outcome of this process is the change of location of c","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_changes_to_anatomical_or_cellular_structure","termid":"_global:results_in_changes_to_anatomical_or_cellular_structure"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_movement_of","secondary_identifiers":["GOREL:0001001","RO:0002565"],"termid":"_global:results_in_movement_of"}


id: GO:0009107
data:
  {"annotated_genes":["SJAG_03198","SJAG_03553"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93234,108837],"is_not":false,"summary":null,"term":"GO:0009107"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"lipoate metabolic process","termid":"GO:0009106"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03198":null,"SJAG_03553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0006629"],"is_obsolete":false,"name":"lipoate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0009105"],"synonyms":[{"name":"lipoate anabolism","type":"exact"},{"name":"lipoate biosynthesis","type":"exact"},{"name":"lipoate formation","type":"exact"},{"name":"lipoate synthesis","type":"exact"},{"name":"lipoic acid anabolism","type":"exact"},{"name":"lipoic acid biosynthesis","type":"exact"},{"name":"lipoic acid biosynthetic process","type":"exact"},{"name":"lipoic acid formation","type":"exact"},{"name":"lipoic acid synthesis","type":"exact"}],"termid":"GO:0009107","terms_by_termid":{"GO:0009107":null}}


id: PBO:0048141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 5","termid":"PBO:0048141"}


id: PBO:0047490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase","termid":"PBO:0047490"}


id: PBO:0114528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific microprotein, GPI anchored","termid":"PBO:0114528"}


id: GO:1902611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a N-phenylthiourea stimulus.","definition_xrefs":["GO_REF:0000071","GOC:rjd","GOC:TermGenie","PMID:24006265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to N-phenylthiourea","termid":"GO:1902610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to N-phenylthiourea","termid":"GO:1902611"}


id: GO:1903597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gap junction assembly.","definition_xrefs":["GO_REF:0000058","GOC:rl","PMID:25017399","GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"is_a","term_name":"regulation of gap junction assembly","termid":"GO:1903596"},{"relation_name":"negatively_regulates","term_name":"gap junction assembly","termid":"GO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gap junction assembly","synonyms":[{"name":"down regulation of gap junction assembly","type":"exact"},{"name":"down-regulation of gap junction assembly","type":"exact"},{"name":"downregulation of gap junction assembly","type":"exact"},{"name":"inhibition of gap junction assembly","type":"narrow"}],"termid":"GO:1903597"}


id: PBO:0031553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_peptidase_activity","termid":"PBO:0031553"}


id: GO:0097496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A blood vessel lumenization process that occurs by blood vessel endothelial cells delaminating and aligning along the inner surface of an existing luminal space, extending the open ended lumen, and joining to other blood vessels to form a complete blood vessel.","definition_xrefs":["PMID:23698350","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel lumenization","termid":"GO:0072554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel lumen ensheathment","termid":"GO:0097496"}


id: GO:0000394
data:
  {"annotated_genes":["SJAG_00956","SJAG_04907","SJAG_00754","SJAG_03328","SJAG_03913","SJAG_01791","SJAG_01260"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91702,89500,86674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006388"},{"annotations":[96884,102041,113859,97422],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000379"}]},"cv_name":"biological_process","definition":"Splicing of RNA via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_00956":null,"SJAG_01260":null,"SJAG_01791":null,"SJAG_03328":null,"SJAG_03913":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA splicing, via endonucleolytic cleavage and ligation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA splicing","type":"broad"}],"termid":"GO:0000394","terms_by_termid":{"GO:0000379":null,"GO:0006388":null}}


id: SO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for pseudouridylation_guide_snoRNA. A snoRNA that specifies the site of pseudouridylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H_ACA_box_snoRNA_gene","termid":"SO:0002376"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylation_guide_snoRNA_gene","synonyms":[{"name":"pseudouridylation guide snoRNA gene","type":"exact"}],"termid":"SO:0002380"}


id: PBO:0091077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall and secondary septum 1,6 branched 1,3-beta-glucan synthase catalytic subunit Bgs4","termid":"PBO:0091077"}


id: MOD:00916
data:
  {"annotated_genes":["SJAG_02592","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115341,115342,115344,115733,115734,115343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-serine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-serine residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"synonyms":[{"name":"ModSer","type":"exact"}],"termid":"MOD:00916","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: PBO:0073326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 2 (gene/pseudogene)","termid":"PBO:0073326"}


id: GO:0052448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of ethylene in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of ethylene levels in symbiont (obsolete GO:0052448)","synonyms":[{"name":"modulation by organism of ethylene levels in symbiont","type":"exact"}],"termid":"GO:0052448"}


id: GO:0048206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport from the cis-Golgi to the rough ER.","definition_xrefs":["PMID:10219233","GOC:jid","GOC:mah","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","termid":"GO:0006890"},{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vesicle targeting, cis-Golgi to rough endoplasmic reticulum","synonyms":[{"name":"cis-Golgi to rough ER targeting","type":"exact"},{"name":"cis-Golgi to rough endoplasmic reticulum targeting","type":"exact"},{"name":"vesicle targeting, cis-Golgi to rough ER","type":"exact"}],"termid":"GO:0048206"}


id: PBO:0052376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 20A","termid":"PBO:0052376"}


id: PBO:0068895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 137, pseudogene","termid":"PBO:0068895"}


id: PBO:0029250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_filament_polymerization","termid":"PBO:0029250"}


id: PBO:0047652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 8","termid":"PBO:0047652"}


id: GO:1990909
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein protein complex containing membrane-localized Wnt receptors and cytosolic protein complexes, which is capable of transmitting the Wnt signal. Contains at least a Wnt protein, LRP5 or LRP6, a member of the Frizzled (Fz) family, Axin and and a Dishevelled (DVL) protein.","definition_xrefs":["GOC:bf","PMID:22899650","PMID:25336320","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Wnt signalosome","synonyms":[{"name":"LRP5/6 signalosome","type":"exact"},{"name":"LRP6 signalosome","type":"narrow"},{"name":"Wnt signalosome complex","type":"exact"},{"name":"Wnt-LRP5/6 signalosome","type":"exact"}],"termid":"GO:1990909"}


id: GO:0000440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3).","definition_xrefs":["PMID:22572993","GOC:krc","PMID:14500720","PMID:7813015","PMID:22308316","GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor TFIIH core complex","termid":"GO:0000439"},{"relation_name":"part_of","term_name":"nucleotide-excision repair factor 3 complex","termid":"GO:0000112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"core TFIIH complex portion of NEF3 complex","secondary_identifiers":["GO:0000442"],"synonyms":[{"name":"SSL2-core TFIIH complex portion of NEF3 complex","type":"exact"}],"termid":"GO:0000440"}


id: PBO:0078823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-6","termid":"PBO:0078823"}


id: GO:0008331
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95711],"is_not":false,"summary":null,"term":"GO:0008331"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a high voltage-gated channel. A high voltage-gated channel is a channel whose open state is dependent on high voltage across the membrane in which it is embedded.","definition_xrefs":["PMID:16382099","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"high voltage-gated calcium channel activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-type calcium channel","type":"related"},{"name":"N-type calcium channel","type":"related"},{"name":"P-type calcium channel","type":"related"},{"name":"Q-type calcium channel","type":"related"},{"name":"high voltage gated calcium channel activity","type":"exact"},{"name":"high voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:0008331","terms_by_termid":{"GO:0008331":null}}


id: PBO:0000529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-cysteine ligase Gcs1","termid":"PBO:0000529"}


id: GO:1903174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fatty alcohol.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:24036493","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"},{"relation_name":"is_a","term_name":"fatty alcohol metabolic process","termid":"GO:1903173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty alcohol catabolic process","synonyms":[{"name":"fatty alcohol breakdown","type":"exact"},{"name":"fatty alcohol catabolism","type":"exact"},{"name":"fatty alcohol degradation","type":"exact"}],"termid":"GO:1903174"}


