# terms

id: GO:2000862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estrogen secretion","termid":"GO:2000861"},{"relation_name":"negatively_regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of estrogen secretion","synonyms":[{"name":"negative regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000862"}


id: GO:0019761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside biosynthetic process","termid":"GO:0016144"},{"relation_name":"is_a","term_name":"glucosinolate metabolic process","termid":"GO:0019760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"glucosinolate biosynthetic process","synonyms":[{"name":"glucosinolate anabolism","type":"exact"},{"name":"glucosinolate biosynthesis","type":"exact"},{"name":"glucosinolate formation","type":"exact"},{"name":"glucosinolate synthesis","type":"exact"}],"termid":"GO:0019761"}


id: GO:0006240
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88460,91538,103386],"is_not":false,"summary":null,"term":"GO:0006240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dCDP, deoxycytidine 5'-diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009197"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dCDP metabolic process","termid":"GO:0046062"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dCDP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dCDP anabolism","type":"exact"},{"name":"dCDP biosynthesis","type":"exact"},{"name":"dCDP formation","type":"exact"},{"name":"dCDP synthesis","type":"exact"}],"termid":"GO:0006240","terms_by_termid":{"GO:0006240":null}}


id: PBO:0056108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA1 pseudogene 3","termid":"PBO:0056108"}


id: GO:0061364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The apoptotic process that contributes to luteolysis.","definition_xrefs":["GOC:mtg_apoptosis","PMID:18566128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"luteolysis","termid":"GO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in luteolysis","synonyms":[{"name":"apoptosis involved in luteolysis","type":"narrow"},{"name":"structural luteolysis","type":"exact"}],"termid":"GO:0061364"}


id: FYECO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which silver nanoparticles were added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PMID:29294138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ AgNP","synonyms":[{"name":"+ silver nanoparticles","type":"exact"}],"termid":"FYECO:0000353"}


id: PBO:0064760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase D","termid":"PBO:0064760"}


id: SO:0001241
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that has multiple possible transcription start sites.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_alternate_transcription_start_sites","synonyms":[{"name":"encodes alternate transcription start sites","type":"exact"}],"termid":"SO:0001241"}


id: GO:0004456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-D-gluconate = 2-dehydro-3-deoxy-6-phospho-D-gluconate + H2O.","definition_xrefs":["RHEA:17277","EC:4.2.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphogluconate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02036","MetaCyc:PGLUCONDEHYDRAT-RXN"],"synonyms":[{"name":"6-phospho-D-gluconate hydro-lyase (2-dehydro-3-deoxy-6-phospho-D-gluconate-forming)","type":"related"},{"name":"6-phospho-D-gluconate hydro-lyase activity","type":"related"},{"name":"6-phosphogluconate dehydrase activity","type":"related"},{"name":"6-phosphogluconate dehydratase activity","type":"related"},{"name":"6-phosphogluconic dehydrase activity","type":"related"},{"name":"gluconate 6-phosphate dehydratase activity","type":"related"},{"name":"gluconate-6-phosphate dehydratase activity","type":"related"}],"termid":"GO:0004456"}


id: PBO:0044731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 17","termid":"PBO:0044731"}


id: PBO:0081364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 200","termid":"PBO:0081364"}


id: PBO:0065934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 8","termid":"PBO:0065934"}


id: _global:directly_negatively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"_global:directly_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_negatively_regulated_by","secondary_identifiers":["RO:0002023"],"termid":"_global:directly_negatively_regulated_by"}


id: PBO:0060992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHERF family PDZ scaffold protein 4","termid":"PBO:0060992"}


id: GO:0061445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to an endocardial cushion cell fate and its capacity to differentiate into an endocardial cushion cell.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cell fate commitment","termid":"GO:0060957"},{"relation_name":"part_of","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion cell fate commitment","termid":"GO:0061445"}


id: PBO:0005905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase 2 (predicted)","termid":"PBO:0005905"}


id: PBO:0079326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 14","termid":"PBO:0079326"}


id: GO:1903662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-altrarate.","definition_xrefs":["PMID:17649980","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-altrarate metabolic process","synonyms":[{"name":"L-altrarate(1-) metabolism","type":"exact"}],"termid":"GO:1903662"}


id: PBO:0003685
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Up regulated During Septation","termid":"PBO:0003685"}


id: SO:0001619
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant of a non coding RNA gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_coding_transcript_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:ncRNA","type":"narrow"},{"name":"Jannovar:non_coding_transcript_variant","type":"exact"},{"name":"VEP:non_coding_transcript_variant","type":"exact"},{"name":"nc transcript variant","type":"exact"},{"name":"non coding transcript variant","type":"exact"},{"name":"within_non_coding_gene","type":"exact"}],"termid":"SO:0001619"}


