# terms

id: PR:Q10145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nab3 gene.","definition_xrefs":["UniProtKB:Q10145","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C3H8.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.09c","synonyms":[{"name":"Spom972h-nab3","type":"exact"}],"termid":"PR:Q10145"}


id: PBO:0048222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase family member 3, pseudogene","termid":"PBO:0048222"}


id: GO:0050086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol + NAD+ = D-fructose + NADH.","definition_xrefs":["EC:1.1.1.67","MetaCyc:MANNITOL-2-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannitol 2-dehydrogenase activity","secondary_identifiers":["RHEA:12084"],"synonyms":[{"name":"D-mannitol dehydrogenase activity","type":"related"},{"name":"D-mannitol:NAD+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0050086"}


id: PBO:0004675
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.13","termid":"PBO:0004675"}


id: FYPO:0005789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved along the long axis to form a \\\"C\\\" shape. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a C-shaped cell, the curve is centered at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"C-shaped vegetative cell","synonyms":[{"name":"C-shaped cell","type":"exact"},{"name":"C-shaped cell during vegetative growth","type":"exact"},{"name":"C-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, C-shaped","type":"exact"}],"termid":"FYPO:0005789"}


id: PBO:0068534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 136, pseudogene","termid":"PBO:0068534"}


id: PBO:0047640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 3","termid":"PBO:0047640"}


id: PBO:0081916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 885, pseudogene","termid":"PBO:0081916"}


id: GO:0016636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["EC:1.3.7.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","synonyms":[{"name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016636"}


id: PBO:0050741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 3","termid":"PBO:0050741"}


id: GO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, a mesodermal or neural crest cell that gives rise to bone.","definition_xrefs":["GOC:jid","GO_REF:0000034","CL:0000062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast differentiation","synonyms":[{"name":"osteoblast cell differentiation","type":"exact"}],"termid":"GO:0001649"}


id: GO:0046703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lectin-like natural killer cell receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"natural killer cell lectin-like receptor binding","synonyms":[{"name":"KLRC4 receptor binding","type":"narrow"},{"name":"NK cell lectin-like receptor binding","type":"exact"},{"name":"NKG2D receptor binding","type":"narrow"}],"termid":"GO:0046703"}


id: FYPO:0000344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"enlarged nucleus","termid":"FYPO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"enlarged nucleus during vegetative growth","synonyms":[{"name":"enlarged nuclei during vegetative growth","type":"exact"},{"name":"enlarged nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000344"}


id: PBO:0027515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actomyosin_contractile_ring_contraction","termid":"PBO:0027515"}


id: GO:0080011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = baruol. Baruol is also known as D:B-Friedo-Baccharan-5,21-dien-3-ol.","definition_xrefs":["PMID:17705488","RHEA:31987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"baruol synthase activity","secondary_identifiers":["MetaCyc:RXN-9685","EC:5.4.99.57"],"termid":"GO:0080011"}


id: PBO:0060237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB proto-oncogene like 2","termid":"PBO:0060237"}


id: PBO:0079904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase binding protein pseudogene 2","termid":"PBO:0079904"}


id: PR:O74173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor 1-beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11595:SF7","OMA:SCHPO04800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.04","secondary_identifiers":["UniProtKB:O74173"],"synonyms":[{"name":"EF-1-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EEF1B2","type":"exact"}],"termid":"PR:O74173"}


id: PBO:0043357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clarin 3","termid":"PBO:0043357"}


id: PBO:0059863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin 1","termid":"PBO:0059863"}


id: GO:0150151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-17A production.","definition_xrefs":["PMID:27901018","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"regulates","term_name":"interleukin-17A production","termid":"GO:0097087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-17A production","synonyms":[{"name":"regulation of interleukin-17A biosynthetic process","type":"narrow"}],"termid":"GO:0150151"}


id: PBO:0004757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 nucleotide exchange factor (predicted)","termid":"PBO:0004757"}


id: PBO:0061125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 14","termid":"PBO:0061125"}


id: FYPO:0003310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which IMP cyclohydrolase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal IMP cyclohydrolase activity","termid":"FYPO:0003309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished IMP cyclohydrolase activity","synonyms":[{"name":"IMP cyclohydrolase activity abolished","type":"exact"}],"termid":"FYPO:0003310"}


id: PBO:0067569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 724, pseudogene","termid":"PBO:0067569"}


id: FYPO:0002167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethyl methanesulfonate. Cells stop growing (and may die) at a concentration of ethyl methanesulfonate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to ethyl methanesulfonate","synonyms":[{"name":"hypersensitive to ethyl methanesulfonate","type":"exact"},{"name":"sensitive to EMS","type":"exact"},{"name":"sensitive to ethyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"sensitive to ethyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to ethyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002167"}


id: PBO:0084945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multifunctional enzyme containing phosphoribosyl-ATP pyrophosphatase; phosphoribosyl-AMP cyclohydrolase, and histidinol dehydrogenase activities; catalyzes the second, third, ninth and tenth steps in histidine biosynthesis","termid":"PBO:0084945"}


id: FYECO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium arsenite (NaAsO2) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NaAsO2","synonyms":[{"name":"sodium arsenite added","type":"exact"}],"termid":"FYECO:0000297"}


id: PBO:0079577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 A","termid":"PBO:0079577"}


id: PBO:0110074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQT complex CUE domain protein, human ASCC2 ortholog Rqt3","termid":"PBO:0110074"}


id: GO:0035330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hippo signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"hippo signaling","termid":"GO:0035329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of hippo signaling","synonyms":[{"name":"regulation of hippo signaling cascade","type":"related"},{"name":"regulation of hippo signaling pathway","type":"exact"},{"name":"regulation of hippo signalling cascade","type":"related"}],"termid":"GO:0035330"}


id: PBO:0044585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drebrin like","termid":"PBO:0044585"}


id: PBO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk9 (predicted)","termid":"PBO:0001067"}


id: GO:0045035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of four asymmetric divisions undergone by the sensory organ precursor cells to generate cells that have distinct cell fates. For example, in the external sensory organ, the precursor cells give rise to one multidendritic neuron and four additional cells (the socket, shaft, sheath cells and the external sense neuron).","definition_xrefs":["PMID:18295597","GOC:mah","PMID:11171389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"part_of","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ precursor cell division","synonyms":[{"name":"sense organ precursor cell division","type":"exact"}],"termid":"GO:0045035"}


id: PBO:0080672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wolframin ER transmembrane glycoprotein","termid":"PBO:0080672"}


id: PBO:0088472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal glutamine amidohydrolase, alpha beta roll superfamily","termid":"PBO:0088472"}


id: PBO:0055062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2478","termid":"PBO:0055062"}


id: PBO:0047789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 6","termid":"PBO:0047789"}


id: GO:0060531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquires specialized structural and functions of a neuroendocrine cell of the prostate gland acinus.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroendocrine cell differentiation involved in prostate gland acinus development","termid":"GO:0060531"}


id: PBO:0042541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8","termid":"PBO:0042541"}


id: GO:0004487
data:
  {"annotated_genes":["SJAG_01126"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100902],"is_not":false,"summary":null,"term":"GO:0004487"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NAD+ = 5,10-methenyltetrahydrofolate + NADH.","definition_xrefs":["RHEA:22892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity","termid":"GO:0004486"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6801462","KEGG_REACTION:R01218","EC:1.5.1.15","MetaCyc:1.5.1.15-RXN"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate dehydrogenase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:NAD+ oxidoreductase","type":"related"}],"termid":"GO:0004487","terms_by_termid":{"GO:0004487":null}}


id: GO:0097554
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It originates at the left anterior basal body, extends laterally through the cytoplasm, crosses the right anterior axoneme, and exits as a membrane-bound flagellum on the anterior left side of the cell.","definition_xrefs":["GOC:giardia","ISBN:9780124260207","PMID:16607022","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left anterior flagellum","synonyms":[{"name":"left anterior cilium","type":"exact"}],"termid":"GO:0097554"}


id: GO:1901803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1,5-anhydro-D-fructose.","definition_xrefs":["MetaCyc:PWY-6992","GOC:TermGenie","PMID:15716041","GOC:yaf","UniPathway:UPA00738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"1,5-anhydro-D-fructose metabolic process","termid":"GO:1901801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose biosynthetic process","synonyms":[{"name":"1,5-anhydro-D-fructose anabolism","type":"exact"},{"name":"1,5-anhydro-D-fructose biosynthesis","type":"exact"},{"name":"1,5-anhydro-D-fructose formation","type":"exact"},{"name":"1,5-anhydro-D-fructose synthesis","type":"exact"}],"termid":"GO:1901803"}


id: PBO:0038377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_treated_by_substance","termid":"PBO:0038377"}


id: PBO:0085802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; copurifies with late Golgi vesicles containing the v-SNARE Tlg2p; PTM1 has a paralog, YHL017W, that arose from the whole genome duplication","termid":"PBO:0085802"}


id: FYPO:0004608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle pole body is abnormal during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology during meiotic cell cycle","termid":"FYPO:0006406"},{"relation_name":"output_of","term_name":"abnormal prospore-specific spindle pole body remodeling","termid":"FYPO:0003561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0000631","FYPO:0005447","FYPO:0000121"],"is_obsolete":false,"name":"abnormal spindle pole body morphology during meiosis II","synonyms":[{"name":"abnormal SPB morphology during meiosis II","type":"exact"},{"name":"abnormal spindle pole body morphology during second meiotic nuclear division","type":"exact"},{"name":"abnormal spindle pole body structure during meiosis II","type":"narrow"}],"termid":"FYPO:0004608"}


id: GO:0140443
data:
  {"annotated_genes":["SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102707],"is_not":false,"summary":null,"term":"GO:0140443"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a mitochondrion and a plasma membrane either via membrane lipid binding or by interacting with a mitochondrial outer membrane protein, to establish or maintain the localization of the mitochondrion.","definition_xrefs":["PMID:31582398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"mitochondrion-plasma membrane adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrion plasma membrane adaptor activity","type":"exact"},{"name":"mitochondrion plasma membrane tether activity","type":"exact"},{"name":"plasma membrane-mitochondrion adaptor activity","type":"exact"},{"name":"plasma membrane-mitochondrion tether activity","type":"exact"}],"termid":"GO:0140443","terms_by_termid":{"GO:0140443":null}}


id: PBO:0003169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin ligase complex subunit, involved in proteasome-dependent catabolite inactivation of FBPase (predicted)","termid":"PBO:0003169"}


id: PBO:0043316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 6","termid":"PBO:0043316"}


id: GO:1905351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a pericyte cell from one site to another.","definition_xrefs":["GOC:BHF","GOC:rph","GO_REF:0000091","GOC:BHF_miRNA","GOC:TermGenie","PMID:26268439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericyte cell migration","termid":"GO:1905351"}


id: GO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","secondary_identifiers":["EC:1.1.5.-"],"termid":"GO:0016901"}


id: PBO:0079618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L3","termid":"PBO:0079618"}


id: GO:1903328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of tRNA metabolic process","termid":"GO:1903326"},{"relation_name":"positively_regulates","term_name":"tRNA metabolic process","termid":"GO:0006399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tRNA metabolic process","synonyms":[{"name":"activation of tRNA metabolic process","type":"narrow"},{"name":"activation of tRNA metabolism","type":"narrow"},{"name":"positive regulation of tRNA metabolism","type":"exact"},{"name":"up regulation of tRNA metabolic process","type":"exact"},{"name":"up regulation of tRNA metabolism","type":"exact"},{"name":"up-regulation of tRNA metabolic process","type":"exact"},{"name":"up-regulation of tRNA metabolism","type":"exact"},{"name":"upregulation of tRNA metabolic process","type":"exact"},{"name":"upregulation of tRNA metabolism","type":"exact"}],"termid":"GO:1903328"}


id: FYPO:0004243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to DNA damage","synonyms":[{"name":"decreased protein kinase activity in response to DNA damage","type":"related"},{"name":"reduced protein kinase activity during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0004243"}


id: PBO:0089718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase complex PHD finger subunit Nto1","termid":"PBO:0089718"}


id: PBO:0046908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member C","termid":"PBO:0046908"}


id: PBO:0030250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-trehalose_absent_from_cell_during_heat_shock","termid":"PBO:0030250"}


id: GO:0044653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dextrin + H2O = alpha-D-glucose.","definition_xrefs":["PMID:18556189"],"gene_count":0,"genotype_count":0,"name":"obsolete dextrin alpha-glucosidase activity (obsolete GO:0044653)","termid":"GO:0044653"}


id: PBO:0052140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 7","termid":"PBO:0052140"}


id: PR:Q9HE11
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 43 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.01","secondary_identifiers":["UniProtKB:Q9HE11"],"synonyms":[{"name":"Spom972h-WDR43","type":"exact"},{"name":"U3 protein 5 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE11"}


id: PBO:0030845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_at_high_temperature","termid":"PBO:0030845"}


id: PBO:0049165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 7","termid":"PBO:0049165"}


id: GO:0102087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzoate + L-glutamate + ATP = H+ + N-benzoyl-L-glutamate + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete N-benzoyl-L-glutamate synthetase activity (obsolete GO:0102087)","termid":"GO:0102087"}


id: PBO:0084268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p","termid":"PBO:0084268"}


id: GO:0097317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of a biotic stimulus. An example of this is Candida albicans forming invasive filaments in agar medium in response to a serum stimulus.","definition_xrefs":["GOC:di","PMID:18679170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"},{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to biotic stimulus","termid":"GO:0097317"}


id: PBO:0044051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSRP2 pseudogene 2","termid":"PBO:0044051"}


id: SO:0001274
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified inosine is an inosine base feature that has been altered.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine","termid":"SO:0001230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_inosine","synonyms":[{"name":"modified inosine","type":"exact"}],"termid":"SO:0001274"}


id: FYPO:0005907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to heat","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to heat","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0005907"}


id: GO:0004540
data:
  {"annotated_genes":["SJAG_00841","SJAG_04885","SJAG_04527","SJAG_04091","SJAG_03539","SJAG_00400","SJAG_04519","SJAG_04019","SJAG_04824","SJAG_03745","SJAG_06586","SJAG_03876","SJAG_00306","SJAG_04153","SJAG_01798","SJAG_01884","SJAG_03276","SJAG_02547","SJAG_02621","SJAG_01836","SJAG_05214","SJAG_02540","SJAG_03796","SJAG_02156","SJAG_01431","SJAG_01260","SJAG_00401","SJAG_01433","SJAG_01822","SJAG_03425","SJAG_03962","SJAG_06613","SJAG_16455","SJAG_04369","SJAG_04435","SJAG_02374","SJAG_04006","SJAG_04587","SJAG_04198","SJAG_03234","SJAG_02553","SJAG_01463","SJAG_00253","SJAG_01476","SJAG_06022","SJAG_01948","SJAG_03689","SJAG_03952","SJAG_01551","SJAG_01623","SJAG_02039","SJAG_03328","SJAG_00955","SJAG_04916","SJAG_03132","SJAG_00081","SJAG_00997","SJAG_00754","SJAG_04818","SJAG_02993","SJAG_04407","SJAG_04084","SJAG_04582","SJAG_00772","SJAG_04907","SJAG_00966","SJAG_02275","SJAG_02790"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86347,86416,92120,103596,111829,111872],"is_not":false,"summary":null,"term":"GO:0004540"},{"annotations":[91680,99787,99048,103592,88277,104621,111823,107395,86011,111491,112780,103913,101382,98176,95020,100524,114481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[88177,106035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042781"},{"annotations":[86654,86344,91005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[87719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140432"},{"annotations":[98270,104623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032296"},{"annotations":[114271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070551"},{"annotations":[110586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[87722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990174"},{"annotations":[111828,89444,109074,103914,112781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[89768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"},{"annotations":[72528,105977,112161,98272,99549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004525"},{"annotations":[111559,100889,101778,111472,92857,114767,100668,109648,90752,101777,95574,92561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000171"},{"annotations":[111473,98144,100669,109649,92858,95575,114768,100890,90753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[103594,112503,105137,114248,91886,85068,85555,84385,86415,86656,109075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004521"},{"annotations":[114273,88235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016891"},{"annotations":[95702,88278,97124,103595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004532"},{"annotations":[86261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008419"},{"annotations":[94195,99054,84342,105262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004523"},{"annotations":[96885,102042,97423,113860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":68,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00253":null,"SJAG_00306":null,"SJAG_00400":null,"SJAG_00401":null,"SJAG_00754":null,"SJAG_00772":null,"SJAG_00841":null,"SJAG_00955":null,"SJAG_00966":null,"SJAG_00997":null,"SJAG_01260":null,"SJAG_01431":null,"SJAG_01433":null,"SJAG_01463":null,"SJAG_01476":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_01884":null,"SJAG_01948":null,"SJAG_02039":null,"SJAG_02156":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02540":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02621":null,"SJAG_02790":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03234":null,"SJAG_03276":null,"SJAG_03328":null,"SJAG_03425":null,"SJAG_03539":null,"SJAG_03689":null,"SJAG_03745":null,"SJAG_03796":null,"SJAG_03876":null,"SJAG_03952":null,"SJAG_03962":null,"SJAG_04006":null,"SJAG_04019":null,"SJAG_04084":null,"SJAG_04091":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04435":null,"SJAG_04519":null,"SJAG_04527":null,"SJAG_04582":null,"SJAG_04587":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04885":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_05214":null,"SJAG_06022":null,"SJAG_06586":null,"SJAG_06613":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0140098","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"RNA nuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribonuclease activity","type":"exact"}],"termid":"GO:0004540","terms_by_termid":{"GO:0000171":null,"GO:0000175":null,"GO:0000213":null,"GO:0004521":null,"GO:0004523":null,"GO:0004525":null,"GO:0004526":null,"GO:0004532":null,"GO:0004534":null,"GO:0004535":null,"GO:0004540":null,"GO:0008419":null,"GO:0008859":null,"GO:0016891":null,"GO:0032296":null,"GO:0042781":null,"GO:0070551":null,"GO:0140432":null,"GO:1990174":null,"GO:1990838":null}}


id: PBO:0013439
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor Overexpression Elongated","termid":"PBO:0013439"}


id: PBO:0050104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 14","termid":"PBO:0050104"}


id: PBO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication pre-initiation complex subunit Sld3","termid":"PBO:0000386"}


