# terms

id: PBO:0057763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR2052 host gene","termid":"PBO:0057763"}


id: PATO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000194 spontaneous_activity (obsolete PATO:0000194)","termid":"PATO:0000194"}


id: GO:0120297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dopamine + L-glutaminyl-[histone] = 5-dopaminyl-L-glutamyl-[histone] + NH4(+).","definition_xrefs":["GOC:sp","PMID:32273471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide dopaminyltransferase activity","termid":"GO:0120296"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"histone dopaminyltransferase activity","secondary_identifiers":["RHEA:66556"],"termid":"GO:0120297"}


id: PBO:0082219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-adaptin; large subunit of the clathrin associated protein complex (AP-2); involved in vesicle mediated transport","termid":"PBO:0082219"}


id: GO:1904794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of euchromatin binding.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","GOC:BHF","GOC:TermGenie","GO_REF:0000059","PMID:22723415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chromatin binding","termid":"GO:0035562"},{"relation_name":"is_a","term_name":"regulation of euchromatin binding","termid":"GO:1904793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of euchromatin binding","synonyms":[{"name":"down regulation of euchromatin binding","type":"exact"},{"name":"down-regulation of euchromatin binding","type":"exact"},{"name":"downregulation of euchromatin binding","type":"exact"},{"name":"inhibition of euchromatin binding","type":"narrow"}],"termid":"GO:1904794"}


id: PBO:0038778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activin A receptor type 1C","termid":"PBO:0038778"}


id: FYPO:0000269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a microtubule-destabilizing substance. Cells stop growing (and may die) at a concentration of a microtubule-depolymerizing drug that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to microtubule depolymerizing drugs","synonyms":[{"name":"hypersensitive to microtubule depolymerizing drugs","type":"exact"},{"name":"sensitive to microtubule depolymerizing drugs during mitotic cell cycle","type":"related"},{"name":"sensitive to microtubule depolymerizing drugs during vegetative growth","type":"exact"}],"termid":"FYPO:0000269"}


id: GO:0010982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of high-density lipoprotein particle clearance. High-density lipoprotein particle clearance is the process in which a high-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"regulates","term_name":"high-density lipoprotein particle clearance","termid":"GO:0034384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of high-density lipoprotein particle clearance","termid":"GO:0010982"}


id: GO:0098023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The basal end of the virus tail, which is used by the virus to attach to the host cell.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, tip","synonyms":[{"name":"bacteriophage tail tip","type":"narrow"}],"termid":"GO:0098023"}


id: GO:0030418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotianamine, 2(S),3'2(S),3''(S)-N-(N-(3-amino-3-carboxypropyl)-3-amino-3-carboxypropyl)-azetidine-2-carboxylic acid.","definition_xrefs":["PMID:10069850","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"nicotianamine metabolic process","termid":"GO:0030417"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"nicotianamine biosynthetic process","synonyms":[{"name":"nicotianamine anabolism","type":"exact"},{"name":"nicotianamine biosynthesis","type":"exact"},{"name":"nicotianamine formation","type":"exact"},{"name":"nicotianamine synthesis","type":"exact"}],"termid":"GO:0030418"}


id: PBO:0061233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP10 ribonucleoprotein","termid":"PBO:0061233"}


id: PBO:0017820
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caffeine Induced cell Death","termid":"PBO:0017820"}


id: PR:O13855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1A6.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.01c","synonyms":[{"name":"Spom972h-SPAC1A6.01c","type":"exact"}],"termid":"PR:O13855"}


id: GO:0004517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+.","definition_xrefs":["EC:1.14.13.39","RHEA:19897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitric-oxide synthase activity","secondary_identifiers":["MetaCyc:NITRIC-OXIDE-SYNTHASE-RXN","Reactome:R-HSA-202127","Reactome:R-HSA-418436"],"synonyms":[{"name":"L-arginine,NADPH:oxygen oxidoreductase (nitric-oxide-forming) activity","type":"related"},{"name":"NADPH-diaphorase activity","type":"related"},{"name":"NO synthase activity","type":"related"},{"name":"endothelium-derived relaxation factor-forming enzyme activity","type":"related"},{"name":"endothelium-derived relaxing factor synthase activity","type":"related"},{"name":"nitric oxide synthase activity","type":"exact"},{"name":"nitric oxide synthetase activity","type":"related"},{"name":"nitric-oxide synthetase activity","type":"related"}],"termid":"GO:0004517"}


id: PBO:0078318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta diversity 3","termid":"PBO:0078318"}


id: PBO:0085804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; deletion mutant shows strong genetic interaction with cdc28-as1 mutant in the presence of 1-NM-PP1; DCV1 has a paralog, YOL019W, that arose from the whole genome duplication","termid":"PBO:0085804"}


id: GO:0000082
data:
  {"annotated_genes":["SJAG_01187","SJAG_03048","SJAG_01401","SJAG_00100","SJAG_00991","SJAG_02404","SJAG_01311","SJAG_01210","SJAG_03591","SJAG_02723","SJAG_02810","SJAG_04140","SJAG_00169","SJAG_01825","SJAG_02026","SJAG_03681","SJAG_05346","SJAG_00996","SJAG_03699","SJAG_00071","SJAG_03160"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98451,104484,108181,111641],"is_not":false,"summary":null,"term":"GO:0000082"},{"annotations":[112068,97704,84977,98454,105018],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031568"},{"annotations":[87330,105806],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031571"},{"annotations":[105019,84978,87761,89360,94951,88180],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000134"},{"annotations":[105315,102084,98469,101930,102768,113249,97706],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900087"},{"annotations":[87765,102085,113251],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000045"},{"annotations":[112070,97708,102087,105024,107345,111502,87767],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle transition by which a cell in G1 commits to S phase. The process begins with the build up of G1 cyclin-dependent kinase (G1 CDK), resulting in the activation of transcription of G1 cyclins. The process ends with the positive feedback of the G1 cyclins on the G1 CDK which commits the cell to S phase, in which DNA replication is initiated.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle phase transition","termid":"GO:0044772"},{"relation_name":"is_a","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00100":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01187":null,"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02026":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044772"],"is_obsolete":false,"name":"G1/S transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000082","terms_by_termid":{"GO:0000082":null,"GO:0007089":null,"GO:0031568":null,"GO:0031571":null,"GO:1900087":null,"GO:2000045":null,"GO:2000134":null}}


id: GO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the transition from the initiation to the elongation phases of transcription by a DNA-dependent RNA polymerase, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase and making contacts with elongation specific factors.","definition_xrefs":["PMID:18280161","PMID:15020047","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"promoter clearance during DNA-templated transcription","secondary_identifiers":["GO:0001122"],"synonyms":[{"name":"promoter clearance during DNA-dependent transcription","type":"exact"},{"name":"promoter clearance from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"promoter escape","type":"broad"}],"termid":"GO:0001109"}


id: GO:0100064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by transcription from RNA polymerase II promoter (obsolete GO:0100064)","termid":"GO:0100064"}


id: GO:0033126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of GTP catabolic process (obsolete GO:0033126)","synonyms":[{"name":"positive regulation of GTP breakdown","type":"exact"},{"name":"positive regulation of GTP catabolism","type":"exact"},{"name":"positive regulation of GTP degradation","type":"exact"}],"termid":"GO:0033126"}


id: GO:0018625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: naphthalene + NADH + H+ + O2 = (1R,2S)-1,2-dihydronaphthalene-1,2-diol + NAD+.","definition_xrefs":["EC:1.14.12.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"naphthalene 1,2-dioxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:r0334","MetaCyc:NAPHTHALENE-12-DIOXYGENASE-RXN","RHEA:19173"],"synonyms":[{"name":"naphthalene dioxygenase activity","type":"related"},{"name":"naphthalene oxygenase activity","type":"related"},{"name":"naphthalene,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"}],"termid":"GO:0018625"}


id: PBO:0068139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 446","termid":"PBO:0068139"}


id: PBO:0066576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB like 1","termid":"PBO:0066576"}


id: GO:0009711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine alkaloids, compounds derived from purine and composed of an N-containing double ring structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"purine alkaloid metabolic process","termid":"GO:0046446"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"purine alkaloid biosynthetic process","synonyms":[{"name":"purine alkaloid anabolism","type":"exact"},{"name":"purine alkaloid biosynthesis","type":"exact"},{"name":"purine alkaloid formation","type":"exact"},{"name":"purine alkaloid synthesis","type":"exact"}],"termid":"GO:0009711"}


id: PBO:0045554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 6","termid":"PBO:0045554"}


id: PBO:0027833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_septum_edging_catabolic_process","termid":"PBO:0027833"}


id: GO:1990625
data:
  {"annotated_genes":["SJAG_03869","SJAG_00169","SJAG_00786","SJAG_00690","SJAG_01942","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88537,88840,90408,95414,105808,111777],"is_not":false,"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of cytoplasmic translation initiation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["PMID:12242291","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation in response to stress","termid":"GO:1990611"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0008150","GO:0002181","GO:0010467"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990625","terms_by_termid":{"GO:1990625":null}}


id: PBO:0034581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transport_along_microtubule","termid":"PBO:0034581"}


id: PBO:0011127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule (predicted), DUF1773 family protein 1","termid":"PBO:0011127"}


id: GO:0002590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class I.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002584"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002589"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"down regulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"down-regulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"downregulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"inhibition of antigen processing and presentation of peptide antigen via MHC class I","type":"narrow"},{"name":"negative regulation of peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0002590"}


id: GO:0015871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of choline into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"choline transport","termid":"GO:0015871"}


id: PBO:0085197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Osmotic stress-responsive phosphorelay intermediate sensor protein; phosphorylated by the plasma membrane sensor Sln1p in response to osmotic stress and then in turn phosphorylates the response regulators Ssk1p in the cytosol and Skn7p in the nucleus","termid":"PBO:0085197"}


id: PBO:0075872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL1 divergent transcript","termid":"PBO:0075872"}


id: PBO:0062317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 2","termid":"PBO:0062317"}


id: GO:0043466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic conversion of pyrimidine nucleobases, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase catabolic process","termid":"GO:0006208"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"pyrimidine nucleobase fermentation","synonyms":[{"name":"pyrimidine base fermentation","type":"exact"},{"name":"pyrimidine fermentation","type":"related"}],"termid":"GO:0043466"}


id: PBO:0077515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 231","termid":"PBO:0077515"}


id: PBO:0052724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 16","termid":"PBO:0052724"}


id: PBO:0038496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 6","termid":"PBO:0038496"}


id: GO:0097477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a lateral motor column neuron from one site to another. A lateral motor column neuron is a motor neuron that is generated only on limb levels and send axons into the limb mesenchyme.","definition_xrefs":["CL:0011002","GOC:yaf","PMID:20711475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron migration","termid":"GO:0097476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral motor column neuron migration","termid":"GO:0097477"}


id: PBO:0060515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase","termid":"PBO:0060515"}


id: PBO:0038911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F1","termid":"PBO:0038911"}


id: PBO:0011459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, predicted helix turn helix","termid":"PBO:0011459"}


id: PBO:0062427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 87 pseudogene","termid":"PBO:0062427"}


id: PBO:0049825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparin binding growth factor","termid":"PBO:0049825"}


id: PBO:0050876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma","termid":"PBO:0050876"}


id: PBO:0111332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L7-like protein involved in ribosome biogenesis","termid":"PBO:0111332"}


id: PBO:0046695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine-phosphate phospho-lyase","termid":"PBO:0046695"}


id: FYPO:0005489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the vacuolar membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to vacuole","termid":"FYPO:0005514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to vacuolar membrane","synonyms":[{"name":"ectopic protein localization to vacuolar membrane","type":"exact"},{"name":"protein mislocalised to vacuolar membrane","type":"exact"},{"name":"protein mislocalised to vacuolar membrane during vegetative growth","type":"exact"},{"name":"protein mislocalized to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to vacuolar membrane during vegetative growth","type":"exact"},{"name":"protein mislocalized to vacuole membrane","type":"exact"}],"termid":"FYPO:0005489"}


id: PR:Q9P4X1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P4X1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C959.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.05c","synonyms":[{"name":"Spom972h-pdi4","type":"exact"},{"name":"protein disulfide isomerase C959.05c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P4X1"}


id: PBO:0066667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPOR3 antisense RNA 1","termid":"PBO:0066667"}


id: GO:0110166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitochondrial DNA replication.","definition_xrefs":["PMID:28408491","PMID:29931097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"},{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"part_of","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"DNA synthesis involved in mitochondrial DNA replication","synonyms":[{"name":"DNA biosynthetic process involved in mitochondrial DNA replication","type":"exact"}],"termid":"GO:0110166"}


id: PBO:0058974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid leukemia factor 1","termid":"PBO:0058974"}


id: PBO:0052154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 3","termid":"PBO:0052154"}


id: MOD:01477
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to an 3'-fluoro-L-fluorophenylalanine.","definition_xrefs":["PubMed:18688235","PubMed:8172898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-phenylalanine","termid":"MOD:01227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-fluoro-L-phenylalanine","synonyms":[{"name":"3-fluorophenylalanine","type":"exact"},{"name":"m-fluorophenylalanine","type":"exact"},{"name":"meta-fluorophenylalanine","type":"exact"}],"termid":"MOD:01477"}