id: GO:0007406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the proliferation of neuroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"is_a","term_name":"regulation of neuroblast proliferation","termid":"GO:1902692"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuroblast proliferation","synonyms":[{"name":"down regulation of neuroblast proliferation","type":"exact"},{"name":"down-regulation of neuroblast proliferation","type":"exact"},{"name":"downregulation of neuroblast proliferation","type":"exact"},{"name":"inhibition of neuroblast proliferation","type":"narrow"},{"name":"suppression of neuroblast proliferation","type":"exact"}],"termid":"GO:0007406"}


id: PBO:0091085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated NEDD8-dissociated protein Knd1","termid":"PBO:0091085"}


id: GO:0016780
data:
  {"annotated_genes":["SJAG_01233","SJAG_02523","SJAG_04317","SJAG_01955","SJAG_00999","SJAG_04165","SJAG_03180","SJAG_04972","SJAG_03506","SJAG_00924","SJAG_04319","SJAG_02488","SJAG_00168"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043337"},{"annotations":[89070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008808"},{"annotations":[109178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008444"},{"annotations":[88171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003881"},{"annotations":[110839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003882"},{"annotations":[84688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051267"},{"annotations":[89085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004142"},{"annotations":[89086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004307"},{"annotations":[86383,93385,93759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008897"},{"annotations":[108508,110947,103676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051377"},{"annotations":[99683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003975"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor).","definition_xrefs":["EC:2.7.8.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00924":null,"SJAG_00999":null,"SJAG_01233":null,"SJAG_01955":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_03180":null,"SJAG_03506":null,"SJAG_04165":null,"SJAG_04317":null,"SJAG_04319":null,"SJAG_04972":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"phosphotransferase activity, for other substituted phosphate groups","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162742","Reactome:R-HSA-163069"],"termid":"GO:0016780","terms_by_termid":{"GO:0003881":null,"GO:0003882":null,"GO:0003975":null,"GO:0004142":null,"GO:0004307":null,"GO:0008444":null,"GO:0008808":null,"GO:0008897":null,"GO:0043337":null,"GO:0051267":null,"GO:0051377":null}}


id: GO:1900507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of iron-sulfur-molybdenum cofactor assembly.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur-molybdenum cofactor assembly","termid":"GO:1900506"},{"relation_name":"is_a","term_name":"negative regulation of iron-sulfur cluster assembly","termid":"GO:1903330"},{"relation_name":"negatively_regulates","term_name":"iron-sulfur-molybdenum cofactor assembly","termid":"GO:0044593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of iron-sulfur-molybdenum cofactor assembly","synonyms":[{"name":"down regulation of FeMoco assembly","type":"exact"},{"name":"down regulation of FeMoco biosynthetic process","type":"exact"},{"name":"down regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"down regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"down regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"down regulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"},{"name":"down-regulation of FeMoco assembly","type":"exact"},{"name":"down-regulation of FeMoco biosynthetic process","type":"exact"},{"name":"down-regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"down-regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"down-regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"down-regulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"},{"name":"downregulation of FeMoco assembly","type":"exact"},{"name":"downregulation of FeMoco biosynthetic process","type":"exact"},{"name":"downregulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"downregulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"downregulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"downregulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"},{"name":"inhibition of FeMoco assembly","type":"exact"},{"name":"inhibition of FeMoco biosynthetic process","type":"exact"},{"name":"inhibition of iron molybdenum cofactor assembly","type":"exact"},{"name":"inhibition of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"inhibition of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"inhibition of iron-sulfur-molybdenum cofactor assembly","type":"narrow"},{"name":"negative regulation of FeMoco assembly","type":"exact"},{"name":"negative regulation of FeMoco biosynthetic process","type":"exact"},{"name":"negative regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"negative regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"negative regulation of iron molybdenum cofactor biosynthetic process","type":"exact"}],"termid":"GO:1900507"}


id: GO:0002857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated immune response to a tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated immunity","termid":"GO:0002717"},{"relation_name":"is_a","term_name":"positive regulation of immune response to tumor cell","termid":"GO:0002839"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002855"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated immune response to tumor cell","termid":"GO:0002423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated immune response to tumor cell","synonyms":[{"name":"activation of natural killer cell mediated immune response to tumor cell","type":"narrow"},{"name":"stimulation of natural killer cell mediated immune response to tumor cell","type":"narrow"},{"name":"up regulation of natural killer cell mediated immune response to tumor cell","type":"exact"},{"name":"up-regulation of natural killer cell mediated immune response to tumor cell","type":"exact"},{"name":"upregulation of natural killer cell mediated immune response to tumor cell","type":"exact"}],"termid":"GO:0002857"}


id: PR:O74903
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC613.03 gene.","definition_xrefs":["UniProtKB:O74903","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized calcium-binding protein C613.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.03","synonyms":[{"name":"Spom972h-SPCC613.03","type":"exact"}],"termid":"PR:O74903"}


id: PBO:0031847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_Golgi_morphology","termid":"PBO:0031847"}


id: GO:0022612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a gland are generated and organized.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gland morphogenesis","termid":"GO:0022612"}


id: PBO:0067805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 107","termid":"PBO:0067805"}


id: GO:0034683
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphav subunit and one beta3 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"integrin alphav-beta3 complex","synonyms":[{"name":"ITGAV-ITGB3 complex","type":"narrow"},{"name":"alphav-beta3 integrin complex","type":"exact"}],"termid":"GO:0034683"}


id: PBO:0005331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Emp24 (predicted)","termid":"PBO:0005331"}


id: MOD:01387
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-methyl-L-threonine.","definition_xrefs":["PubMed:7328054","RESID:AA0464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated threonine","termid":"MOD:01803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"O-methyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-methoxybutanoic acid","type":"exact"},{"name":"MOD_RES O-methylthreonine","type":"exact"},{"name":"O-methyl threonine","type":"exact"},{"name":"O-methyl-L-threonine","type":"exact"},{"name":"OMeThr","type":"exact"},{"name":"threonine methyl ether","type":"exact"}],"termid":"MOD:01387"}


id: PBO:0058534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6079","termid":"PBO:0058534"}


id: PBO:0069188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 442, pseudogene","termid":"PBO:0069188"}


id: FYPO:0007655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at one or more specific sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:33511417","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased nucleosome occupancy","synonyms":[{"name":"increased nucleosome occupancy during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy during vegetative growth","type":"exact"}],"termid":"FYPO:0007655"}


id: PBO:0049516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AC histone family pseudogene 1","termid":"PBO:0049516"}


id: GO:0102694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + kinetin = H+ + 9-(alpha-D-glucosyl)kinetin + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kinetin UDP glycosyltransferase activity (obsolete GO:0102694)","termid":"GO:0102694"}


id: PBO:0050944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 16","termid":"PBO:0050944"}


id: PBO:0043444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 4","termid":"PBO:0043444"}


id: PBO:0087354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor and component of snRNP U5; factor involved in the positioning of the 3' splice site during the second catalytic step of splicing; interacts with Slu7p","termid":"PBO:0087354"}


id: PBO:0027358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actomyosin_contractile_ring_contraction","termid":"PBO:0027358"}


id: GO:0032926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of any activin receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activin receptor signaling pathway","termid":"GO:0032925"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"negatively_regulates","term_name":"activin receptor signaling pathway","termid":"GO:0032924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of activin receptor signaling pathway","synonyms":[{"name":"down regulation of activin receptor signaling pathway","type":"exact"},{"name":"down-regulation of activin receptor signaling pathway","type":"exact"},{"name":"downregulation of activin receptor signaling pathway","type":"exact"},{"name":"inhibition of activin receptor signaling pathway","type":"narrow"},{"name":"negative regulation of activin receptor signalling pathway","type":"exact"},{"name":"negative regulation of activin signaling pathway","type":"related"},{"name":"negative regulation of activin signalling pathway","type":"related"}],"termid":"GO:0032926"}


id: PBO:0027748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_translation_gene_mRNA_during_nitrogen_starvation","termid":"PBO:0027748"}


id: PBO:0080763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis pseudogene 2","termid":"PBO:0080763"}


id: GO:0071687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the horsetail nucleus where telomeres cluster under the SPB and that leads horsetail movement. The horsetail nucleus is the elongated nucleus which forms during the rapid oscillatory movement at meiotic prophase; characterized in Schizosaccharomyces pombe.","definition_xrefs":["GOC:mah","PMID:15030757","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete horsetail nucleus leading edge (obsolete GO:0071687)","termid":"GO:0071687"}