id: GO:1902086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumagillin.","definition_xrefs":["PMID:23488861","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"fumagillin metabolic process","termid":"GO:1902084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"fumagillin biosynthetic process","synonyms":[{"name":"fumagillin anabolism","type":"exact"},{"name":"fumagillin biosynthesis","type":"exact"},{"name":"fumagillin formation","type":"exact"},{"name":"fumagillin synthesis","type":"exact"}],"termid":"GO:1902086"}


id: PBO:0071340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 4","termid":"PBO:0071340"}


id: PBO:0054494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1894","termid":"PBO:0054494"}


id: PBO:0000665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Gsk3","termid":"PBO:0000665"}


id: PBO:0028621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U2-type_prespliceosome_assembly","termid":"PBO:0028621"}


id: GO:0097400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-17 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ic","PMID:21602493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-17","termid":"GO:0097398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-17-mediated signaling pathway","synonyms":[{"name":"IL-17-mediated signaling pathway","type":"exact"},{"name":"IL-17-mediated signalling pathway","type":"exact"},{"name":"interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:0097400"}


id: PBO:0074043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A25 antisense RNA 1","termid":"PBO:0074043"}


id: PBO:0058170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4465","termid":"PBO:0058170"}


id: PBO:0069988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1283, pseudogene","termid":"PBO:0069988"}


id: PBO:0084547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors","termid":"PBO:0084547"}


id: PBO:0038685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin alpha 1, skeletal muscle","termid":"PBO:0038685"}


id: GO:2000067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of root morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant organ morphogenesis","termid":"GO:1905421"},{"relation_name":"regulates","term_name":"root morphogenesis","termid":"GO:0010015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of root morphogenesis","termid":"GO:2000067"}


id: GO:0070800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of conidiophore stalk development, a process that leads to the formation of a conidiophore stalk. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of conidiophore stalk development","termid":"GO:0070799"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"conidiophore stalk development","termid":"GO:0070788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of conidiophore stalk development","termid":"GO:0070800"}


id: PBO:0075194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 6","termid":"PBO:0075194"}


id: PBO:0040395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E1 pseudogene 3","termid":"PBO:0040395"}


id: PBO:0071072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 74","termid":"PBO:0071072"}


id: GO:0035212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells.","definition_xrefs":["PMID:15066286","GOC:bf","PMID:1116643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell competition in a multicellular organism","termid":"GO:0035212"}


id: GO:1900612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving F-9775B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound metabolic process","termid":"GO:1901376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"F-9775B metabolic process","synonyms":[{"name":"F-9775B metabolism","type":"exact"}],"termid":"GO:1900612"}


id: GO:1900788
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pseurotin A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pseurotin A metabolic process","synonyms":[{"name":"Pseurotin metabolic process","type":"related"},{"name":"Pseurotin metabolism","type":"related"},{"name":"pseurotin A metabolism","type":"exact"}],"termid":"GO:1900788"}


id: PBO:0034325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_before","termid":"PBO:0034325"}


id: PBO:0045661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY30 domain containing 1","termid":"PBO:0045661"}


id: PBO:0066624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC8 guanine nucleotide exchange factor A","termid":"PBO:0066624"}


id: GO:0005989
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactose, the disaccharide galactopyranosyl-glucose.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose metabolic process","termid":"GO:0005988"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"lactose biosynthetic process","synonyms":[{"name":"lactose anabolism","type":"exact"},{"name":"lactose biosynthesis","type":"exact"},{"name":"lactose formation","type":"exact"},{"name":"lactose synthesis","type":"exact"}],"termid":"GO:0005989"}


id: PBO:0069073
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 320, pseudogene","termid":"PBO:0069073"}


id: GO:0019731
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against bacteria mediated through a body fluid. Examples of this process are the antibacterial humoral responses in Mus musculus and Drosophila melanogaster.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial humoral response","termid":"GO:0019730"},{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibacterial humoral response","secondary_identifiers":["GO:0019733","GO:0006961"],"termid":"GO:0019731"}


id: FYECO:0000172
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  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Zn ions","synonyms":[{"name":"zinc ions added","type":"exact"}],"termid":"FYECO:0000172"}


id: PBO:0056481
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrilin 3","termid":"PBO:0056481"}


id: PR:Q10135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine-specific histone demethylase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23E2.02","synonyms":[{"name":"Spom972h-lsd2","type":"exact"}],"termid":"PR:Q10135"}


id: GO:0023051
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id: PBO:0044074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage stimulation factor subunit 2","termid":"PBO:0044074"}


id: PBO:0072000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 2","termid":"PBO:0072000"}


id: PBO:0049963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 9","termid":"PBO:0049963"}


id: PBO:0028450
data:
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id: PBO:0055378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2808","termid":"PBO:0055378"}


id: GO:0046144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving D-alanine and related amino acids.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete D-alanine family amino acid metabolic process (obsolete GO:0046144)","synonyms":[{"name":"D-alanine family amino acid metabolism","type":"exact"}],"termid":"GO:0046144"}


id: GO:0051992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans,octa-cis-undecaprenyl phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine = di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UMP.","definition_xrefs":["RHEA:28386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016780"],"is_obsolete":false,"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity","secondary_identifiers":["EC:2.7.8.13","MetaCyc:PHOSNACMURPENTATRANS-RXN"],"termid":"GO:0051992"}


id: PBO:0063081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pappalysin 2","termid":"PBO:0063081"}


id: PBO:0050533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone PARylation factor 1","termid":"PBO:0050533"}


id: PBO:0000947
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative translation","termid":"PBO:0000947"}


id: PBO:0027711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_multiseptate_cell_during_stationary_phase","termid":"PBO:0027711"}


id: PBO:0044112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 75","termid":"PBO:0044112"}


id: GO:0102066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphoric acid + alpha-patchoulene.","definition_xrefs":["GOC:pz","EC:4.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"alpha-patchoulene synthase activityy","secondary_identifiers":["MetaCyc:RXN-10603"],"termid":"GO:0102066"}


id: PBO:0060483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 5","termid":"PBO:0060483"}


id: PBO:0050206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 23","termid":"PBO:0050206"}


id: GO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide production","termid":"GO:0002788"},{"relation_name":"negatively_regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antifungal peptide production","synonyms":[{"name":"down regulation of antifungal peptide production","type":"exact"},{"name":"down-regulation of antifungal peptide production","type":"exact"},{"name":"downregulation of antifungal peptide production","type":"exact"},{"name":"inhibition of antifungal peptide production","type":"narrow"}],"termid":"GO:0002789"}


id: GO:1990753
data:
  {"annotated_genes":["SJAG_01143","SJAG_00072","SJAG_01665","SJAG_04498","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89392,115629,115631,115636,115638,115757],"is_not":false,"summary":null,"term":"GO:1990753"}]},"cv_name":"cellular_component","definition":"The region of the cell cortex in a mitotically dividing cell that flanks the central spindle and corresponds to the site of actomyosin ring formation that results in cleavage furrow formation and ingression.","definition_xrefs":["PMID:16352658","GOC:kmv","PMID:22552143","PMID:23750214","PMID:25898168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"equatorial cell cortex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null},"termid":"GO:1990753","terms_by_termid":{"GO:0000085":null,"GO:0051325":null,"GO:0051329":null,"GO:1990753":null}}


id: GO:0106359
data:
  {"annotated_genes":["SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107982],"is_not":false,"summary":null,"term":"GO:0106359"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-hydroxy fatty acyl-CoA = a fatty aldehyde + formyl-CoA. The reaction acts on 2-hydroxy-3-methyl-branched fatty acyl-CoA and 2-hydroxy-long-chain fatty acyl-CoA.","definition_xrefs":["PMID:28289220","PMID:21708296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyacyl-CoA lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.1.2.63","MetaCyc:RXN66-471"],"termid":"GO:0106359","terms_by_termid":{"GO:0106359":null}}


id: PBO:0085642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in lipid droplet (LD) assembly; forms a complex with Sei1p at ER-LD contact sites, stabilizing contact sites; ensures that LDs bud from the ER towards the cytosolic side of the membrane; null mutants have decreased net negative cell surface charge and localized accumulation of phosphatidic acid (PA) marker proteins; GFP-fusion protein expression is induced in response to MMS; null mutant can be complemented by the human seipin, BSCL2","termid":"PBO:0085642"}


id: GO:2000571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-4-dependent isotype switching to IgE isotypes.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isotype switching to IgE isotypes","termid":"GO:0048293"},{"relation_name":"regulates","term_name":"interleukin-4-dependent isotype switching to IgE isotypes","termid":"GO:0035708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-4-dependent isotype switching to IgE isotypes","synonyms":[{"name":"regulation of IL-4-dependent isotype switching to IgE isotypes","type":"exact"}],"termid":"GO:2000571"}


id: GO:0051550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aurones, a series of plant flavonoids that provide a yellow colour to flowers. They have the basic skeletal structure of two benzene rings joined by a linear C3 chain (C6-C3-C6). Aurones exist mostly as 6-O-glucosides.","definition_xrefs":["PMID:20035037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aurone metabolic process","synonyms":[{"name":"aurone metabolism","type":"exact"},{"name":"benzalcoumaran-3-one metabolic process","type":"exact"},{"name":"benzalcoumaran-3-one metabolism","type":"exact"}],"termid":"GO:0051550"}


id: PBO:0048803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 3","termid":"PBO:0048803"}


id: GO:0140200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adrenergic receptor signaling pathway that modulates the frequency or rate of heart contraction.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate cyclase-activating adrenergic receptor signaling pathway involved in regulation of heart rate (obsolete GO:0140200)","termid":"GO:0140200"}


id: PBO:0083655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceII; encoded by a mobile group I intron within the mitochondrial COX1 gene; intron is normally spliced by the BI4p maturase but AI4p can mutate to acquire the same maturase activity","termid":"PBO:0083655"}


id: SO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operon whose transcription is coordinated on several mutually overlapping transcription units transcribed in the same direction and sharing at least one gene.","definition_xrefs":["PMID:32665585","Bacterial_regulation_working_group:CMA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"operon","termid":"SO:0000178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_operon","synonyms":[{"name":"complex operon","type":"exact"}],"termid":"SO:0002299"}


id: PBO:0092014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b, Cob1","termid":"PBO:0092014"}


id: GO:0048511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhythmic process","synonyms":[{"name":"rhythm","type":"related"}],"termid":"GO:0048511"}


id: PBO:0048293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase","termid":"PBO:0048293"}


id: GO:0102047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + glycine + ATP(4-) = H+ + indole-3-acetyl-glycine + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz","PMID:15659623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"indole-3-acetyl-glycine synthetase activity","secondary_identifiers":["MetaCyc:RXN-10429"],"termid":"GO:0102047"}


id: GO:1903085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sinapate ester biosynthesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11080161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"sinapate ester biosynthetic process","termid":"GO:0033525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of sinapate ester biosynthetic process","synonyms":[{"name":"regulation of sinapate ester anabolism","type":"exact"},{"name":"regulation of sinapate ester biosynthesis","type":"exact"},{"name":"regulation of sinapate ester formation","type":"exact"},{"name":"regulation of sinapate ester synthesis","type":"exact"}],"termid":"GO:1903085"}


id: PBO:0005894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Proline, mitochondrial","termid":"PBO:0005894"}


id: PBO:0078510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 4","termid":"PBO:0078510"}


id: GO:0044592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of pullulan stimulus.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pullulan","termid":"GO:0044592"}


id: PBO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6","termid":"PBO:0000187"}


id: PBO:0058192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4485","termid":"PBO:0058192"}


id: FYPO:0007175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abolished during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane at cell division site during mitotic interphase","synonyms":[{"name":"abolished protein localisation to plasma membrane at cell division site during mitotic interphase","type":"exact"},{"name":"abolished protein localization in plasma membrane at cell division site during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cell membrane at cell division site during mitotic interphase","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during interphase of mitotic cell cycle","type":"exact"},{"name":"protein localization to plasma membrane at cell division site abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007175"}


id: GO:0015976
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85245],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043609"}]},"cv_name":"biological_process","definition":"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary carbon sources and then activates genes to scavenge the last traces of the primary carbon source and to transport and metabolize alternative carbon sources such as carbon dioxide or carbonic acid. The utilization process begins when the cell or organism detects carbon levels, includes the activation of genes whose products detect, transport or metabolize carbon-containing substances, and ends when carbon is incorporated into the cell or organism's metabolism.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbon utilization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015978","Wikipedia:Heterotroph"],"synonyms":[{"name":"carbon utilization by utilization of organic compounds","type":"exact"},{"name":"heterotrophy","type":"exact"}],"termid":"GO:0015976","terms_by_termid":{"GO:0043609":null}}


id: GO:0070467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains DNA ligase III, DNA polymerase epsilon, a 5'-3' exonuclease, and the SMC1 and SMC2 proteins, and is involved in recombinational repair of deletions and gaps in DNA.","definition_xrefs":["PMID:8392064","PMID:8670910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RC-1 DNA recombination complex","synonyms":[{"name":"DNA recombination complex RC-1","type":"exact"},{"name":"RC-1 complex (recombination complex 1)","type":"exact"}],"termid":"GO:0070467"}


id: PBO:0043941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod homeobox","termid":"PBO:0043941"}


id: MOD:01057
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dibromo-L-tyrosine","termid":"MOD:01023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br and (81)Br labeled 3',5'-dibromotyrosine","termid":"MOD:01057"}


id: PR:Q9C1W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1W9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.06","synonyms":[{"name":"DNA ligase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-adl1","type":"exact"},{"name":"polydeoxyribonucleotide synthase [ATP] 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C1W9"}


id: GO:0140272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex from a different species, for example a pathogen molecule binding to a host protein.","definition_xrefs":["PMID:28861068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"exogenous protein binding","termid":"GO:0140272"}


id: FYPO:0000573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal shmoo formation","synonyms":[{"name":"normal conjugation tube formation","type":"exact"},{"name":"normal mating projection assembly","type":"exact"},{"name":"normal mating projection formation","type":"exact"},{"name":"normal shmoo assembly","type":"exact"},{"name":"shmoo formation: normal","type":"related"}],"termid":"FYPO:0000573"}


id: FYPO:0005981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the termination of RNA transcription RNA polymerase I from a DNA template is abnormal.","definition_xrefs":["GO:0006363","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase I transcription","synonyms":[{"name":"abnormal RNA polymerase I transcription termination","type":"exact"},{"name":"abnormal termination of RNA polymerase I transcription during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase I transcription during vegetative growth","type":"exact"},{"name":"abnormal transcription termination from Pol I promoter","type":"exact"},{"name":"abnormal transcription termination from RNA polymerase I promoter","type":"exact"}],"termid":"FYPO:0005981"}


id: PBO:0113269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid hydroperoxide glutathione peroxidase; late-acting antioxidant system that decreases mitochondrial ROS production and preserves electron transport chain (ETC) function; protects cells from phospholipid hydroperoxides and nonphospholipid peroxides during oxidative stress; induced by glucose starvation; protein abundance increases in response to DNA replication stress","termid":"PBO:0113269"}


id: PBO:0053744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 971","termid":"PBO:0053744"}


id: GO:0047951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-acylglutathione + H2O = a carboxylate + glutathione + H+.","definition_xrefs":["RHEA:22708","EC:3.1.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glutathione thiolesterase activity","secondary_identifiers":["MetaCyc:GLUTATHIONE-THIOESTERASE-RXN","KEGG_REACTION:R00547"],"synonyms":[{"name":"S-acylglutathione hydrolase activity","type":"related"},{"name":"citryl-glutathione thioesterhydrolase activity","type":"related"},{"name":"glutathione thioesterase activity","type":"exact"}],"termid":"GO:0047951"}


id: PBO:0079494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 15","termid":"PBO:0079494"}


id: GO:0052724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 3-diphospho-1D-myo-inositol (1,2,4,5,6)pentakisphosphate.","definition_xrefs":["PMID:18981179","MetaCyc:RXN-10971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"inositol hexakisphosphate 3-kinase activity","termid":"GO:0052724"}


id: GO:0019099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in a female organism's germ line.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination, germ-line","termid":"GO:0007542"},{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"},{"relation_name":"is_a","term_name":"female sex determination","termid":"GO:0030237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line sex determination","secondary_identifiers":["GO:0007544"],"synonyms":[{"name":"sex determination, female germ-line determination","type":"exact"}],"termid":"GO:0019099"}


id: GO:1901908
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine hexaphosphate.","definition_xrefs":["PMID:10090752","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"diadenosine hexaphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine hexaphosphate metabolism","type":"exact"},{"name":"diadenosyl hexaphosphate metabolic process","type":"exact"},{"name":"diadenosyl hexaphosphate metabolism","type":"exact"}],"termid":"GO:1901908","terms_by_termid":{"GO:1901909":null}}


id: PBO:0027758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitotic_metaphase","termid":"PBO:0027758"}


id: GO:1900829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-tyrosine.","definition_xrefs":["PMID:10766779","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-tyrosine metabolic process","termid":"GO:1900828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"D-tyrosine catabolic process","synonyms":[{"name":"D-tyrosine breakdown","type":"exact"},{"name":"D-tyrosine catabolism","type":"exact"},{"name":"D-tyrosine degradation","type":"exact"}],"termid":"GO:1900829"}


id: PBO:0085845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; null mutation suppresses cdc13-1 temperature sensitivity","termid":"PBO:0085845"}


id: GO:0045198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an epithelial cell.","definition_xrefs":["GOC:ascb_2009","GOC:bf","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarized epithelial cell differentiation","termid":"GO:0030859"},{"relation_name":"is_a","term_name":"establishment of apical/basal cell polarity","termid":"GO:0035089"},{"relation_name":"is_a","term_name":"establishment or maintenance of epithelial cell apical/basal polarity","termid":"GO:0045197"},{"relation_name":"is_a","term_name":"establishment of epithelial cell polarity","termid":"GO:0090162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"}


id: PBO:0089905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal signaling protein Slm1","termid":"PBO:0089905"}


id: PBO:0004597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6 (predicted)","termid":"PBO:0004597"}


id: PBO:0041718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin 3","termid":"PBO:0041718"}


id: PBO:0058583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6716","termid":"PBO:0058583"}