id: PBO:0073681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 3","termid":"PBO:0073681"}


id: GO:0016211
data:
  {"annotated_genes":["SJAG_00359","SJAG_01845"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60886,90316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004356"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of ammonia (NH3) to another substance via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_01845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"ammonia ligase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0016211","terms_by_termid":{"GO:0004356":null}}


id: PBO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as ncRNA","termid":"PBO:0000406"}


id: PBO:0047480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 7","termid":"PBO:0047480"}


id: GO:2001305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a xanthone-containing compound.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"xanthone-containing compound metabolic process","synonyms":[{"name":"xanthone metabolism","type":"narrow"},{"name":"xanthone-containing compound metabolism","type":"exact"},{"name":"xanthones metabolic process","type":"exact"},{"name":"xanthones metabolism","type":"exact"}],"termid":"GO:2001305"}


id: PR:000085729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 but not phosphorylated on Ser-10. Example: UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:19362535","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me:(K9),UnPhos(S10)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K9-methylated and unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K9MeUnPhos:1","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"hht1/Me:(K9),UnPhos(S10)","type":"exact"}],"termid":"PR:000085729"}


id: GO:0051556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leucoanthocyanidins, a class of colorless intermediates in the biosynthetic pathway of the pigmented flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"leucoanthocyanidin metabolic process","secondary_identifiers":["MetaCyc:PWY1F-823"],"synonyms":[{"name":"leucoanthocyanidin metabolism","type":"exact"}],"termid":"GO:0051556"}


id: PBO:0069831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1117, pseudogene","termid":"PBO:0069831"}


id: PBO:0052273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5A","termid":"PBO:0052273"}


id: GO:0007389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:go_curators","ISBN:0521436125","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification process","synonyms":[{"name":"pattern biosynthesis","type":"related"},{"name":"pattern formation","type":"related"}],"termid":"GO:0007389"}


id: PBO:0086204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; SWAT-GFP and mCherry fusion proteins localize to the mitochondria; involved in maintenance of telomere length","termid":"PBO:0086204"}


id: PBO:0003700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Ngg1","termid":"PBO:0003700"}


id: PBO:0038679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 5","termid":"PBO:0038679"}


id: FYPO:0001213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man8GlcNAc2 measured in a cell is higher than normal. Man8GlcNAc2 is any N-glycan that consists of a branched ten-membered mannooligosaccharide containing eight D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["CHEBI:64048","PMID:9813085","CHEBI:64052","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased Man8GlcNAc level","synonyms":[{"name":"increased Man8GlcNAc accumulation","type":"related"},{"name":"increased Man8GlcNAc level during mitotic cell cycle","type":"related"},{"name":"increased Man8GlcNAc level during vegetative growth","type":"exact"},{"name":"increased Man8GlcNAc2 level","type":"exact"},{"name":"increased cellular Man8GlcNAc level","type":"exact"}],"termid":"FYPO:0001213"}


id: PBO:0045585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 7","termid":"PBO:0045585"}


id: PR:O94385
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pom152 gene.","definition_xrefs":["UniProtKB:O94385","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin pom152 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.07","synonyms":[{"name":"Spom972h-pom152","type":"exact"}],"termid":"PR:O94385"}


id: GO:0004936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of alpha-adrenergic receptors.","definition_xrefs":["IUPHAR_GPCR:1274","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor activity","termid":"GO:0004935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"alpha-adrenergic receptor activity","synonyms":[{"name":"alpha adrenoceptor","type":"exact"}],"termid":"GO:0004936"}


id: FYPO:0004452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is decreased following a calcium ion stimulus.","definition_xrefs":["PMID:25081204","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased transcription from CDRE promoter in response to calcium ion","synonyms":[{"name":"decreased transcription from CDRE promoter in response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CDRE promoter in response to calcium ion during vegetative growth","type":"exact"},{"name":"reduced transcription from CDRE promoter in response to calcium ion","type":"exact"}],"termid":"FYPO:0004452"}


id: PBO:0055273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2700","termid":"PBO:0055273"}


id: GO:0044567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, multimeric protein complex which catalyzes the biosynthesis of cellulose for the plant primary cell wall. In Arabidopsis, contains the essential component proteins CESA1 and -3, and a CESA6-related protein.","definition_xrefs":["GOC:mengo_curators","PMID:21307367","GOC:tt","PMID:17878302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose synthase complex","termid":"GO:0010330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"primary cell wall cellulose synthase complex","synonyms":[{"name":"primary cell wall CESA complex","type":"exact"},{"name":"primary cell-wall cellulose synthase complex","type":"exact"}],"termid":"GO:0044567"}


id: FYPO:0000880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"},{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000879"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000880"}


id: PBO:0067122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 167, pseudogene","termid":"PBO:0067122"}


id: PBO:0063308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycomb group ring finger 2","termid":"PBO:0063308"}


id: PR:O74969
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity glucose transporter ght2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.08","synonyms":[{"name":"Spom972h-ght2","type":"exact"},{"name":"hexose transporter 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74969"}


id: PBO:0085346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; hydrolyzes phosphatidylinositol and phosphatidylserine and displays transacylase activity in vitro; PLB3 has a paralog, PLB1, that arose from the whole genome duplication","termid":"PBO:0085346"}


id: PBO:0016100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex GTPase subunit Gem1 (predicted)","termid":"PBO:0016100"}


id: GO:0160043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of catecholamine by a cell in which the catecholamine acts as a neurotransmitter.","definition_xrefs":["PMID:10191060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"}


id: GO:0015680
data:
  {"annotated_genes":["SJAG_03231","SJAG_00449","SJAG_04553"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98216,100824,103613],"is_not":false,"summary":null,"term":"GO:0015680"}]},"cv_name":"biological_process","definition":"A process that contributes to the delivery of copper ions to a target protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_03231":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"protein maturation by copper ion transfer","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intracellular copper delivery","type":"exact"},{"name":"intracellular copper ion delivery","type":"related"},{"name":"intracellular copper ion transport","type":"broad"}],"termid":"GO:0015680","terms_by_termid":{"GO:0015680":null}}


id: GO:0140215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed import of D-aspartate from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:27663541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"D-aspartate import across plasma membrane","termid":"GO:0070779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of D-aspartate import across plasma membrane","termid":"GO:0140215"}


id: PBO:0053433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 378","termid":"PBO:0053433"}


id: PBO:0031611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_vacuolar_transport","termid":"PBO:0031611"}


id: PBO:0074890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 65C","termid":"PBO:0074890"}


id: PBO:0087884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor; recruits the Cyc8p-Tup1p complex to promoters; mediates glucose repression and negatively regulates a variety of processes including filamentous growth and alkaline pH response; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0087884"}


id: GO:0010034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetate stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acetate","termid":"GO:0010034"}


id: GO:1990401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the embryonic phase whose specific outcome is the progression of the lung over time, from its formation to the mature structure.","definition_xrefs":["PMID:24785085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic lung development","termid":"GO:1990401"}


id: GO:0007342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a sperm, with the plasma membrane of the oocyte as part of the process of single fertilization. In sperm with flagella, binding occurs at the posterior (post-acrosomal) region of the sperm head.","definition_xrefs":["PMID:17644969","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"plasma membrane fusion","termid":"GO:0045026"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"fusion of sperm to egg plasma membrane involved in single fertilization","synonyms":[{"name":"sperm-oocyte fusion","type":"narrow"}],"termid":"GO:0007342"}


id: PBO:0087352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spliceosome-associated protein that is required for pre-mRNA splicing; necessary for Prp2p function at the first catalytic step of splicing; has similarity to S. pombe Cwf22p; CWC22 is an essential protein","termid":"PBO:0087352"}


id: PBO:0085819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum and mCherry fusion protein localizes to the vacuole","termid":"PBO:0085819"}


id: PBO:0062289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily L member 2","termid":"PBO:0062289"}


id: FYPO:0003568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of a spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the nucleus. An open fenestra remains present in the nuclear envelope.","definition_xrefs":["PomBase:mah","PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","synonyms":[{"name":"SPB unanchored to nuclear envelope","type":"related"},{"name":"abnormal establishment of mitotic spindle pole body localization to nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during vegetative growth","type":"exact"},{"name":"spindle pole body in nucleoplasm, unanchored to nuclear envelope","type":"related"},{"name":"spindle pole body unanchored to nuclear envelope","type":"related"},{"name":"unanchored spindle pole bodies","type":"related"}],"termid":"FYPO:0003568"}


id: GO:0072729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Gentian violet stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to Gentian violet","termid":"GO:0072728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to Gentian violet","synonyms":[{"name":"cellular response to crystal violet","type":"exact"},{"name":"cellular response to {4-[Bis-(4-dimethylamino-phenyl)-methylene]-cyclohexa-2,5-dienylidene}-dimethyl-ammonium chloride","type":"exact"}],"termid":"GO:0072729"}


id: GO:0048020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR chemokine receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"CCR chemokine receptor binding","synonyms":[{"name":"CCR chemokine receptor ligand","type":"narrow"},{"name":"beta chemokine receptor binding","type":"exact"},{"name":"beta chemokine receptor ligand","type":"narrow"}],"termid":"GO:0048020"}


id: PBO:0075683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid receptor RNA activator 1","termid":"PBO:0075683"}


id: PBO:0054303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1695","termid":"PBO:0054303"}


id: PBO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis","termid":"PBO:0000123"}


id: PR:P36603
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase small chain that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:20516199","PMID:12867051","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase small chain (Schizosaccharomyces pombe)","termid":"PR:000036299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase small chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.04","secondary_identifiers":["PR:000027714","UniProtKB:P36603"],"synonyms":[{"name":"SPBC25D12.04","type":"related"},{"name":"SUC22","type":"related"},{"name":"Spom972h-suc22","type":"exact"}],"termid":"PR:P36603"}


id: GO:0043486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PMID:11735001","PMID:15066277","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone exchange (obsolete GO:0043486)","synonyms":[{"name":"histone chaperone","type":"related"},{"name":"histone replacement","type":"exact"}],"termid":"GO:0043486"}


id: PBO:0088761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ER associated ubiquitin-dependent protein catabolic process Vms1","termid":"PBO:0088761"}


id: PBO:0085859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YLR108C is not an esssential gene; protein abundance increases in response to DNA replication stress; YLR108C has a paralog, YDR132C, that arose from the whole genome duplication","termid":"PBO:0085859"}


id: PBO:0075792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 11","termid":"PBO:0075792"}


id: RO:0008504
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of kleptoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kleptoparasitized_by","termid":"RO:0008504"}


id: GO:0046197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen and synthesized by some higher plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orcinol metabolic process","termid":"GO:0018940"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orcinol biosynthetic process","synonyms":[{"name":"orcinol anabolism","type":"exact"},{"name":"orcinol biosynthesis","type":"exact"},{"name":"orcinol formation","type":"exact"},{"name":"orcinol synthesis","type":"exact"}],"termid":"GO:0046197"}


id: PBO:0082545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein with similarity to glucanases; may play a role in conjugation during mating based on its regulation by Ste12p","termid":"PBO:0082545"}