id: GO:0098529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction that targets a skeletal muscle fiber.","definition_xrefs":["GOC:mtg_OBO2OWL_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction development","termid":"GO:0007528"},{"relation_name":"part_of","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular junction development, skeletal muscle fiber","termid":"GO:0098529"}


id: PR:Q9Y7U3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gep4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7U3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerophosphatase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.02","synonyms":[{"name":"PGP phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gep4","type":"exact"}],"termid":"PR:Q9Y7U3"}


id: GO:0106286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-caffeate + ATP + CoA = (E)-caffeoyl-CoA + AMP + diphosphate.","definition_xrefs":["RHEA:36299","PMID:22649270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"(E)-caffeate-CoA ligase activity","termid":"GO:0106286"}


id: PBO:0090444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small endoribonuclease with 2 transmembrane domains","termid":"PBO:0090444"}


id: FYPO:0008090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic anaphase begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of mitotic anaphase B","termid":"FYPO:0008090"}


id: GO:0006099
data:
  {"annotated_genes":["SJAG_01895","SJAG_03163","SJAG_02398","SJAG_01671","SJAG_01524","SJAG_03588","SJAG_00260","SJAG_02464","SJAG_06382","SJAG_03920","SJAG_01753","SJAG_04843","SJAG_01630","SJAG_01922","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69691,84850,85218,85947,90498,95545,102850,106264,108218,109353,109608,111129,111910,112729,112935],"is_not":false,"summary":null,"term":"GO:0006099"}]},"cv_name":"biological_process","definition":"A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary metabolic process","termid":"GO:0044238"},{"relation_name":"part_of","term_name":"aerobic respiration","termid":"GO:0009060"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01524":null,"SJAG_01630":null,"SJAG_01671":null,"SJAG_01753":null,"SJAG_01895":null,"SJAG_01922":null,"SJAG_02398":null,"SJAG_02464":null,"SJAG_03163":null,"SJAG_03588":null,"SJAG_03813":null,"SJAG_03920":null,"SJAG_04843":null,"SJAG_06382":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"tricarboxylic acid cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Tricarboxylic_acid_cycle"],"synonyms":[{"name":"Krebs cycle","type":"exact"},{"name":"TCA cycle","type":"exact"},{"name":"citric acid cycle","type":"exact"},{"name":"oxidative TCA cycle","type":"exact"}],"termid":"GO:0006099","terms_by_termid":{"GO:0006099":null}}


id: GO:1990273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which a 2,2,7-trimethylguanosine cap structure is added to the 5' end of an snRNA. The snRNA capping process includes the formation of 7-methyl-G caps found on all RNA polymerase II transcripts, followed by hypermethylation at the 2' position of the guanosine residue to convert a mono-methylated cap to a 2,2,7-trimethylguanosine cap structure. Note that the pol III transcribed U6 snRNA is also TMG capped.","definition_xrefs":["PMID:15590684","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA processing","termid":"GO:0016180"},{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016073","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"snRNA 2,2,7-trimethylguanosine (TMG) capping","synonyms":[{"name":"snRNA 2,2,7-trimethylguanosine (TMG) cap formation","type":"exact"},{"name":"snRNA 5'-end processing","type":"broad"},{"name":"snRNA capping","type":"exact"}],"termid":"GO:1990273"}


id: PBO:0044500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl leukotriene receptor 1","termid":"PBO:0044500"}


id: RO:0003309
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) and a condition (a phenotype or disease), where the presence of the entity worsens some or all aspects of the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_severity_of_condition","termid":"RO:0003305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exacerbates_condition","termid":"RO:0003309"}


id: PBO:0041477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 68","termid":"PBO:0041477"}


id: PBO:0061054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipsnap homolog 2","termid":"PBO:0061054"}


id: PR:O00102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 G2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03045","PANTHER:PTHR24067:SF36","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2-18 kDa (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.04","secondary_identifiers":["UniProtKB:O00102"],"synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2G2","type":"exact"},{"name":"ubiquitin carrier protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00102"}


id: GO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene receptor activity","termid":"GO:0004974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"leukotriene B4 receptor activity","synonyms":[{"name":"BLT receptor","type":"narrow"}],"termid":"GO:0001632"}


id: PBO:0064000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 34","termid":"PBO:0064000"}


id: GO:0031490
data:
  {"annotated_genes":["SJAG_00698","SJAG_02815","SJAG_05333","SJAG_00861","SJAG_03944","SJAG_03354","SJAG_00164","SJAG_04879","SJAG_00585","SJAG_01827"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91583,103125,106083,107268,110555],"is_not":false,"summary":null,"term":"GO:0031490"},{"annotations":[95661,105268,103048,111529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043035"},{"annotations":[108034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140585"}]},"cv_name":"molecular_function","definition":"Binding to DNA that is assembled into chromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"},{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00164":null,"SJAG_00585":null,"SJAG_00698":null,"SJAG_00861":null,"SJAG_01827":null,"SJAG_02815":null,"SJAG_03354":null,"SJAG_03944":null,"SJAG_04879":null,"SJAG_05333":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"chromatin DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031490","terms_by_termid":{"GO:0031490":null,"GO:0043035":null,"GO:0140585":null}}