id: PBO:0028268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_multiseptate_tapered_cell","termid":"PBO:0028268"}


id: PBO:0060764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 8","termid":"PBO:0060764"}


id: PBO:0061756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"out at first homolog","termid":"PBO:0061756"}


id: GO:0007428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of primary branches in the open tracheal system. These form from small groups of cells that migrate out at specific positions, organizing into tubes as they migrate. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:29844090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in open tracheal system development","termid":"GO:0060446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary branching, open tracheal system","synonyms":[{"name":"primary tracheal branching","type":"exact"}],"termid":"GO:0007428"}


id: GO:2000687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of rubidium ion transmembrane transporter activity.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of rubidium ion transmembrane transporter activity (obsolete GO:2000687)","synonyms":[{"name":"negative regulation of Rb+ transmembrane transporter activity","type":"exact"},{"name":"negative regulation of rubidium cation transmembrane transporter activity","type":"exact"},{"name":"negative regulation of rubidium transmembrane transporter activity","type":"related"}],"termid":"GO:2000687"}


id: PBO:0034562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maintenance_of_protein_location_at_growing_cell_tip","termid":"PBO:0034562"}


id: PBO:0015244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase non-catalytic Sm-like domain subunit Naa38 (predicted)","termid":"PBO:0015244"}


id: PBO:0063681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 5","termid":"PBO:0063681"}


id: PBO:0108711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RasGEF Ste6","termid":"PBO:0108711"}


id: GO:0032867
data:
  {"annotated_genes":["SJAG_03958","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91809,97268],"is_not":false,"summary":null,"term":"GO:0032867"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabitol + NADP+ = L-arabinose + NADPH + H+.","definition_xrefs":["RHEA:25229","PMID:12724380","PMID:15184173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldose reductase (NADPH) activity","termid":"GO:0004032"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-arabinose reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01759","SABIO-RK:1858","MetaCyc:RXN-8772"],"synonyms":[{"name":"L-arabinose:NADP reductase activity","type":"exact"},{"name":"arabinose reductase activity","type":"broad"},{"name":"arabinose:NADP reductase activity","type":"broad"}],"termid":"GO:0032867","terms_by_termid":{"GO:0032867":null}}


id: PBO:0065659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type J","termid":"PBO:0065659"}


id: GO:0071678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a neuron in the olfactory bulb is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb axon guidance","synonyms":[{"name":"olfactory bulb axon pathfinding","type":"exact"}],"termid":"GO:0071678"}


id: GO:0031827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2B serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 2B serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 2B receptor binding","type":"exact"},{"name":"type 2B serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031827"}


id: PR:P78817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh5 gene.","definition_xrefs":["UniProtKB:P78817","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized alpha-1,2-galactosyltransferase C637.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.06","synonyms":[{"name":"Spom972h-gmh5","type":"exact"}],"termid":"PR:P78817"}


id: PBO:0109840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_allele_systematic_id","termid":"PBO:0109840"}


id: GO:0050649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + donor-H2 + O2 = 6-beta-hydroxytestosterone + H2O.","definition_xrefs":["GOC:ai","PMID:11726664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"testosterone 6-beta-hydroxylase activity","synonyms":[{"name":"testosterone 6b-hydroxylase activity","type":"exact"}],"termid":"GO:0050649"}


id: GO:0033481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galacturonate, the anion of galacturonic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonate metabolic process","termid":"GO:0019586"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"galacturonate biosynthetic process","synonyms":[{"name":"galacturonate synthesis","type":"exact"},{"name":"galacturonate anabolism","type":"exact"},{"name":"galacturonate biosynthesis","type":"exact"},{"name":"galacturonate formation","type":"exact"}],"termid":"GO:0033481"}


id: GO:1903214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting to mitochondrion.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting","termid":"GO:1903533"},{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to mitochondrion","termid":"GO:1903747"},{"relation_name":"regulates","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0006605"],"is_obsolete":false,"name":"regulation of protein targeting to mitochondrion","synonyms":[{"name":"regulation of mitochondrial protein import","type":"related"},{"name":"regulation of mitochondrial translocation","type":"related"},{"name":"regulation of protein import into mitochondrion","type":"exact"},{"name":"regulation of protein targeting to mitochondria","type":"exact"},{"name":"regulation of protein-mitochondrial targeting","type":"exact"}],"termid":"GO:1903214"}


id: PBO:0050166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 22","termid":"PBO:0050166"}


id: PBO:0069912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1204, pseudogene","termid":"PBO:0069912"}


id: FYPO:0000670
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115787,115788,115789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is abnormal. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GO:0051306","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"part_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0000337","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid separation","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal mitotic chromosome separation","type":"exact"},{"name":"abnormal sister chromatid separation during mitosis","type":"exact"},{"name":"abnormal sister chromatid separation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid separation during vegetative growth","type":"exact"},{"name":"aneuploidy","type":"related"},{"name":"mitotic chromosome missegregation","type":"related"}],"termid":"FYPO:0000670","terms_by_termid":{"FYPO:0000671":null}}


id: GO:1900566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of chanoclavine-I.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete chanoclavine-I biosynthetic process (obsolete GO:1900566)","synonyms":[{"name":"chanoclavine-I anabolism","type":"exact"},{"name":"chanoclavine-I biosynthesis","type":"exact"},{"name":"chanoclavine-I formation","type":"exact"},{"name":"chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900566"}


id: GO:0033943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in (1->3)-beta-D-galactopyranans.","definition_xrefs":["EC:3.2.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-galactosidase activity","termid":"GO:0004565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"galactan 1,3-beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.145-RXN"],"synonyms":[{"name":"galactan (1,3)-beta-D-galactosidase activity","type":"related"},{"name":"galactan (1->3)-beta-D-galactosidase activity","type":"related"}],"termid":"GO:0033943"}


id: PR:O14091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sut1 gene.","definition_xrefs":["UniProtKB:O14091","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general alpha-glucoside permease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.08","synonyms":[{"name":"Spom972h-sut1","type":"exact"}],"termid":"PR:O14091"}


id: GO:0003385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that mediates the transfer of information from one cell to another and contributes to the progression of an amphid sensory organ over time, from its formation to the mature state.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling involved in amphid sensory organ development (obsolete GO:0003385)","synonyms":[{"name":"cell-cell signalling involved in amphid sensory organ development","type":"exact"}],"termid":"GO:0003385"}


id: GO:0071195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv channel interacting protein KChIP4 associated with the channel via interaction with the Kv alpha subunit 4.2.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Kv4.2-KChIP4 channel complex","secondary_identifiers":["CORUM:3090"],"termid":"GO:0071195"}


id: PBO:0051581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor E","termid":"PBO:0051581"}


id: PBO:0090466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Ste11","termid":"PBO:0090466"}


id: PBO:0078027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 17","termid":"PBO:0078027"}


id: PBO:0004929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A binding protein (predicted)","termid":"PBO:0004929"}


id: GO:0039718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic viral factory that consists of a double-membrane bound vesicle. Has a diameter of 200-300nm and is derived from the endoplasmic reticulum or Golgi apparatus. Produced by Picornaviridae, Nidovirales, Arteriviridae and Coronaviridae.","definition_xrefs":["PMID:22440839","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory","synonyms":[{"name":"DMV viral factory","type":"exact"}],"termid":"GO:0039718"}


id: FYPO:0001830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on gluconate carbon source","synonyms":[{"name":"decreased growth on gluconate carbon source","type":"broad"},{"name":"decreased vegetative cell growth on gluconate carbon source","type":"exact"},{"name":"reduced cell growth on gluconate carbon source","type":"exact"},{"name":"slow cell growth on gluconate carbon source","type":"narrow"}],"termid":"FYPO:0001830"}


id: PBO:0038930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRL3 antisense RNA 1","termid":"PBO:0038930"}


id: PBO:0054063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1410","termid":"PBO:0054063"}


id: PBO:0026717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_ubiquitinated_protein_in_cell","termid":"PBO:0026717"}


id: FYPO:0007306
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H4K12 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H4K12 acetylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007306"}