id: GO:0030662
data:
  {"annotated_genes":["SJAG_04002","SJAG_02805","SJAG_02177","SJAG_02453","SJAG_05345","SJAG_04644","SJAG_04569","SJAG_00104","SJAG_03153","SJAG_04609","SJAG_01809","SJAG_04474","SJAG_02539","SJAG_04023","SJAG_00557","SJAG_00192","SJAG_01633","SJAG_02349","SJAG_00108","SJAG_03907","SJAG_05344","SJAG_01939","SJAG_00800","SJAG_04517","SJAG_01167","SJAG_04070","SJAG_00906","SJAG_04513","SJAG_00284","SJAG_04391","SJAG_00379","SJAG_04565","SJAG_01508","SJAG_00072","SJAG_02234","SJAG_02482","SJAG_03558","SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97208,108930,109151,115054],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[104459,107737,92323,107797],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[109055,90931],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[111036,114663],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[84937,115055,90226,97209,109155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030665"},{"annotations":[100233,112544,113577,99371,94616,89253,103246,109905,94527],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[89389,108861,91561,104854,106340,108121,74000,112765,70461,102676],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[105930,110350,91601,104152,97160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00557":null,"SJAG_00800":null,"SJAG_00906":null,"SJAG_01167":null,"SJAG_01508":null,"SJAG_01633":null,"SJAG_01809":null,"SJAG_01939":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02805":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"coated vesicle membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030662","terms_by_termid":{"GO:0012507":null,"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030665":null}}


id: PBO:0089148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA:L-glutamate N-acetyltransferase","termid":"PBO:0089148"}


id: GO:1901089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any acetate ester metabolic process that is involved in fermentation.","definition_xrefs":["GOC:sgd_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"},{"relation_name":"part_of","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"acetate ester metabolic process involved in fermentation","synonyms":[{"name":"acetate ester metabolic process during fermentation","type":"exact"}],"termid":"GO:1901089"}


id: PBO:0027627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_plasmid_catenanes","termid":"PBO:0027627"}


id: PBO:0113426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Selective autophagy receptor involved in aggrephagy and proteaphagy; ubiquitin (Ub)-binding protein that functions as a Ub-Atg8p adaptor in Ub-dependent autophagy; serves as a proteaphagy receptor for inactivate 26S proteasomes; contains a CUE domain that binds K48-and K63-linked Ub chains and monoubiquitin, facilitating intramolecular monoubiquitination; human TOLLIP is a functional CUE-domain homolog, that complements a null mutant, rescuing the hypersensitivity of the null mutant to Htt-96Q","termid":"PBO:0113426"}


id: GO:0061145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle in the lung over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle tissue development","termid":"GO:0048745"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung smooth muscle development","termid":"GO:0061145"}


id: PBO:0066365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 8","termid":"PBO:0066365"}


id: PR:O14147
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent DNA helicase DDX11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02244","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase chl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.11","secondary_identifiers":["UniProtKB:O14147"],"synonyms":[{"name":"Spom972h-DDX11","type":"exact"},{"name":"chromosome loss protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14147"}


id: PBO:0068202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 509","termid":"PBO:0068202"}


id: GO:0004452
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97967],"is_not":false,"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isopentenyl diphosphate = dimethylallyl diphosphate.","definition_xrefs":["RHEA:23284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"isopentenyl-diphosphate delta-isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01123","EC:5.3.3.2","MetaCyc:IPPISOM-RXN","Reactome:R-HSA-191382"],"synonyms":[{"name":"IPP isomerase activity","type":"related"},{"name":"isopentenyl-diphosphate D-isomerase activity","type":"exact"},{"name":"isopentenyl-diphosphate delta3-delta2-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate delta-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate isomerase activity","type":"related"},{"name":"methylbutenylpyrophosphate isomerase activity","type":"related"}],"termid":"GO:0004452","terms_by_termid":{"GO:0004452":null}}


id: PBO:0058780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7114","termid":"PBO:0058780"}


id: PBO:0068395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 214","termid":"PBO:0068395"}


id: GO:0031064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the removal of acetyl groups from histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylation (obsolete GO:0031064)","synonyms":[{"name":"down regulation of histone deacetylation","type":"exact"},{"name":"down-regulation of histone deacetylation","type":"exact"},{"name":"downregulation of histone deacetylation","type":"exact"},{"name":"inhibition of histone deacetylation","type":"narrow"}],"termid":"GO:0031064"}


id: PBO:0061625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 9","termid":"PBO:0061625"}


id: GO:0000811
data:
  {"annotated_genes":["SJAG_00696","SJAG_00536","SJAG_00874","SJAG_01624"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89012,108047,109308,109636],"is_not":false,"summary":null,"term":"GO:0000811"}]},"cv_name":"cellular_component","definition":"A heterotetrameric protein complex that associates with replication origins, where it is required for the initiation of DNA replication, and with replication forks.","definition_xrefs":["GOC:rn","GOC:rb","PMID:12730134","PMID:17467990","PMID:16990792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex","termid":"GO:0031261"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00536":null,"SJAG_00696":null,"SJAG_00874":null,"SJAG_01624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0032991","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"GINS complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Go, Ichi, Ni and San complex","type":"exact"}],"termid":"GO:0000811","terms_by_termid":{"GO:0000811":null}}


id: GO:0035544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of assembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of SNARE complex assembly","termid":"GO:0035542"},{"relation_name":"negatively_regulates","term_name":"SNARE complex assembly","termid":"GO:0035493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0065003","GO:0008150","GO:0044085","GO:0016192"],"is_obsolete":false,"name":"negative regulation of SNARE complex assembly","termid":"GO:0035544"}


id: GO:0048537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of mucosal-associated lymphoid tissue over time, from its formation to the mature structure. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosa-associated lymphoid tissue development","synonyms":[{"name":"BALT development","type":"narrow"},{"name":"GALT development","type":"narrow"},{"name":"NALT development","type":"narrow"},{"name":"bronchial-associated lymphoid tissue development","type":"narrow"},{"name":"gut-associated lymphoid tissue development","type":"narrow"},{"name":"mucosal-associated lymphoid tissue development","type":"exact"},{"name":"nasopharyngeal-associated lymphoid tissue development","type":"narrow"}],"termid":"GO:0048537"}


id: PBO:0043913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRLF3 pseudogene 3","termid":"PBO:0043913"}


id: PBO:0114084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, predicted carbohydrate binding","termid":"PBO:0114084"}


id: PBO:0045679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 2 light intermediate chain 1","termid":"PBO:0045679"}


id: PBO:0062334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 73 pseudogene","termid":"PBO:0062334"}


id: PBO:0088529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex WD repeat subunit Rna4","termid":"PBO:0088529"}


id: PBO:0052831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 224, pseudogene","termid":"PBO:0052831"}


id: GO:0048703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the viscerocranium are generated and organized during the embryonic phase. The viscerocranium is the part of the skull comprising the facial bones.","definition_xrefs":["PMID:16049113","GOC:dsf","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic cranial skeleton morphogenesis","termid":"GO:0048701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic viscerocranium morphogenesis","synonyms":[{"name":"embryonic pharyngeal skeleton morphogenesis","type":"exact"}],"termid":"GO:0048703"}


id: PBO:0090948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh6","termid":"PBO:0090948"}


id: PBO:0082650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Shu complex (aka PCSS complex); Shu complex also includes Psy3, Csm2, Shu1, and promotes error-free DNA repair, Shu complex mediates inhibition of Srs2p function; promotes formation of Rad51p filaments; important for both mitotic and meiotic homologous recombination, and contains a conserved SWIM domain that is necessary for both","termid":"PBO:0082650"}


id: FYPO:0007643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal in centromere outer repeat regions during G0 phase.","definition_xrefs":["PMID:27738016","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during G0","termid":"FYPO:0007641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during G0","synonyms":[{"name":"decreased histone H3 K9 dimethylation at centromere outer repeat during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere otr during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during cell quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at pericentric region during G0","type":"related"},{"name":"decreased histone H3-K9 dimethylation at pericentromeric region during G0","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere outer repeat during G0","type":"exact"},{"name":"decreased histone H3K9me2 dimethylation at centromere outer repeat during G0","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere outer repeat during G0","type":"exact"}],"termid":"FYPO:0007643"}


id: PATO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's being turned inward upon itself.","definition_xrefs":["die.net:die.net"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"introverted","termid":"PATO:0001856"}


id: PBO:0086752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted to have thiol-disulfide oxidoreductase active site; YOL024W has a paralog, IGD1, that arose from the whole genome duplication","termid":"PBO:0086752"}


id: PBO:0076162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1P4-STRA6LP-CCDC180 readthrough","termid":"PBO:0076162"}


id: PATO:0001915
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front and upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior to","termid":"PATO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterodorsal to","termid":"PATO:0001915"}


id: GO:0009396
data:
  {"annotated_genes":["SJAG_02408","SJAG_01126","SJAG_01198","SJAG_03224","SJAG_00815","SJAG_01616","SJAG_00106","SJAG_04156","SJAG_00529","SJAG_03275","SJAG_02225"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100703],"is_not":false,"summary":null,"term":"GO:0009396"},{"annotations":[108562,104474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[67659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[108563,109833,100900,104475,86331,101053,102195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[102196,86333,109834,101054,110216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[88968,100865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of folic acid and its derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"pteridine-containing compound biosynthetic process","termid":"GO:0042559"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00529":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01616":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03224":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042559","GO:0008150"],"is_obsolete":false,"name":"folic acid-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"folate and derivative biosynthesis","type":"exact"},{"name":"folate and derivative biosynthetic process","type":"exact"},{"name":"folate-containing compound biosynthesis","type":"exact"},{"name":"folate-containing compound biosynthetic process","type":"exact"},{"name":"folic acid and derivative biosynthesis","type":"exact"},{"name":"folic acid and derivative biosynthetic process","type":"exact"},{"name":"folic acid-containing compound anabolism","type":"exact"},{"name":"folic acid-containing compound biosynthesis","type":"exact"},{"name":"folic acid-containing compound formation","type":"exact"},{"name":"folic acid-containing compound synthesis","type":"exact"},{"name":"vitamin B9 and derivative biosynthesis","type":"exact"},{"name":"vitamin B9 and derivative biosynthetic process","type":"exact"},{"name":"vitamin M and derivative biosynthesis","type":"exact"},{"name":"vitamin M and derivative biosynthetic process","type":"exact"}],"termid":"GO:0009396","terms_by_termid":{"GO:0006761":null,"GO:0009257":null,"GO:0009396":null,"GO:0046654":null,"GO:0046656":null,"GO:0046901":null}}


id: PBO:0061334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B12","termid":"PBO:0061334"}


id: GO:2000240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA export from nucleus","termid":"GO:0046833"},{"relation_name":"is_a","term_name":"positive regulation of ribonucleoprotein complex localization","termid":"GO:2000199"},{"relation_name":"is_a","term_name":"regulation of tRNA export from nucleus","termid":"GO:2000238"},{"relation_name":"positively_regulates","term_name":"tRNA export from nucleus","termid":"GO:0006409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tRNA export from nucleus","synonyms":[{"name":"positive regulation of tRNA export from cell nucleus","type":"exact"},{"name":"positive regulation of tRNA export out of nucleus","type":"exact"},{"name":"positive regulation of tRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of tRNA-nucleus export","type":"exact"}],"termid":"GO:2000240"}


id: PBO:0113159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog of nuclear distribution factor NudE; NUDEL; interacts with Pac1p and regulates dynein targeting to microtubule plus ends; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113159"}


id: PBO:0111808
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR family","termid":"PBO:0111808"}


id: PBO:0086065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that interacts with Msb2p; may play a role in activation of the filamentous growth pathway","termid":"PBO:0086065"}


id: PBO:0002626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-W","termid":"PBO:0002626"}


id: GO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cytoskeleton, a cellular scaffolding or skeleton that maintains cell shape, enables some cell motion (using structures such as flagella and cilia), and plays important roles in both intra-cellular transport (e.g. the movement of vesicles and organelles) and cellular division. Includes constituent parts of intermediate filaments, microfilaments, microtubules, and the microtrabecular lattice.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal part (obsolete GO:0044430)","secondary_identifiers":["NIF_Subcellular:sao1635329413"],"synonyms":[{"name":"cytoskeletal element","type":"exact"},{"name":"cytoskeleton component","type":"exact"}],"termid":"GO:0044430"}


id: GO:0061497
data:
  {"annotated_genes":["SJAG_03835","SJAG_02609","SJAG_05196","SJAG_01215","SJAG_07018","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97065,98908,104970,105734,106714,107572],"is_not":false,"summary":null,"term":"GO:0061497"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the inner plaque is in the nucleus.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner plaque of spindle pole body","termid":"GO:0005822"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02332":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_05196":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"inner plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061497","terms_by_termid":{"GO:0061497":null}}


id: GO:0010816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the peptide calcitonin.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"calcitonin catabolic process","termid":"GO:0010816"}


id: GO:0075215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"spore encystment","termid":"GO:0075214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of spore encystment on host","termid":"GO:0075215"}


id: PBO:0048115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2 pseudogene 3","termid":"PBO:0048115"}


id: GO:0099552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of lipid molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos","PMID:21531987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by lipid","termid":"GO:0099541"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by lipid, modulating synaptic transmission","termid":"GO:0099552"}


id: PBO:0072825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMM50 sorting and assembly machinery component pseudogene 1","termid":"PBO:0072825"}


id: GO:0160151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(32) in tRNA = pseudouridine(32) in tRNA.","definition_xrefs":["EC:5.4.99.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0016853","GO:0140101"],"is_obsolete":false,"name":"tRNA pseudouridine(32) synthase activity","secondary_identifiers":["RHEA:42544"],"termid":"GO:0160151"}


id: PBO:0075633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2C (pseudogene)","termid":"PBO:0075633"}


id: PBO:0057394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-2","termid":"PBO:0057394"}


id: PBO:0111923
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip3 subfamily","termid":"PBO:0111923"}


id: GO:0045605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"negative regulation of epidermis development","termid":"GO:0045683"},{"relation_name":"negatively_regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermal cell differentiation","synonyms":[{"name":"down regulation of epidermal cell differentiation","type":"exact"},{"name":"down-regulation of epidermal cell differentiation","type":"exact"},{"name":"downregulation of epidermal cell differentiation","type":"exact"},{"name":"inhibition of epidermal cell differentiation","type":"narrow"},{"name":"negative regulation of hypodermal cell differentiation","type":"related"}],"termid":"GO:0045605"}


id: GO:1903258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sorbose is transported from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","PMID:2878925","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose import across plasma membrane","termid":"GO:0140271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sorbose import across plasma membrane","synonyms":[{"name":"sorbose import into cell","type":"exact"}],"termid":"GO:1903258"}


id: PBO:0078178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-2P (non-functional)","termid":"PBO:0078178"}


id: GO:0022000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of the anterior neural ridge to the caudal region of the neural plate that specifies the forebrain fate.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain induction by the anterior neural ridge","termid":"GO:0022000"}


id: GO:0009671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nitrate(out) + H+(out) = nitrate(in) + H+(in).","definition_xrefs":["PMID:1990981","GOC:mah","PMID:10066586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"high-affinity secondary active nitrite transmembrane transporter activity","termid":"GO:0015513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nitrate:proton symporter activity","synonyms":[{"name":"nitrate(chlorate):hydrogen symporter activity","type":"exact"},{"name":"nitrate(chlorate):proton symporter activity","type":"exact"},{"name":"nitrate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0009671"}


id: PBO:0068498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 83, pseudogene","termid":"PBO:0068498"}


id: PBO:0027772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tingenone","termid":"PBO:0027772"}


id: MOD:00665
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to a methylated alanine, such as N-methylalanine, N,N-dimethylalanine, or N,N,N-trimethylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated alanine","synonyms":[{"name":"MeAla","type":"exact"}],"termid":"MOD:00665"}


id: GO:1902952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic spine maintenance.","definition_xrefs":["PMID:24328732","GO_REF:0000058","GOC:sjp","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"regulation of dendritic spine maintenance","termid":"GO:1902950"},{"relation_name":"positively_regulates","term_name":"dendritic spine maintenance","termid":"GO:0097062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic spine maintenance","synonyms":[{"name":"activation of dendritic spine maintenance","type":"narrow"},{"name":"up regulation of dendritic spine maintenance","type":"exact"},{"name":"up-regulation of dendritic spine maintenance","type":"exact"},{"name":"upregulation of dendritic spine maintenance","type":"exact"}],"termid":"GO:1902952"}


id: FYPO:0007660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population do not divide at a uniform size, although each cell divides to form equal-size daughter cells, which then subsequently divide at an abnormal size. Within one population, some cells may be larger and others smaller than normal (i.e. compared to wild-type cells under the same conditions) upon each division.","definition_xrefs":["PomBase:jh","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variable cell size at division","termid":"FYPO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"variable cell size at division with subsequent division at abnormal size","synonyms":[{"name":"increased variability of cell size in a vegetative population, with subsequent division at abnormal size","type":"exact"},{"name":"variable cell length at entry into mitosis followed by unequal cell division","type":"exact"},{"name":"variable cell size at division with abnormal cell size homeostasis","type":"exact"},{"name":"variable cell size at division with loss of cell size homeostasis","type":"exact"},{"name":"variable cell size at division with subsequent division at abnormal size during mitotic cell cycle","type":"related"},{"name":"variable cell size at division with subsequent division at abnormal size during vegetative growth","type":"exact"},{"name":"variable vegetative cell size at division with subsequent division at abnormal size","type":"exact"}],"termid":"FYPO:0007660"}


id: PBO:0046047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit E","termid":"PBO:0046047"}


id: PR:P17609
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt2 gene.","definition_xrefs":["UniProtKB:P17609","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.07c","synonyms":[{"name":"SEC4 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypt2","type":"exact"}],"termid":"PR:P17609"}


id: PBO:0084060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) for yeast Rab family members; involved in ER to Golgi trafficking; exhibits GAP activity toward Ypt1p that is stimulated by Gyl1p, also acts on Sec4p; interacts with Gyl1p, Rvs161p and Rvs167p; involved in recruiting Rvs167p to the bud tip during polarized growth; relocalizes from bud neck to cytoplasm upon DNA replication stress; GYP5 has a paralog, GYL1, that arose from the whole genome duplication","termid":"PBO:0084060"}


id: PR:Q9UU88
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylate kinase isoenzyme 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04983","PANTHER:PTHR12595:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase isoenzyme 6 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.11c","secondary_identifiers":["UniProtKB:Q9UU88"],"synonyms":[{"name":"AK/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AK6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AK6","type":"exact"},{"name":"dual activity adenylate kinase/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU88"}