id: GO:0098657
data:
  {"annotated_genes":["SJAG_00970","SJAG_04830","SJAG_00800","SJAG_00546","SJAG_03086","SJAG_03119","SJAG_03145","SJAG_04673","SJAG_01258","SJAG_01748","SJAG_02511","SJAG_03250","SJAG_02320","SJAG_01017","SJAG_03146","SJAG_04051","SJAG_04343","SJAG_04554","SJAG_05296","SJAG_04100","SJAG_02877","SJAG_00057","SJAG_01268","SJAG_04465","SJAG_04246","SJAG_02883","SJAG_03960","SJAG_03088","SJAG_00104","SJAG_00521","SJAG_03072","SJAG_00649","SJAG_01732","SJAG_02177","SJAG_02805","SJAG_04931","SJAG_00137","SJAG_03595","SJAG_03970","SJAG_03591","SJAG_01379","SJAG_02707","SJAG_01373","SJAG_00907","SJAG_02834","SJAG_03631","SJAG_02780","SJAG_01090","SJAG_04050","SJAG_02384","SJAG_03010","SJAG_03608","SJAG_03596","SJAG_04466","SJAG_05175","SJAG_02463","SJAG_02968","SJAG_03643","SJAG_02245","SJAG_04905","SJAG_03404","SJAG_01964","SJAG_03777","SJAG_04479","SJAG_04509","SJAG_01493","SJAG_02789","SJAG_01406","SJAG_04724","SJAG_01981","SJAG_02626","SJAG_00700","SJAG_01353","SJAG_02282","SJAG_04886","SJAG_04714","SJAG_04001","SJAG_04517","SJAG_04668","SJAG_04644","SJAG_00152","SJAG_02572","SJAG_02166","SJAG_00922","SJAG_02779","SJAG_01660","SJAG_03137","SJAG_03581","SJAG_02605","SJAG_01722","SJAG_04457","SJAG_04551","SJAG_02848","SJAG_03718","SJAG_01167","SJAG_00355","SJAG_02075","SJAG_05011","SJAG_03465","SJAG_03504","SJAG_00114","SJAG_02857","SJAG_00803","SJAG_04718","SJAG_00032","SJAG_03044","SJAG_04185","SJAG_02228","SJAG_04052","SJAG_01384","SJAG_02684","SJAG_02735","SJAG_04506","SJAG_00991","SJAG_00402","SJAG_05209","SJAG_01983","SJAG_04637","SJAG_01030","SJAG_05198","SJAG_05346","SJAG_00185","SJAG_00514","SJAG_03268","SJAG_04666","SJAG_00845","SJAG_02104","SJAG_01686","SJAG_05229","SJAG_01206","SJAG_03987","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[70801,88082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[88423,95710,88370,110591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[104466,107804,108461,92332,104188,106829,88607,115047,98840,86328,90935,87565,113698,107824,107742,109062,102137,92351,101833,88228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072583"},{"annotations":[83975,110743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[113386,110334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[88083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905136"},{"annotations":[99116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[106400,101278,83926,95945,98213,99172,94987,93661,102031,114669,107644,84160,108315,111041,96038,90284,90838,113699,83669,95552,101261,87524,85858,108338,93991,105200,114329,115008,103684,95403,103011,86706,86777,108019,102971,90087,99420,95766,84188,104332,97802,105107,97531,103287,99363,112389,90061,104870,95794,98863,89918,106318,100727,112361,94914,98610,92975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006897"},{"annotations":[84025],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120207"},{"annotations":[106788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[88511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140270"},{"annotations":[91576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[108694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[96441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[96442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[97738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"},{"annotations":[97739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098715"},{"annotations":[91822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[88594,94117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"},{"annotations":[87240,109515],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[90622],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045806"},{"annotations":[84123],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[84124],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[112164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[104417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"},{"annotations":[98239],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[99813],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045807"},{"annotations":[87763,89362,106676,94954],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[94955,87764,89363],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[89364],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[85544,93063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990573"},{"annotations":[97298,96435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"},{"annotations":[72054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031623"},{"annotations":[115030,107816,107161],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000369"},{"annotations":[88731,85903,77191,86988,99038,76197,109518,88447,109391],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030100"},{"annotations":[106920,61453,61556,106919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[97741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"},{"annotations":[91824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"},{"annotations":[96427,106258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[104112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[96762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[99119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"},{"annotations":[88229,107167,108462,92352,101834,113701,115040,104189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070086"},{"annotations":[84481,91590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"},{"annotations":[100290,109369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"}]},"cv_name":"biological_process","definition":"The directed movement of some substance from outside of a cell into a cell. 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id: GO:0004202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-2 activity (obsolete GO:0004202)","synonyms":[{"name":"caspase-2 activity","type":"exact"}],"termid":"GO:0004202"}


id: RO:0002516
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has start sequence y if the start of x is identical to the start of y, and x has y as a subsequence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_subsequence","termid":"RO:0002524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_start_sequence","termid":"RO:0002516"}


id: PBO:0075412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPACA7 family member B, pseudogene","termid":"PBO:0075412"}


id: PBO:0030343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_MCM_complex_assembly","termid":"PBO:0030343"}


id: PBO:0072363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 49","termid":"PBO:0072363"}


id: GO:0004526
data:
  {"annotated_genes":["SJAG_04916","SJAG_04582","SJAG_02553","SJAG_01623","SJAG_00306","SJAG_03234","SJAG_00955","SJAG_03796","SJAG_06613"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90753,92858,95575,98144,100669,100890,109649,111473,114768],"is_not":false,"summary":null,"term":"GO:0004526"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor.","definition_xrefs":["EC:3.1.26.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific ribonuclease activity","termid":"GO:0004549"},{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00955":null,"SJAG_01623":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016788","GO:0140101","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"ribonuclease P activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.26.5-RXN","Reactome:R-HSA-5696810","Wikipedia:RNase_P"],"synonyms":[{"name":"RNase P","type":"exact"},{"name":"tRNA 5' leader endonuclease activity","type":"exact"}],"termid":"GO:0004526","terms_by_termid":{"GO:0004526":null}}


id: GO:0021927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to deep nuclear neurons.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","GOC:cls","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deep nuclear neuron precursor proliferation","termid":"GO:0021927"}


id: PBO:0085587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in assembly of the RNA Pol III complex; high copy suppressor of Pol III assembly mutation and psk1 psk2 mutations that confer temperature-sensitivity for galactose utilization; physically interacts with Pol III; proposed to bind single-stranded nucleic acids via its R3H domain; capable of forming the prion [VTS1+]","termid":"PBO:0085587"}


id: GO:0034534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-methylnaphthalene + NADH + H+ + O2 = 1-hydroxymethylnaphthalene + NAD+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r0795"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-methylnaphthalene hydroxylase activity (obsolete GO:0034534)","termid":"GO:0034534"}


id: PBO:0087487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of COMPASS (Set1C); a complex which methylates histone H3 on lysine 4 and is required in telomeric transcriptional silencing; promotes meiotic DSB formation by interacting with H3K4me3 and Rec107p, a protein required for Spo11p-catalyzed DSB formation located on chromosome axes; interacts with Orc2p; PHD finger domain protein similar to human CGBP, an unmethylated CpG binding protein; relocalizes to cytosol in response to hypoxia","termid":"PBO:0087487"}


id: PBO:0062050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily U member 2 pseudogene","termid":"PBO:0062050"}


id: PBO:0054318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1710","termid":"PBO:0054318"}


id: PBO:0071388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 11","termid":"PBO:0071388"}


id: PBO:0075503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated serine rich 1","termid":"PBO:0075503"}


id: PBO:0057019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 106b","termid":"PBO:0057019"}


id: PBO:0043337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN6 transmembrane ER protein","termid":"PBO:0043337"}


id: GO:0060991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in cytokinesis.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete lipid tube assembly involved in cytokinesis (obsolete GO:0060991)","synonyms":[{"name":"lipid tube assembly involved in cytokinesis","type":"exact"},{"name":"lipid tubulation involved in cytokinesis","type":"exact"}],"termid":"GO:0060991"}


id: PBO:0070822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a","termid":"PBO:0070822"}


id: PBO:0083287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in other Saccharomyces species; overlaps the verified gene GPD1; deletion confers sensitivity to GSAO; deletion in cyr1 mutant results in loss of stress resistance","termid":"PBO:0083287"}


id: GO:1901079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of relaxation of muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"positively_regulates","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of relaxation of muscle","synonyms":[{"name":"activation of relaxation of muscle","type":"narrow"},{"name":"up regulation of relaxation of muscle","type":"exact"},{"name":"up-regulation of relaxation of muscle","type":"exact"},{"name":"upregulation of relaxation of muscle","type":"exact"}],"termid":"GO:1901079"}


id: PR:Q9USJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsg1 gene.","definition_xrefs":["UniProtKB:Q9USJ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD kinase subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.08","synonyms":[{"name":"CTD kinase subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTDK-I gamma subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsg1","type":"exact"}],"termid":"PR:Q9USJ8"}


id: PBO:0083485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene VHS3/YOR054C","termid":"PBO:0083485"}


id: GO:0032045
data:
  {"annotated_genes":["SJAG_01367","SJAG_01659","SJAG_00688","SJAG_01032","SJAG_03928","SJAG_06588","SJAG_00143","SJAG_03089"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93879],"is_not":false,"summary":null,"term":"GO:0032045"},{"annotations":[87025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035658"},{"annotations":[101243,88921,103976,90096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071986"},{"annotations":[87215,103117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034066"}]},"cv_name":"cellular_component","definition":"A protein complex that stimulates the exchange of guanyl nucleotides associated with a GTPase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00688":null,"SJAG_01032":null,"SJAG_01367":null,"SJAG_01659":null,"SJAG_03089":null,"SJAG_03928":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"guanyl-nucleotide exchange factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"guanine nucleotide exchange factor","type":"related"}],"termid":"GO:0032045","terms_by_termid":{"GO:0032045":null,"GO:0034066":null,"GO:0035658":null,"GO:0071986":null}}


id: GO:0000819
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id: PR:O14225
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id: GO:0051028
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id: GO:0048335
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id: PBO:0048171
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id: GO:0034244
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id: GO:0140534
data:
  {"annotated_genes":["SJAG_03280","SJAG_03930","SJAG_05278","SJAG_03311","SJAG_02065","SJAG_00790","SJAG_02875","SJAG_02776","SJAG_03066","SJAG_01999","SJAG_01940","SJAG_04127","SJAG_01069","SJAG_02867","SJAG_03955","SJAG_01178","SJAG_03841","SJAG_03261","SJAG_02437","SJAG_00064","SJAG_01709","SJAG_01305","SJAG_02330","SJAG_02913","SJAG_01240","SJAG_03333","SJAG_05348","SJAG_03710","SJAG_01127","SJAG_01223","SJAG_01051","SJAG_02208","SJAG_03535","SJAG_05274","SJAG_00846","SJAG_06425","SJAG_04119","SJAG_03737","SJAG_01750","SJAG_03292","SJAG_04956","SJAG_04370","SJAG_04881","SJAG_01006","SJAG_02914","SJAG_04294","SJAG_01389","SJAG_02354","SJAG_03115","SJAG_06383","SJAG_00295","SJAG_01349","SJAG_00175","SJAG_04435","SJAG_04384","SJAG_03416","SJAG_04821","SJAG_01166","SJAG_04451","SJAG_01558","SJAG_03672","SJAG_00277","SJAG_05414","SJAG_00959","SJAG_02804","SJAG_03801","SJAG_01134","SJAG_02588","SJAG_03345","SJAG_01929","SJAG_04090","SJAG_00360","SJAG_00924"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107793,96098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070939"},{"annotations":[97274,109994,90869,99621,87687,110544,100896,108399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072546"},{"annotations":[88356,89117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034663"},{"annotations":[93098,106283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031211"},{"annotations":[103647,103775,112787,101959,86926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032865"},{"annotations":[107141,83979,110284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043529"},{"annotations":[83414,114688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017177"},{"annotations":[99147,112303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990529"},{"annotations":[85582,87246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120097"},{"annotations":[104712,89110,89021,106060,113410,107746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000506"},{"annotations":[110098,99823,83474,87418,88246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042765"},{"annotations":[85287,100082,100928,103801,101411,113330,105695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"},{"annotations":[85548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990604"},{"annotations":[91372,113490,98666,95725,97434,96108,113022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008250"},{"annotations":[104527,87266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160005"},{"annotations":[94120,104437,105466,102282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005784"},{"annotations":[91791,106541,86611,105760],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031207"},{"annotations":[108707,83682,94493,99930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005787"},{"annotations":[90318,105886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005785"},{"annotations":[94121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071261"},{"annotations":[99681,94758,94419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043541"},{"annotations":[85291,100085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034098"}]},"cv_name":"cellular_component","definition":"A protein complex that is part of an endoplasmic reticulum.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"endoplasmic 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reticulum protein-containing complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140534","terms_by_termid":{"GO:0000506":null,"GO:0000836":null,"GO:0005784":null,"GO:0005785":null,"GO:0005787":null,"GO:0008250":null,"GO:0017177":null,"GO:0031207":null,"GO:0031211":null,"GO:0032865":null,"GO:0034098":null,"GO:0034663":null,"GO:0042765":null,"GO:0043529":null,"GO:0043541":null,"GO:0070939":null,"GO:0071261":null,"GO:0072546":null,"GO:0120097":null,"GO:0160005":null,"GO:1990529":null,"GO:1990604":null}}


id: PATO:0002148
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A virulence that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"virulence","termid":"PATO:0002146"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased virulence","termid":"PATO:0002148"}


id: PBO:0091860
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure of SPNCRNA.113 used","termid":"PBO:0091860"}


id: PR:P50526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ssp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.03","synonyms":[{"name":"Spom972h-ssp1","type":"exact"}],"termid":"PR:P50526"}


id: GO:0016415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an octanoyl (CH3-[CH2]6-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete octanoyltransferase activity (obsolete GO:0016415)","termid":"GO:0016415"}


id: PBO:0092031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine (ucg), mitochondrial","termid":"PBO:0092031"}


id: GO:1990470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs).","definition_xrefs":["GOC:bhm","PMID:24906153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"piRNA cluster binding","termid":"GO:1990470"}


id: PBO:0047238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member J","termid":"PBO:0047238"}


id: GO:0072267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of the metanephric capsule is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule specification","termid":"GO:0072130"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"},{"relation_name":"part_of","term_name":"metanephric capsule formation","termid":"GO:0072266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric capsule specification","termid":"GO:0072267"}


id: PBO:0039985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6","termid":"PBO:0039985"}


id: PBO:0087533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Nup84p subcomplex of nuclear pore complex (NPC); contributes to nucleocytoplasmic transport, NPC biogenesis; is involved in establishment of a normal nucleocytoplasmic concentration gradient of GTPase Gsp1p; also plays roles in several processes that may require localization of genes or chromosomes at nuclear periphery, including double-strand break repair, transcription and chromatin silencing; relocalizes to cytosol in response to hypoxia; homolog of human NUP133","termid":"PBO:0087533"}