id: PBO:0056455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARVEL domain containing 1","termid":"PBO:0056455"}


id: GO:0005607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta1 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-2 complex","synonyms":[{"name":"laminin-211 complex","type":"exact"}],"termid":"GO:0005607"}


id: GO:0052776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway resulting in the breakdown of diacetylchitobiose into simpler products, including glucosamine and glucosamine. The catabolism proceeds by the deacetylation of diacetylchitobiose, producing acetate and GlcN-GlcNAc; the latter is cleaved to produce glucosamine (GlcN) and N-acetylglucosamine (GlcNAc). The N-acetylglucosamine (GlcNAc) is then deacetylated to produce glucosamine (GlcN) and acetate.","definition_xrefs":["PMID:15136574","PMID:16232910","MetaCyc:PWY-6855","GOC:bf","PMID:16736587","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosamine metabolic process","termid":"GO:0006041"},{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"diacetylchitobiose catabolic process","termid":"GO:0052777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diacetylchitobiose catabolic process to glucosamine and acetate","termid":"GO:0052776"}


id: PR:000044705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/Me(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044705"}


id: GO:0042556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of the enzyme eukaryotic elongation factor-2 kinase.","definition_xrefs":["PMID:11904175","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"eukaryotic elongation factor-2 kinase regulator activity","synonyms":[{"name":"eEF-2 kinase regulator","type":"exact"}],"termid":"GO:0042556"}


id: GO:1900894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tridecane metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of tridecane metabolic process","termid":"GO:1900893"},{"relation_name":"negatively_regulates","term_name":"tridecane metabolic process","termid":"GO:1900631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tridecane metabolic process","synonyms":[{"name":"down regulation of tridecane metabolic process","type":"exact"},{"name":"down regulation of tridecane metabolism","type":"related"},{"name":"down-regulation of tridecane metabolic process","type":"exact"},{"name":"down-regulation of tridecane metabolism","type":"related"},{"name":"downregulation of tridecane metabolic process","type":"exact"},{"name":"downregulation of tridecane metabolism","type":"related"},{"name":"inhibition of tridecane metabolic process","type":"narrow"},{"name":"inhibition of tridecane metabolism","type":"narrow"},{"name":"negative regulation of tridecane metabolism","type":"related"}],"termid":"GO:1900894"}


id: GO:0052440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont ethylene-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway (obsolete GO:0052440)","synonyms":[{"name":"modulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052440"}


id: PBO:0030896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transport_phenotype_during_vegetative_growth","termid":"PBO:0030896"}


id: PR:O74749
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hse1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class E vacuolar protein-sorting machinery protein hse1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.08","synonyms":[{"name":"Spom972h-hse1","type":"exact"}],"termid":"PR:O74749"}


id: PBO:0059851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 4","termid":"PBO:0059851"}


id: GO:0032640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of tumor necrosis factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Tumor necrosis factor is an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis.","definition_xrefs":["PMID:10891884","GOC:mah","PMID:15560120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tumor necrosis factor production","secondary_identifiers":["GO:1990774","GO:0042533"],"synonyms":[{"name":"TNF alpha biosynthesis","type":"narrow"},{"name":"TNF biosynthesis","type":"narrow"},{"name":"TNF biosynthetic process","type":"narrow"},{"name":"TNF production","type":"exact"},{"name":"TNF-alpha biosynthesis","type":"narrow"},{"name":"TNF-alpha biosynthetic process","type":"narrow"},{"name":"TNF-alpha production","type":"related"},{"name":"Tnfa production","type":"related"},{"name":"cachectin production","type":"exact"},{"name":"tumor necrosis factor anabolism","type":"narrow"},{"name":"tumor necrosis factor biosynthesis","type":"narrow"},{"name":"tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"tumor necrosis factor formation","type":"narrow"},{"name":"tumor necrosis factor secretion","type":"narrow"},{"name":"tumor necrosis factor synthesis","type":"narrow"},{"name":"tumor necrosis factor-alpha production","type":"related"}],"termid":"GO:0032640"}


id: PBO:0027991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0027991"}


id: GO:0160013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2-hydroxyisobutanoyl)-L-lysyl-[protein] + NAD+ = 2''-O-(2-hydroxyisobutanoyl)-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["PMID:31328167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"NAD-dependent protein de-2-hydroxyisobutyrylase activity","secondary_identifiers":["RHEA:24364"],"termid":"GO:0160013"}


id: PBO:0076234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 2","termid":"PBO:0076234"}


id: FYPO:0001798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"},{"relation_name":"is_a","term_name":"decreased gene expression","termid":"FYPO:0006549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased translation","synonyms":[{"name":"decreased protein biosynthesis","type":"exact"},{"name":"decreased protein synthesis","type":"exact"},{"name":"decreased rate of protein synthesis","type":"narrow"},{"name":"decreased translation during mitotic cell cycle","type":"related"},{"name":"decreased translation during vegetative growth","type":"exact"},{"name":"reduced translation","type":"exact"}],"termid":"FYPO:0001798"}


id: PBO:0076562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3C","termid":"PBO:0076562"}


id: PBO:0080010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 pseudogene Y-linked","termid":"PBO:0080010"}


id: MOD:01338
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-ethyl-L-lysine.","definition_xrefs":["Unimod:280#K","PubMed:9629898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"ethylated residue","termid":"MOD:01339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-ethyl-L-lysine","synonyms":[{"name":"Ethyl","type":"related"},{"name":"Ethylation","type":"related"}],"termid":"MOD:01338"}


id: PBO:0091784
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/KM 4.3x10^7 M-1 min-1","termid":"PBO:0091784"}


id: GO:2000030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to red or far red light.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to red or far red light","termid":"GO:0009639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to red or far red light","termid":"GO:2000030"}


id: PBO:0051861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 2","termid":"PBO:0051861"}


id: PBO:0046458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor receptor pathway substrate 15 like 1","termid":"PBO:0046458"}


id: GO:0075066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont, or the progression of the symbiont from an initial condition to a later condition, occurring in its host's organelle. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host organelle (obsolete GO:0075066)","synonyms":[{"name":"growth or development of symbiont in host organelle","type":"exact"}],"termid":"GO:0075066"}


id: PBO:0109018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD13C divergent transcript","termid":"PBO:0109018"}


id: FYPO:0005758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication from late-firing origins is abnormal.","definition_xrefs":["PMID:22987637","GO:0101017","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation from late origin","synonyms":[{"name":"abnormal regulation of DNA replication initiation from late origin during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of late origin firing timing","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation at late origin","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late origin during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late replication origin","type":"exact"}],"termid":"FYPO:0005758"}


id: PBO:0075104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 153","termid":"PBO:0075104"}


id: GO:0018164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-threonine residue by the formation of O-(phospho-5'-DNA)-L-threonine.","definition_xrefs":["RESID:AA0255"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via peptidyl-threonine (obsolete GO:0018164)","synonyms":[{"name":"DNA-protein covalent cross-linking via peptidyl-threonine","type":"exact"}],"termid":"GO:0018164"}


id: PBO:0046935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member A","termid":"PBO:0046935"}


id: GO:0021812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The changes in adhesion between neuronal cells and glial cells as a component of the process of cerebral cortex glial-mediated radial cell migration.","definition_xrefs":["GOC:dph","GOC:dgh","PMID:12626695","GOC:jid","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"neuronal-glial interaction involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"neuronal-glial interaction involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021812"}


id: PBO:0079390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 3 class III pseudogene 2","termid":"PBO:0079390"}


id: PBO:0051733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 4 pseudogene 2","termid":"PBO:0051733"}


id: PATO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular placement quality inhering in a bearer by virtue of the bearer being changed in position in relation to another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced to","synonyms":[{"name":"mislocalised to","type":"related"}],"termid":"PATO:0002168"}


id: FYPO:0000869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation occurs to a greater extent than normal. All histone methylation may be affected, or methylation of specific sites on specific histones may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased histone methylation during vegetative growth","synonyms":[{"name":"increased histone methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000869"}


id: PBO:0041184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 8","termid":"PBO:0041184"}


id: PBO:0068398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF216 intronic transcript 1","termid":"PBO:0068398"}