id: GO:0007329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving pheromones that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter by pheromones (obsolete GO:0007329)","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter by pheromones","type":"narrow"},{"name":"positive regulation of transcription from Pol II promoter by pheromones","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter by pheromones","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"GO:0007329"}


id: PBO:0052161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 9","termid":"PBO:0052161"}


id: GO:0038071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein + ATP = protein phosphate + ADP by a mitogen-activated protein kinase, as part of a MAPK signaling cascade that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase activity involved in conjugation with cellular fusion (obsolete GO:0038071)","synonyms":[{"name":"MAPK activity involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0038071"}


id: PBO:0002984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease Isp5","termid":"PBO:0002984"}


id: GO:0005049
data:
  {"annotated_genes":["SJAG_03693","SJAG_01358","SJAG_04366","SJAG_01534","SJAG_02661"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87109,92570,104601,109690,113438],"is_not":false,"summary":null,"term":"GO:0005049"}]},"cv_name":"molecular_function","definition":"Combining with a nuclear export signal (NES) on a cargo to be transported, to mediate transport of a the cargo through the nuclear pore, from the nuclear lumen to the cytoplasm. The cargo can be either a RNA or a protein.","definition_xrefs":["PMID:28713609","GOC:vw","Wikipedia:Nuclear_transport","GOC:bf","GOC:pg","PMID:25802992","GOC:mah","PMID:11743003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic carrier activity","termid":"GO:0140142"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01358":null,"SJAG_01534":null,"SJAG_02661":null,"SJAG_03693":null,"SJAG_04366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140142"}],"interesting_parent_ids":["GO:0140142","GO:0003674","GO:0140104"],"is_obsolete":false,"name":"nuclear export signal receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-178215","GO:0008262"],"synonyms":[{"name":"NES receptor","type":"exact"},{"name":"exportin activity","type":"related"},{"name":"importin-alpha binding","type":"related"},{"name":"importin-alpha export receptor activity","type":"narrow"}],"termid":"GO:0005049","terms_by_termid":{"GO:0005049":null}}


id: GO:1900873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"pentadec-1-ene metabolic process","termid":"GO:1900872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentadec-1-ene biosynthetic process","synonyms":[{"name":"pentadec-1-ene anabolism","type":"exact"},{"name":"pentadec-1-ene biosynthesis","type":"exact"},{"name":"pentadec-1-ene formation","type":"exact"},{"name":"pentadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900873"}


id: GO:0014916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the force with which blood travels through the lungs. The process is controlled by a balance of processes that increase pressure and decrease pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung blood pressure","synonyms":[{"name":"regulation of pulmonary blood pressure","type":"exact"}],"termid":"GO:0014916"}


id: GO:0031231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the peroxisomal membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of peroxisomal membrane (obsolete GO:0031231)","synonyms":[{"name":"intrinsic to peroxisomal membrane","type":"narrow"}],"termid":"GO:0031231"}


id: FYPO:0007979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain interphase microtubule bundles with more microtubules than normal.","definition_xrefs":["PMID:15837798","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"increased number of microtubules per bundle during mitotic interphase","termid":"FYPO:0007979"}


id: PBO:0071188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 29","termid":"PBO:0071188"}


id: PBO:0073552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and multiple ankyrin repeat domains 3","termid":"PBO:0073552"}


id: GO:0070209
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that is part of the chromatin remodeling machinery; the acronym stands for ASsembly of Tel, Rvb and Atm-like kinase. In Saccharomyces cerevisiae this complex includes Rvb1p, Rvb2p, Tra1p, Tel2p, Asa1p, Ttilp and Tti2p.","definition_xrefs":["GOC:rb","PMID:19040720","PMID:22505622"],"gene_count":0,"genotype_count":0,"name":"obsolete ASTRA complex (obsolete GO:0070209)","termid":"GO:0070209"}


id: PBO:0030732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_nitrogen_starvation","termid":"PBO:0030732"}


id: FYECO:0000315
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115304],"is_not":false,"summary":null,"term":"FYECO:0000315"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Cells or samples were exposed to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"is_obsolete":false,"name":"UV","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"UV irradiation","type":"exact"},{"name":"ultraviolet light","type":"exact"}],"termid":"FYECO:0000315","terms_by_termid":{"FYECO:0000315":null}}


id: GO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) -> ADP + phosphate + Na+(out), by a rotational mechanism.","definition_xrefs":["PMID:30791207","RHEA:58157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium-transporting ATPase activity, rotational mechanism","secondary_identifiers":["EC:7.2.2.1","MetaCyc:3.6.3.15-RXN","RHEA:58156"],"synonyms":[{"name":"ATP phosphohydrolase (Na+-transporting) activity","type":"related"},{"name":"ATP synthase, sodium ion specific activity","type":"related"},{"name":"Na(+)-translocating ATPase activity","type":"broad"},{"name":"Na(+)-transporting two-sector ATPase activity","type":"related"},{"name":"Na+-translocating ATPase activity","type":"related"},{"name":"Na+-translocating F1Fo-ATPase","type":"narrow"},{"name":"Na+-transporting two-sector ATPase","type":"narrow"},{"name":"sodium transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"sodium-translocating F-type ATPase activity","type":"narrow"},{"name":"sodium-translocating V-type ATPase activity","type":"narrow"},{"name":"sodium-transporting two-sector ATPase activity","type":"narrow"},{"name":"vacuolar-type Na+-ATPase","type":"narrow"},{"name":"vacuolar-type Na+-translocating ATPase","type":"narrow"}],"termid":"GO:0046962"}


id: GO:0060898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neurectodermal cells to cells of the eye field and their capacity to differentiate into eye field cells. Eye field cells are neurectodermal cells that will form the optic placode.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"part_of","term_name":"lens placode formation involved in camera-type eye formation","termid":"GO:0046619"},{"relation_name":"part_of","term_name":"neural plate regionalization","termid":"GO:0060897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye field cell fate commitment involved in camera-type eye formation","termid":"GO:0060898"}


id: PBO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacyl-tRNA hydrolase (predicted)","termid":"PBO:0001559"}


id: GO:0008776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetate = ADP + acetyl phosphate.","definition_xrefs":["EC:2.7.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"acetate kinase activity","secondary_identifiers":["MetaCyc:ACETATEKIN-RXN","RHEA:11352"],"synonyms":[{"name":"AK activity","type":"related"},{"name":"ATP:acetate phosphotransferase activity","type":"related"},{"name":"AckA","type":"related"},{"name":"acetate kinase (phosphorylating) activity","type":"related"},{"name":"acetic kinase activity","type":"related"},{"name":"acetokinase activity","type":"related"}],"termid":"GO:0008776"}


id: GO:0031347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response","termid":"GO:0031347"}


id: PBO:0076093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stum, mechanosensory transduction mediator homolog","termid":"PBO:0076093"}


id: PBO:0030107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_citrulline_level","termid":"PBO:0030107"}


id: PR:O94502
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 41 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03222","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C12D12.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.05c","secondary_identifiers":["UniProtKB:O94502"],"synonyms":[{"name":"Spom972h-SLC25A41","type":"exact"}],"termid":"PR:O94502"}


id: PBO:0113364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that facilitates co-transcriptional histone H2B ubiquitination; scaffold protein that promotes oligomerization of E3 ligase Bre1p; contains an intrinsically disordered region that phase separates, to form a core encapsulated by Bre1p that recruits Ub-conjugating enzyme Rad6p, elevating catalytic activity along gene bodies; null mutant forms abnormally large cells, and homozygous null mutant displays delayed premeiotic DNA synthesis and reduced efficiency of meiotic nuclear division","termid":"PBO:0113364"}


id: PBO:0042756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 19","termid":"PBO:0042756"}


id: PBO:0065777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamylated RFamide peptide receptor","termid":"PBO:0065777"}


id: GO:2000644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"regulation of receptor catabolic process","synonyms":[{"name":"regulation of receptor breakdown","type":"exact"},{"name":"regulation of receptor catabolism","type":"exact"},{"name":"regulation of receptor degradation","type":"exact"}],"termid":"GO:2000644"}


id: GO:0070859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of bile acid biosynthetic process","termid":"GO:0070857"},{"relation_name":"is_a","term_name":"positive regulation of bile acid metabolic process","termid":"GO:1904253"},{"relation_name":"positively_regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"positive regulation of bile acid biosynthetic process","synonyms":[{"name":"activation of bile acid biosynthetic process","type":"narrow"},{"name":"positive regulation of bile acid anabolism","type":"exact"},{"name":"positive regulation of bile acid biosynthesis","type":"exact"},{"name":"positive regulation of bile acid formation","type":"exact"},{"name":"positive regulation of bile acid synthesis","type":"exact"},{"name":"stimulation of bile acid biosynthetic process","type":"narrow"},{"name":"up regulation of bile acid biosynthetic process","type":"exact"},{"name":"up-regulation of bile acid biosynthetic process","type":"exact"},{"name":"upregulation of bile acid biosynthetic process","type":"exact"}],"termid":"GO:0070859"}


id: CHEBI:168396
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycophenolic acid","termid":"CHEBI:168396"}


id: PBO:0067674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 856, pseudogene","termid":"PBO:0067674"}


id: PBO:0052017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 7","termid":"PBO:0052017"}


id: GO:0046344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"},{"relation_name":"is_a","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"ecdysteroid catabolic process","synonyms":[{"name":"ecdysteroid breakdown","type":"exact"},{"name":"ecdysteroid catabolism","type":"exact"},{"name":"ecdysteroid degradation","type":"exact"}],"termid":"GO:0046344"}


id: PBO:0054977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2391","termid":"PBO:0054977"}


id: PBO:0079810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glycosyltransferase family 3 member A2","termid":"PBO:0079810"}


id: GO:1901230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:1901230)","synonyms":[{"name":"down regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"down regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"down-regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"down-regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"downregulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"downregulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"inhibition of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"narrow"},{"name":"inhibition of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"narrow"},{"name":"negative regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"negative regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"negative regulation of non-canonical Wnt-activated signaling pathway via JNK cascade","type":"related"}],"termid":"GO:1901230"}


id: GO:0015488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucuronide(out) + monovalent cation(out) = glucuronide(in) + monovalent cation(in).","definition_xrefs":["TC:2.A.2.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronoside transmembrane transporter activity","termid":"GO:0015164"},{"relation_name":"is_a","term_name":"glycoside-pentoside-hexuronide:cation symporter activity","termid":"GO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glucuronide:cation symporter activity","synonyms":[{"name":"glucuronide:monovalent cation symporter activity","type":"exact"},{"name":"glucuronoside permease activity","type":"related"}],"termid":"GO:0015488"}


id: FYPO:0001449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular trehalose level","synonyms":[{"name":"normal cellular trehalose accumulation","type":"related"},{"name":"normal cellular trehalose level during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during vegetative growth","type":"exact"}],"termid":"FYPO:0001449"}


id: PBO:0004013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIb related protein (predicted)","termid":"PBO:0004013"}


id: GO:0042982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving amyloid precursor protein (APP), the precursor of amyloid-beta, a glycoprotein associated with Alzheimer's disease.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid precursor protein metabolic process","synonyms":[{"name":"APP metabolic process","type":"exact"},{"name":"APP metabolism","type":"exact"},{"name":"amyloid precursor protein metabolism","type":"exact"}],"termid":"GO:0042982"}


id: PBO:0050380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 4","termid":"PBO:0050380"}


id: GO:1905240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in osteoblast differentiation.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph","GOC:TermGenie","PMID:19342382"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:1905240)","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down regulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down-regulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down-regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"downregulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"downregulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"inhibition of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"inhibition of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:1905240"}


id: FYPO:0001405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A colony morphology phenotype in which a colony growing on a solid surface has an abnormally glossy surface.","definition_xrefs":["PomBase:mp","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal colony morphology","termid":"FYPO:0000150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"glossy colony morphology","synonyms":[{"name":"smooth colony morphology","type":"related"}],"termid":"FYPO:0001405"}


id: FYPO:0007214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more heterochromatin islands is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to chromatin at heterochromatin island","synonyms":[{"name":"abolished protein localisation to chromatin at heterochromatin island during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at heterochromatin island abolished","type":"exact"}],"termid":"FYPO:0007214"}


id: GO:0010570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which a multicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"regulates","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth","termid":"GO:0010570"}


id: PBO:0110321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 1 (ABCC1 blood group)","termid":"PBO:0110321"}


id: PBO:0066039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 8","termid":"PBO:0066039"}


id: PBO:0026989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_membrane_potential","termid":"PBO:0026989"}


id: PBO:0044357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 44","termid":"PBO:0044357"}


id: _global:ends_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_during","secondary_identifiers":["RO:0002093"],"termid":"_global:ends_during"}


id: GO:1902436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of male mating behavior.","definition_xrefs":["GOC:TermGenie","PMID:24089208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"regulation of male mating behavior","termid":"GO:1902435"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of male mating behavior","synonyms":[{"name":"down regulation of male mating behavior","type":"exact"},{"name":"down-regulation of male mating behavior","type":"exact"},{"name":"downregulation of male mating behavior","type":"exact"},{"name":"inhibition of male mating behavior","type":"narrow"}],"termid":"GO:1902436"}


id: PBO:0057826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3145","termid":"PBO:0057826"}


id: FYPO:0004987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sunitinib. Cells stop growing (and may die) at a concentration of sunitinib that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to sunitinib","synonyms":[{"name":"hypersensitive to sunitinib","type":"exact"},{"name":"sensitive to sunitinib during mitotic cell cycle","type":"related"},{"name":"sensitive to sunitinib during vegetative growth","type":"exact"}],"termid":"FYPO:0004987"}


id: PBO:0078684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (TTT) 17-1","termid":"PBO:0078684"}


id: PBO:0049603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 6","termid":"PBO:0049603"}


id: GO:0010068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the epidermis.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoderm histogenesis","termid":"GO:0010068"}


id: PBO:0068946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 190, pseudogene","termid":"PBO:0068946"}


id: GO:0008188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neuropeptide to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neuropeptide receptor activity","termid":"GO:0008188"}


id: PBO:0049927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocyte growth factor-regulated tyrosine kinase substrate","termid":"PBO:0049927"}


id: PBO:0075170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide E","termid":"PBO:0075170"}


id: GO:0043395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heparan sulfate proteoglycan, any proteoglycan containing heparan sulfate as the glycosaminoglycan carbohydrate unit.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"heparan sulfate proteoglycan binding","synonyms":[{"name":"heparin proteoglycan binding","type":"related"}],"termid":"GO:0043395"}


id: PBO:0080017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 3","termid":"PBO:0080017"}


id: PBO:0111946
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XP-C family","termid":"PBO:0111946"}


id: GO:1990937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of one or more acetyl groups to a xylan molecule.","definition_xrefs":["PMID:26745802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"},{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"xylan acetylation","termid":"GO:1990937"}


id: FYPO:0007871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the lateral cortex of a cell is decreased, and some of the protein is detected distributed throughout the cell cortex. There may be little or no protein detected at the medial cortex.","definition_xrefs":["PomBase:mah","PMID:34533984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to lateral cell cortex, with protein distributed in cell cortex, during vegetative growth","synonyms":[{"name":"decreased protein localisation to lateral cell cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell side, with protein distributed in cell cortex, during vegetative growth","type":"related"},{"name":"decreased protein localization to lateral cell cortex, with protein distributed in cell cortex, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to lateral cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"reduced protein localization to lateral cell cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"}],"termid":"FYPO:0007871"}


id: PBO:0016101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD synthetase Nad1 (predicted)","termid":"PBO:0016101"}


id: GO:1900388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of vesicle-mediated transport.","definition_xrefs":["GOC:TermGenie","PMID:18622392","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900388)","synonyms":[{"name":"regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900388"}


id: PBO:0052808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 74","termid":"PBO:0052808"}


id: GO:1901389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transforming growth factor beta activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta activation (obsolete GO:1901389)","synonyms":[{"name":"down regulation of L-TGF-beta activation","type":"exact"},{"name":"down regulation of TGF-B activation","type":"exact"},{"name":"down regulation of TGF-beta activation","type":"exact"},{"name":"down regulation of TGFB activation","type":"exact"},{"name":"down regulation of TGFbeta activation","type":"exact"},{"name":"down regulation of latent TGF-beta activation","type":"exact"},{"name":"down regulation of transforming growth factor beta activation","type":"exact"},{"name":"down-regulation of L-TGF-beta activation","type":"exact"},{"name":"down-regulation of TGF-B activation","type":"exact"},{"name":"down-regulation of TGF-beta activation","type":"exact"},{"name":"down-regulation of TGFB activation","type":"exact"},{"name":"down-regulation of TGFbeta activation","type":"exact"},{"name":"down-regulation of latent TGF-beta activation","type":"exact"},{"name":"down-regulation of transforming growth factor beta activation","type":"exact"},{"name":"downregulation of L-TGF-beta activation","type":"exact"},{"name":"downregulation of TGF-B activation","type":"exact"},{"name":"downregulation of TGF-beta activation","type":"exact"},{"name":"downregulation of TGFB activation","type":"exact"},{"name":"downregulation of TGFbeta activation","type":"exact"},{"name":"downregulation of latent TGF-beta activation","type":"exact"},{"name":"downregulation of transforming growth factor beta activation","type":"exact"},{"name":"inhibition of L-TGF-beta activation","type":"exact"},{"name":"inhibition of TGF-B activation","type":"exact"},{"name":"inhibition of TGF-beta activation","type":"exact"},{"name":"inhibition of TGFB activation","type":"exact"},{"name":"inhibition of TGFbeta activation","type":"exact"},{"name":"inhibition of latent TGF-beta activation","type":"exact"},{"name":"inhibition of transforming growth factor beta activation","type":"narrow"},{"name":"negative regulation of L-TGF-beta activation","type":"exact"},{"name":"negative regulation of TGF-B activation","type":"exact"},{"name":"negative regulation of TGF-beta activation","type":"exact"},{"name":"negative regulation of TGFB activation","type":"exact"},{"name":"negative regulation of TGFbeta activation","type":"exact"},{"name":"negative regulation of latent TGF-beta activation","type":"exact"}],"termid":"GO:1901389"}


id: GO:0099593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of an endocytosed synaptic vesicle with an endosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle to endosome fusion","termid":"GO:0016189"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"endocytosed synaptic vesicle to endosome fusion","termid":"GO:0099593"}