id: PBO:0015661
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae AOS1","termid":"PBO:0015661"}


id: PBO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DRB1","termid":"PBO:0001162"}


id: GO:0033412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"UAG codon-amino acid adaptor activity","synonyms":[{"name":"TAG codon-amino acid adaptor activity","type":"exact"}],"termid":"GO:0033412"}


id: GO:0042110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell activation","synonyms":[{"name":"T lymphocyte activation","type":"exact"},{"name":"T-cell activation","type":"exact"},{"name":"T-lymphocyte activation","type":"exact"}],"termid":"GO:0042110"}


id: PBO:0087896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; component of the heteromeric Ino2p/Ino4p basic helix-loop-helix transcription activator that binds inositol/choline-responsive elements (ICREs), required for derepression of phospholipid biosynthetic genes in response to inositol depletion; involved in diauxic shift","termid":"PBO:0087896"}


id: GO:0007495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of cell-cell signaling between visceral mesoderm cells and endoderm cells that is involved in the differentiation of cells in the midgut.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"midgut development","termid":"GO:0007494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"visceral mesoderm-endoderm interaction involved in midgut development","synonyms":[{"name":"visceral mesoderm/endoderm interaction","type":"exact"}],"termid":"GO:0007495"}


id: GO:0004343
data:
  {"annotated_genes":["SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69696],"is_not":false,"summary":null,"term":"GO:0004343"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosamine 6-phosphate + acetyl-CoA = N-acetyl-D-glucosamine 6-phosphate + CoA + H+.","definition_xrefs":["RHEA:10292","EC:2.3.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"glucosamine 6-phosphate N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-449734","KEGG_REACTION:R02058","MetaCyc:GLUCOSAMINEPNACETYLTRANS-RXN"],"synonyms":[{"name":"D-glucosamine-6-P N-acetyltransferase activity","type":"related"},{"name":"N-acetylglucosamine-6-phosphate synthase activity","type":"related"},{"name":"acetyl-CoA:D-glucosamine-6-phosphate N-acetyltransferase activity","type":"related"},{"name":"aminodeoxyglucosephosphate acetyltransferase activity","type":"related"},{"name":"glucosamine 6-phosphate acetylase activity","type":"related"},{"name":"glucosamine-6-phosphate acetylase activity","type":"related"},{"name":"glucosamine-phosphate N-acetyltransferase activity","type":"exact"},{"name":"phosphoglucosamine N-acetylase activity","type":"related"},{"name":"phosphoglucosamine acetylase activity","type":"related"},{"name":"phosphoglucosamine transacetylase activity","type":"related"}],"termid":"GO:0004343","terms_by_termid":{"GO:0004343":null}}


id: PBO:0050055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, V (pseudogene)","termid":"PBO:0050055"}


id: PBO:0071073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 75","termid":"PBO:0071073"}


id: PBO:0047112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM161 centrosomal protein A","termid":"PBO:0047112"}


id: GO:1901665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of NAD+ ADP-ribosyltransferase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of NAD+ ADP-ribosyltransferase activity (obsolete GO:1901665)","synonyms":[{"name":"down regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"down regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"down regulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"down regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"down regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"down regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"down regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"down regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"down-regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"down-regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"down-regulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"down-regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"down-regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"down-regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"down-regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"down-regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"downregulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"downregulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"downregulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"downregulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"downregulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"downregulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"downregulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"downregulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"inhibition of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"inhibition of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"inhibition of NAD+ ADP-ribosyltransferase activity","type":"narrow"},{"name":"inhibition of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"inhibition of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"inhibition of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"inhibition of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"inhibition of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"negative regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"negative regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"negative regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"negative regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"negative regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"negative regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"negative regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"}],"termid":"GO:1901665"}