id: PBO:0075527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E7, pseudogene","termid":"PBO:0075527"}


id: PATO:0001122
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001122 absolute power value (obsolete PATO:0001122)","termid":"PATO:0001122"}


id: PBO:0045200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B11","termid":"PBO:0045200"}


id: GO:0102777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: anthocyanidin 3,5-di-O-beta-D-glucoside + caffeoyl-CoA = pelargonidin-3,5-diglucoside-5-O-caffeoylglucoside + coenzyme A(4-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete caffeoyl-CoA:pelargonidin-3,5-diglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity (obsolete GO:0102777)","termid":"GO:0102777"}


id: GO:0001796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type IIa hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type II hypersensitivity","termid":"GO:0002892"},{"relation_name":"regulates","term_name":"type IIa hypersensitivity","termid":"GO:0001794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type IIa hypersensitivity","termid":"GO:0001796"}


id: PR:O13881
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic loci regulator 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.17","synonyms":[{"name":"Spom972h-clr2","type":"exact"}],"termid":"PR:O13881"}


id: PBO:0087606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC); subunits of this complex are: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p; probable dephospho-CoA kinase (DPCK) that catalyzes the last step in coenzyme A biosynthesis; involved in histone acylation; null mutant lethality is complemented by human homolog DCAKD and by E. coli coaE (encoding DPCK); detected in purified mitochondria in high-throughput studies; also localized to lipid droplets","termid":"PBO:0087606"}


id: PBO:0058473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5581","termid":"PBO:0058473"}


id: GO:0043455
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary metabolism, the chemical reactions and pathways involving compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of secondary metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of secondary metabolism","type":"exact"}],"termid":"GO:0043455","terms_by_termid":{"GO:1905569":null}}


id: SO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone invalidated because it is chimeric.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_chimeric_cDNA","termid":"SO:0000362"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chimeric_cDNA_clone","synonyms":[{"name":"chimeric cDNA clone","type":"exact"}],"termid":"SO:0000810"}


id: GO:0140865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-22 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:34755534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-22-mediated signaling pathway","synonyms":[{"name":"IL-22-mediated signaling pathway","type":"exact"},{"name":"interleukin-22-mediated signalling pathway","type":"exact"}],"termid":"GO:0140865"}


id: PBO:0030572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_phenylalanine_level","termid":"PBO:0030572"}


id: FYPO:0001267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export does not occur when the cell is subject to a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished nuclear export","termid":"FYPO:0000507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear export during cellular hypotonic salinity response","synonyms":[{"name":"abolished nuclear export during cellular hypotonic salinity response during mitotic cell cycle","type":"related"},{"name":"absent nuclear export during cellular hypotonic salinity response","type":"exact"},{"name":"nuclear export during cellular hypotonic salinity response abolished","type":"exact"},{"name":"nuclear export during cellular hypotonic salinity response abolished during vegetative growth","type":"exact"},{"name":"nuclear export in response to salt starvation abolished","type":"exact"}],"termid":"FYPO:0001267"}


id: PBO:0074913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 83B","termid":"PBO:0074913"}


id: PBO:0044954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 1","termid":"PBO:0044954"}


id: PBO:0084354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase; reduces intracellular ROS, contributes to L-proline analog resistance and tolerance to ethanol and freezing; member of N-acetyltransferase superfamily; not found in S288C, present in strains with Sigma1278b background; located on left arm of Chr X ~ 15 kb from telomere; identical to MPR1 except for one base at position 254, leading to Gly at position 85 in MPR1 and Glu in MPR2; present also in Japanese industrial baker's yeast","termid":"PBO:0084354"}


id: FYPO:0002272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have abnormal morphology (i.e. size, shape, or structure). Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, abnormal cell morphology (obsolete FYPO:0002272)","synonyms":[{"name":"inviable microcolony, vegetative cells with abnormal morphology","type":"exact"}],"termid":"FYPO:0002272"}


id: GO:0006577
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99738,107684,107683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[107685,99739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any betaine, the N-trimethyl derivative of an amino acid.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino-acid betaine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"betaine metabolic process","type":"exact"},{"name":"betaine metabolism","type":"exact"}],"termid":"GO:0006577","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: GO:0003256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the differentiation of a myocardial precursor cell.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation (obsolete GO:0003256)","termid":"GO:0003256"}


id: GO:0047968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + glyoxylate + NADP+ = H+ + NADPH + oxalyl-CoA.","definition_xrefs":["RHEA:21024","EC:1.2.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glyoxylate dehydrogenase (acylating) activity","secondary_identifiers":["MetaCyc:GLYOXYLATE-DEHYDROGENASE-ACYLATING-RXN","KEGG_REACTION:R00468"],"synonyms":[{"name":"glyoxylate:NADP+ oxidoreductase (CoA-oxalylating)","type":"related"}],"termid":"GO:0047968"}


id: GO:0005783
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id: PBO:0063250
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id: GO:1905428
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id: GO:0032298
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id: GO:0031207
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id: PBO:0048863
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id: GO:0061802
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id: FYPO:0004036
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id: GO:1903617
data:
  {"annotated_genes":["SJAG_00845","SJAG_02838","SJAG_02392","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86800,91908,99817,106904,115627],"is_not":false,"summary":null,"term":"GO:1903617"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cytokinesis, division site positioning.","definition_xrefs":["PMID:21246752","PMID:9852154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis, division site positioning","termid":"GO:1902472"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"positive regulation of cytokinesis, site selection","termid":"GO:2000076"},{"relation_name":"positively_regulates","term_name":"mitotic cytokinesis, division site positioning","termid":"GO:1902408"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"positive regulation of mitotic cytokinesis, site selection","type":"exact"}],"termid":"GO:1903617","terms_by_termid":{"GO:1903617":null}}


id: GO:0042751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism enters and maintains a period of dormancy, similar to hibernation, but that occurs during the summer. It insulates against heat to prevent the harmful effects of the season.","definition_xrefs":["Wikipedia:Estivation","GOC:jl","PMID:12443930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"estivation","synonyms":[{"name":"aestivation","type":"exact"}],"termid":"GO:0042751"}


id: PBO:0060100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 1","termid":"PBO:0060100"}


id: GO:0033898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the endonucleolytic cleavage to 2',3'-cyclic nucleotides.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete Bacillus subtilis ribonuclease activity (obsolete GO:0033898)","synonyms":[{"name":"proteus mirabilis RNase activity","type":"exact"},{"name":"ribonucleate nucleotido-2'-transferase (cyclizing) activity","type":"broad"}],"termid":"GO:0033898"}


id: PBO:0058212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4504","termid":"PBO:0058212"}


id: GO:1900445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:1900443"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"}],"termid":"GO:1900445"}


id: GO:0010159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which information that determines the correct position at which animal organ primordia are formed is generated and perceived resulting in correct positioning of the new animal organ.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ position","termid":"GO:0010159"}


id: GO:0046584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving enniatins, any of various cyclodepsipeptide antibiotics from Fusarium species that function as ionophores.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"depsipeptide metabolic process","termid":"GO:0050761"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"enniatin metabolic process","synonyms":[{"name":"enniatin metabolism","type":"exact"}],"termid":"GO:0046584"}


id: PBO:0075358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sosondowah ankyrin repeat domain family member D","termid":"PBO:0075358"}


id: GO:0071075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the eukaryotic translation initiation factor 2 complex (EIF2), CUG binding protein 1, and several endoplasmic reticulum proteins; the complex is involved in the regulation of translation.","definition_xrefs":["PMID:16931514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"CUGBP1-eIF2 complex","termid":"GO:0071075"}


id: PBO:0077331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 68","termid":"PBO:0077331"}


id: PBO:0031481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pigment_accumulation","termid":"PBO:0031481"}


id: PBO:0036102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_island_during_vegetative_growth","termid":"PBO:0036102"}


id: PBO:0054939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2353","termid":"PBO:0054939"}


id: GO:0141116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont prevents host complement activation by sequestering it away from its surface.","definition_xrefs":["PMID:18323455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by complement sequestering","synonyms":[{"name":"suppression of complement activation by another organism by complement sequestering","type":"broad"}],"termid":"GO:0141116"}


id: PBO:0053272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A5","termid":"PBO:0053272"}


id: FYPO:0003671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ATP binding","termid":"FYPO:0003671"}


id: GO:2001298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N(omega),N(omega)-dimethyl-L-arginine, a methyl-L-arginine having two methyl groups both attached to the primary amino moiety of the guanidino group.","definition_xrefs":["GOC:rs","PMID:10510241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"N(omega),N(omega)-dimethyl-L-arginine metabolic process","synonyms":[{"name":"N(omega),N(omega)-dimethyl-L-arginine metabolism","type":"exact"}],"termid":"GO:2001298"}


id: PBO:0082247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0082247"}


id: PBO:0051978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jade family PHD finger 1","termid":"PBO:0051978"}


id: GO:0034153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 6 signaling pathway","termid":"GO:0034151"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"positive regulation of TLR6 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034153"}


id: PBO:0054490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1890","termid":"PBO:0054490"}


id: PBO:0057401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548h-3","termid":"PBO:0057401"}


id: GO:0106360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-3-methylhexadecanoyl-CoA = 2-methylpentadecanal + formyl-CoA.","definition_xrefs":["RHEA:25379"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-3-methylhexadecanoyl-CoA lyase activity (obsolete GO:0106360)","termid":"GO:0106360"}


id: SO:0002339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes for a scaRNA (small Cajal body-specific RNA).","definition_xrefs":["PMID:28869095","PMID:27775477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_gene","termid":"SO:0001267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaRNA_gene","synonyms":[{"name":"Small Cajal body-specific RNA gene","type":"exact"},{"name":"scaRNA gene","type":"exact"}],"termid":"SO:0002339"}


id: PBO:0005524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp5","termid":"PBO:0005524"}


id: GO:0005753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A proton-transporting ATP synthase complex found in the mitochondrial membrane.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase complex (obsolete GO:0005753)","synonyms":[{"name":"mitochondrial respiratory chain complex V","type":"exact"}],"termid":"GO:0005753"}


id: PBO:0084283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for efficient mating; may participate in or regulate the low affinity Ca2+ influx system, which affects intracellular signaling and cell-cell fusion during mating","termid":"PBO:0084283"}


id: PR:P87318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC31F10.17c gene.","definition_xrefs":["UniProtKB:P87318","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C31F10.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.17c","synonyms":[{"name":"Spom972h-SPBC31F10.17c","type":"exact"}],"termid":"PR:P87318"}


id: GO:0098866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of the membrane of a multivesicular body with the apical plasma membrane, resulting in release of exosomes from the cell.","definition_xrefs":["PMID:26459596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion to plasma membrane","termid":"GO:0099500"},{"relation_name":"part_of","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0016192","GO:0044085","GO:0006810"],"is_obsolete":false,"name":"multivesicular body fusion to apical plasma membrane","termid":"GO:0098866"}


id: PBO:0073319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 2","termid":"PBO:0073319"}


id: GO:0030408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-formimidoyltetrahydrofolate + glycine = (6S)-5,6,7,8-tetrahydrofolate + N-formimidoylglycine.","definition_xrefs":["RHEA:24288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glycine formimidoyltransferase activity","secondary_identifiers":["MetaCyc:GLYCINE-FORMIMINOTRANSFERASE-RXN","EC:2.1.2.4","KEGG_REACTION:R02729"],"synonyms":[{"name":"5-formimidoyltetrahydrofolate:glycine N-formimidoyltransferase activity","type":"related"},{"name":"FIG formiminotransferase activity","type":"related"},{"name":"formimidoyltransferase activity","type":"broad"},{"name":"formiminoglycine formiminotransferase activity","type":"related"},{"name":"formiminotransferase activity","type":"broad"},{"name":"glycine formiminotransferase activity","type":"exact"}],"termid":"GO:0030408"}


id: PATO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's one edge of its surface being wholly rolled up in another.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convolute","termid":"PATO:0001966"}


id: PBO:0064960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 12","termid":"PBO:0064960"}


id: GO:0002683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune system process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immune system process","synonyms":[{"name":"down regulation of immune system process","type":"exact"},{"name":"down-regulation of immune system process","type":"exact"},{"name":"downregulation of immune system process","type":"exact"},{"name":"inhibition of immune system process","type":"narrow"}],"termid":"GO:0002683"}


id: MOD:00819
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-2-aminobutanoic acid.","definition_xrefs":["DeltaMass:0","ChEBI:35619","PubMed:11740505","RESID:AA0409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-aminobutanoic acid (Glu)","synonyms":[{"name":"(S)-2-aminobutanoic acid","type":"exact"},{"name":"Abu","type":"exact"},{"name":"L-2-amino-n-butyric acid","type":"exact"},{"name":"L-2-aminobutanoic acid","type":"exact"},{"name":"L-2-aminobutyric acid","type":"exact"},{"name":"L-alpha-amino-n-butyric acid","type":"exact"},{"name":"L-alpha-aminobutyric acid","type":"exact"},{"name":"L-butyrine","type":"exact"},{"name":"alpha-amino-n-butyric acid","type":"exact"},{"name":"alpha-aminobutyric acid","type":"exact"},{"name":"butyrine","type":"exact"},{"name":"dCbxGlu","type":"exact"}],"termid":"MOD:00819"}