id: FYPO:0005391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of DNA recombination is increased during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased DNA recombination during cellular response to ionizing radiation","synonyms":[{"name":"increased DNA recombination during cellular response to IR","type":"exact"},{"name":"increased DNA recombination during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased DNA recombination during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased DNA recombination frequency during cellular response to ionizing radiation","type":"related"},{"name":"increased DNA recombination rate during cellular response to ionizing radiation during vegetative growth","type":"related"},{"name":"increased recombination during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005391"}


id: PBO:0083244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; extensively overlaps essential SMD1 gene encoding a U6 snRNP protein","termid":"PBO:0083244"}


id: MOD:00597
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 277 redundant with Unimod 39. Remap to MOD:00110.","definition_xrefs":["Unimod:277"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00597 methyl methanethiosulfonate (obsolete MOD:00597)","termid":"MOD:00597"}


id: PBO:0047175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 8","termid":"PBO:0047175"}


id: PBO:0036554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant C2 domain protein, human FAM102A and FAM102B ortholog","termid":"PBO:0036554"}


id: GO:2000280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of root development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of root development","termid":"GO:2000280"}


id: PBO:0053230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing G protein-coupled receptor 6","termid":"PBO:0053230"}


id: PBO:0074031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 18 pseudogene 1","termid":"PBO:0074031"}


id: GO:0043002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transport of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Golgi to plasma membrane CFTR protein transport (obsolete GO:0043002)","synonyms":[{"name":"down regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"down-regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"downregulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"inhibition of Golgi to plasma membrane CFTR protein transport","type":"narrow"}],"termid":"GO:0043002"}


id: PR:Q9UT20
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-oxo-5-alpha-steroid 4-dehydrogenase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00594","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.08c","secondary_identifiers":["UniProtKB:Q9UT20"],"synonyms":[{"name":"Spom972h-SRD5A1","type":"exact"}],"termid":"PR:Q9UT20"}


id: PBO:0000903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine diphosphokinase Tnr3","termid":"PBO:0000903"}


id: GO:0102282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(1-) + a sphinganine = 3-dehydrosphinganinium(1+) + NADH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-ketodihydrosphinganine (C18) reductase activity (obsolete GO:0102282)","termid":"GO:0102282"}


id: GO:2001027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell chemotaxis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell migration","termid":"GO:0010596"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis","termid":"GO:2001026"},{"relation_name":"negatively_regulates","term_name":"endothelial cell chemotaxis","termid":"GO:0035767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell chemotaxis","termid":"GO:2001027"}


id: SO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DsrA RNA regulates both transcription, by overcoming transcriptional silencing by the nucleoid-associated H-NS protein, and translation, by promoting efficient translation of the stress sigma factor, RpoS. These two activities of DsrA can be separated by mutation: the first of three stem-loops of the 85 nucleotide RNA is necessary for RpoS translation but not for anti-H-NS action, while the second stem-loop is essential for antisilencing and less critical for RpoS translation. The third stem-loop, which behaves as a transcription terminator, can be substituted by the trp transcription terminator without loss of either DsrA function. The sequence of the first stem-loop of DsrA is complementary with the upstream leader portion of RpoS messenger RNA, suggesting that pairing of DsrA with the RpoS message might be important for translational regulation.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DsrA_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/DsrA_RNA"],"synonyms":[{"name":"DsrA RNA","type":"exact"}],"termid":"SO:0000378"}


id: PBO:0050441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein M pseudogene 2","termid":"PBO:0050441"}


id: FYPO:0007797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan 1,3-alpha-glucosidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glucan 1,3-alpha-glucosidase activity","termid":"FYPO:0007796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased glucan 1,3-alpha-glucosidase activity","synonyms":[{"name":"reduced glucan 1,3-alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0007797"}


id: PBO:0004645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb2","termid":"PBO:0004645"}


id: GO:1901353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylglycerol biosynthetic process.","definition_xrefs":["PMID:12869188","GOC:TermGenie","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"regulation of phosphatidylglycerol biosynthetic process","termid":"GO:1901351"},{"relation_name":"positively_regulates","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylglycerol biosynthetic process","synonyms":[{"name":"activation of phosphatidylglycerol anabolism","type":"narrow"},{"name":"activation of phosphatidylglycerol biosynthesis","type":"narrow"},{"name":"activation of phosphatidylglycerol biosynthetic process","type":"narrow"},{"name":"activation of phosphatidylglycerol formation","type":"narrow"},{"name":"activation of phosphatidylglycerol synthesis","type":"narrow"},{"name":"positive regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"positive regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidylglycerol formation","type":"exact"},{"name":"positive regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"up regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"up regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"up regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidylglycerol formation","type":"exact"},{"name":"up regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"up-regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"up-regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidylglycerol formation","type":"exact"},{"name":"up-regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"upregulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"upregulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"upregulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidylglycerol formation","type":"exact"},{"name":"upregulation of phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:1901353"}


id: RO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between a neuron that is synapsed_to another neuron or a neuron that is connected indirectly to another by a chain of neurons, each synapsed_to the next.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_neural_circuit_with","termid":"RO:0000300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_in_neural_circuit_with","termid":"RO:0000302"}


id: PBO:0082211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,6-mannosyltransferase localized to the ER; responsible for addition of alpha-1,6 mannose to dolichol-linked Man7GlcNAc2; acts in the dolichol pathway for N-glycosylation; human homolog ALG12 complements yeast null mutant","termid":"PBO:0082211"}


id: PBO:0045420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox","termid":"PBO:0045420"}


id: GO:1903844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to transforming growth factor beta stimulus.","definition_xrefs":["GO_REF:0000058","GOC:rph","GOC:BHF_miRNA","GOC:BHF","PMID:22269326","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"cellular response to transforming growth factor beta stimulus","termid":"GO:0071560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to transforming growth factor beta stimulus","synonyms":[{"name":"regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"regulation of cellular response to TGFbeta stimulus","type":"exact"}],"termid":"GO:1903844"}


id: PBO:0041716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calneuron 1","termid":"PBO:0041716"}


id: PBO:0081775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705C, pseudogene","termid":"PBO:0081775"}


id: PBO:0029403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_latrunculin_B","termid":"PBO:0029403"}


id: PBO:0068208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 515","termid":"PBO:0068208"}


id: PBO:0078096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 4","termid":"PBO:0078096"}


id: GO:0050306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 sucrose = D-glucose + 1F-beta-D-fructosylsucrose.","definition_xrefs":["MetaCyc:SUCROSE-1F-FRUCTOSYLTRANSFERASE-RXN","EC:2.4.1.99"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"sucrose 1F-fructosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-1781","RHEA:23312"],"synonyms":[{"name":"SST activity","type":"related"},{"name":"sucrose 1(F)-fructosyltransferase activity","type":"related"},{"name":"sucrose-sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1'-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1(F)-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1F-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose fructosyltransferase activity","type":"related"}],"termid":"GO:0050306"}


id: PBO:0070305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 11","termid":"PBO:0070305"}


id: GO:0098773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skin epidermis over time, from its formation to the mature structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermis development","termid":"GO:0008544"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skin epidermis development","termid":"GO:0098773"}


id: GO:0008261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with allatostatin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"allatostatin receptor activity","termid":"GO:0008261"}


id: PBO:0076522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 33","termid":"PBO:0076522"}


id: PBO:0064027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 61","termid":"PBO:0064027"}


id: PBO:0034299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bounds_sequence_of","termid":"PBO:0034299"}


id: GO:1900082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of arginine catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of amine catabolic process","termid":"GO:0033242"},{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of arginine catabolic process","termid":"GO:1900081"},{"relation_name":"negatively_regulates","term_name":"arginine catabolic process","termid":"GO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"negative regulation of arginine catabolic process","synonyms":[{"name":"down regulation of arginine breakdown","type":"exact"},{"name":"down regulation of arginine catabolic process","type":"exact"},{"name":"down regulation of arginine catabolism","type":"exact"},{"name":"down regulation of arginine degradation","type":"exact"},{"name":"down-regulation of arginine breakdown","type":"exact"},{"name":"down-regulation of arginine catabolic process","type":"exact"},{"name":"down-regulation of arginine catabolism","type":"exact"},{"name":"down-regulation of arginine degradation","type":"exact"},{"name":"downregulation of arginine breakdown","type":"exact"},{"name":"downregulation of arginine catabolic process","type":"exact"},{"name":"downregulation of arginine catabolism","type":"exact"},{"name":"downregulation of arginine degradation","type":"exact"},{"name":"inhibition of arginine breakdown","type":"narrow"},{"name":"inhibition of arginine catabolic process","type":"narrow"},{"name":"inhibition of arginine catabolism","type":"narrow"},{"name":"inhibition of arginine degradation","type":"narrow"},{"name":"negative regulation of arginine breakdown","type":"exact"},{"name":"negative regulation of arginine catabolism","type":"exact"},{"name":"negative regulation of arginine degradation","type":"exact"}],"termid":"GO:1900082"}


id: GO:0051178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle process in which chromosome structure is altered from the condensed form held during meiosis to the relaxed dispersed form held in resting cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete meiotic chromosome decondensation (obsolete GO:0051178)","termid":"GO:0051178"}


id: PBO:0108978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 3","termid":"PBO:0108978"}


id: FYPO:0005157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype characterized by normal ascus morphology, i.e. the size, shape, and structure of the ascus are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal ascus morphology","termid":"FYPO:0005157"}


id: PBO:0077915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 6","termid":"PBO:0077915"}


id: PBO:0054444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1841","termid":"PBO:0054444"}


id: PBO:0024824
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ath1 complex protein","termid":"PBO:0024824"}


id: GO:0046694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the use of stored sperm from the first-mating male is inhibited by the seminal fluid of subsequently mating males.","definition_xrefs":["PMID:10440373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm competition","termid":"GO:0046692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm incapacitation","termid":"GO:0046694"}


id: GO:0090700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a plant organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["PMID:9090883","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"plant organ development","termid":"GO:0099402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of plant organ identity","termid":"GO:0090700"}


id: PBO:0029147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_methylenetetrahydrofolate_reductase_(NADPH)_activity","termid":"PBO:0029147"}


id: PBO:0058994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein MLX","termid":"PBO:0058994"}


id: PBO:0088432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex associated ATPase Bud32","termid":"PBO:0088432"}


id: FYPO:0000369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells do not contain vacuoles.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"vacuoles absent","synonyms":[{"name":"absent vacuolar morphology","type":"exact"},{"name":"vacuolar morphology: absent","type":"related"},{"name":"vacuoles absent during mitotic cell cycle","type":"related"},{"name":"vacuoles absent during vegetative growth","type":"exact"}],"termid":"FYPO:0000369"}


id: FYPO:0001731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular glutamate level","termid":"FYPO:0001568"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased vacuolar glutamate level","synonyms":[{"name":"increased level of glutamate in vacuole","type":"exact"},{"name":"increased vacuolar L-glutamate level","type":"exact"},{"name":"increased vacuolar glutamate level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar glutamate level during vegetative growth","type":"exact"},{"name":"increased vacuolar glutamic acid level","type":"related"}],"termid":"FYPO:0001731"}


id: PBO:0029600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium:hydrogen_antiporter_activity","termid":"PBO:0029600"}


id: PBO:0067780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 80","termid":"PBO:0067780"}


id: PR:Q9Y7M7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family B member 10, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03018","PRO:DNx","PANTHER:PTHR24221:SF76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent permease MDL1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.09c","secondary_identifiers":["UniProtKB:Q9Y7M7"],"synonyms":[{"name":"ABC transporter mdl1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ABCB10","type":"exact"}],"termid":"PR:Q9Y7M7"}


id: GO:0035819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the amount of sodium excreted in urine over a unit of time, as a result of pressure natriuresis.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pressure natriuresis","termid":"GO:0003095"},{"relation_name":"is_a","term_name":"positive regulation of renal sodium excretion","termid":"GO:0035815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of renal sodium excretion by pressure natriuresis","synonyms":[{"name":"natriuresis resulting from pressure natriuresis","type":"related"}],"termid":"GO:0035819"}


id: FYECO:0000248
data:
  {"alleles_by_uniquename":{"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115393,115571],"is_not":false,"summary":null,"term":"FYECO:0000248"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which latrunculin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02592":null},"genotype_count":1,"genotypes_by_uniquename":{"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"+ latA","references_by_uniquename":{"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta"],"synonyms":[{"name":"+ latrunculin A","type":"related"}],"termid":"FYECO:0000248","terms_by_termid":{"FYECO:0000248":null,"FYPO_EXT:0000001":null}}


id: PBO:0082807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of UDP-GlcNAc transferase; required for second step of dolichyl-linked oligosaccharide synthesis; anchors catalytic subunit Alg13p to ER membrane; similar to bacterial and human glycosyltransferases; both human homologs ALG13 and ALG14 are required to complement yeast alg14 mutant; mutations of human ALG14 cause congenital myasthenic syndrome","termid":"PBO:0082807"}


id: PBO:0056133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme like 2","termid":"PBO:0056133"}


id: PBO:0069696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 975, pseudogene","termid":"PBO:0069696"}


id: GO:1904507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomere maintenance in response to DNA damage.","definition_xrefs":["GO_REF:0000058","GOC:BHF_telomere","GOC:BHF","GOC:nc","GOC:TermGenie","PMID:22579284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance in response to DNA damage","termid":"GO:1904505"},{"relation_name":"positively_regulates","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"positive regulation of telomere maintenance in response to DNA damage","synonyms":[{"name":"activation of DNA damage response, telomere maintenance","type":"narrow"},{"name":"activation of telomere maintenance in response to DNA damage","type":"narrow"},{"name":"positive regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"up-regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up-regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"upregulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"upregulation of telomere maintenance in response to DNA damage","type":"exact"}],"termid":"GO:1904507"}


id: PBO:0015229
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complement S. cerevisiae CET1 when coexpressed with pombe ceg1","termid":"PBO:0015229"}


id: MOD:01255
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to S-(2-sulfanylethyl)cysteine.","definition_xrefs":["PubMed:11507762","Unimod:200#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,2-ethanedithiol modified residue","termid":"MOD:00553"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-sulfanylethyl)cysteine (Ser)","synonyms":[{"name":"EDT","type":"related"},{"name":"Ethanedithiol","type":"related"},{"name":"S-(2-mercaptoethyl)cysteine","type":"exact"}],"termid":"MOD:01255"}


id: GO:0047889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + H2O + 2 oxidized ferredoxin = nitrate + 2 reduced ferredoxin.","definition_xrefs":["RHEA:21828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase activity","termid":"GO:0008940"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulfur protein as acceptor","termid":"GO:0016664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ferredoxin-nitrate reductase activity","secondary_identifiers":["MetaCyc:1.7.7.2-RXN","EC:1.7.7.2"],"synonyms":[{"name":"assimilatory ferredoxin-nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"broad"},{"name":"nitrate (ferredoxin) reductase activity","type":"related"},{"name":"nitrite:ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0047889"}


id: GO:0098633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a collagen fibril.","definition_xrefs":["PMID:21421911","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix binding","termid":"GO:0050840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"collagen fibril binding","termid":"GO:0098633"}


id: GO:1902346
data:
  {"annotated_genes":["SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96729],"is_not":false,"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"Any meiotic strand displacement that is involved in double-strand break repair via synthesis-dependent strand annealing (SDSA).","definition_xrefs":["GOC:TermGenie","GOC:al","PMID:22723423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand displacement","termid":"GO:0000714"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0007049","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"meiotic strand displacement involved in double-strand break repair via SDSA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic D-loop dissociation involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic D-loop dissociation involved in mitotic gene conversion","type":"related"},{"name":"meiotic D-loop processing involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic D-loop processing involved in mitotic gene conversion","type":"related"},{"name":"meiotic displacement loop dissociation involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic displacement loop dissociation involved in mitotic gene conversion","type":"related"},{"name":"meiotic displacement loop processing involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic displacement loop processing involved in mitotic gene conversion","type":"related"},{"name":"meiotic strand displacement involved in SDSA","type":"broad"},{"name":"meiotic strand displacement involved in double-strand break repair via synthesis-dependent strand annealing","type":"exact"},{"name":"meiotic strand displacement involved in mitotic gene conversion","type":"related"}],"termid":"GO:1902346","terms_by_termid":{"GO:1902346":null}}


id: PBO:0089358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone p-factor receptor Mam2","termid":"PBO:0089358"}


id: PBO:0090015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase Plb2","termid":"PBO:0090015"}


id: GO:0060042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the retina is generated and organized.","definition_xrefs":["GOC:dph","GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina morphogenesis in camera-type eye","synonyms":[{"name":"retina morphogenesis in camera-style eye","type":"exact"},{"name":"retinogenesis","type":"exact"}],"termid":"GO:0060042"}


id: PBO:0054908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2322","termid":"PBO:0054908"}


id: GO:0034126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of MyD88-dependent toll-like receptor signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor signaling pathway","termid":"GO:0034123"},{"relation_name":"is_a","term_name":"regulation of MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0034124"},{"relation_name":"positively_regulates","term_name":"MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0002755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of MyD88-dependent toll-like receptor signaling pathway","synonyms":[{"name":"positive regulation of MyD88-dependent TLR signaling pathway","type":"exact"},{"name":"positive regulation of MyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034126"}


id: GO:1905689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of diacylglycerol kinase activity.","definition_xrefs":["GO_REF:0000059","GOC:bc","GOC:PARL","GOC:TermGenie","PMID:23091060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid kinase activity","termid":"GO:0090218"},{"relation_name":"is_a","term_name":"regulation of diacylglycerol kinase activity","termid":"GO:1905687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of diacylglycerol kinase activity","synonyms":[{"name":"activation of 1,2-diacylglycerol kinase (phosphorylating)","type":"narrow"},{"name":"activation of 1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"activation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"activation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"activation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"activation of DG kinase activity","type":"narrow"},{"name":"activation of DGK activity","type":"narrow"},{"name":"activation of arachidonoyl-specific diacylglycerol kinase activity","type":"narrow"},{"name":"activation of diacylglycerol kinase activity","type":"narrow"},{"name":"activation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"activation of diglyceride kinase activity","type":"narrow"},{"name":"activation of sn-1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"positive regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"positive regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"positive regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"positive regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"positive regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"positive regulation of DG kinase activity","type":"exact"},{"name":"positive regulation of DGK activity","type":"exact"},{"name":"positive regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"positive regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"positive regulation of diglyceride kinase activity","type":"exact"},{"name":"positive regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"up regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"up regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"up regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"up regulation of DG kinase activity","type":"exact"},{"name":"up regulation of DGK activity","type":"exact"},{"name":"up regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"up regulation of diglyceride kinase activity","type":"exact"},{"name":"up regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"up-regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"up-regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"up-regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"up-regulation of DG kinase activity","type":"exact"},{"name":"up-regulation of DGK activity","type":"exact"},{"name":"up-regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"up-regulation of diglyceride kinase activity","type":"exact"},{"name":"up-regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"upregulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"upregulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"upregulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"upregulation of DG kinase activity","type":"exact"},{"name":"upregulation of DGK activity","type":"exact"},{"name":"upregulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"upregulation of diglyceride kinase activity","type":"exact"},{"name":"upregulation of sn-1,2-diacylglycerol kinase activity","type":"exact"}],"termid":"GO:1905689"}