id: FYECO:0000314
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02576:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02576","name":"rad25delta","uniquename":"SJAG_02576:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02771:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02771","name":"rad1delta","uniquename":"SJAG_02771:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115329,115365,115541,115359,115363,115330,115364,115367,115428,115440,115444,115449,115452,115750,115751,115752,115370,115371,115515,115516,115517,115518,115519,115520,115522,115523,115749,115753,115358,115362,115433],"is_not":false,"summary":null,"term":"FYECO:0000314"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which camptothecin (CPT) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping 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type"}]}]},"SJAG_00124delta":{"display_name":"SJAG_00124delta","display_uniquename":"SJAG_00124delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00124:allele-1","expression":"Null"}]}]},"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"rad1delta":{"display_name":"rad1delta","display_uniquename":"rad1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02771:allele-1","expression":"Null"}]}]},"rad24delta":{"display_name":"rad24delta","display_uniquename":"rad24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02266:allele-1","expression":"Null"}]}]},"rad25delta":{"display_name":"rad25delta","display_uniquename":"rad25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02576:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"+ CPT","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null,"PMID:31150379":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_04551","SJAG_01205","SJAG_02013","SJAG_04697","SJAG_00610","SJAG_01605","SJAG_02266","SJAG_01787","SJAG_02771","SJAG_02592","SJAG_00124","SJAG_01680","SJAG_01410","SJAG_03720","SJAG_00364","SJAG_02576","SJAG_00429"],"single_locus_genotype_uniquenames":["SJAG_00124delta","sty1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","rad24delta","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","pck1delta","tel1delta","pyp1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","atf1delta","rad26delta","gms1delta","rad1delta","rad51delta","pck2delta","rad3delta","chk1delta","pmk1delta","rad9delta","crb2delta","rad25delta"],"synonyms":[{"name":"+ camptothecin","type":"exact"}],"termid":"FYECO:0000314","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0065788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase catalytic subunit 1 pseudogene 1","termid":"PBO:0065788"}


id: GO:0051031
data:
  {"annotated_genes":["SJAG_03156","SJAG_03358","SJAG_04083","SJAG_00178","SJAG_04622","SJAG_02661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85383,108145,109687,101864,101389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[95621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016031"},{"annotations":[109688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of tRNA, transfer ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_02661":null,"SJAG_03156":null,"SJAG_03358":null,"SJAG_04083":null,"SJAG_04622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"tRNA transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051031","terms_by_termid":{"GO:0006409":null,"GO:0016031":null,"GO:0071528":null}}


id: PBO:0051801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing GTPase activating protein 3","termid":"PBO:0051801"}


id: PBO:0071333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 10","termid":"PBO:0071333"}


id: PR:Q9C0X0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC29A3.21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A3.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.21","synonyms":[{"name":"Spom972h-SPBC29A3.21","type":"exact"}],"termid":"PR:Q9C0X0"}


id: PBO:0089416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S45","termid":"PBO:0089416"}


id: PR:Q96WS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WS6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPJ732.03","synonyms":[{"name":"Spom972h-meu15","type":"exact"}],"termid":"PR:Q96WS6"}


id: PBO:0078001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 2","termid":"PBO:0078001"}


id: GO:0052697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a xenobiotic substance by the conjugation of glucuronic acid. The resultant glucuronosides are often much more water-soluble than the xenobiotic precursor, enabling efficient excretion.","definition_xrefs":["GOC:BHF","PMID:20056724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"cellular glucuronidation","termid":"GO:0052695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"xenobiotic glucuronidation","synonyms":[{"name":"phase II metabolism","type":"narrow"}],"termid":"GO:0052697"}


id: PBO:0013022
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DHODH","termid":"PBO:0013022"}


id: GO:0042812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pheromones, a substance that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"},{"relation_name":"is_a","term_name":"pheromone metabolic process","termid":"GO:0042810"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044248"],"is_obsolete":false,"name":"pheromone catabolic process","secondary_identifiers":["GO:0007327","GO:0046614"],"synonyms":[{"name":"pheromone breakdown","type":"exact"},{"name":"pheromone catabolism","type":"exact"},{"name":"pheromone degradation","type":"exact"}],"termid":"GO:0042812"}


id: PBO:0109088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 2","termid":"PBO:0109088"}


id: FYPO:0003240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphodiesterase I activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphodiesterase I activity","termid":"FYPO:0003239"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased phosphodiesterase I activity","synonyms":[{"name":"reduced phosphodiesterase I activity","type":"exact"}],"termid":"FYPO:0003240"}


id: GO:0015066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of alpha-amylase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0004857","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"alpha-amylase inhibitor activity","termid":"GO:0015066"}


id: PBO:0087515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved single-stranded DNA binding protein complex involved in DNA replication, repair, recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; with Sgs1p-Top2p-Rmi1p, stimulates DNA catenation/decatenation activity of Top3p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087515"}


id: PBO:0047557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF12 antisense RNA 2","termid":"PBO:0047557"}


id: PBO:0076802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 3","termid":"PBO:0076802"}


id: PBO:0073257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 1","termid":"PBO:0073257"}


id: GO:0090660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurological system process driven by motile cilia on ependymal cells of the brain by which cerebrospinal fluid circulates from the sites of secretion to the sites of absorption. In ventricular cavities, the flow is unidirectional and rostrocaudal, in subarachnoid spaces, the flow is multi-directional.","definition_xrefs":["PMID:22100360","PMID:24229449","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cilium movement involved in extracellular fluid movement","termid":"GO:0003351"},{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cerebrospinal fluid circulation","synonyms":[{"name":"CSF circulation","type":"exact"},{"name":"CSF flow","type":"exact"},{"name":"cerebrospinal fluid flow","type":"exact"}],"termid":"GO:0090660"}