id: GO:1901265
data:
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id: GO:0048689
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a growth cone in an injured axon.","definition_xrefs":["GOC:dph","GOC:lm","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of growth cone in injured axon","termid":"GO:0048689"}


id: PBO:0069184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 438, pseudogene","termid":"PBO:0069184"}


id: PBO:0071917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 2","termid":"PBO:0071917"}


id: PBO:0060090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 37","termid":"PBO:0060090"}


id: PBO:0061672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 58","termid":"PBO:0061672"}


id: PBO:0078144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 23/delta variable 6","termid":"PBO:0078144"}


id: PBO:0062853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otogelin","termid":"PBO:0062853"}


id: GO:0043203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of the neuronal cell soma from which the axon originates.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon hillock","secondary_identifiers":["NIF_Subcellular:sao627227260","Wikipedia:Axon_hillock"],"termid":"GO:0043203"}


id: PBO:0065559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 like","termid":"PBO:0065559"}


id: FYPO:0002400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during mitotic interphase in which all detectable microtubules are present in a single bundle.","definition_xrefs":["PomBase:al","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"single microtubule bundle during mitotic interphase","synonyms":[{"name":"single MT bundle during mitotic interphase","type":"exact"},{"name":"single microtubule array during mitotic interphase","type":"exact"}],"termid":"FYPO:0002400"}


id: PBO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Pap1/Caf3","termid":"PBO:0001410"}


id: PBO:0072691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX family transcription factor 2","termid":"PBO:0072691"}


id: GO:0008811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chloramphenicol + acetyl-CoA = chloramphenicol 3-acetate + CoA.","definition_xrefs":["RHEA:18421","EC:2.3.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"chloramphenicol O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03065","MetaCyc:CHLORAMPHENICOL-O-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"CAT I","type":"related"},{"name":"CAT II","type":"related"},{"name":"CAT III","type":"related"},{"name":"acetyl-CoA:chloramphenicol 3-O-acetyltransferase activity","type":"related"},{"name":"chloramphenicol acetylase activity","type":"related"},{"name":"chloramphenicol acetyltransferase activity","type":"related"},{"name":"chloramphenicol transacetylase activity","type":"related"}],"termid":"GO:0008811"}


id: GO:0052516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the jasmonic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont jasmonic acid-mediated defense response (obsolete GO:0052516)","synonyms":[{"name":"induction by organism of symbiont JA-mediated defense response","type":"narrow"},{"name":"induction by organism of symbiont jasmonic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of symbiont JA-mediated defense response","type":"exact"},{"name":"positive regulation by organism of symbiont jasmonic acid-mediated defense response","type":"exact"}],"termid":"GO:0052516"}


id: GO:0102921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + D-glycerate = H+ + 2-(alpha-D-mannosyl)-D-glycerate + GDP.","definition_xrefs":["GOC:pz","EC:2.4.1.269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"mannosylglycerate synthase activity","secondary_identifiers":["MetaCyc:RXN-8849","RHEA:30639"],"termid":"GO:0102921"}


id: GO:0045939
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving steroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"negatively_regulates","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of steroid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of steroid metabolic process","type":"exact"},{"name":"down-regulation of steroid metabolic process","type":"exact"},{"name":"downregulation of steroid metabolic process","type":"exact"},{"name":"inhibition of steroid metabolic process","type":"narrow"},{"name":"negative regulation of steroid metabolism","type":"exact"}],"termid":"GO:0045939","terms_by_termid":{"GO:0010895":null}}


id: PBO:0113049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class II abasic (AP) endonuclease involved in repair of DNA damage; also possesses 3'-diesterase and PCNA-stiimulated 3' to 5' exonuclease activities; resolves blocked 3' ends that result from removal of misincorporated nucleotides; frays and cleaves 3' DNA termini facilitating 3' DNA-end healing via endonucleolytic cleavage;  homolog of human APEX2 and E. coli exoIII","termid":"PBO:0113049"}


id: PBO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-associated factor","termid":"PBO:0005004"}


id: GO:0052470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the symbiont signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont signal transduction pathway (obsolete GO:0052470)","termid":"GO:0052470"}


id: PBO:0076210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 20","termid":"PBO:0076210"}


id: GO:0016731
data:
  {"annotated_genes":["SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008860"},{"annotations":[105820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004324"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an iron-sulfur protein acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors","termid":"GO:0016730"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.18.1.-"],"termid":"GO:0016731","terms_by_termid":{"GO:0004324":null,"GO:0008860":null}}


id: GO:0001316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring during the process of replicative cell aging as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to reactive oxygen species involved in replicative cell aging (obsolete GO:0001316)","synonyms":[{"name":"age-dependent response to AOS during replicative cell aging","type":"exact"},{"name":"age-dependent response to ROI during replicative cell aging","type":"related"},{"name":"age-dependent response to ROS during replicative cell aging","type":"related"},{"name":"age-dependent response to active oxygen species during replicative cell aging","type":"related"},{"name":"age-dependent response to reactive oxidative species during replicative cell aging","type":"exact"},{"name":"age-dependent response to reactive oxygen intermediate during replicative cell aging","type":"related"},{"name":"age-dependent response to reactive oxygen species during replicative cell ageing","type":"exact"},{"name":"age-dependent response to reactive oxygen species during replicative cell aging","type":"related"}],"termid":"GO:0001316"}


id: SO:1000107
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000107 mutation_causing_out_of_frame_polypeptide_N_terminal_elongation (obsolete SO:1000107)","synonyms":[{"name":"mutation causing out of frame polypeptide N terminal elongation","type":"exact"},{"name":"out of frame polypeptide N-terminal elongation","type":"exact"}],"termid":"SO:1000107"}


id: PBO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease MRP complex subunit (predicted)","termid":"PBO:0002288"}


id: PBO:0068454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 30, pseudogene","termid":"PBO:0068454"}


id: GO:0110164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic anaphase B (spindle phase three).","definition_xrefs":["GOC:vw","PMID:27697865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic spindle organization","termid":"GO:0110028"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation (spindle phase three)","termid":"GO:0110162"},{"relation_name":"is_a","term_name":"positive regulation of mitotic spindle elongation","termid":"GO:1902846"},{"relation_name":"positively_regulates","term_name":"mitotic spindle elongation (spindle phase three)","termid":"GO:0061805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150","GO:0000226","GO:0000070"],"is_obsolete":false,"name":"positive regulation of mitotic spindle elongation (spindle phase three)","termid":"GO:0110164"}


id: GO:0016624
data:
  {"annotated_genes":["SJAG_02464","SJAG_02006","SJAG_03064"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004591"},{"annotations":[104723,91050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004739"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02006":null,"SJAG_02464":null,"SJAG_03064":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.2.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulphide as acceptor","type":"exact"}],"termid":"GO:0016624","terms_by_termid":{"GO:0004591":null,"GO:0004739":null}}


id: GO:0016796
data:
  {"annotated_genes":["SJAG_04587","SJAG_04824","SJAG_03745","SJAG_00401","SJAG_04006","SJAG_03734","SJAG_03132","SJAG_01163","SJAG_04818","SJAG_06586","SJAG_03276","SJAG_00081","SJAG_01173","SJAG_01832","SJAG_00966","SJAG_02908","SJAG_04519","SJAG_03876","SJAG_05280","SJAG_01836","SJAG_04153","SJAG_04407","SJAG_02993","SJAG_04084","SJAG_02275","SJAG_00377","SJAG_00841","SJAG_01648","SJAG_04410","SJAG_04369","SJAG_01822","SJAG_02298","SJAG_05373","SJAG_02540","SJAG_02818","SJAG_01798"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105246,101345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[99048,111491,95020,104621,112780,107395,88277,101382,103592,100524,98176,99787,91680,111823,103913,86011,114481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[89027,93194,84430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[86344,86654,91005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[111848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[106090,84586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[103889,93197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[110586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[109074,89444,111828,103914,112781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[89768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"},{"annotations":[103483,84589,97229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[107735,93199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00377":null,"SJAG_00401":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01163":null,"SJAG_01173":null,"SJAG_01648":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01832":null,"SJAG_01836":null,"SJAG_02275":null,"SJAG_02298":null,"SJAG_02540":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03276":null,"SJAG_03734":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04410":null,"SJAG_04519":null,"SJAG_04587":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05280":null,"SJAG_05373":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824","GO:0004527"],"is_obsolete":false,"name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.15.-"],"synonyms":[{"name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5' phosphomonoesters","type":"exact"}],"termid":"GO:0016796","terms_by_termid":{"GO:0000175":null,"GO:0004534":null,"GO:0004535":null,"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0008859":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null,"GO:1990838":null}}


id: GO:1901978
data:
  {"annotated_genes":["SJAG_01837","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[112853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell cycle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","PMID:23028116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell cycle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001052"],"synonyms":[{"name":"activation of cell cycle checkpoint","type":"narrow"},{"name":"positive regulation of G1/S checkpoint","type":"related"},{"name":"positive regulation of G1/S transition checkpoint","type":"related"},{"name":"up regulation of cell cycle checkpoint","type":"exact"},{"name":"up-regulation of cell cycle checkpoint","type":"exact"},{"name":"upregulation of cell cycle checkpoint","type":"exact"}],"termid":"GO:1901978","terms_by_termid":{"GO:0090267":null,"GO:1905326":null}}


id: GO:1904367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokinesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8679543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of chemokinesis","termid":"GO:1904365"},{"relation_name":"positively_regulates","term_name":"chemokinesis","termid":"GO:0042466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokinesis","synonyms":[{"name":"activation of chemokinesis","type":"narrow"},{"name":"up regulation of chemokinesis","type":"exact"},{"name":"up-regulation of chemokinesis","type":"exact"},{"name":"upregulation of chemokinesis","type":"exact"}],"termid":"GO:1904367"}


id: GO:0001304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that results in changes in chromatin structure contributing to replicative cell aging.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete progressive alteration of chromatin involved in replicative cell aging (obsolete GO:0001304)","synonyms":[{"name":"progressive alteration of chromatin during replicative cell ageing","type":"exact"},{"name":"progressive alteration of chromatin during replicative cell aging","type":"related"}],"termid":"GO:0001304"}


id: PBO:0050708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 6","termid":"PBO:0050708"}


id: PR:P54069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha/beta hydrolase domain-containing protein 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bem46 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.03","secondary_identifiers":["UniProtKB:P54069"],"synonyms":[{"name":"Spom972h-ABHD13","type":"exact"}],"termid":"PR:P54069"}


id: SO:0001205
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which the SP6 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP6_RNA_Polymerase_Promoter","synonyms":[{"name":"SP6 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001205"}


id: PBO:0027476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_monensin","termid":"PBO:0027476"}


id: PBO:0044818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109A (pseudogene)","termid":"PBO:0044818"}


id: PBO:0080002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 11","termid":"PBO:0080002"}


id: GO:0010027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the thylakoid membrane.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"thylakoid membrane organization","synonyms":[{"name":"thylakoid membrane organisation","type":"exact"},{"name":"thylakoid membrane organization and biogenesis","type":"related"}],"termid":"GO:0010027"}


id: SO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat that is located at dispersed sites in the genome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispersed_repeat","secondary_identifiers":["http://en.wikipedia.org/wiki/Interspersed_repeat"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:dispersed","type":"exact"},{"name":"dispersed repeat","type":"exact"},{"name":"interspersed repeat","type":"exact"}],"termid":"SO:0000658"}


id: PBO:0085891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in regulation of dNTP production; null mutant suppresses the lethality of lcd1 and rad53 mutations; expression is induced by Kar4p","termid":"PBO:0085891"}


id: PBO:0046405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPC1 antisense RNA 1","termid":"PBO:0046405"}


id: PBO:0088902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi UDP-galactose transmembrane transporter Gms2","termid":"PBO:0088902"}


id: PBO:0044011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1 like","termid":"PBO:0044011"}


id: PATO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A chromatic scalar-circular quality inhering in an object that manifests in an observer by virtue of the dominant wavelength of the visible light; may be subject to fiat divisions, typically into 7 or 8 spectra.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatic property","termid":"PATO:0001301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"color hue","termid":"PATO:0000015"}


id: PBO:0073614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SID1 transmembrane family member 1","termid":"PBO:0073614"}


id: PBO:0064753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 89","termid":"PBO:0064753"}


id: PBO:0082631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of cytosolic iron-sulfur protein assembly (CIA) machinery; acts at a late step of Fe-S cluster assembly; forms the CIA targeting complex with Cia1p and Met18p that directs Fe-S cluster incorporation and maturation of a subset of proteins involved in methionine biosynthesis, DNA replication and repair, transcription, and telomere maintenance; ortholog of human FAM96B","termid":"PBO:0082631"}