id: PBO:0018173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase Cca2 (predicted)","termid":"PBO:0018173"}


id: PBO:0081663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 585B","termid":"PBO:0081663"}


id: GO:0032515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of a phosphoprotein phosphatase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphoprotein phosphatase activity (obsolete GO:0032515)","synonyms":[{"name":"down regulation of calcineurin activity","type":"narrow"},{"name":"down regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"down regulation of protein phosphatase 2 activity","type":"related"},{"name":"down regulation of protein phosphatase 3 activity","type":"related"},{"name":"down regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"down regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"down-regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"down-regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"down-regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"downregulation of calcineurin activity","type":"narrow"},{"name":"downregulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"downregulation of protein phosphatase 2 activity","type":"related"},{"name":"downregulation of protein phosphatase 3 activity","type":"related"},{"name":"downregulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"downregulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"inhibition of calcineurin activity","type":"narrow"},{"name":"inhibition of phosphoprotein phosphatase activity","type":"narrow"},{"name":"inhibition of protein phosphatase 2 activity","type":"related"},{"name":"inhibition of protein phosphatase 3 activity","type":"related"},{"name":"inhibition of protein phosphatase type 2A activity","type":"narrow"},{"name":"inhibition of protein phosphatase type 2B activity","type":"narrow"},{"name":"negative regulation of calcineurin activity","type":"narrow"},{"name":"negative regulation of protein phosphatase 2 activity","type":"related"},{"name":"negative regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"negative regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"regulation of protein phosphatase 3 activity","type":"related"}],"termid":"GO:0032515"}


id: PBO:0043995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSGALNACT2 pseudogene 2","termid":"PBO:0043995"}


id: PR:O59773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vid21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein vid21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.08c","synonyms":[{"name":"Spom972h-vid21","type":"exact"},{"name":"esa1-associated factor vid21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar import and degradation protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59773"}


id: PBO:0071168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 7","termid":"PBO:0071168"}


id: PBO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.2.5","termid":"PBO:0001583"}


id: PBO:0062720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily R member 1 pseudogene","termid":"PBO:0062720"}


id: PBO:0047701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMC1-LUC7L2 readthrough","termid":"PBO:0047701"}


id: PBO:0041294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 2","termid":"PBO:0041294"}


id: PBO:0072289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 7","termid":"PBO:0072289"}


id: GO:0070940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing a phosphate group from an amino acid residue in the C-terminal domain of RNA polymerase II. Some dephosphorylation occurs during transcription while some may occur after the enzyme is released from the template in order to prepare it for the beginning of the transcription cycle again. RNA polymerase II with little or no phosphorylation is referred to as the hypophosphorylated or II(A) form.","definition_xrefs":["PMID:17079683","GOC:krc","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete dephosphorylation of RNA polymerase II C-terminal domain (obsolete GO:0070940)","synonyms":[{"name":"CTD domain dephosphorylation of RNA polymerase II","type":"exact"},{"name":"generation of II(A) form of RNA polymerase II","type":"exact"},{"name":"generation of hypophosphorylated CTD of RNA polymerase II","type":"exact"}],"termid":"GO:0070940"}


id: PBO:0002246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase (predicted)","termid":"PBO:0002246"}


id: PBO:0036093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K12_acetylation_during_vegetative_growth","termid":"PBO:0036093"}


id: SO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (or regions) that includes all of the sequence elements necessary to encode a functional transcript. A gene may include regulatory regions, transcribed regions and/or other functional sequence regions.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"member_of","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Gene"],"synonyms":[{"name":"INSDC_feature:gene","type":"exact"}],"termid":"SO:0000704"}


id: PBO:0059479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microseminoprotein, prostate associated","termid":"PBO:0059479"}


id: PBO:0053673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 856","termid":"PBO:0053673"}


id: GO:0033079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an immature T cell population by cell division.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature T cell proliferation","termid":"GO:0033079"}


id: GO:0030864
data:
  {"annotated_genes":["SJAG_04375","SJAG_02075","SJAG_03465","SJAG_00185","SJAG_00700","SJAG_02431","SJAG_03596","SJAG_02737","SJAG_03145","SJAG_01665","SJAG_03375","SJAG_01787","SJAG_00663","SJAG_04001","SJAG_03681","SJAG_02320","SJAG_03011","SJAG_03455","SJAG_04886","SJAG_03625","SJAG_00082","SJAG_02838","SJAG_03703","SJAG_00970","SJAG_04498","SJAG_00152","SJAG_00677","SJAG_04887","SJAG_01143","SJAG_04509","SJAG_02266","SJAG_03379","SJAG_02392","SJAG_01268","SJAG_02282","SJAG_04517","SJAG_00845","SJAG_02228","SJAG_01114","SJAG_03146","SJAG_03086","SJAG_01894","SJAG_04479","SJAG_00920","SJAG_01748","SJAG_05285","SJAG_02169","SJAG_02864","SJAG_03025","SJAG_04597","SJAG_00279","SJAG_02177","SJAG_04621","SJAG_03887","SJAG_02202","SJAG_02700","SJAG_01889","SJAG_02566","SJAG_04052","SJAG_00907","SJAG_01993","SJAG_01732","SJAG_03088","SJAG_02511","SJAG_00521","SJAG_04982","SJAG_04724","SJAG_04077","SJAG_04461","SJAG_01964","SJAG_03564","SJAG_04703","SJAG_00807","SJAG_04100","SJAG_00229","SJAG_03631","SJAG_00649","SJAG_01384","SJAG_00228","SJAG_00268","SJAG_04644","SJAG_04465","SJAG_03119","SJAG_02245","SJAG_03380","SJAG_03581","SJAG_02278","SJAG_02831","SJAG_03704","SJAG_03044","SJAG_00938","SJAG_03374","SJAG_01277","SJAG_04624","SJAG_00750"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85396],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030478"},{"annotations":[107158,90930,112335,115027,109054,105185,95392,103004,102133,103280,104123,101250,108335,99348,86899,101464,108309,89686,108011,97799,98836,93985,111035,93785,95938,99410,88554,103154,89857,84181,85851,106824,90832,98606,84286,94904,99166,104865,110472,107813,97829,91326,94965,88596,86698,114662,101268,95757,97031,97001,102964],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030479"},{"annotations":[115306,115644,115305,98512,115756,115308,115309,115307],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005826"},{"annotations":[90619,102315,86016,106895,90445,114809,88559,97345,97352,85843,88344,101468,111979,91333,96781,113207,93713,92378,83921,112063,97014,114052,115632,115761,90978,109509,106935,89861,108450,99808,115006,115635,86796,115630,88604,84307,115639,85358,115637,86749,103008,103162,113818,93266,98516,114070,94098,104260,94364],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110085"},{"annotations":[101255,114053,105191,96782,96612],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[109510,114054,114071,90979,108451,106936,99809,102316,84308,97015,86017,91897,105192,86797,92379,93267,90446],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[100033,114055,98517,88345,96193,113113,113208,94099,104261,88605,105193,93714,97042,93966,103163],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"}]},"cv_name":"cellular_component","definition":"The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton","termid":"GO:0030863"},{"relation_name":"part_of","term_name":"actin 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actin cytoskeleton","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:27734801":null,"PMID:28655757":null,"PMID:36148799":null},"termid":"GO:0030864","terms_by_termid":{"GO:0005826":null,"GO:0030478":null,"GO:0030479":null,"GO:0110085":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null}}


id: PBO:0049836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDLBP antisense RNA 1","termid":"PBO:0049836"}


id: PBO:0091634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm3","termid":"PBO:0091634"}


id: MOD:00380
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["Unimod:424#D","PubMed:12910261","PubMed:14725769","RESID:AA0375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin guanine dinucleotide","termid":"MOD:01167"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-aspartyl-molybdenum","type":"exact"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"},{"name":"nitrate reductase A aspartyl Mo-bisMGD cofactor","type":"exact"},{"name":"phosphoric acid 4-(2-amino-4-oxo-3,4,5,6,-tetrahydro-pteridin-6-yl)-2-hydroxy-3,4-dimercapto-but-3-en-yl ester guanylate ester","type":"exact"}],"termid":"MOD:00380"}


id: GO:0047766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-carbamoyl-L-serine + H2O + H+ = CO2 + 2 NH4 + pyruvate.","definition_xrefs":["RHEA:15445","EC:4.3.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"carbamoyl-serine ammonia-lyase activity","secondary_identifiers":["MetaCyc:CARBAMOYL-SERINE-AMMONIA-LYASE-RXN","KEGG_REACTION:R00213"],"synonyms":[{"name":"O-carbamoyl-L-serine ammonia-lyase (decarboxylating; pyruvate-forming)","type":"related"},{"name":"O-carbamoyl-L-serine ammonia-lyase (pyruvate-forming)","type":"related"},{"name":"O-carbamoyl-L-serine deaminase activity","type":"related"},{"name":"carbamoylserine deaminase activity","type":"related"}],"termid":"GO:0047766"}


id: GO:0060330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a response to type II interferon (interferon-gamma). Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"response to type II interferon","termid":"GO:0034341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to type II interferon","synonyms":[{"name":"regulation of response to gamma-interferon","type":"related"},{"name":"regulation of response to immune interferon","type":"exact"},{"name":"regulation of response to interferon-gamma","type":"broad"},{"name":"regulation of response to type II IFN","type":"exact"}],"termid":"GO:0060330"}


id: PBO:0072091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 22","termid":"PBO:0072091"}


id: PBO:0050218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 35","termid":"PBO:0050218"}


id: PBO:0069669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 946, pseudogene","termid":"PBO:0069669"}


id: PBO:0060179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 3","termid":"PBO:0060179"}


id: GO:0019684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The light reactions of photosynthesis, which take place in photosystems II and I. Light energy is harvested and used to power the transfer of electrons among a series of electron donors and acceptors. The final electron acceptor is NADP+, which is reduced to NADPH. NADPH generated from light reactions is used in sugar synthesis in dark reactions. Light reactions also generate a proton motive force across the thylakoid membrane, and the proton gradient is used to synthesize ATP. There are two chemical reactions involved in the light reactions: water oxidation in photosystem II, and NADP reduction in photosystem I.","definition_xrefs":["PMID:15746074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"part_of","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthesis, light reaction","secondary_identifiers":["Wikipedia:Photolysis#Photolysis_in_photosynthesis","MetaCyc:PWY-101"],"synonyms":[{"name":"photolysis","type":"related"}],"termid":"GO:0019684"}


id: SO:0000707
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 5' five prime splice site region of the donor RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_site","termid":"SO:0001420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_donor_site","synonyms":[{"name":"5 prime trans splice site","type":"related"},{"name":"trans splice donor site","type":"exact"},{"name":"trans-splice donor site","type":"exact"}],"termid":"SO:0000707"}


id: PBO:0027887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_monomethylation","termid":"PBO:0027887"}


id: PBO:0074861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 47","termid":"PBO:0074861"}


id: PBO:0079819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UL16 binding protein 1","termid":"PBO:0079819"}


id: GO:0035188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The emergence of an immature organism from a protective structure.","definition_xrefs":["GOC:dgh","ISBN:0198612001","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organism emergence from protective structure","termid":"GO:0071684"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hatching","termid":"GO:0035188"}


id: PBO:0072444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 8","termid":"PBO:0072444"}


id: GO:0061412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of amino acids.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation (obsolete GO:0061412)","termid":"GO:0061412"}


id: PBO:0030141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_GTP_binding","termid":"PBO:0030141"}


id: PBO:0031200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_occurrence_of_normal_mitotic_cell_cycle_arrest","termid":"PBO:0031200"}


id: GO:0120119
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of cytoskeletal and membranous connections responsible for the lateral attachment of the cilium to the cell body in some trypanosomatid species.","definition_xrefs":["PMID:25972344","PMID:26746239","PMID:16414276","PMID:17945531","PMID:20541452","PMID:2606941","PMID:26776656","PMID:10361731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anchoring junction","termid":"GO:0070161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"flagellum attachment zone","synonyms":[{"name":"FAZ","type":"related"}],"termid":"GO:0120119"}


id: GO:0000035
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94343],"is_not":false,"summary":null,"term":"GO:0000035"}]},"cv_name":"molecular_function","definition":"Binding to an acyl group, any group formally derived by removal of the hydroxyl group from the acid function of a carboxylic acid.","definition_xrefs":["ISBN:0198506732","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"acyl binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acyl-CoA or acyl binding","type":"broad"}],"termid":"GO:0000035","terms_by_termid":{"GO:0000035":null}}


id: PBO:0089685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box protein","termid":"PBO:0089685"}


id: GO:0099035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of spine apparatus membrane (obsolete GO:0099035)","termid":"GO:0099035"}


id: MOD:01621
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two or more amino acid residues by forming an adduct with a compound containing a flavin group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"flavin modified residue","termid":"MOD:00697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin crosslinked residues","termid":"MOD:01621"}


id: PBO:0013064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ergothioneine biosynthesis protein Egt2","termid":"PBO:0013064"}


id: GO:0051875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a pigment granule is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"part_of","term_name":"cellular pigmentation","termid":"GO:0033059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pigment granule localization","synonyms":[{"name":"pigment granule localisation","type":"exact"}],"termid":"GO:0051875"}


id: GO:0051974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of the enzyme telomerase, which catalyzes of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of telomerase activity (obsolete GO:0051974)","synonyms":[{"name":"down regulation of telomerase activity","type":"exact"},{"name":"down-regulation of telomerase activity","type":"exact"},{"name":"downregulation of telomerase activity","type":"exact"},{"name":"inhibition of telomerase activity","type":"narrow"},{"name":"telomerase inhibitor","type":"related"}],"termid":"GO:0051974"}


id: GO:0047578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-L-glutamate + 2-oxoglutarate = 4-hydroxy-2-oxoglutarate + L-glutamate.","definition_xrefs":["EC:2.6.1.23","MetaCyc:4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxyglutamate transaminase activity","secondary_identifiers":["Reactome:R-HSA-6784393","RHEA:10480"],"synonyms":[{"name":"4-hydroxy-L-glutamate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"4-hydroxyglutamate aminotransferase activity","type":"exact"}],"termid":"GO:0047578"}


id: GO:1990973
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A linear array of nuclear envelope membrane proteins composed of nesprin-2G and SUN2, which couple the nucleus to moving actin cables, resulting in rearward nuclear transport (away from the leading edge).","definition_xrefs":["PMID:21173262","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"transmembrane actin-associated (TAN) line","synonyms":[{"name":"TAN line","type":"related"}],"termid":"GO:1990973"}


id: GO:1990764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of a myofibroblast.","definition_xrefs":["PMID:19239477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast contraction","synonyms":[{"name":"MF contraction","type":"exact"},{"name":"MFB contraction","type":"exact"}],"termid":"GO:1990764"}


id: GO:1901196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of calcium-mediated signaling that is involved in cellular response to salt stress.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"part_of","term_name":"cellular response to salt stress","termid":"GO:0071472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium-mediated signaling involved in cellular response to salt stress","synonyms":[{"name":"activation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"narrow"},{"name":"activation of calcium-mediated signaling involved in cellular response to salt stress","type":"narrow"},{"name":"activation of calcium-mediated signaling involved in cellular salinity response","type":"narrow"},{"name":"positive regulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"positive regulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"},{"name":"positive regulation of calcium-mediated signalling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"positive regulation of calcium-mediated signalling involved in cellular response to salt stress","type":"exact"},{"name":"positive regulation of calcium-mediated signalling involved in cellular salinity response","type":"exact"},{"name":"stimulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"narrow"},{"name":"stimulation of calcium-mediated signaling involved in cellular response to salt stress","type":"narrow"},{"name":"stimulation of calcium-mediated signaling involved in cellular salinity response","type":"narrow"},{"name":"up regulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"up regulation of calcium-mediated signaling involved in cellular response to salt stress","type":"exact"},{"name":"up regulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"},{"name":"up-regulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"up-regulation of calcium-mediated signaling involved in cellular response to salt stress","type":"exact"},{"name":"up-regulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"},{"name":"upregulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"upregulation of calcium-mediated signaling involved in cellular response to salt stress","type":"exact"},{"name":"upregulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"}],"termid":"GO:1901196"}


id: PBO:0111930
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZnF type","termid":"PBO:0111930"}


id: GO:1900910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of olefin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"positively_regulates","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of olefin metabolic process","synonyms":[{"name":"activation of olefin metabolic process","type":"narrow"},{"name":"activation of olefin metabolism","type":"narrow"},{"name":"positive regulation of olefin metabolism","type":"related"},{"name":"up regulation of olefin metabolic process","type":"exact"},{"name":"up regulation of olefin metabolism","type":"related"},{"name":"up-regulation of olefin metabolic process","type":"exact"},{"name":"up-regulation of olefin metabolism","type":"related"},{"name":"upregulation of olefin metabolic process","type":"exact"},{"name":"upregulation of olefin metabolism","type":"related"}],"termid":"GO:1900910"}


id: PBO:0052019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 8","termid":"PBO:0052019"}


id: PBO:0068583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 34, pseudogene","termid":"PBO:0068583"}


id: PBO:0065409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 7","termid":"PBO:0065409"}


id: PBO:0057692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1282","termid":"PBO:0057692"}


id: GO:0003111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine into the bloodstream increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by epinephrine","termid":"GO:0003065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by circulating epinephrine","synonyms":[{"name":"positive regulation of heart rate by circulating adrenaline","type":"exact"}],"termid":"GO:0003111"}