id: GO:0046357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactarate, the anion of galactaric acid.","definition_xrefs":["ISBN:0198506732","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid biosynthetic process","termid":"GO:0019578"},{"relation_name":"is_a","term_name":"galactarate metabolic process","termid":"GO:0019580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galactarate biosynthetic process","secondary_identifiers":["GO:0042872"],"synonyms":[{"name":"D-galactarate anabolism","type":"related"},{"name":"D-galactarate biosynthesis","type":"related"},{"name":"D-galactarate biosynthetic process","type":"related"},{"name":"D-galactarate formation","type":"related"},{"name":"D-galactarate synthesis","type":"related"},{"name":"galactarate anabolism","type":"exact"},{"name":"galactarate biosynthesis","type":"exact"},{"name":"galactarate formation","type":"exact"},{"name":"galactarate synthesis","type":"exact"}],"termid":"GO:0046357"}


id: PBO:0027187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_organization","termid":"PBO:0027187"}


id: GO:0002937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes whereby a uridine residue in a tRNA is converted to 4-thiouridine. Typically 4-thiouridine is found at position 8, in many transfer RNAs.","definition_xrefs":["ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA thio-modification","termid":"GO:0034227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA 4-thiouridine biosynthesis","termid":"GO:0002937"}


id: PBO:0075279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 19 pseudogene 4","termid":"PBO:0075279"}


id: PR:Q9P7J4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mft1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit mft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.11c","synonyms":[{"name":"Spom972h-mft1","type":"exact"}],"termid":"PR:Q9P7J4"}


id: PBO:0030452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_anaerobic_cell_population_growth","termid":"PBO:0030452"}


id: GO:0061354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the pericardium.","definition_xrefs":["PMID:19056682","GOC:mtg_heart","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in pericardium morphogenesis (obsolete GO:0061354)","termid":"GO:0061354"}


id: PBO:0044417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily U member 1","termid":"PBO:0044417"}


id: GO:0140441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an arachidonoyl (systematic name, (5Z,8Z,11Z,14Z)-eicosatetraenoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: in the reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoyl-CoA + L-cysteinyl-[protein] = CoA + S-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-L-cysteinyl-[protein].","definition_xrefs":["PMID:22247542","PMID:22968831","PMID:12681491","RHEA:59748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein-cysteine S-arachidonoyltransferase activity","termid":"GO:0140441"}


id: PBO:0083336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the telomere on the right arm of chromosome 13","termid":"PBO:0083336"}


id: PBO:0083860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Farnesyl cysteine-carboxyl methyltransferase; mediates the carboxyl methylation step during C-terminal CAAX motif processing of a-factor and RAS proteins in the endoplasmic reticulum, localizes to the ER membrane","termid":"PBO:0083860"}


id: PATO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc","definition_xrefs":["PATOC:MH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lemon-shaped","termid":"PATO:0002345"}


id: PBO:0059127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylpurine DNA glycosylase","termid":"PBO:0059127"}


id: PBO:0065953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD21 cohesin complex component","termid":"PBO:0065953"}


id: PBO:0051630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 1","termid":"PBO:0051630"}


id: GO:0048891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lateral line ganglion neuron.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"},{"relation_name":"part_of","term_name":"lateral line ganglion development","termid":"GO:0048890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line ganglion neuron differentiation","synonyms":[{"name":"gLL neuron differentiation","type":"exact"}],"termid":"GO:0048891"}


id: GO:0016092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prenols, isoprenoids of general formula (H-CH2-C(CH3)=CH-CH2-)n-OH, any primary monohydroxy alcohol whose carbon skeleton consists of two or more isoprenoid residues linked head to tail.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"},{"relation_name":"is_a","term_name":"prenol metabolic process","termid":"GO:0016090"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"prenol catabolic process","synonyms":[{"name":"prenol breakdown","type":"exact"},{"name":"prenol catabolism","type":"exact"},{"name":"prenol degradation","type":"exact"}],"termid":"GO:0016092"}


id: GO:1990372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to organic acid.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to organic acid (obsolete GO:1990372)","termid":"GO:1990372"}


id: PBO:0083410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YML089C; exhibits growth defect on a non-fermentable (respiratory) carbon source","termid":"PBO:0083410"}


id: PBO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gfo/idh/mocA family oxidoreductase (predicted)","termid":"PBO:0002387"}


id: PBO:0045778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial cell transforming 2","termid":"PBO:0045778"}