id: GO:0099558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that preserves the structural organistation and orientation of a synaptic cellular component such as the synaptic cytoskeleton and molecular scaffolds.","definition_xrefs":["PMID:25611509","GOC:dos","PMID:24449494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction maintenance","termid":"GO:0034331"},{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of synapse structure","synonyms":[{"name":"synaptic maintenance","type":"exact"}],"termid":"GO:0099558"}


id: GO:1904146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22674394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903538"},{"relation_name":"positively_regulates","term_name":"meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of meiotic cell cycle process involved in oocyte maturation","synonyms":[{"name":"activation of meiotic cell cycle process involved in oocyte maturation","type":"narrow"},{"name":"up regulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"up-regulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"upregulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"}],"termid":"GO:1904146"}


id: PATO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viviparous organism that has given birth five or more times.","definition_xrefs":["wiki:http://en.wikipedia.org/wiki/Parity_(biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiparous","termid":"PATO:0002369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grand multi[arous","termid":"PATO:0002372"}


id: PBO:0005496
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts detected","termid":"PBO:0005496"}


id: PBO:0009256
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ARPC3","termid":"PBO:0009256"}


id: PBO:0030007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_middle_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0030007"}


id: GO:0022824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific neurotransmitter has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005230"},{"relation_name":"is_a","term_name":"transmitter-gated channel activity","termid":"GO:0022835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215","GO:0038023"],"is_obsolete":false,"name":"transmitter-gated monoatomic ion channel activity","synonyms":[{"name":"ionotropic neurotransmitter receptor activity","type":"narrow"},{"name":"transmitter-gated ion channel activity","type":"broad"}],"termid":"GO:0022824"}


id: PBO:0070436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabphilin 3A","termid":"PBO:0070436"}


id: FYPO:0007312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 5 of histone H4 at the central core of the centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation at centromere central core during vegetative growth","termid":"FYPO:0003415"},{"relation_name":"is_a","term_name":"increased histone H4-K5 acetylation during vegetative growth","termid":"FYPO:0005309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H4-K5 acetylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H4-K5 acetylation at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K5 acetylation at centromeric central core during vegetative growth","type":"exact"},{"name":"increased histone H4K5 acetylation at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0007312"}


id: GO:0046462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monoacylglycerol, any ester of glycerol in which any one of its hydroxyl groups has been acylated with a fatty acid, the other being non-esterified.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoacylglycerol metabolic process","synonyms":[{"name":"monoacylglycerol metabolism","type":"exact"},{"name":"monoglyceride metabolic process","type":"exact"},{"name":"monoglyceride metabolism","type":"exact"}],"termid":"GO:0046462"}


id: PBO:0062392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 13 pseudogene","termid":"PBO:0062392"}


id: GO:0051250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"negatively_regulates","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte activation","synonyms":[{"name":"down regulation of lymphocyte activation","type":"exact"},{"name":"down-regulation of lymphocyte activation","type":"exact"},{"name":"downregulation of lymphocyte activation","type":"exact"},{"name":"inhibition of lymphocyte activation","type":"narrow"}],"termid":"GO:0051250"}


id: PBO:0079068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-2","termid":"PBO:0079068"}


id: GO:0141077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupts an interferon-mediated signaling in the host organism.","definition_xrefs":["PMID:31266861","PMID:34305858"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression of host interferon-mediated signaling pathway (obsolete GO:0141077)","synonyms":[{"name":"inhibition of host interferon signaling pathway","type":"related"},{"name":"negative regulation of host interferon-mediated signaling pathway","type":"exact"},{"name":"suppression of host IFN-mediated signaling pathway","type":"exact"},{"name":"suppression of host interferon-mediated signaling pathway","type":"narrow"},{"name":"symbiont-mediated of host interferon-mediated signaling pathway","type":"related"}],"termid":"GO:0141077"}


id: GO:0060860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of floral organ abscission, the controlled shedding of floral organs.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of floral organ abscission","termid":"GO:0060860"}


id: FYPO:0003391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ubiquinone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ubiquinone binding","synonyms":[{"name":"abnormal coenzyme Q binding","type":"exact"}],"termid":"FYPO:0003391"}


id: PBO:0041827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0041827"}


id: SO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature variant, where the alteration occurs downstream of the transcript termination site.","direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_transcript_variant","synonyms":[{"name":"downstream transcript variant","type":"exact"}],"termid":"SO:0001987"}


id: FYPO:0007440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the directed movement of sterols within cells is abnormal.","definition_xrefs":["GO:0032366","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal intracellular sterol transport","synonyms":[{"name":"abnormal intracellular sterol transport during mitotic cell cycle","type":"related"},{"name":"abnormal intracellular sterol transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007440"}


id: PBO:0065402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 5","termid":"PBO:0065402"}


id: PBO:0046827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5","termid":"PBO:0046827"}


id: PBO:0081101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZEB1 antisense RNA 1","termid":"PBO:0081101"}


id: GO:0072494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A late endosome in which regions of the limiting host cell endosomal membrane invaginate to form internal vesicles; host membrane proteins that enter the internal vesicles are sequestered from the host cytoplasm.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell late endosome","termid":"GO:0044184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host multivesicular body","synonyms":[{"name":"host cell multivesicular body","type":"exact"}],"termid":"GO:0072494"}


id: GO:0010834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and shortening the telomeric DNA.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere maintenance via telomere shortening (obsolete GO:0010834)","synonyms":[{"name":"telomere maintenance via telomere shortening","type":"exact"}],"termid":"GO:0010834"}


id: GO:0010754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cGMP-mediated signaling.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cGMP-mediated signaling","termid":"GO:0010752"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cGMP-mediated signaling","termid":"GO:0019934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cGMP-mediated signaling","synonyms":[{"name":"negative regulation of cGMP-mediated signalling","type":"exact"}],"termid":"GO:0010754"}


id: FYPO:0004388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more pyrimidine salvage RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Pyrimidine salvage RNAs are transcribed from genes whose products are involved in pyrimidine salvage.","definition_xrefs":["PMID:23695302","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased level of pyrimidine salvage gene mRNA during vegetative growth","synonyms":[{"name":"increased level of pyrimidine salvage gene RNA during vegetative growth","type":"exact"},{"name":"increased level of pyrimidine salvage gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of pyrimidine salvage gene transcripts during vegetative growth","type":"exact"},{"name":"increased pyrimidine salvage gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0004388"}


id: GO:1902035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:23403623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell proliferation","termid":"GO:1902033"},{"relation_name":"is_a","term_name":"positive regulation of stem cell proliferation","termid":"GO:2000648"},{"relation_name":"positively_regulates","term_name":"hematopoietic stem cell proliferation","termid":"GO:0071425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hematopoietic stem cell proliferation","synonyms":[{"name":"activation of hematopoietic stem cell proliferation","type":"narrow"},{"name":"activation of hemopoietic stem cell proliferation","type":"narrow"},{"name":"positive regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"up regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"up regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"up-regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"up-regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"upregulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"upregulation of hemopoietic stem cell proliferation","type":"exact"}],"termid":"GO:1902035"}


id: GO:0098700
data:
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id: PBO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase inhibitor associated with endocytosis (predicted)","termid":"PBO:0001317"}


id: PBO:0056131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme","termid":"PBO:0056131"}


id: GO:0050214
data:
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id: PBO:0003723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphate aldolase Fba1","termid":"PBO:0003723"}


id: PBO:0081482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 362","termid":"PBO:0081482"}


id: GO:0017004
data:
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id: GO:0005936
data:
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id: PR:000050538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe) that has been phosphorylated on a residue equivalent to Ser-527 of the amino acid sequence represented by UniProtKB:Q9P7J8. Example: UniProtKB:Q9P7J8, Ser-527, MOD:00046.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:12805221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe)","termid":"PR:000036914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gad8/Phos(S527)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein kinase gad8 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gad8/Phos:2","type":"exact"},{"name":"UniProtKB:Q9P7J8, Ser-527, MOD:00046","type":"narrow"},{"name":"gad8/Phos(S527)","type":"exact"}],"termid":"PR:000050538"}


id: GO:0048877
data:
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id: GO:0051276
data:
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id: PBO:0029076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_sumoylated_protein_in_cell","termid":"PBO:0029076"}


id: PR:O60160
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh1 gene.","definition_xrefs":["UniProtKB:O60160","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase omh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.12c","synonyms":[{"name":"Spom972h-omh1","type":"exact"}],"termid":"PR:O60160"}


id: GO:0000810
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  {"annotated_genes":["SJAG_02356"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106530],"is_not":false,"summary":null,"term":"GO:0000810"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycerol 3-diphosphate + H2O = a 1,2-diacyl-sn-glycerol 3-phosphate + phosphate.","definition_xrefs":["GOC:kad","PMID:8567632","RHEA:27449","PMID:9452443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"diacylglycerol diphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-11277","EC:3.6.1.75"],"synonyms":[{"name":"DGPP phosphatase activity","type":"exact"},{"name":"DGPP phosphohydrolase activity","type":"exact"},{"name":"diacylglycerol pyrophosphate phosphatase activity","type":"exact"}],"termid":"GO:0000810","terms_by_termid":{"GO:0000810":null}}


id: GO:0030906
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  {"annotated_genes":["SJAG_01039"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114580],"is_not":false,"summary":null,"term":"GO:0030906"}]},"cv_name":"cellular_component","definition":"The trimeric subcomplex of the retromer, believed to be closely associated with the membrane. This trimeric complex is responsible for recognizing and binding to cargo molecules. The complex comprises three Vps proteins in both yeast and mammalian cells: Vps35p, Vps29p, and Vps26p in yeast, and VPS35, VPS29 and VPS26A or VPS26B in mammals.","definition_xrefs":["PMID:11102511","PMID:26220253","PMID:9700157","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"retromer complex","termid":"GO:0030904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"retromer, cargo-selective complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cargo-selective retromer subcomplex","type":"exact"},{"name":"retromer CSC","type":"exact"},{"name":"retromer complex, inner shell","type":"exact"},{"name":"retromer, CRC","type":"exact"},{"name":"retromer, cargo recognition complex","type":"exact"}],"termid":"GO:0030906","terms_by_termid":{"GO:0030906":null}}


id: PBO:0075489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily E member 2, pseudogene","termid":"PBO:0075489"}


id: GO:1900472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylcholine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","PMID:8614637","PMID:8056324","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900472)","synonyms":[{"name":"positive regulation of phosphatidylcholine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900472"}


id: GO:0050812
data:
  {"annotated_genes":["SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01402":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0055086","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of acyl-CoA anabolism","type":"exact"},{"name":"regulation of acyl-CoA biosynthesis","type":"exact"},{"name":"regulation of acyl-CoA formation","type":"exact"},{"name":"regulation of acyl-CoA synthesis","type":"exact"}],"termid":"GO:0050812","terms_by_termid":{"GO:0010510":null}}


id: PBO:0034199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intracellular_endoparasite_of","termid":"PBO:0034199"}


id: PBO:0041152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 7","termid":"PBO:0041152"}


id: GO:0072045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the renal epithelium narrows along one axis and lengthens in a perpendicular axis that contributes to the shaping of a nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in nephron morphogenesis","termid":"GO:0072045"}


id: GO:0052332
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a cellular membrane of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of membrane in other organism involved in symbiotic interaction (obsolete GO:0052332)","synonyms":[{"name":"modification by organism of cell membrane in other organism during symbiotic interaction","type":"related"},{"name":"modification by organism of cell membrane in other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0052332"}


id: GO:0097006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of internal levels of plasma lipoprotein particles within an organism.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasma lipoprotein particle levels","synonyms":[{"name":"plasma lipoprotein particle homeostasis","type":"narrow"}],"termid":"GO:0097006"}


id: PR:Q9UU99
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC23B6.04c gene.","definition_xrefs":["UniProtKB:Q9UU99","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C23B6.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.04c","synonyms":[{"name":"Spom972h-SPCC23B6.04c","type":"exact"}],"termid":"PR:Q9UU99"}


id: PBO:0051008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily DCC subclass member 3","termid":"PBO:0051008"}


id: PBO:0069573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 845, pseudogene","termid":"PBO:0069573"}


id: PATO:0001029
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of ratio of the bearer's output to the bearer's input.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"efficiency","termid":"PATO:0001029"}


id: GO:0002770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of a T cell capable of inhibiting an immune effector process contributing to an immune response.","definition_xrefs":["PMID:15258309","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"T cell inhibitory signaling pathway","synonyms":[{"name":"T cell inhibitory signalling pathway","type":"exact"},{"name":"T lymphocyte inhibitory signaling pathway","type":"exact"},{"name":"T-cell inhibitory signaling pathway","type":"exact"},{"name":"T-lymphocyte inhibitory signaling pathway","type":"exact"}],"termid":"GO:0002770"}


id: PR:Q9Y821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmc4 gene.","definition_xrefs":["UniProtKB:Q9Y821","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.06","synonyms":[{"name":"RNA polymerase II mediator complex protein pmc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pmc4","type":"exact"},{"name":"mediator complex subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y821"}


id: PBO:0079864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase pseudogene 1","termid":"PBO:0079864"}