id: PBO:0062963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 6","termid":"PBO:0062963"}


id: PBO:0069132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 382, pseudogene","termid":"PBO:0069132"}


id: GO:0141122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the breakage of a nitrogen-oxygen bond by means other than hydrolysis and oxidation.","definition_xrefs":["EC:4.8.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}


id: MOD:00605
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative, C-Terminal/Glutamate/Aspartate sulfonation","definition_xrefs":["Unimod:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:00605"}


id: FYPO:0002765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of tRNA (guanine(9)-N(1))-methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased tRNA methyltransferase activity","termid":"FYPO:0001772"},{"relation_name":"is_a","term_name":"abnormal tRNA (guanine(9)-N(1))-methyltransferase activity","termid":"FYPO:0002763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased tRNA (guanine(9)-N(1))-methyltransferase activity","synonyms":[{"name":"reduced tRNA (guanine(9)-N(1))-methyltransferase activity","type":"exact"}],"termid":"FYPO:0002765"}


id: FYPO:0000841
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115353],"is_not":false,"summary":null,"term":"FYPO:0000841"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium dodecyl sulfate (SDS). Cells stop growing (and may die) at a concentration of SDS that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":1,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to sodium dodecyl sulfate","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266"],"single_locus_genotype_uniquenames":["atf1delta"],"synonyms":[{"name":"hypersensitive to sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to SDS","type":"exact"},{"name":"sensitive to sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to sodium dodecyl sulphate","type":"exact"}],"termid":"FYPO:0000841","terms_by_termid":{"FYPO:0000841":null,"FYPO_EXT:0000001":null}}


id: FYPO:0005474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate dehydrogenase activity using NAPD+ as a cofactor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal glutamate dehydrogenase (NADP+) activity","synonyms":[{"name":"normal NAD(P)H-dependent glutamate dehydrogenase activity","type":"exact"},{"name":"normal NADP-GDH activity","type":"exact"}],"termid":"FYPO:0005474"}


id: GO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein-tyrosine kinase receptor Neu/ErbB-2/HER2.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"ErbB-2 class receptor binding","synonyms":[{"name":"ErbB-2 class receptor ligand","type":"narrow"},{"name":"HER2 receptor binding","type":"exact"},{"name":"HER2 receptor ligand","type":"narrow"},{"name":"Neu receptor binding","type":"exact"},{"name":"Neu receptor ligand","type":"narrow"}],"termid":"GO:0005176"}


id: PBO:0087229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Securin; inhibits anaphase by binding separin Esp1p; blocks cyclin destruction and mitotic exit, essential for meiotic progression and mitotic cell cycle arrest; localization is cell-cycle dependent and regulated by Cdc28p phosphorylation","termid":"PBO:0087229"}


id: GO:0010891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of sequestering of triglyceride. Triglyceride sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid storage","termid":"GO:0010888"},{"relation_name":"is_a","term_name":"regulation of sequestering of triglyceride","termid":"GO:0010889"},{"relation_name":"negatively_regulates","term_name":"sequestering of triglyceride","termid":"GO:0030730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sequestering of triglyceride","synonyms":[{"name":"negative regulation of sequestering of triacylglycerol","type":"exact"},{"name":"negative regulation of triglyceride sequestration","type":"exact"}],"termid":"GO:0010891"}


id: PBO:0078326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta variable 1","termid":"PBO:0078326"}


id: GO:0070606
data:
  {"annotated_genes":["SJAG_00424","SJAG_04666","SJAG_00610","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88449,85471,90981,98951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-glucan biosynthetic process","termid":"GO:0032949"},{"relation_name":"is_a","term_name":"regulation of (1->3)-alpha-glucan metabolic process","termid":"GO:0070605"},{"relation_name":"regulates","term_name":"(1->3)-alpha-glucan biosynthetic process","termid":"GO:0070596"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of (1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of 1,3-alpha-glucan anabolism","type":"exact"},{"name":"regulation of 1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"regulation of 1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"regulation of 1,3-alpha-glucan formation","type":"exact"},{"name":"regulation of 1,3-alpha-glucan synthesis","type":"exact"},{"name":"regulation of alpha-1,3 glucan anabolism","type":"exact"},{"name":"regulation of alpha-1,3 glucan biosynthesis","type":"exact"},{"name":"regulation of alpha-1,3 glucan biosynthetic process","type":"exact"},{"name":"regulation of alpha-1,3 glucan formation","type":"exact"},{"name":"regulation of alpha-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0070606","terms_by_termid":{"GO:0070610":null}}


id: PBO:0080719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WSC domain containing 1","termid":"PBO:0080719"}


id: PBO:0049686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine ammonia-lyase","termid":"PBO:0049686"}


id: GO:1905641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetaldehyde stimulus.","definition_xrefs":["GOC:TermGenie","PMID:27687866","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"response to acetaldehyde","termid":"GO:1905640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acetaldehyde","termid":"GO:1905641"}


id: GO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by norepinephrine","termid":"GO:0003061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by circulating norepinephrine","synonyms":[{"name":"increased force of heart contraction by circulating noradrenaline","type":"related"},{"name":"increased force of heart contraction by circulating norepinephrine","type":"exact"}],"termid":"GO:0003109"}


id: FYPO:0006534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell periphery does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to cell periphery during nitrogen starvation","synonyms":[{"name":"abolished protein localisation to cell periphery during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to cell periphery during nitrogen depletion","type":"exact"},{"name":"abolished protein localization to cell periphery during nitrogen deprivation","type":"exact"},{"name":"protein absent from cell periphery during nitrogen starvation","type":"related"},{"name":"protein localization to cell periphery abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006534"}


id: GO:0034822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: citronellal + NAD+ + OH- = citronellate + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete citronellal dehydrogenase activity (obsolete GO:0034822)","termid":"GO:0034822"}


id: PBO:0039268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDOA pseudogene 1","termid":"PBO:0039268"}


id: PBO:0002917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein Gas5, 1,3-beta-glucanosyltransferase (predicted)","termid":"PBO:0002917"}


id: FYPO:0001401
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[115619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003946"}],"single_locus_phenotype":[{"annotations":[115642,115641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115612,115613,115620,115624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143","SJAG_03596"],"name":"abnormal protein localization to cell division site","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to cell division site","type":"exact"},{"name":"abnormal protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0001401","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0003946":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: GO:0034098
data:
  {"annotated_genes":["SJAG_04384","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85291,100085],"is_not":false,"summary":null,"term":"GO:0034098"}]},"cv_name":"cellular_component","definition":"A multiprotein ATPase complex required for the efficient dislocation of ER-lumenal degradation substrates, and their subsequent proteolysis by the proteasome. In budding yeast, this complex includes Cdc48p, Npl4p and Ufd1p proteins. In mammals, this complex includes a hexamer of VCP/p97 (a cytosolic ATPase) and trimers of each of its cofactors UFD1L and NPL4 (NPLOC4) (e.g. a 6:3:3 stoichiometry).","definition_xrefs":["PMID:11813000","PMID:16179952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_04384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005783","GO:0005575","GO:0005789"],"is_obsolete":false,"name":"VCP-NPL4-UFD1 AAA ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cdc48p-Npl4p-Ufd1p AAA ATPase complex","type":"narrow"},{"name":"p97-Ufd1-Npl4 complex","type":"exact"}],"termid":"GO:0034098","terms_by_termid":{"GO:0034098":null}}


id: PBO:0068438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 8, pseudogene","termid":"PBO:0068438"}


id: PBO:0074514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A6","termid":"PBO:0074514"}


id: GO:0009908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the flower over time, from its formation to the mature structure. The flower is the reproductive structure in a plant, and its development begins with the transition of the vegetative or inflorescence meristem into a floral meristem.","definition_xrefs":["ISBN:0879015322","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive shoot system development","termid":"GO:0090567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower development","secondary_identifiers":["GO:0048409"],"termid":"GO:0009908"}


id: PBO:0003459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs85 (predicted)","termid":"PBO:0003459"}


id: PBO:0088925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2O2 scavenger glutathione peroxidase Gpx1","termid":"PBO:0088925"}