id: GO:0090152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the mitochondrial membrane that contributes to mitochondrial fission.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0007005","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrial membrane involved in mitochondrial fission","synonyms":[{"name":"establishment of protein localisation in mitochondrial membrane involved in mitochondrial fission","type":"exact"},{"name":"establishment of protein localization in mitochondrial membrane involved in mitochondrial fission","type":"exact"}],"termid":"GO:0090152"}


id: GO:0036289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own serine amino acid residues, or a serine residue on an identical protein.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine autophosphorylation","synonyms":[{"name":"serine autophosphorylation","type":"exact"}],"termid":"GO:0036289"}


id: PBO:0016567
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CLN3","termid":"PBO:0016567"}


id: PBO:0063373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate cytidylyltransferase 1A, choline","termid":"PBO:0063373"}


id: PBO:0027468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endocytosis","termid":"PBO:0027468"}


id: PBO:0047159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 186 member A","termid":"PBO:0047159"}


id: PBO:0005854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are2 (predicted)","termid":"PBO:0005854"}


id: GO:0035029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to leading edge cell fate during dorsal closure. Leading edge cells are the dorsal-most cells of the migrating epidermis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading edge cell fate commitment","termid":"GO:0035027"},{"relation_name":"part_of","term_name":"dorsal closure, leading edge cell differentiation","termid":"GO:0046663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, leading edge cell fate commitment","termid":"GO:0035029"}


id: PBO:0091980
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase Required for RNAi-mediated heterochromatin assembly","termid":"PBO:0091980"}


id: PBO:0089649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery monothiol glutaredoxin Grx3","termid":"PBO:0089649"}


id: PBO:0057548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR663A host gene","termid":"PBO:0057548"}


id: PBO:0056629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 9","termid":"PBO:0056629"}


id: GO:0043158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process by which a cell becomes a heterocyst, a cell that carries out nitrogen fixation. This process involves changes to the cell wall, expression of nitrogenase and other proteins involved in nitrogen fixation, and degradation of photosystem II, which produces oxygen. This process is known to occur in some cyanobacteria.","definition_xrefs":["PMID:35744626","PMID:11121783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heterocyst development","synonyms":[{"name":"heterocyst cell differentiation","type":"related"},{"name":"heterocyst differentiation","type":"related"},{"name":"heterocyst formation","type":"exact"}],"termid":"GO:0043158"}


id: GO:0032019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prominent mass in the cytoplasm of previtellogenic oocytes. The cloud contains both mitochondria and electron-dense granulofibrillar material (GFM) and is the source of germinal granule material.","definition_xrefs":["PMID:6541166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial cloud","synonyms":[{"name":"Balbiani body","type":"exact"},{"name":"mitochondrial aggregate","type":"related"}],"termid":"GO:0032019"}


id: PBO:0091210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large subunit ribosomal RNA","termid":"PBO:0091210"}


id: PBO:0043961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma F, pseudogene","termid":"PBO:0043961"}


id: PBO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expression of nus1 and rer2 functionally complements a triple deletion of NUS1, RER2 and SRT1 in S. cerevisiae","termid":"PBO:0016985"}


id: PBO:0088294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase, zeta catalytic subunit Rev3","termid":"PBO:0088294"}


id: GO:0030692
data:
  {"annotated_genes":["SJAG_03654","SJAG_00838"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99758,106230],"is_not":false,"summary":null,"term":"GO:0030692"}]},"cv_name":"cellular_component","definition":"A heterodimer associated with precursors of the eukaryotic small ribosomal subunit, including the 90S preribosome; involved in small subunit biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noc complex","termid":"GO:0030689"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"},{"relation_name":"part_of","term_name":"preribosome, small subunit precursor","termid":"GO:0030688"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00838":null,"SJAG_03654":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0030684"}],"interesting_parent_ids":["GO:0030684","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Noc4p-Nop14p complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Nop7 complex","type":"exact"},{"name":"Nop7 subcomplex","type":"exact"}],"termid":"GO:0030692","terms_by_termid":{"GO:0030692":null}}


id: GO:0016493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a C-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:signaling","PMID:8662823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor activity","termid":"GO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-C chemokine receptor activity","termid":"GO:0016493"}


id: PBO:0039218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member D1","termid":"PBO:0039218"}


id: GO:0016014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising alpha- and beta-dystrobrevin; forms part of the dystrophin glycoprotein complex.","definition_xrefs":["PMID:15117830","PMID:16710609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"dystrophin-associated glycoprotein complex","termid":"GO:0016010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"dystrobrevin complex","termid":"GO:0016014"}


id: GO:0015786
data:
  {"annotated_genes":["SJAG_04162","SJAG_04406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89136],"is_not":false,"summary":null,"term":"GO:0015786"},{"annotations":[108523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"}]},"cv_name":"biological_process","definition":"The process in which UDP-glucose is transported across a membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04162":null,"SJAG_04406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"UDP-glucose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015786","terms_by_termid":{"GO:0015786":null,"GO:0120112":null}}


id: PBO:0004485
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.10","termid":"PBO:0004485"}


id: GO:1901363
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id: GO:0070880
data:
  {"annotated_genes":["SJAG_03123","SJAG_01453","SJAG_00876","SJAG_04483","SJAG_00218","SJAG_01835","SJAG_04771","SJAG_01290","SJAG_04666","SJAG_02222","SJAG_03587","SJAG_05285","SJAG_01288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98740,104742],"is_not":false,"summary":null,"term":"GO:0070880"},{"annotations":[90504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[109319,87618,84103,87607,102216,111985,103905,105434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[83556,88443],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of fungal cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall beta-glucan biosynthetic process","termid":"GO:0034410"},{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide biosynthetic process","termid":"GO:0051278"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan metabolic process","termid":"GO:0070879"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall beta-glucan anabolism","type":"exact"},{"name":"fungal-type cell wall beta-glucan biosynthesis","type":"exact"},{"name":"fungal-type cell wall beta-glucan formation","type":"exact"},{"name":"fungal-type cell wall beta-glucan synthesis","type":"exact"}],"termid":"GO:0070880","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070880":null,"GO:0071970":null,"GO:0140748":null}}


id: GO:0150110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cholesterol esterification.","definition_xrefs":["PMID:21810484","PMID:24201375","GOC:bc","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cholesterol esterification (obsolete GO:0150110)","termid":"GO:0150110"}


id: PBO:0030026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_agglutination","termid":"PBO:0030026"}


id: _global:acts_upstream_of,_negative_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"acts_upstream_of_or_within,_negative_effect","termid":"_global:acts_upstream_of_or_within,_negative_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of,_negative_effect","secondary_identifiers":["RO:0004035"],"termid":"_global:acts_upstream_of,_negative_effect"}


id: PBO:0046082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 7","termid":"PBO:0046082"}


id: PBO:0055447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2878","termid":"PBO:0055447"}


id: PBO:0113191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major ADP/ATP carrier of the mitochondrial inner membrane; exchanges cytosolic ADP for mitochondrially synthesized ATP; also imports heme and ATP; also functions in peroxisomes; required for viability in many lab strains that carry a sal1 mutation; PET9 has a paralog, AAC3, that arose from the whole genome duplication; human homolog SLC25A4 implicated in progressive external ophthalmoplegia can complement yeast null mutant","termid":"PBO:0113191"}


id: PBO:0064961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 13","termid":"PBO:0064961"}


id: PBO:0065667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type O","termid":"PBO:0065667"}


id: PBO:0067494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 629, pseudogene","termid":"PBO:0067494"}


id: GO:0018241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O5 atom of peptidyl-hydroxylysine, forming O5-glycosyl-L-hydroxylysine; the most common form is galactosyl hydroxylysine.","definition_xrefs":["RESID:AA0153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked glycosylation via hydroxylysine","synonyms":[{"name":"protein amino acid O-linked glycosylation via hydroxylysine","type":"exact"}],"termid":"GO:0018241"}


id: PBO:0076754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 4","termid":"PBO:0076754"}


id: PBO:0060931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 2","termid":"PBO:0060931"}


id: PBO:0058273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-2","termid":"PBO:0058273"}


id: PBO:0076447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 3","termid":"PBO:0076447"}


id: SO:0000701
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where the validity of the base calling is questionable.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible_base_call_error","synonyms":[{"name":"possible base call error","type":"exact"}],"termid":"SO:0000701"}


id: PBO:0056803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 1 pseudogene 1","termid":"PBO:0056803"}


id: GO:2000978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of forebrain neuron differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of forebrain neuron differentiation","termid":"GO:2000977"},{"relation_name":"negatively_regulates","term_name":"forebrain neuron differentiation","termid":"GO:0021879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of forebrain neuron differentiation","termid":"GO:2000978"}


id: GO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the association between sister chromatids of a replicated chromosome along the length of the chromosome arms, is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a meiotic cell cycle.","definition_xrefs":["GOC:vw","PMID:1708436"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:0035876)","synonyms":[{"name":"maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:0035876"}


id: PBO:0030729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actomyosin_contractile_ring_absent","termid":"PBO:0030729"}


id: GO:0180043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of an inositol pyrophosphate.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140299","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"inositol pyrophosphate sensor activity","termid":"GO:0180043"}


id: GO:0006258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucose metabolic process","termid":"GO:0006011"},{"relation_name":"is_a","term_name":"nucleotide-sugar catabolic process","termid":"GO:0009227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"UDP-glucose catabolic process","secondary_identifiers":["GO:0019691"],"synonyms":[{"name":"UDP-glucose breakdown","type":"exact"},{"name":"UDP-glucose catabolism","type":"exact"},{"name":"UDP-glucose conversion","type":"related"},{"name":"UDP-glucose degradation","type":"exact"}],"termid":"GO:0006258"}


id: FYPO:0006809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which shortening of the poly(A) tail of a messenger RNA (mRNA) molecule is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA catabolic process during vegetative growth","termid":"FYPO:0002137"},{"relation_name":"is_a","term_name":"abnormal deadenylation-dependent decay","termid":"FYPO:0006808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"decreased nuclear-transcribed mRNA poly(A) tail shortening","synonyms":[{"name":"decreased nuclear-transcribed mRNA poly(A) tail shortening during mitotic cell cycle","type":"related"},{"name":"decreased nuclear-transcribed mRNA poly(A) tail shortening during vegetative growth","type":"exact"},{"name":"reduced nuclear-transcribed mRNA poly(A) tail shortening","type":"exact"}],"termid":"FYPO:0006809"}


id: PBO:0090134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4196 and DUF4211, human CCDC82 ortholog","termid":"PBO:0090134"}


id: PBO:0044658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 1","termid":"PBO:0044658"}


id: PBO:0061335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family, member B13","termid":"PBO:0061335"}


id: GO:0007119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Unlocalized bud growth such that the entire surface of the bud expands evenly, in a cell that reproduces by budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"budding cell bud growth","termid":"GO:0007117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell isotropic bud growth","synonyms":[{"name":"isotropic bud growth","type":"broad"}],"termid":"GO:0007119"}


id: PBO:0086565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR320W is not an essential gene","termid":"PBO:0086565"}


id: FYPO:0000434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which fermentation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal fermentation","synonyms":[{"name":"fermentative metabolism: normal","type":"related"},{"name":"normal fermentation during mitotic cell cycle","type":"related"},{"name":"normal fermentation during vegetative growth","type":"exact"},{"name":"normal fermentative metabolism","type":"exact"}],"termid":"FYPO:0000434"}


id: PBO:0080343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 107 pseudogene","termid":"PBO:0080343"}


id: PBO:0090581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome assembly protein Eis1","termid":"PBO:0090581"}


id: GO:0032941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a substance by a tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"secretion by tissue","synonyms":[{"name":"expulsion of gland contents","type":"related"},{"name":"tissue secretion","type":"exact"}],"termid":"GO:0032941"}


id: PBO:0062301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 12 pseudogene","termid":"PBO:0062301"}


id: PBO:0030832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_during_iron_starvation","termid":"PBO:0030832"}


id: PR:O60084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit TIM44 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03175","PANTHER:PTHR10721:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim44 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.02","secondary_identifiers":["UniProtKB:O60084"],"synonyms":[{"name":"Spom972h-TIMM44","type":"exact"}],"termid":"PR:O60084"}


id: MOD:00963
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from DeltaMass. OBSOLETE because redundant and identical to MOD:00462. Remap to MOD:00462.","definition_xrefs":["DeltaMass:357"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00963 Oxidation of Trp to kynurenine (obsolete MOD:00963)","termid":"MOD:00963"}


id: PBO:0040352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 1","termid":"PBO:0040352"}


id: GO:0050013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydropantoate = 3-methyl-2-oxobutanoate + formaldehyde.","definition_xrefs":["MetaCyc:KETOPANTOALDOLASE-RXN","EC:4.1.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-dehydropantoate aldolase activity","secondary_identifiers":["RHEA:23276"],"synonyms":[{"name":"2-dehydropantoate formaldehyde-lyase (3-methyl-2-oxobutanoate-forming)","type":"related"},{"name":"2-dehydropantoate formaldehyde-lyase activity","type":"related"},{"name":"ketopantoaldolase activity","type":"exact"}],"termid":"GO:0050013"}


id: GO:0004698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Calcium-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction is activated in the presence of diacylglycerol and calcium.","definition_xrefs":["PMID:34834162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diacylglycerol-dependent serine/threonine kinase activity","termid":"GO:0004697"},{"relation_name":"is_a","term_name":"calcium-dependent protein serine/threonine kinase activity","termid":"GO:0009931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004672","GO:0003824","GO:0016301","GO:0016740","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"calcium,diacylglycerol-dependent serine/threonine kinase activity","secondary_identifiers":["Reactome:R-HSA-9005561","Reactome:R-HSA-114683","EC:2.7.11.13","Reactome:R-HSA-416639","Reactome:R-HSA-8986937","Reactome:R-HSA-114684","Reactome:R-HSA-421007"],"synonyms":[{"name":"calcium-dependent PKC activity","type":"exact"},{"name":"conventional protein kinase C activity","type":"exact"}],"termid":"GO:0004698"}


id: PBO:0041656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 2","termid":"PBO:0041656"}


id: GO:1901455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to toluene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to toluene","termid":"GO:1901454"},{"relation_name":"negatively_regulates","term_name":"response to toluene","termid":"GO:1901424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to toluene","synonyms":[{"name":"down regulation of response to toluene","type":"exact"},{"name":"down-regulation of response to toluene","type":"exact"},{"name":"downregulation of response to toluene","type":"exact"},{"name":"inhibition of response to toluene","type":"narrow"}],"termid":"GO:1901455"}


id: PR:O14235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pof5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.02c","synonyms":[{"name":"Spom972h-pof5","type":"exact"}],"termid":"PR:O14235"}


id: GO:0015393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil/uridine permease activity (obsolete GO:0015393)","synonyms":[{"name":"uracil/uridine permease activity","type":"exact"}],"termid":"GO:0015393"}


id: GO:0060760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of a response to cytokine stimulus.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"positively_regulates","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to cytokine stimulus","termid":"GO:0060760"}


id: FYPO:0007567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body that normally occurs in anaphase instead begins in metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:10775265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature protein localization to mitotic spindle pole body","termid":"FYPO:0006824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"premature protein localization to mitotic spindle pole body during metaphase","synonyms":[{"name":"advanced protein localization to mitotic spindle pole body during metaphase","type":"exact"},{"name":"premature protein localisation to mitotic spindle pole body during metaphase","type":"exact"},{"name":"premature protein localization to mitotic spindle pole body during metaphase during vegetative growth","type":"exact"},{"name":"premature protein localization to spindle pole body during metaphase of mitotic cell cycle","type":"exact"},{"name":"premature protein localization to spindle pole body during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007567"}


id: PR:O59721
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pus4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.10","synonyms":[{"name":"Spom972h-pus4","type":"exact"},{"name":"psi55 synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA pseudouridine(55) synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA pseudouridylate synthase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-uridine isomerase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59721"}


id: PBO:0015214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Fal1 (predicted)","termid":"PBO:0015214"}


id: GO:0010908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of heparan sulfate proteoglycan biosynthesis. Heparan sulfate proteoglycan biosynthetic processes are the chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating alpha-(1->4)-linked hexuronic acid and glucosamine residues.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"heparan sulfate proteoglycan biosynthetic process","termid":"GO:0015012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of heparan sulfate proteoglycan biosynthetic process","termid":"GO:0010908"}


id: PBO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M20 protein","termid":"PBO:0004987"}


id: GO:1901217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of holin activity.","definition_xrefs":["GOC:bm","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of holin activity (obsolete GO:1901217)","termid":"GO:1901217"}


id: GO:0070072
data:
  {"annotated_genes":["SJAG_00301","SJAG_04454","SJAG_05306","SJAG_00771","SJAG_06514","SJAG_01939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98073,106300,109274,110351,112722,114494],"is_not":false,"summary":null,"term":"GO:0070072"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a vacuolar proton-transporting V-type ATPase complex, proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across the vacuolar membrane.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase complex assembly","termid":"GO:0070070"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_00771":null,"SJAG_01939":null,"SJAG_04454":null,"SJAG_05306":null,"SJAG_06514":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"V-ATPase assembly","type":"broad"},{"name":"V-ATPase complex assembly","type":"broad"}],"termid":"GO:0070072","terms_by_termid":{"GO:0070072":null}}


id: GO:1905795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a puromycin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:25736288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to puromycin","termid":"GO:1905794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to puromycin","synonyms":[{"name":"cellular response to 3'-deoxy-N,N-dimethyl-3'-(O-methyl-L-tyrosinamido)adenosine","type":"exact"}],"termid":"GO:1905795"}


id: SO:0001251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An STS map is a physical map organized by the unique STS landmarks.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"STS","termid":"SO:0000331"},{"relation_name":"is_a","term_name":"fragment_assembly","termid":"SO:0001249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STS_map","synonyms":[{"name":"STS map","type":"exact"}],"termid":"SO:0001251"}


id: PR:000027600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3, initiator methionine removed unphosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:P10651-1, 2-136.","definition_xrefs":["PMID:11242054","PMID:20929775","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/PhosRes-","type":"exact"}],"termid":"PR:000027600"}


id: PBO:0086222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap190p; SAP185 has a paralog, SAP190, that arose from the whole genome duplication","termid":"PBO:0086222"}


id: GO:0034927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyrene + O2 + 2 H+ + 2 e- = pyrene-1,2-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrene 1,2-monooxygenase activity (obsolete GO:0034927)","termid":"GO:0034927"}


id: PBO:0043664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q8A","termid":"PBO:0043664"}