id: FYPO:0000806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which Golgi organization is abnormal. Golgi organization results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus.","definition_xrefs":["PomBase:mah","GO:0007030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal Golgi organization","synonyms":[{"name":"abnormal Golgi organisation","type":"exact"},{"name":"abnormal Golgi organization during mitotic cell cycle","type":"related"},{"name":"abnormal Golgi organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000806"}


id: PBO:0055909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 34","termid":"PBO:0055909"}


id: PBO:0031072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_conjugation_frequency","termid":"PBO:0031072"}


id: PBO:0068141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 448","termid":"PBO:0068141"}


id: PBO:0061507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexin 2","termid":"PBO:0061507"}


id: PBO:0061711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 6","termid":"PBO:0061711"}


id: GO:0007362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Specification of the terminal regions (the two non-segmented ends) of the embryo by the gap genes; exemplified in insects by the actions of huckebein and tailless gene products.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"part_of","term_name":"zygotic determination of anterior/posterior axis, embryo","termid":"GO:0007354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal region determination","termid":"GO:0007362"}


id: GO:0000935
data:
  {"annotated_genes":["SJAG_01754","SJAG_01888","SJAG_01456","SJAG_00610","SJAG_01453","SJAG_02916","SJAG_02022","SJAG_03704","SJAG_01171","SJAG_01799","SJAG_03655","SJAG_03705","SJAG_02215","SJAG_04776","SJAG_03625","SJAG_01718","SJAG_05285","SJAG_03748","SJAG_03453","SJAG_01196","SJAG_03753","SJAG_04322","SJAG_04771","SJAG_03436","SJAG_01787","SJAG_01855","SJAG_00667","SJAG_00652","SJAG_01181","SJAG_00514","SJAG_00442","SJAG_04666","SJAG_03581","SJAG_04901","SJAG_02222","SJAG_02166","SJAG_02169","SJAG_00669","SJAG_05001","SJAG_03379","SJAG_01774","SJAG_02379","SJAG_04668","SJAG_04690"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83552,83571,84311,84499,85082,85761,85889,86745,86774,86795,86867,88284,88417,88434,89596,89772,90616,91713,92927,93265,95820,96224,96264,97013,98025,98026,98737,98944,99596,100774,102211,102234,102387,103348,106240,107116,107504,109233,110194,110529,111976,112732,114068,114081],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[96226,111982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000936"}]},"cv_name":"cellular_component","definition":"A cell septum which forms as part of the division site and functions in the compartmentalization of a cell into two daughter cells at division. A division septum spans a cell and does not allow exchange of organelles or cytoplasm between compartments.","definition_xrefs":["GOC:clt","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell septum","termid":"GO:0030428"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00514":null,"SJAG_00610":null,"SJAG_00652":null,"SJAG_00667":null,"SJAG_00669":null,"SJAG_01171":null,"SJAG_01181":null,"SJAG_01196":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01718":null,"SJAG_01754":null,"SJAG_01774":null,"SJAG_01787":null,"SJAG_01799":null,"SJAG_01855":null,"SJAG_01888":null,"SJAG_02022":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02215":null,"SJAG_02222":null,"SJAG_02379":null,"SJAG_02916":null,"SJAG_03379":null,"SJAG_03436":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_03625":null,"SJAG_03655":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03753":null,"SJAG_04322":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04690":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04901":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"division septum","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043187"],"synonyms":[{"name":"cell septum surface","type":"related"},{"name":"complete septum","type":"exact"},{"name":"septum surface","type":"broad"}],"termid":"GO:0000935","terms_by_termid":{"GO:0000935":null,"GO:0000936":null}}


id: PBO:0048154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forty-two-three domain containing 1 pseudogene 1","termid":"PBO:0048154"}


id: FYECO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethylene glycol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ethylene glycol","termid":"FYECO:0000325"}


id: GO:0044596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-demethylubiquinol-10 = S-adenosyl-L-homocysteine + ubiquinol-10.","definition_xrefs":["PMID:10777520"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-demethylubiquinol-10 3-O-methyltransferase activity (obsolete GO:0044596)","termid":"GO:0044596"}


id: PBO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg16","termid":"PBO:0036462"}


id: GO:0090073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of protein homodimerization activity","termid":"GO:0043496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein homodimerization activity","termid":"GO:0090073"}


id: PBO:0063024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 4","termid":"PBO:0063024"}


id: PBO:0070757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 13","termid":"PBO:0070757"}


id: GO:0039505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the normal processing and presentation of a peptide antigen on its cell surface in association with an MHC class II protein complex.","definition_xrefs":["GOC:bf","GOC:add","PMID:27832589","VZ:820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host antigen processing and presentation","termid":"GO:0039588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"inhibition of host MHC class II molecule presentation by virus","type":"narrow"},{"name":"suppression by virus of host antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"}],"termid":"GO:0039505"}


id: GO:0046549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell development","termid":"GO:0042462"},{"relation_name":"part_of","term_name":"retinal cone cell differentiation","termid":"GO:0042670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell development","termid":"GO:0046549"}


id: FYPO:0000103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to copper ions. Cells stop growing (and may die) at a concentration of copper ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to copper","synonyms":[{"name":"hypersensitive to copper","type":"exact"},{"name":"sensitive to copper during mitotic cell cycle","type":"related"},{"name":"sensitive to copper during vegetative growth","type":"exact"},{"name":"sensitive to copper ions","type":"exact"}],"termid":"FYPO:0000103"}


id: FYPO:0001663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is higher than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular cAMP level","termid":"FYPO:0001661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular cAMP level during glucose starvation","synonyms":[{"name":"increased cAMP accumulation during cellular response to glucose starvation","type":"related"},{"name":"increased cellular cAMP level during glucose depletion","type":"exact"},{"name":"increased cellular cAMP level during glucose deprivation","type":"exact"},{"name":"increased cellular cAMP level during glucose limitation","type":"related"},{"name":"increased cellular cAMP level in response to glucose starvation","type":"exact"},{"name":"increased cellular cyclic AMP level and during cellular response to glucose starvation","type":"exact"}],"termid":"FYPO:0001663"}


id: PBO:0061264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch receptor 4","termid":"PBO:0061264"}


id: PBO:0109618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC144A N-terminal like (pseudogene)","termid":"PBO:0109618"}


id: PBO:0051540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL6 antisense RNA 1","termid":"PBO:0051540"}


id: PBO:0070185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 103 pseudogene","termid":"PBO:0070185"}


id: PBO:0109623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM and PDZ domain containing 2B (pseudogene)","termid":"PBO:0109623"}


id: PBO:0038732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 6A","termid":"PBO:0038732"}


id: PBO:0043062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion","termid":"PBO:0043062"}


id: GO:0120330
data:
  {"annotated_genes":["SJAG_04062","SJAG_01056","SJAG_01581","SJAG_04252","SJAG_03789"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84819,100229,110728,113357,114729],"is_not":false,"summary":null,"term":"GO:0120330"}]},"cv_name":"cellular_component","definition":"A conserved RNA endonuclease complex required for spreading and epigenetic inheritance of heterochromatin. The rixosome contains six unique subunits: three structural subunits (Crb3, Rix1, and Ipi1) which form the core of the complex, and three catalytic subunits (the endonuclease Las1, the polynucleotide kinase Grc3, and the AAA-type ATPase Mdn1), which are involved in the processing of ribosomal RNA precursors. All subunits are essential for viability and are conserved from yeast to mammals, including humans.","definition_xrefs":["PMID:35355014","GOC:vw","PMID:32491985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01056":null,"SJAG_01581":null,"SJAG_03789":null,"SJAG_04062":null,"SJAG_04252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"rixosome complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"rix1 complex","type":"narrow"}],"termid":"GO:0120330","terms_by_termid":{"GO:0120330":null}}


id: GO:0005997
data:
  {"annotated_genes":["SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"xylulose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"xylulose metabolism","type":"exact"}],"termid":"GO:0005997","terms_by_termid":{"GO:0005998":null}}


id: FYPO:0006591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of DNA damage measured in a cell during S phase of the mitotic cell cycle is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage during mitotic S phase","synonyms":[{"name":"increased DNA damage during S phase during vegetative growth","type":"exact"},{"name":"increased DNA damage during S phase of mitotic cell cycle","type":"exact"},{"name":"increased number of DNA lesions during mitotic S phase","type":"related"}],"termid":"FYPO:0006591"}


id: PBO:0001108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase beta subunit (predicted)","termid":"PBO:0001108"}


id: PBO:0085626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in excretion of putrescine and spermidine; putative polyamine transporter in the Golgi or post-Golgi vesicles","termid":"PBO:0085626"}


id: SO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The canonical 3' splice site has the sequence \\\"AG\\\".","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_cis_splice_site","termid":"SO:0000164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canonical_three_prime_splice_site","synonyms":[{"name":"canonical 3' splice site","type":"exact"},{"name":"canonical three prime splice site","type":"exact"}],"termid":"SO:0000676"}


id: PBO:0081215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger matrin-type 5","termid":"PBO:0081215"}


id: PBO:0074677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 61","termid":"PBO:0074677"}


id: PBO:0071714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 12","termid":"PBO:0071714"}


id: PBO:0075637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2G","termid":"PBO:0075637"}


id: MOD:01515
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins that are nominally equal (sometimes called isobaric) at a resolution below 0.000001 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.000001 Da","termid":"MOD:01515"}


id: PBO:0079023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 6-1","termid":"PBO:0079023"}


id: GO:0018489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + vanillate = 3,4-dihydroxybenzoate + formaldehyde + H2O + NAD+.","definition_xrefs":["EC:1.14.13.82","RHEA:13021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"},{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"vanillate monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05274","UM-BBD_reactionID:r0146","MetaCyc:RXN-10891"],"synonyms":[{"name":"4-hydroxy-3-methoxybenzoate demethylase activity","type":"related"},{"name":"vanillate demethylase (aerobic) activity","type":"exact"},{"name":"vanillate demethylase activity","type":"exact"},{"name":"vanillate:oxygen oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0018489"}


id: PBO:0027524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_elongation","termid":"PBO:0027524"}


id: PBO:0085822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expression is regulated by phosphate levels","termid":"PBO:0085822"}


id: PBO:0053563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 574","termid":"PBO:0053563"}


id: GO:0002402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the mucosal-associated lymphoid tissue (MALT) mediated by B cells.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction in mucosal-associated lymphoid tissue","termid":"GO:0002401"},{"relation_name":"is_a","term_name":"peripheral B cell tolerance induction","termid":"GO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell tolerance induction in mucosal-associated lymphoid tissue","synonyms":[{"name":"B cell tolerance induction in MALT","type":"exact"}],"termid":"GO:0002402"}


id: GO:0051642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a centrosome is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center localization","termid":"GO:0061842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"centrosome localization","synonyms":[{"name":"centrosome localisation","type":"exact"},{"name":"establishment and maintenance of centrosome localization","type":"exact"}],"termid":"GO:0051642"}


id: GO:0050342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-tocopherol + S-adenosyl-L-methionine = (+)-alpha-tocopherol + H+ + S-adenosyl-L-homocysteine. This reaction can also use delta-tocopherol, gamma-tocotrienol and delta-tocotrienol as substrates.","definition_xrefs":["EC:2.1.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tocopherol C-methyltransferase activity","secondary_identifiers":["MetaCyc:TOCOPHEROL-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:gamma-tocopherol 5-O-methyltransferase activity","type":"related"},{"name":"gamma-tocopherol methyltransferase activity","type":"exact"},{"name":"tocopherol O-methyltransferase activity","type":"exact"}],"termid":"GO:0050342"}


id: PBO:0057239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 429","termid":"PBO:0057239"}


id: GO:0010312
data:
  {"annotated_genes":["SJAG_01078","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89806,89807],"is_not":false,"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of zinc ion. These include transport of zinc away from sensitive areas and to compartments or complexes whose purpose is sequestration of zinc ion.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"stress response to zinc ion","termid":"GO:1990359"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of zinc ion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010312","terms_by_termid":{"GO:0010312":null}}


id: FYPO:0004284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of oxanine DNA N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal oxanine DNA N-glycosylase activity","termid":"FYPO:0004283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased oxanine DNA N-glycosylase activity","synonyms":[{"name":"reduced oxanine DNA N-glycosylase activity","type":"exact"}],"termid":"FYPO:0004284"}


id: FYPO:0001970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased when cells are grown in medium containing aculeacin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity during growth on aculeacin A","termid":"FYPO:0001970"}


id: PBO:0054486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1886","termid":"PBO:0054486"}


id: PBO:0080445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 2","termid":"PBO:0080445"}


id: FYPO:0008150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA derived from rDNA intergenic repeat regions is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased non functional ncRNA level","termid":"FYPO:0008149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased rDNA intergenic repeat RNA level","synonyms":[{"name":"increased transcript level at rDNA intergenic region","type":"exact"}],"termid":"FYPO:0008150"}


id: PBO:0056959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 20b","termid":"PBO:0056959"}


id: FYPO:0004646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of anaphase of mitosis normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of mitotic anaphase","synonyms":[{"name":"normal duration of anaphase during mitotic cell cycle","type":"exact"},{"name":"normal duration of anaphase of mitosis","type":"related"},{"name":"normal duration of mitotic anaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0004646"}