id: GO:0003033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about a lack of oxygen are received and are converted to a molecular signal by chemoreceptors in the aortic bodies.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signaling","termid":"GO:0003028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003033"}


id: PBO:0039724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3F","termid":"PBO:0039724"}


id: PBO:0000949
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.5.1.1","termid":"PBO:0000949"}


id: PBO:0055987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRTM4 antisense RNA 1","termid":"PBO:0055987"}


id: GO:0046554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + NADP+ = oxaloacetate + NADPH + H+.","definition_xrefs":["RHEA:10824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-malate dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.82","KEGG_REACTION:R00343","MetaCyc:MALATE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"(S)-malate:NADP+ oxidoreductase activity","type":"related"},{"name":"NADP malate dehydrogenase activity","type":"related"},{"name":"NADP-linked malate dehydrogenase activity","type":"related"},{"name":"NADP-malate dehydrogenase activity","type":"related"},{"name":"malate NADP dehydrogenase activity","type":"related"},{"name":"malic dehydrogenase (nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0046554"}


id: PR:P87227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A centromere protein I that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00370","PANTHER:PTHR15408:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein mis6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.20c","secondary_identifiers":["UniProtKB:P87227"],"synonyms":[{"name":"Spom972h-CENPI","type":"exact"},{"name":"sim4 complex subunit mis6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87227"}


id: GO:0033869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside bisphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleoside bisphosphate catabolic process","synonyms":[{"name":"nucleoside bisphosphate breakdown","type":"exact"},{"name":"nucleoside bisphosphate catabolism","type":"exact"},{"name":"nucleoside bisphosphate degradation","type":"exact"}],"termid":"GO:0033869"}


id: GO:0047899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + NADP+ = CO2 + NADPH.","definition_xrefs":["EC:1.17.1.10","RHEA:12000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"formate dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R00134","MetaCyc:FORMATE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"NADP-dependent formate dehydrogenase activity","type":"related"},{"name":"formate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047899"}


id: PBO:0040564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 4","termid":"PBO:0040564"}


id: MOD:01607
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl allysine.","definition_xrefs":["PubMed:19620981","RESID:AA0504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl allysine","synonyms":[{"name":"(2S)-2-([(4S)-4-amino-4-carboxybutanoyl]amino)-6-oxohexanoic acid","type":"exact"},{"name":"2-(5-glutamyl)amino-6-oxohexanoic acid","type":"exact"},{"name":"5-glutamyl allysine","type":"exact"},{"name":"N2-(gamma-glutamyl)allysine","type":"exact"},{"name":"N2-(isoglutamyl)allysine","type":"exact"},{"name":"alpha-(gamma-glutamyl)allysine","type":"exact"}],"termid":"MOD:01607"}


id: PBO:0004552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-ACP dehydratase Htd2 (predicted)","termid":"PBO:0004552"}


id: GO:0140641
data:
  {"annotated_genes":["SJAG_01613","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95309,97522],"is_not":false,"summary":null,"term":"GO:0140641"}]},"cv_name":"biological_process","definition":"The spindle organization process in which the spindle is maintained at a constant length during mitotic metaphase.","definition_xrefs":["PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle assembly","termid":"GO:0090307"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0008150","GO:0007049","GO:0000226","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"mitotic spindle formation (spindle phase two)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"metaphase spindle stability","type":"exact"},{"name":"metaphase spindle stabilization","type":"exact"}],"termid":"GO:0140641","terms_by_termid":{"GO:0140641":null}}


id: MOD:00351
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-glycyl-1-(phosphatidyl)ethanolamine.","definition_xrefs":["PubMed:11100732","RESID:AA0346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycyl-1-(phosphatidyl)ethanolamine","synonyms":[{"name":"(R)-1-hexadecanoyloxy-2-((Z)-9-octadecenoyloxy)-3-[2-(aminoacetylamino)ethyloxyphospho]propane","type":"exact"},{"name":"LIPID Phosphatidylethanolamine amidated glycine","type":"exact"},{"name":"N-glycyl-1-(phosphatidyl)ethanolamine","type":"exact"},{"name":"N-glycyl-1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine","type":"exact"}],"termid":"MOD:00351"}


id: PBO:0057669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1260b","termid":"PBO:0057669"}


id: FYPO:0005486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased iron-sulfur cluster binding","synonyms":[{"name":"increased iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0005486"}


id: PBO:0047395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO34 antisense RNA 1","termid":"PBO:0047395"}


id: GO:0071017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the displacement of the U11 and U4atac snRNPs from the precatalytic spliceosome; the U12, U5 and U6atac snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U12, and U5 and U6atac snRNPs.","definition_xrefs":["ISBN:0879697393","PMID:16201866","ISBN:0879695897","GOC:krc","GOC:mah","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U12-type spliceosomal complex","termid":"GO:0005689"},{"relation_name":"is_a","term_name":"catalytic step 1 spliceosome","termid":"GO:0071012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U12-type catalytic step 1 spliceosome","synonyms":[{"name":"AT-AC catalytic step 1 spliceosome","type":"narrow"},{"name":"U12-type activated spliceosome","type":"exact"},{"name":"mammalian U12-type spliceosomal complex B*","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex B2","type":"narrow"},{"name":"minor catalytic step 1 spliceosome","type":"exact"},{"name":"yeast U12-type spliceosomal complex A1","type":"narrow"}],"termid":"GO:0071017"}


id: PBO:0087843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonyl-tRNA synthetase; essential cytoplasmic protein; human homolog TARS can complement yeast null mutant","termid":"PBO:0087843"}


id: PBO:0087755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex; involved in the formation of Q-tRNAQ; transposon insertion mutant is salt sensitive and null mutant has growth defects; non-tagged protein is detected in purified mitochondria","termid":"PBO:0087755"}


id: GO:0009435
data:
  {"annotated_genes":["SJAG_02618","SJAG_02889","SJAG_01359","SJAG_00957","SJAG_04693","SJAG_03298","SJAG_01500"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96146,113475],"is_not":false,"summary":null,"term":"GO:0009435"},{"annotations":[86681,95422,109246,87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[85052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["ISBN:0618254153","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"},{"relation_name":"is_a","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"NAD biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006736"],"synonyms":[{"name":"NAD (oxidized) biosynthesis","type":"exact"},{"name":"NAD (oxidized) biosynthetic process","type":"exact"},{"name":"NAD (reduced) biosynthesis","type":"exact"},{"name":"NAD (reduced) biosynthetic process","type":"exact"},{"name":"NAD anabolism","type":"exact"},{"name":"NAD biosynthesis","type":"exact"},{"name":"NAD formation","type":"exact"},{"name":"NAD synthesis","type":"exact"},{"name":"NADH biosynthesis","type":"exact"},{"name":"NADH biosynthetic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"oxidized NAD biosynthesis","type":"exact"},{"name":"oxidized NAD biosynthetic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"reduced NAD biosynthesis","type":"exact"},{"name":"reduced NAD biosynthetic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthetic process","type":"exact"}],"termid":"GO:0009435","terms_by_termid":{"GO:0009435":null,"GO:0034355":null,"GO:0034356":null}}


id: PBO:0051287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-35 (pseudogene)","termid":"PBO:0051287"}


id: PATO:0015003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A decrease in the ability of a process to produce its output.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"process efficacy","termid":"PATO:0015002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased efficacy","termid":"PATO:0015003"}


id: PBO:0048050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formiminotransferase cyclodeaminase N-terminal like","termid":"PBO:0048050"}


id: SO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exon that is bounded by 5' and 3' splice sites.","definition_xrefs":["PMID:10373547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interior_exon","synonyms":[{"name":"interior exon","type":"exact"}],"termid":"SO:0000201"}


id: GO:0018298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or noncovalent attachment of a chromophore to a protein.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage (obsolete GO:0018298)","termid":"GO:0018298"}


id: FYECO:0000078
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115339,115351],"is_not":false,"summary":null,"term":"FYECO:0000078"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which hydrogen peroxide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"+ H2O2","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["atf1delta","sty1delta"],"synonyms":[{"name":"hydrogen peroxide added","type":"exact"}],"termid":"FYECO:0000078","terms_by_termid":{"FYECO:0000078":null,"FYPO_EXT:0000001":null}}