id: PBO:0061296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptides B and W receptor 1","termid":"PBO:0061296"}


id: PBO:0005110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit (predicted)","termid":"PBO:0005110"}


id: PBO:0081997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 30","termid":"PBO:0081997"}


id: PBO:0003551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein But2","termid":"PBO:0003551"}


id: SO:0001827
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequencer read of an mRNA substrate.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_read","synonyms":[{"name":"mRNA read","type":"exact"}],"termid":"SO:0001827"}


id: GO:0034101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process of regulating the production and elimination of erythrocytes within an organism.","definition_xrefs":["PMID:10694114","GOC:add","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte homeostasis","synonyms":[{"name":"RBC homeostasis","type":"exact"},{"name":"red blood cell homeostasis","type":"exact"}],"termid":"GO:0034101"}


id: PBO:0068858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 98, pseudogene","termid":"PBO:0068858"}


id: GO:0047060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantolactone + A = 2-dehydropantolactone + AH(2).","definition_xrefs":["EC:1.1.99.27","RHEA:21004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(R)-pantolactone dehydrogenase (flavin) activity","secondary_identifiers":["MetaCyc:1.1.99.27-RXN","KEGG_REACTION:R03156"],"synonyms":[{"name":"(R)-pantolactone:acceptor oxidoreductase (flavin-containing)","type":"related"},{"name":"(R)-pantoyllactone dehydrogenase (flavin) activity","type":"related"},{"name":"2-dehydropantolactone reductase (flavin) activity","type":"related"},{"name":"2-dehydropantoyl-lactone reductase (flavin) activity","type":"related"}],"termid":"GO:0047060"}


id: PBO:0082283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP4A phosphorylase; bifunctional diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase and ADP sulfurylase involved in catabolism of bis(5'-nucleosidyl) tetraphosphates; catalyzes phosphorolysis of dinucleoside oligophosphates, cleaving substrates' alpha/beta-anhydride bond and introducing Pi into the beta-position of the corresponding NDP formed; protein abundance increases under DNA replication stress; APA1 has a paralog, APA2, that arose from the whole genome duplication","termid":"PBO:0082283"}


id: PBO:0110327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC13 pseudogene 1","termid":"PBO:0110327"}


id: PBO:0070531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 30","termid":"PBO:0070531"}


id: PBO:0047225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 228 member A","termid":"PBO:0047225"}


id: GO:1903460
data:
  {"annotated_genes":["SJAG_04877","SJAG_02908","SJAG_02182","SJAG_01010","SJAG_00729","SJAG_04190","SJAG_00814","SJAG_00863"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85608,90005,91285,91317,100343,101046,103107,103476],"is_not":false,"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any leading strand elongation that is involved in mitotic cell cycle DNA replication.","definition_xrefs":["PMID:1234","GO_REF:0000060","GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading strand elongation","termid":"GO:0006272"},{"relation_name":"is_a","term_name":"DNA strand elongation involved in mitotic DNA replication","termid":"GO:1902983"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02908":null,"SJAG_04190":null,"SJAG_04877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA replication leading strand elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"leading strand elongation involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"leading strand elongation involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"leading strand elongation involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"leading strand elongation involved in mitotic DNA replication","type":"exact"},{"name":"leading strand elongation involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"leading strand elongation involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903460","terms_by_termid":{"GO:1903460":null}}


id: PBO:0073849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A3 antisense RNA 1","termid":"PBO:0073849"}


id: PBO:0083270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 92% of ORF overlaps the uncharacterized ORF YGL068W; deletion in cyr1 mutant results in loss of stress resistance","termid":"PBO:0083270"}


id: PBO:0050017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DM beta","termid":"PBO:0050017"}


id: PBO:0031383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth","termid":"PBO:0031383"}


id: PBO:0062709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily H member 1","termid":"PBO:0062709"}


id: PBO:0039417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angel homolog 2","termid":"PBO:0039417"}


id: SO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which the T3 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T3_RNA_Polymerase_Promoter","synonyms":[{"name":"T3 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001206"}


id: PBO:0017683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transmembrane transporter, meiotic Mfc1","termid":"PBO:0017683"}


id: PBO:0065217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase 2","termid":"PBO:0065217"}


id: GO:1900373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of purine nucleotide biosynthetic processes.","definition_xrefs":["GOC:TermGenie","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide biosynthetic process","termid":"GO:0030810"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"positively_regulates","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"positive regulation of purine nucleotide biosynthetic process","synonyms":[{"name":"activation of purine nucleotide anabolism","type":"exact"},{"name":"activation of purine nucleotide biosynthesis","type":"exact"},{"name":"activation of purine nucleotide biosynthetic process","type":"narrow"},{"name":"activation of purine nucleotide formation","type":"exact"},{"name":"activation of purine nucleotide synthesis","type":"exact"},{"name":"positive regulation of purine nucleotide anabolism","type":"exact"},{"name":"positive regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"positive regulation of purine nucleotide formation","type":"exact"},{"name":"positive regulation of purine nucleotide synthesis","type":"exact"},{"name":"up regulation of purine nucleotide anabolism","type":"exact"},{"name":"up regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"up regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"up regulation of purine nucleotide formation","type":"exact"},{"name":"up regulation of purine nucleotide synthesis","type":"exact"},{"name":"up-regulation of purine nucleotide anabolism","type":"exact"},{"name":"up-regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"up-regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"up-regulation of purine nucleotide formation","type":"exact"},{"name":"up-regulation of purine nucleotide synthesis","type":"exact"},{"name":"upregulation of purine nucleotide anabolism","type":"exact"},{"name":"upregulation of purine nucleotide biosynthesis","type":"exact"},{"name":"upregulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"upregulation of purine nucleotide formation","type":"exact"},{"name":"upregulation of purine nucleotide synthesis","type":"exact"}],"termid":"GO:1900373"}


id: PBO:0002360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha mannosidase Mnl1 (predicted)","termid":"PBO:0002360"}


id: GO:1903944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatocyte apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:8649852","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hepatocyte apoptotic process","termid":"GO:1903943"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"negatively_regulates","term_name":"hepatocyte apoptotic process","termid":"GO:0097284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatocyte apoptotic process","synonyms":[{"name":"down regulation of hepatocyte apoptosis","type":"narrow"},{"name":"down regulation of hepatocyte apoptotic process","type":"exact"},{"name":"down-regulation of hepatocyte apoptosis","type":"narrow"},{"name":"down-regulation of hepatocyte apoptotic process","type":"exact"},{"name":"downregulation of hepatocyte apoptosis","type":"narrow"},{"name":"downregulation of hepatocyte apoptotic process","type":"exact"},{"name":"inhibition of hepatocyte apoptosis","type":"narrow"},{"name":"inhibition of hepatocyte apoptotic process","type":"narrow"},{"name":"negative regulation of hepatocyte apoptosis","type":"narrow"}],"termid":"GO:1903944"}


id: PBO:0012315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal family membrane transporter (predicted)","termid":"PBO:0012315"}


id: PBO:0031315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_valproic_acid","termid":"PBO:0031315"}


id: GO:0045445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into striated muscle fibers.","definition_xrefs":["GOC:go_curators","CL:0000056","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast differentiation","synonyms":[{"name":"myoblast cell differentiation","type":"exact"}],"termid":"GO:0045445"}


id: FYPO:0007174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is abnormal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during mitotic interphase","synonyms":[{"name":"abnormal protein localisation to kinetochore during interphase during vegetative growth","type":"exact"},{"name":"abnormal protein localization to kinetochore during interphase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0007174"}


id: PBO:0062973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPC4 antisense RNA 1","termid":"PBO:0062973"}


id: PBO:0067819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 121","termid":"PBO:0067819"}


id: GO:0042596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response of an organism to a perceived external threat.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal response to stress","termid":"GO:0033555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fear response","secondary_identifiers":["GO:0001663"],"synonyms":[{"name":"physiological fear response","type":"exact"}],"termid":"GO:0042596"}


id: FYPO:0001074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of myo-inositol into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal myo-inositol import","termid":"FYPO:0001073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased myo-inositol import","synonyms":[{"name":"decreased myo-inositol import across plasma membrane","type":"exact"},{"name":"decreased myo-inositol import during mitotic cell cycle","type":"related"},{"name":"decreased myo-inositol import during vegetative growth","type":"exact"},{"name":"decreased myo-inositol import into cell","type":"exact"},{"name":"decreased myo-inositol uptake","type":"exact"},{"name":"reduced myo-inositol import","type":"exact"}],"termid":"FYPO:0001074"}


id: GO:1901154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of paromomycin.","definition_xrefs":["UniPathway:UPA00970","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic catabolic process","termid":"GO:0030649"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"paromomycin metabolic process","termid":"GO:1901153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"paromomycin catabolic process","synonyms":[{"name":"paromomycin breakdown","type":"exact"},{"name":"paromomycin catabolism","type":"exact"},{"name":"paromomycin degradation","type":"exact"}],"termid":"GO:1901154"}


id: PBO:0084597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL021C was originally annotated as an independent ORF but due to a sequence change was merged with an adjacent ORF into a single reading frame, designated YJL020C/BBC1","termid":"PBO:0084597"}


id: PBO:0039941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 3B","termid":"PBO:0039941"}


id: PBO:0057854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3165","termid":"PBO:0057854"}


id: GO:0052694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: jasmonoyl-isoleucine + NADPH + H+ + O2 = 12-hydroxy-jasmonoyl-isoleucine + NADP+ + H2O.","definition_xrefs":["PMID:21576464","MetaCyc:RXN-12421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"jasmonoyl-isoleucine-12-hydroxylase activity","secondary_identifiers":["RHEA:54808"],"termid":"GO:0052694"}


id: PBO:0053044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 4","termid":"PBO:0053044"}


id: PBO:0083588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YGR051C is not an essential gene","termid":"PBO:0083588"}


id: PBO:0051580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor D","termid":"PBO:0051580"}


id: PBO:0069815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1101, pseudogene","termid":"PBO:0069815"}


id: PBO:0112612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN signalling serine/threonine protein kinase Cdc7","termid":"PBO:0112612"}


id: GO:1900911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of olefin biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olefin biosynthetic process","synonyms":[{"name":"regulation of olefin anabolism","type":"exact"},{"name":"regulation of olefin biosynthesis","type":"exact"},{"name":"regulation of olefin formation","type":"exact"},{"name":"regulation of olefin synthesis","type":"exact"}],"termid":"GO:1900911"}


id: PBO:0016951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug129","termid":"PBO:0016951"}


id: PR:P87240
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- not2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general negative regulator of transcription subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.15c","synonyms":[{"name":"Spom972h-not2","type":"exact"}],"termid":"PR:P87240"}


id: PBO:0053918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1215","termid":"PBO:0053918"}


id: PATO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular shape quality inhering in a bearer by virtue of the bearer's having two angles in its length giving the bearer the form of the letter W.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angular","termid":"PATO:0001977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"w-shaped","termid":"PATO:0002439"}


id: GO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex forming portion of the radial spoke that is orthogonal to the elongated stalk and which projects towards the central pair of microtubules within the ciliary or flagellum axoneme.","definition_xrefs":["GOC:krc","GOC:cilia","PMID:22754630","PMID:34871179","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"radial spoke head","synonyms":[{"name":"radial spokehead","type":"exact"}],"termid":"GO:0001535"}


id: PBO:0035702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4-K16_acetylation_during_vegetative_growth","termid":"PBO:0035702"}


id: GO:0061720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-) resulting in the formation of glycerone phosphate (DHAP) and 3-sulfolactaldehyde (SLA).","definition_xrefs":["GOC:dph","PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) catabolic process","termid":"GO:1902777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde","termid":"GO:0061720"}


id: PBO:0082349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; has strong preference for dsRNA; remodels RNA-protein complex (RNP) to facilitate efficient transcription termination ; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites","termid":"PBO:0082349"}


id: PR:P87060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pop1 gene.","definition_xrefs":["UniProtKB:P87060","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein pop1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.01","synonyms":[{"name":"Spom972h-pop1","type":"exact"},{"name":"WD repeat-containing protein ste16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87060"}


id: PBO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.17","termid":"PBO:0002459"}


id: GO:0000472
data:
  {"annotated_genes":["SJAG_04524","SJAG_02250","SJAG_00772","SJAG_04224"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95899,103749,105136,111359],"is_not":false,"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage between the 5'-External Transcribed Spacer (5'-ETS) and the 5' end of the SSU-rRNA of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00772":null,"SJAG_02250":null,"SJAG_04224":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endonucleolytic cleavage at A1","type":"narrow"}],"termid":"GO:0000472","terms_by_termid":{"GO:0000472":null}}


id: PBO:0050014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, B","termid":"PBO:0050014"}


id: PBO:0066964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 266","termid":"PBO:0066964"}


id: GO:0006260
data:
  {"annotated_genes":["SJAG_00623","SJAG_00874","SJAG_01010","SJAG_00272","SJAG_04995","SJAG_02465","SJAG_04855","SJAG_02439","SJAG_01572","SJAG_01374","SJAG_00863","SJAG_01044","SJAG_04210","SJAG_00727","SJAG_03957","SJAG_01267","SJAG_03720","SJAG_04971","SJAG_02627","SJAG_00364","SJAG_02908","SJAG_05239","SJAG_01832","SJAG_04816","SJAG_02079","SJAG_02039","SJAG_06022","SJAG_04341","SJAG_00247","SJAG_00536","SJAG_01354","SJAG_00399","SJAG_01410","SJAG_02162","SJAG_05301","SJAG_03728","SJAG_02299","SJAG_02948","SJAG_01644","SJAG_00729","SJAG_04150","SJAG_05237","SJAG_02667","SJAG_03160","SJAG_02074","SJAG_04877","SJAG_03438","SJAG_03843","SJAG_03927","SJAG_01884","SJAG_05372","SJAG_01823","SJAG_02348","SJAG_04272","SJAG_03780","SJAG_04671","SJAG_00177","SJAG_00728","SJAG_00400","SJAG_02658","SJAG_04183","SJAG_02198","SJAG_02800","SJAG_05197","SJAG_03097","SJAG_01677","SJAG_02199","SJAG_01624","SJAG_00073","SJAG_01221","SJAG_01762","SJAG_02822","SJAG_00696","SJAG_03495","SJAG_03840","SJAG_05193","SJAG_02690","SJAG_01185","SJAG_02182","SJAG_00857","SJAG_05012","SJAG_02294","SJAG_03898","SJAG_05232","SJAG_01210","SJAG_03997","SJAG_03525","SJAG_02172","SJAG_00198","SJAG_02698","SJAG_03855","SJAG_02098","SJAG_03451","SJAG_04879","SJAG_00884","SJAG_00573","SJAG_02992","SJAG_01076","SJAG_00311","SJAG_04994","SJAG_00814","SJAG_04190","SJAG_03722","SJAG_01068","SJAG_00935","SJAG_03695","SJAG_03048","SJAG_01648","SJAG_05180","SJAG_00618","SJAG_00327","SJAG_02394","SJAG_01698","SJAG_02607","SJAG_02724","SJAG_02818","SJAG_02610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59262,100740,105703],"is_not":false,"summary":null,"term":"GO:0006260"},{"annotations":[108887,93220],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902298"},{"annotations":[98369],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071946"},{"annotations":[103472,109720,111567,106077],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[103473,105241],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045004"},{"annotations":[93191,94189,105258],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043137"},{"annotations":[111686,113511,95496,112424,101446,61280],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006269"},{"annotations":[108424],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006271"},{"annotations":[109721,105242,103474,111438,85607,106080,90003,101043,103106,91100,100338,111265,111569,108664,109311,103371,91282,108425,91316,98929],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902983"},{"annotations":[93496],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006273"},{"annotations":[93497,106082],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006272"},{"annotations":[99425],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[94190],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070716"},{"annotations":[91802,112529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006264"},{"annotations":[108979,103963,112427,100538,85620,94191,102539,95361,107697,108051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902969"},{"annotations":[89015,108183,86470,108587,109639,107790,109333,104179,87983,111571,107529,109723,101447,93498,93393,113512,95504,103965,106358,108052,103373,99062,102540,89982,109312,95497,103475,106696,111267,111440,90593],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902975"},{"annotations":[100342,91284,105244,101045,114356,98931],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903459"},{"annotations":[90005,103107,103476,91285,91317,85608,100343,101046],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903460"},{"annotations":[105259,107907],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990505"},{"annotations":[86471,95505,106697],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902977"},{"annotations":[99427,111180,106698],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902985"},{"annotations":[86975,95025,92067,108667,105215,112981,92233,103885,85201,91115,103861,90867,95141,94325,105684],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990426"},{"annotations":[105021,113027],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903464"},{"annotations":[105022,93840,98464],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[93499,99063],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902315"},{"annotations":[96730,88584,96694,97586,88673,100268,91102],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"},{"annotations":[113451,108186,99428],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[102732,85093,98470,112406],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[98474],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903465"},{"annotations":[107699,106359,111268,91286,111442,103478,87984,111441,103374,93500,102541,100443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006279"},{"annotations":[95440],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903466"},{"annotations":[99332],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[100269,99053,108668,84341],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903469"},{"annotations":[102746,104645,98371],"is_not":false,"rel_names":["negatively_regulates","regulates","part_of"],"summary":null,"term":"GO:0043111"},{"annotations":[102747,99333,95441,104646],"is_not":false,"rel_names":["regulates","part_of","negatively_regulates"],"summary":null,"term":"GO:0011000"},{"annotations":[95442,111181,98372],"is_not":false,"rel_names":["regulates","negatively_regulates","part_of"],"summary":null,"term":"GO:0031582"},{"annotations":[95443],"is_not":false,"rel_names":["negatively_regulates","regulates","part_of"],"summary":null,"term":"GO:0090001"},{"annotations":[98373],"is_not":false,"rel_names":["negatively_regulates","regulates","part_of"],"summary":null,"term":"GO:0071807"},{"annotations":[85203,108669,92070,95455,101854,97257,102748,85630,100270,103886,104279,104647,93566,92234,86978,90652,95362,96733,97608,108670,95143,110441,112982,113284,113623,105217],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031297"},{"annotations":[108671,100271],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071932"},{"annotations":[94192],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990516"},{"annotations":[111182],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071170"},{"annotations":[89386],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"},{"annotations":[106098,110442,95027,112983,92752,87559,111678,92235,85631,85204,105686,95144],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120290"}]},"cv_name":"biological_process","definition":"The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by the origin recognition complex, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. 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