id: GO:0018028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The myristoylation of peptidyl-lysine to form peptidyl-N6-myristoyl-L-lysine.","definition_xrefs":["RESID:AA0078"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine myristoylation (obsolete GO:0018028)","synonyms":[{"name":"peptidyl-lysine myristylation","type":"exact"}],"termid":"GO:0018028"}


id: PBO:0011120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A regulator, PTPA family Ypa1","termid":"PBO:0011120"}


id: PBO:0026892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_vegetative_growth","termid":"PBO:0026892"}


id: GO:0031465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul4B subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by unknown subunits.","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cul4-RING E3 ubiquitin ligase complex","termid":"GO:0080008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cul4B-RING E3 ubiquitin ligase complex","synonyms":[{"name":"cullin-RING ligase 4B","type":"exact"}],"termid":"GO:0031465"}


id: GO:0015777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of teichoic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Teichoic acid is any polymer occurring in the cell wall, membrane or capsule of Gram-positive bacteria and containing chains of glycerol phosphate or ribitol phosphate residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"teichoic acid transport","termid":"GO:0015777"}


id: PBO:0072463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 27","termid":"PBO:0072463"}


id: PBO:0074184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 5","termid":"PBO:0074184"}


id: PBO:0042196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D1 binding protein 1","termid":"PBO:0042196"}


id: GO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within involuntary skeletal muscle tissue, resulting in a change in muscle geometry. This process occurs in the diaphragm. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The diaphragm is a striated muscle that is necessary for the process of respiratory gaseous exchange.","definition_xrefs":["GOC:mtg_muscle","PMID:12458206","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"involuntary skeletal muscle contraction","termid":"GO:0003011"},{"relation_name":"is_a","term_name":"respiratory system process","termid":"GO:0003016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diaphragm contraction","termid":"GO:0002086"}


id: GO:0030893
data:
  {"annotated_genes":["SJAG_01831","SJAG_03926","SJAG_05019","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83845,103865,103944,113236],"is_not":false,"summary":null,"term":"GO:0030893"}]},"cv_name":"cellular_component","definition":"A cohesin complex that mediates sister chromatid cohesion during meiosis; has a subunit composition distinct from that of the mitotic cohesin complex.","definition_xrefs":["PMID:12750522","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cohesin complex","termid":"GO:0008278"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01831":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"meiotic cohesin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034991"],"synonyms":[{"name":"nuclear meiotic cohesin complex","type":"related"}],"termid":"GO:0030893","terms_by_termid":{"GO:0030893":null}}


id: GO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of endothelial cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"endothelial cell proliferation","termid":"GO:0001935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell proliferation","synonyms":[{"name":"activation of endothelial cell proliferation","type":"narrow"},{"name":"stimulation of endothelial cell proliferation","type":"narrow"},{"name":"up regulation of endothelial cell proliferation","type":"exact"},{"name":"up-regulation of endothelial cell proliferation","type":"exact"},{"name":"upregulation of endothelial cell proliferation","type":"exact"}],"termid":"GO:0001938"}


id: PBO:0073636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 22, pseudogene","termid":"PBO:0073636"}


id: PBO:0044882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 6B","termid":"PBO:0044882"}


id: PBO:0029020
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_mitotic_M_phase","termid":"PBO:0029020"}


id: PBO:0070981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 5","termid":"PBO:0070981"}


id: PBO:0057310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 517a","termid":"PBO:0057310"}


id: PBO:0039232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKTIP pseudogene 1","termid":"PBO:0039232"}


id: GO:1905072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cardiac jelly over time, from its formation to the mature structure. The cardiac jelly is an acellular gelatinous matrix secreted by the myocardium and plays a central role in the septation of the heart.","definition_xrefs":["GOC:TermGenie","PMID:10645959","PMID:19703439","PMID:16314491","GO_REF:0000094","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac jelly development","synonyms":[{"name":"heart cardiac jelly development","type":"exact"}],"termid":"GO:1905072"}


id: PBO:0088063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase subunit of the CCR4-NOT complex; with Ubc4p, ubiquitinates nascent polypeptide-associated complex subunits and histone demethyase Jhd2p; CCR4-NOT has roles in transcription regulation, mRNA degradation, and post-transcriptional modifications; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication","termid":"PBO:0088063"}


id: PBO:0068731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 2, pseudogene","termid":"PBO:0068731"}


id: GO:0097080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of inorganic selenite (HSeO3-1 at physiological pH) across a plasma membrane.","definition_xrefs":["PMID:20861301","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"plasma membrane selenite transport","synonyms":[{"name":"plasma membrane hydrogenselenite transport","type":"exact"}],"termid":"GO:0097080"}


id: GO:0038149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 2 (CCL2) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-C motif chemokine 2 receptor activity","synonyms":[{"name":"CCL2 receptor activity","type":"exact"}],"termid":"GO:0038149"}


id: PBO:0047378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 9","termid":"PBO:0047378"}


id: PBO:0088570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO activating enzyme E1-type Uba2","termid":"PBO:0088570"}


id: GO:0002827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a T-helper 1 type immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"},{"relation_name":"positively_regulates","term_name":"T-helper 1 type immune response","termid":"GO:0042088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 1 type immune response","synonyms":[{"name":"activation of T-helper 1 type immune response","type":"narrow"},{"name":"stimulation of T-helper 1 type immune response","type":"narrow"},{"name":"up regulation of T-helper 1 type immune response","type":"exact"},{"name":"up-regulation of T-helper 1 type immune response","type":"exact"},{"name":"upregulation of T-helper 1 type immune response","type":"exact"}],"termid":"GO:0002827"}


id: GO:0008046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular messenger and transmitting the signal from one side of the membrane to the other to results in a change in cellular activity involved in axon guidance.","definition_xrefs":["GOC:dph","GOC:signaling","PMID:15339666","GOC:tb","PMID:15107857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"axon guidance receptor activity","synonyms":[{"name":"receptor activity involved in axon guidance","type":"exact"}],"termid":"GO:0008046"}


id: PR:Q9P371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sst2 gene.","definition_xrefs":["UniProtKB:Q9P371","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMSH-like protease sst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.10","synonyms":[{"name":"Spom972h-sst2","type":"exact"},{"name":"suppressor of ste12 deletion protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P371"}


id: PBO:0075870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 10","termid":"PBO:0075870"}


id: PBO:0052207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 3","termid":"PBO:0052207"}


id: PR:O14267
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC7D4.12c gene.","definition_xrefs":["UniProtKB:O14267","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized UPF0442 protein C7D4.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.12c","synonyms":[{"name":"Spom972h-SPAC7D4.12c","type":"exact"}],"termid":"PR:O14267"}


id: GO:0039652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus initiates, promotes, or enhances an NF-kappaB signaling cascade in its host organism.","definition_xrefs":["PMID:7845680","PMID:11907233"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host NF-kappaB cascade (obsolete GO:0039652)","synonyms":[{"name":"activation by virus of host NF-kappaB transcription factor activity","type":"related"}],"termid":"GO:0039652"}


id: GO:0070684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive process in which coagulated semen becomes liquid following ejaculation, allowing the progressive release of motile spermatozoa.","definition_xrefs":["GOC:mah","PMID:18482984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"insemination","termid":"GO:0007320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seminal clot liquefaction","synonyms":[{"name":"semen liquefaction","type":"exact"}],"termid":"GO:0070684"}


id: PBO:0029951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_anaphase,_with_unseparated_sister_chromatids_(obsolete_FYPO:0001947)","termid":"PBO:0029951"}


id: PBO:0075615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide peptidase like 2A","termid":"PBO:0075615"}


id: GO:0035460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ascorbate 6-phosphate + H2O = 3-keto-L-gulonate 6-phosphate.","definition_xrefs":["PMID:18097099","PMID:20359483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"L-ascorbate 6-phosphate lactonase activity","secondary_identifiers":["RHEA:28803"],"termid":"GO:0035460"}


id: MOD:00823
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionine residue and an L-cysteine residue by a thioester bond to form S-(L-methionyl)-L-cysteine.","definition_xrefs":["PubMed:12146974","RESID:AA0413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-methionyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-4-(methylsulfanyl)butanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Methionyl cysteine thioester (Cys-Met)","type":"exact"},{"name":"S-(2-amino-4-methylthiobutanoyl)cysteine","type":"exact"},{"name":"S-(L-methionyl)-L-cysteine","type":"exact"},{"name":"XLNK1MetSCys","type":"exact"},{"name":"methionine cysteine thioester","type":"exact"}],"termid":"MOD:00823"}


id: PBO:0044683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible transcript 4 like","termid":"PBO:0044683"}


id: SO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recombination signal including V-heptamer, V-spacer and V-nonamer in 3' of V-region of a V-gene or V-sequence of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_gene_recombination_feature","synonyms":[{"name":"V gene recombination feature","type":"exact"},{"name":"V-RS","type":"exact"}],"termid":"SO:0000538"}


id: PBO:0034510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_filamentous_actin_level","termid":"PBO:0034510"}


id: PBO:0077699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNKS2 divergent transcript","termid":"PBO:0077699"}


id: GO:0030208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dermatan sulfate, any glycosaminoglycan with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"dermatan sulfate metabolic process","termid":"GO:0030205"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"part_of","term_name":"dermatan sulfate proteoglycan biosynthetic process","termid":"GO:0050651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"dermatan sulfate biosynthetic process","secondary_identifiers":["MetaCyc:PWY-6568"],"synonyms":[{"name":"dermatan sulfate formation","type":"exact"},{"name":"dermatan sulfate synthesis","type":"exact"},{"name":"dermatan sulfate biosynthesis","type":"exact"},{"name":"chondroitin sulfate B biosynthesis","type":"exact"},{"name":"chondroitin sulfate B biosynthetic process","type":"exact"},{"name":"dermatan sulfate anabolism","type":"exact"},{"name":"dermatan sulphate biosynthesis","type":"exact"},{"name":"dermatan sulphate biosynthetic process","type":"exact"}],"termid":"GO:0030208"}


id: PBO:0001889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor (predicted)","termid":"PBO:0001889"}


id: GO:0006685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin metabolic process","termid":"GO:0006684"},{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"sphingomyelin catabolic process","synonyms":[{"name":"sphingomyelin breakdown","type":"exact"},{"name":"sphingomyelin catabolism","type":"exact"},{"name":"sphingomyelin degradation","type":"exact"}],"termid":"GO:0006685"}


id: GO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension of a dendrite.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in retrograde extension","termid":"GO:0003392"},{"relation_name":"part_of","term_name":"dendrite development by retrograde extension","termid":"GO:0003390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in dendrite retrograde extension","termid":"GO:0003394"}


id: PBO:0039683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family B member 1","termid":"PBO:0039683"}


id: GO:1903639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gastrin-induced gastric acid secretion.","definition_xrefs":["PMID:11123201","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastric acid secretion","termid":"GO:0060453"},{"relation_name":"regulates","term_name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of gastrin-induced gastric acid secretion","termid":"GO:1903639"}


id: PBO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3m","termid":"PBO:0000321"}


id: PBO:0064906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 regulatory subunit B, beta","termid":"PBO:0064906"}


id: PBO:0061724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear VCP like","termid":"PBO:0061724"}


id: PBO:0028007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoskeleton","termid":"PBO:0028007"}


id: PBO:0108972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 3","termid":"PBO:0108972"}


id: GO:0031334
data:
  {"annotated_genes":["SJAG_00718","SJAG_03421","SJAG_00973","SJAG_00766","SJAG_01771","SJAG_01837","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85682,98471,112852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[101808,84252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001178"},{"annotations":[111349,85741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein complex assembly.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_00766":null,"SJAG_00973":null,"SJAG_01771":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of protein-containing complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein complex assembly","type":"narrow"},{"name":"positive regulation of protein complex assembly","type":"related"},{"name":"stimulation of protein complex assembly","type":"narrow"},{"name":"up regulation of protein complex assembly","type":"exact"},{"name":"up-regulation of protein complex assembly","type":"exact"},{"name":"upregulation of protein complex assembly","type":"exact"}],"termid":"GO:0031334","terms_by_termid":{"GO:0045899":null,"GO:1905561":null,"GO:2001178":null}}


id: FYPO:0008259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is decreased, and the localizatiion to the endosomal structure is increased. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PMID:22848669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell surface","termid":"FYPO:0008258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cell surface with increased localization to endosomal structures","termid":"FYPO:0008259"}


id: PBO:0040427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1 pseudogene 4","termid":"PBO:0040427"}


id: GO:0102215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiocyanate + S-adenosyl-L-methionine = methyl thiocyanate + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:28014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thiocyanate methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12189","EC:2.1.1.n4"],"termid":"GO:0102215"}


id: PBO:0049567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 3","termid":"PBO:0049567"}


id: GO:0031460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glycine betaine, N-trimethylglycine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glycine betaine transport","synonyms":[{"name":"N-trimethylglycine transport","type":"exact"}],"termid":"GO:0031460"}