id: GO:0016861
data:
  {"annotated_genes":["SJAG_01346","SJAG_00839","SJAG_01455","SJAG_00070","SJAG_03614","SJAG_04192","SJAG_02648"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003949"},{"annotations":[99756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004347"},{"annotations":[104519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004476"},{"annotations":[99612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004640"},{"annotations":[84974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004751"},{"annotations":[103132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046523"},{"annotations":[112525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004807"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is an aldose or a ketose, are the same molecule, and no oxidized product appears.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00839":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02648":null,"SJAG_03614":null,"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.3.1.-"],"synonyms":[{"name":"intramolecular isomerase activity, interconverting aldoses and ketoses","type":"exact"}],"termid":"GO:0016861","terms_by_termid":{"GO:0003949":null,"GO:0004347":null,"GO:0004476":null,"GO:0004640":null,"GO:0004751":null,"GO:0004807":null,"GO:0046523":null}}


id: GO:0032886
data:
  {"annotated_genes":["SJAG_00244","SJAG_01821","SJAG_04461","SJAG_03637","SJAG_00845","SJAG_04597","SJAG_00661","SJAG_04312","SJAG_03048","SJAG_04464","SJAG_00514","SJAG_00082","SJAG_02332","SJAG_03073","SJAG_02045","SJAG_00333"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902845"},{"annotations":[97524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062168"},{"annotations":[97936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[86033,90454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[107580],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[90455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[111209,96261,99819,101477,109208,111482,87163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070507"},{"annotations":[87412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031110"},{"annotations":[107155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[107156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032888"},{"annotations":[111210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[85904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"microtubule-based process","termid":"GO:0007017"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01821":null,"SJAG_02045":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03637":null,"SJAG_04312":null,"SJAG_04461":null,"SJAG_04464":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microtubule-based process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032886","terms_by_termid":{"GO:0031110":null,"GO:0031117":null,"GO:0032888":null,"GO:0060236":null,"GO:0062168":null,"GO:0070507":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null,"GO:1902845":null,"GO:1902846":null,"GO:1902854":null}}


id: PBO:0067824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 126","termid":"PBO:0067824"}


id: GO:0030374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A transcription coactivator activity that activates or increases the transcription of specific gene sets via binding to a DNA-bound nuclear receptor, either on its own or as part of a complex. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators. A fourth class of coactivator activity is the bridging of a DNA-binding transcription factor to the general (basal) transcription machinery. The Mediator complex, which bridges sequence-specific DNA binding transcription factors and RNA polymerase, is also a transcription coactivator.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coactivator activity","termid":"GO:0003713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003713"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003712"}],"interesting_parent_ids":["GO:0003713","GO:0030674","GO:0003674","GO:0140110","GO:0060090","GO:0003712"],"is_obsolete":false,"name":"nuclear receptor coactivator activity","secondary_identifiers":["GO:0038049"],"synonyms":[{"name":"ligand-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"},{"name":"ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"},{"name":"nuclear receptor transcription coactivator activity","type":"exact"},{"name":"transcription factor activity, ligand-activated RNA polymerase II transcription factor binding","type":"exact"}],"termid":"GO:0030374"}


id: GO:0001409
data:
  {"annotated_genes":["SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111311],"is_not":false,"summary":null,"term":"GO:0001409"}]},"cv_name":"molecular_function","definition":"Enables the transfer of guanine nucleotides (GMP, GDP, and GTP) from one side of a membrane to the other.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transmembrane transporter activity","termid":"GO:0015216"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00760":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"guanine nucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001409","terms_by_termid":{"GO:0001409":null}}


id: PBO:0076732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 1 pseudogene 1","termid":"PBO:0076732"}


id: PBO:0052624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 3","termid":"PBO:0052624"}


id: PBO:0043772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX20 pseudogene 1","termid":"PBO:0043772"}


id: PBO:0085233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pbp1p binding protein; interacts strongly with Pab1p-binding protein 1 (Pbp1p) in the yeast two-hybrid system; also interacts with Lsm12p in a copurification assay; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085233"}


id: PR:Q92367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1652.02 gene.","definition_xrefs":["UniProtKB:Q92367","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino-acid permease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1652.02","synonyms":[{"name":"Spom972h-SPBC1652.02","type":"exact"}],"termid":"PR:Q92367"}


id: PBO:0083563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene YEL020W-A; identified by fungal homology and RT-PCR","termid":"PBO:0083563"}


id: PR:000027604
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3, initiator methionine removed methylated form that is recognized by the HP1-like protein Swi6 in Schizosaccharomyces pombe. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00663.","definition_xrefs":["PMID:11242054","PomBase:MAH","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me(K9)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K9me","type":"exact"},{"name":"hht3/InitMet-/Me:(K10)","type":"exact"},{"name":"hht3/Me(K9)","type":"exact"}],"termid":"PR:000027604"}


id: PBO:0030417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_plasmid_loss","termid":"PBO:0030417"}


id: PBO:0000431
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectable marker","termid":"PBO:0000431"}