id: PBO:0047333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBLIM1 pseudogene 2","termid":"PBO:0047333"}


id: PBO:0082230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha catalytic subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082230"}


id: PBO:0027618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body","termid":"PBO:0027618"}


id: GO:0002647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of central tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of central tolerance induction","termid":"GO:0002646"},{"relation_name":"negatively_regulates","term_name":"central tolerance induction","termid":"GO:0002508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of central tolerance induction","synonyms":[{"name":"down regulation of central tolerance induction","type":"exact"},{"name":"down-regulation of central tolerance induction","type":"exact"},{"name":"downregulation of central tolerance induction","type":"exact"},{"name":"inhibition of central tolerance induction","type":"narrow"}],"termid":"GO:0002647"}


id: PBO:0061683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 133","termid":"PBO:0061683"}


id: GO:0098921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by an endocannabinoid ligand.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling by lipid","termid":"GO:0098920"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by endocannabinoid","termid":"GO:0099542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by endocannabinoid","termid":"GO:0098921"}


id: PBO:0050032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR alpha","termid":"PBO:0050032"}


id: PBO:0051266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IgA inducing protein","termid":"PBO:0051266"}


id: PBO:0113302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in C/D snoRNP assembly; critical for formation of small nucleolar ribonucleoprotein complexes that are required for rRNA processing and 2'-O-methylation; regulates abundance of Rsa1p; required for growth at high temperature; mutations in human homolog ZNHIT3 cause PEHO syndrome, a ribosomopathy characterized by extreme cerebellar atrophy","termid":"PBO:0113302"}


id: GO:0061400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to a calcium ion stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to calcium ion (obsolete GO:0061400)","termid":"GO:0061400"}


id: PBO:0059470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"musashi RNA binding protein 2","termid":"PBO:0059470"}


id: PBO:0027021
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutathione_import_into_vacuole","termid":"PBO:0027021"}


id: GO:0072386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an organelle towards the plus end of a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"plus-end-directed organelle transport along microtubule","synonyms":[{"name":"microtubule plus-end-directed organelle distribution","type":"narrow"},{"name":"microtubule plus-end-directed organelle localization","type":"exact"}],"termid":"GO:0072386"}


id: GO:0052450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of induced systemic resistance in the symbiont organism; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of induced systemic resistance in symbiont (obsolete GO:0052450)","synonyms":[{"name":"modulation by organism of induced systemic resistance in symbiont","type":"exact"}],"termid":"GO:0052450"}


id: PR:O94361
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 1-acyl-sn-glycerol-3-phosphate acyltransferase delta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized acyltransferase C428.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.14","secondary_identifiers":["UniProtKB:O94361"],"synonyms":[{"name":"Spom972h-AGPAT4","type":"exact"}],"termid":"PR:O94361"}


id: PBO:0076289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsin II","termid":"PBO:0076289"}


id: GO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex having creatine kinase activity.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"creatine kinase complex","termid":"GO:0002185"}


id: PBO:0088444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe Sro1 ortholog, syntenic position, intrinsically disordered region","termid":"PBO:0088444"}


id: GO:0060381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of single-stranded telomeric DNA binding.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of single-stranded telomeric DNA binding","termid":"GO:0060380"},{"relation_name":"is_a","term_name":"positive regulation of telomeric DNA binding","termid":"GO:1904744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single-stranded telomeric DNA binding","synonyms":[{"name":"positive regulation of telomeric ssDNA binding","type":"exact"}],"termid":"GO:0060381"}


id: PBO:0064334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 4","termid":"PBO:0064334"}


id: PBO:0031276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_G0_to_G1_transition","termid":"PBO:0031276"}


id: PBO:0031775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G1_to_G0_transition","termid":"PBO:0031775"}


id: GO:0009662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an etioplast. An etioplast is a plastid arrested in the development of chloroplasts from proplastids due to absence of light or low light conditions.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"etioplast organization","synonyms":[{"name":"etioplast organisation","type":"exact"},{"name":"etioplast organization and biogenesis","type":"related"}],"termid":"GO:0009662"}


id: GO:0018634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-pinene + NADH + H+ + O2 = NAD+ + H2O + alpha-pinene oxide.","definition_xrefs":["RHEA:32891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alpha-pinene monooxygenase (NADH) activity","secondary_identifiers":["EC:1.14.13.155","UM-BBD_reactionID:r0742"],"synonyms":[{"name":"alpha-pinene monooxygenase [NADH] activity","type":"exact"}],"termid":"GO:0018634"}


id: GO:0039635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of peptidoglycan biosynthesis in the host organism. Peptidoglycans are any of a class of glycoconjugates found in bacterial cell walls.","definition_xrefs":["GOC:bm","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"suppression by virus of host cell wall biogenesis","termid":"GO:0039636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host peptidoglycan biosynthetic process","synonyms":[{"name":"viral inhibition of host peptidoglycan biosynthesis","type":"related"}],"termid":"GO:0039635"}


id: PBO:0030012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_salt_stress","termid":"PBO:0030012"}


id: PBO:0031863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_G1/S_transition_delay","termid":"PBO:0031863"}


id: PBO:0004283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor (predicted)","termid":"PBO:0004283"}


id: PBO:0062867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTUD4 pseudogene 1","termid":"PBO:0062867"}


id: CHEBI:28300
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An alpha-amino acid that consists of butyric acid bearing an amino substituent at position 2 and a carbamoyl substituent at position 4.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine","termid":"CHEBI:28300"}


id: GO:0031109
data:
  {"annotated_genes":["SJAG_01224","SJAG_02761","SJAG_02045","SJAG_03540","SJAG_02336","SJAG_02886","SJAG_02624","SJAG_04841","SJAG_01297","SJAG_00723","SJAG_00856","SJAG_01756","SJAG_01215","SJAG_02737","SJAG_07018","SJAG_02609","SJAG_03835","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[113117],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[114321,100009,104385,85653,94697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[106720,105743,104981],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[102560,97070,113365,113122,96165,96464],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[114837,97071],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[114322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[104394,100017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[97936],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031117"},{"annotations":[87412],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031110"}]},"cv_name":"biological_process","definition":"Assembly or disassembly of microtubules by the addition or removal of tubulin heterodimers from a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00723":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01756":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04312":null,"SJAG_04841":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"microtubule polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule dynamics","type":"exact"}],"termid":"GO:0031109","terms_by_termid":{"GO:0007019":null,"GO:0007020":null,"GO:0030954":null,"GO:0031110":null,"GO:0031117":null,"GO:0046785":null,"GO:0051415":null,"GO:0051417":null,"GO:0060172":null,"GO:0070462":null}}


id: GO:0033074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of the monoterpenoid pinene; alpha-pinene is (1S,5S)-2,6,6-trimethylbicyclo[3.1.1]hept-2-ene, and beta-pinene is (1S,5S)-6,6-dimethyl-2-methylenebicyclo[3.1.1]heptane.","definition_xrefs":["PMID:11452597","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinene metabolic process","termid":"GO:0033073"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pinene catabolic process","synonyms":[{"name":"pinene breakdown","type":"exact"},{"name":"pinene catabolism","type":"exact"},{"name":"pinene degradation","type":"exact"}],"termid":"GO:0033074"}


id: PBO:0072328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 14","termid":"PBO:0072328"}


id: GO:0072423
data:
  {"annotated_genes":["SJAG_04332","SJAG_03048","SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[90588,98490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage checkpoint effector process","type":"exact"},{"name":"response to signal involved in DNA damage checkpoint","type":"exact"}],"termid":"GO:0072423","terms_by_termid":{"GO:0072429":null,"GO:0072435":null}}


id: PBO:0077339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 78","termid":"PBO:0077339"}


id: GO:0042200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyanuric acid, a potential degradation product of triazine herbicides.","definition_xrefs":["UM-BBD_pathwayID:cya"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanuric acid metabolic process","termid":"GO:0042199"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"cyanuric acid catabolic process","synonyms":[{"name":"cyanuric acid breakdown","type":"exact"},{"name":"cyanuric acid catabolism","type":"exact"},{"name":"cyanuric acid degradation","type":"exact"}],"termid":"GO:0042200"}