id: GO:0005971
data:
  {"annotated_genes":["SJAG_04665","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88458,103384],"is_not":false,"summary":null,"term":"GO:0005971"}]},"cv_name":"cellular_component","definition":"An enzyme complex composed of 2-4 or more subunits, which usually contains nonheme iron and requires ATP for catalysis. Catalyzes the formation of 2'-deoxyribonucleoside diphosphate from ribonucleoside diphosphate, using either thioredoxin disulfide or glutaredoxin disulfide as an acceptor.","definition_xrefs":["PMID:21336276","PMID:10716984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNR complex","type":"exact"},{"name":"ribonucleotide reductase complex","type":"exact"}],"termid":"GO:0005971","terms_by_termid":{"GO:0005971":null}}


id: GO:0047024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5alpha-androstane-3beta,17beta-diol + NADP+ = 17beta-hydroxy-5alpha-androstan-3-one + H+ + NADPH.","definition_xrefs":["RHEA:16297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"5alpha-androstane-3beta,17beta-diol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04344","EC:1.1.1.210","MetaCyc:1.1.1.210-RXN"],"synonyms":[{"name":"3-beta(or 20-alpha)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3-beta-HSD activity","type":"related"},{"name":"3beta(or 20alpha)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3beta(or 20alpha)-hydroxysteroid:NADP+ oxidoreductase activity","type":"broad"},{"name":"3beta,20alpha-hydroxysteroid oxidoreductase activity","type":"broad"},{"name":"dehydrogenase, 3beta,20alpha-hydroxy steroid","type":"broad"},{"name":"progesterone reductase activity","type":"related"}],"termid":"GO:0047024"}


id: GO:1903023
data:
  {"annotated_genes":["SJAG_02736","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113106],"is_not":false,"summary":null,"term":"GO:1903023"},{"annotations":[86758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of an ascospore-type prospore membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11405625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ascospore-type prospore membrane formation","termid":"GO:0032120"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_02736":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0061024","GO:0044085","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of ascospore-type prospore membrane formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of FSM assembly","type":"exact"},{"name":"regulation of FSM biosynthesis","type":"exact"},{"name":"regulation of FSM formation","type":"exact"},{"name":"regulation of ascospore-type prospore membrane assembly","type":"related"},{"name":"regulation of forespore membrane biosynthesis","type":"exact"},{"name":"regulation of forespore membrane formation","type":"exact"}],"termid":"GO:1903023","terms_by_termid":{"GO:1903023":null,"GO:1903024":null}}


id: PBO:0045555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 7","termid":"PBO:0045555"}


id: FYPO:0002163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall thickness during vegetative growth","termid":"FYPO:0006745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002946"],"is_obsolete":false,"name":"decreased cell wall thickness during vegetative growth","synonyms":[{"name":"decreased cell wall thickness during mitotic cell cycle","type":"related"},{"name":"reduced cell wall thickness during vegetative growth","type":"exact"},{"name":"thin cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0002163"}


id: GO:0016192
data:
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id: GO:0070862
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id: PBO:0002132
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id: PBO:0061993
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id: GO:1904579
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id: PBO:0046461
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id: GO:0002950
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id: PATO:0005004
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id: GO:1902068
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id: PBO:0075155
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id: FYPO:0007277
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id: GO:0019488
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id: GO:0098541
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id: GO:0055003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibril assembly","termid":"GO:0030239"},{"relation_name":"part_of","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"cardiac myofibril assembly","synonyms":[{"name":"cardiac myofibril development","type":"exact"},{"name":"cardiac myofibril morphogenesis","type":"exact"},{"name":"heart myofibril assembly","type":"related"}],"termid":"GO:0055003"}


id: PBO:0060885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolus and neural progenitor protein","termid":"PBO:0060885"}


id: PBO:0000661
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.-","termid":"PBO:0000661"}


id: PBO:0045309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3 beta","termid":"PBO:0045309"}


id: PBO:0067739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 38","termid":"PBO:0067739"}


id: PBO:0084947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multifunctional lipase/hydrolase/phospholipase; triacylglycerol lipase, steryl ester hydrolase, and Ca2+-independent phospholipase A2; catalyzes acyl-CoA dependent acylation of LPA to PA; required with Tgl3p for timely bud formation; phosphorylated and activated by Cdc28p; TGL4 has a paralog, TGL5, that arose from the whole genome duplication","termid":"PBO:0084947"}


id: GO:0070545
data:
  {"annotated_genes":["SJAG_02830","SJAG_02759","SJAG_00882"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96481,102112,106943],"is_not":false,"summary":null,"term":"GO:0070545"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in coordinating ribosome biogenesis with cell cycle progression. In human, it is composed of Pes1, Bop1, and WDR12; in Saccharomyces the proteins are known as Nop7p, Erb1 and Ytm1 respectively.","definition_xrefs":["PMID:17353269","GOC:mah","GOC:ab","PMID:16043514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00882":null,"SJAG_02759":null,"SJAG_02830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0030684","GO:0005634","GO:0032991","GO:0005575","GO:0005730"],"is_obsolete":false,"name":"PeBoW complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070545","terms_by_termid":{"GO:0070545":null}}