id: PBO:0016105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase Qns1 (predicted)","termid":"PBO:0016105"}


id: GO:0060177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving angiotensin.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angiotensin metabolic process","synonyms":[{"name":"regulation of angiotensin metabolism","type":"exact"}],"termid":"GO:0060177"}


id: GO:0106068
data:
  {"annotated_genes":["SJAG_01332","SJAG_01776","SJAG_04932","SJAG_00213","SJAG_03436","SJAG_03702","SJAG_05323","SJAG_02545"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84075,85084,102416,114042,113764,85783,113414,107632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030915"}]},"cv_name":"cellular_component","definition":"A protein ligase complex that enables protein sumoylation. Consists of a SUMO-protein transferase and other proteins that may confer substrate specificity of the complex.","definition_xrefs":["PMID:16847351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00213":null,"SJAG_01332":null,"SJAG_01776":null,"SJAG_02545":null,"SJAG_03436":null,"SJAG_03702":null,"SJAG_04932":null,"SJAG_05323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SUMO ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SUMO transferase complex","type":"exact"},{"name":"SUMO-protein ligase complex","type":"exact"},{"name":"Sumoylation complex","type":"exact"}],"termid":"GO:0106068","terms_by_termid":{"GO:0030915":null}}


id: PBO:0044047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 1","termid":"PBO:0044047"}


id: GO:0033698
data:
  {"annotated_genes":["SJAG_03867","SJAG_02981","SJAG_02439","SJAG_00868","SJAG_03441","SJAG_03230","SJAG_02846","SJAG_04758","SJAG_00441","SJAG_01230","SJAG_00581","SJAG_04576","SJAG_03255"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74747,77616,85139,90683,91494,98879,99963,100830,101138,102861,105594,106609,110390],"is_not":false,"summary":null,"term":"GO:0033698"}]},"cv_name":"cellular_component","definition":"A histone deacetylase complex which deacetylates histones preferentially in promoter regions. Composed of a two copies of catalytic histone deacetylase subunit (S. pombe Clr6/ S. cerevisiae Rpd3p), an Sds-3 family protein (S. pombe /S. cerevisiae Sds3(p) ), two copies of SIN3 family co-repressor (S. pombe Pst1/ S. cerevisiae Sin3p, a WD repeat protein/ histone chaperone (S. pombe Prw1/ S. cerevisiae Ume1p), and a zf- PHD finger ( S. pombe Png2/ S. cerevisiae Pho23p), plus 4 additional subunits, and associated factors.","definition_xrefs":["GOC:vw","PMID:17450151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sin3-type complex","termid":"GO:0070822"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_01230":null,"SJAG_02439":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03867":null,"SJAG_04576":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0005654","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Rpd3L complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000508"],"synonyms":[{"name":"Clr6 histone deacetylase complex I/I'","type":"exact"},{"name":"Clr6L complex","type":"exact"},{"name":"Rpd3C(L)","type":"exact"},{"name":"Sin3L complex","type":"exact"}],"termid":"GO:0033698","terms_by_termid":{"GO:0033698":null}}


id: FYPO:0004402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to JM216 (also called satraplatin). Cells stop growing (and may die) at a concentration of JM216 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to JM216","synonyms":[{"name":"hypersensitive to JM216","type":"exact"},{"name":"sensitive to JM216 during mitotic cell cycle","type":"related"},{"name":"sensitive to JM216 during vegetative growth","type":"exact"},{"name":"sensitive to satraplatin","type":"exact"}],"termid":"FYPO:0004402"}


id: PBO:0050327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 29","termid":"PBO:0050327"}


id: PBO:0017025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial microtubule binder Mmb1","termid":"PBO:0017025"}


id: PBO:0082367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR domain protein that localizes to early and late Golgi vesicles; required for adaptation to varying nutrient concentrations, fluid-phase endocytosis, polarization of the actin cytoskeleton, and vacuole biogenesis","termid":"PBO:0082367"}


id: SO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the reduction of a the 5'UTR with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_truncation","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"5 prime UTR truncation","type":"exact"},{"name":"Jannovar:5_prime_utr_truncation","type":"exact"},{"name":"snpEff:UTR_5_DELETED","type":"exact"}],"termid":"SO:0002013"}


id: PBO:0011509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome BAR domain protein Pil1","termid":"PBO:0011509"}


id: PBO:0061327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B5","termid":"PBO:0061327"}


id: PBO:0039927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF28 pseudogene 1","termid":"PBO:0039927"}


id: PBO:0045883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 7","termid":"PBO:0045883"}


id: PBO:0088759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase Pcy1","termid":"PBO:0088759"}


id: GO:0000171
data:
  {"annotated_genes":["SJAG_04582","SJAG_03952","SJAG_04916","SJAG_01623","SJAG_03234","SJAG_01551","SJAG_02553","SJAG_03425","SJAG_00955","SJAG_02547","SJAG_06613","SJAG_03796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90752,92561,92857,95574,100668,100889,101777,101778,109648,111472,111559,114767],"is_not":false,"summary":null,"term":"GO:0000171"}]},"cv_name":"molecular_function","definition":"Catalysis of the site-specific cleavage of RNA by a catalytic RNA-mediated mechanism; substrates include the A3 site in the ITS1 of pre-rRNA.","definition_xrefs":["PMID:17881380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00955":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"ribonuclease MRP activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:RNase_MRP"],"synonyms":[{"name":"RNase MRP","type":"exact"}],"termid":"GO:0000171","terms_by_termid":{"GO:0000171":null}}


id: FYPO:0004403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of JM216 (also called satraplatin) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to JM216","synonyms":[{"name":"resistance to JM216 during mitotic cell cycle","type":"related"},{"name":"resistance to JM216 during vegetative growth","type":"exact"},{"name":"resistance to satraplatin","type":"exact"},{"name":"resistant to JM216","type":"exact"}],"termid":"FYPO:0004403"}


id: PBO:0061657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear mitotic apparatus protein 1","termid":"PBO:0061657"}


id: PBO:0082957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein involved in mitochondrial function or organization; null mutant displays reduced frequency of mitochondrial genome loss; potential Hsp82p interactor","termid":"PBO:0082957"}


id: PBO:0003978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazoleglycerol-phosphate dehydratase His5","termid":"PBO:0003978"}


id: PBO:0059403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33","termid":"PBO:0059403"}


id: PBO:0028402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_respiratory_electron_transport","termid":"PBO:0028402"}


id: PBO:0080064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 1","termid":"PBO:0080064"}


id: FYPO:0005119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a mutation causes a gene product to bind to one or more proteins with different specificity from normal. For example, a protein may bind to a protein in a mutant that it does not bind in wild type. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:25487150","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"altered protein binding specificity","synonyms":[{"name":"abnormal protein binding specificity","type":"exact"},{"name":"altered protein-protein interaction specificity","type":"exact"}],"termid":"FYPO:0005119"}


id: GO:0007433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination in a larval organism of where the salivary gland forms, the total number of salivary gland cells and how many cells are allocated to each of the specialised cell types within the salivary gland.","definition_xrefs":["GOC:tb","PMID:11598957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland boundary specification","termid":"GO:0007432"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval salivary gland boundary specification","synonyms":[{"name":"larval salivary gland determination","type":"broad"}],"termid":"GO:0007433"}


id: PBO:0061157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NmrA like redox sensor 2, pseudogene","termid":"PBO:0061157"}


id: PR:Q9P6M7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug99 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6M7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 99 protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.04","synonyms":[{"name":"Spom972h-mug99","type":"exact"}],"termid":"PR:Q9P6M7"}


id: GO:1903968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a micafungin stimulus.","definition_xrefs":["PMID:16928959","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to micafungin","termid":"GO:1903967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to micafungin","termid":"GO:1903968"}


id: PBO:0035703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K16_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0035703"}


id: FYPO:0001268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore","termid":"FYPO:0005209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during vegetative growth","synonyms":[{"name":"abnormal protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"abnormal protein localization to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001268"}


id: FYPO:0002917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"},{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"},{"relation_name":"is_a","term_name":"abolished protein lysine methylation during vegetative growth","termid":"FYPO:0004488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 methylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002917"}