id: PBO:0039992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 6","termid":"PBO:0039992"}


id: PBO:0043956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma A","termid":"PBO:0043956"}


id: GO:0042408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of geranyl diphosphate (GPP) into the acyclic monoterpenes beta-myrcene, (E)-beta-ocimene, and other minor cyclic monoterpenes.","definition_xrefs":["GOC:cr","PMID:10700382"],"gene_count":0,"genotype_count":0,"name":"obsolete myrcene/(E)-beta-ocimene synthase activity (obsolete GO:0042408)","synonyms":[{"name":"myrcene/(E)-beta-ocimene synthase activity","type":"exact"},{"name":"myrcene/ocimene synthase activity","type":"exact"}],"termid":"GO:0042408"}


id: GO:0106322
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99588],"is_not":false,"summary":null,"term":"GO:0106322"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione + NAD+ = S-formylglutathione + NADH + H+.","definition_xrefs":["RHEA:19985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity","termid":"GO:0051903"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106322","terms_by_termid":{"GO:0106322":null}}


id: FYPO:0007250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of lipid binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal lipid binding","termid":"FYPO:0007250"}


id: GO:0019878
data:
  {"annotated_genes":["SJAG_02388","SJAG_04688","SJAG_01630","SJAG_01955","SJAG_00869","SJAG_03312","SJAG_01574","SJAG_01061","SJAG_00502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86382,89019,92417,92742,94425,97287,98015,105831,109606],"is_not":false,"summary":null,"term":"GO:0019878"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine by the aminoadipic pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process","termid":"GO:0009085"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00502":null,"SJAG_00869":null,"SJAG_01061":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01955":null,"SJAG_02388":null,"SJAG_03312":null,"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lysine biosynthetic process via aminoadipic acid","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lysine anabolism via aminoadipic acid","type":"exact"},{"name":"lysine biosynthesis, aminoadipic acid pathway","type":"exact"},{"name":"lysine biosynthesis, aminoadipic pathway","type":"exact"},{"name":"lysine biosynthetic process, aminoadipic acid pathway","type":"exact"},{"name":"lysine biosynthetic process, aminoadipic pathway","type":"exact"},{"name":"lysine formation via aminoadipic acid","type":"exact"},{"name":"lysine synthesis via aminoadipic acid","type":"exact"}],"termid":"GO:0019878","terms_by_termid":{"GO:0019878":null}}


id: PBO:0028294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_dioxygenase_activity","termid":"PBO:0028294"}


id: GO:0045957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the alternative pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation, alternative pathway","termid":"GO:0030451"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"negative regulation of complement activation","termid":"GO:0045916"},{"relation_name":"negatively_regulates","term_name":"complement activation, alternative pathway","termid":"GO:0006957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of complement activation, alternative pathway","synonyms":[{"name":"down regulation of complement activation, alternative pathway","type":"exact"},{"name":"down-regulation of complement activation, alternative pathway","type":"exact"},{"name":"downregulation of complement activation, alternative pathway","type":"exact"},{"name":"inhibition of complement activation, alternative pathway","type":"narrow"},{"name":"negative regulation of complement cascade, alternative pathway","type":"exact"}],"termid":"GO:0045957"}


id: GO:1903329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iron-sulfur cluster assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"}


id: PBO:0055284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2711","termid":"PBO:0055284"}


id: PBO:0083134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual specificity protein phosphatase; dephosphorylates T1 and S5 in  C-terminal domain (CTD) of RNA polymerase II largest subunit, Rpo21p; autoregulates turnover of its mRNA; has a cysteine-rich motif required for function and conserved in eukaryotes; shuttles between the nucleus and cytoplasm; RTR1 has a paralog, RTR2, that arose from the whole genome duplication","termid":"PBO:0083134"}


id: PATO:0000877
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000877 absolute respiratory rate value (obsolete PATO:0000877)","termid":"PATO:0000877"}


id: PBO:0049576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.W histone 4, pseudogene","termid":"PBO:0049576"}


id: PBO:0054007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1337","termid":"PBO:0054007"}


id: PBO:0087142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein that modulates mRNA stability; regulates genes involved in cell cycle, sister chromatid cohesion, and stress response; modulates stability and translational efficiency of CLN3 mRNA; colocalizes with P-bodies/stress granules where it may sequester specific mRNAs; regulates cell fate and critical cell size required for passage through Start; regulates ploidy; forms aggregates in older cells, leading to sterility","termid":"PBO:0087142"}


id: PBO:0085249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Perilipin, involved in formation and stability of lipid droplets; expression pattern suggests a role in respiratory growth; computational analysis of large-scale protein-protein interaction data suggests a role in ATP/ADP exchange","termid":"PBO:0085249"}


id: PR:G2TRR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.32 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.32","synonyms":[{"name":"Spom972h-SPBP8B7.32","type":"exact"}],"termid":"PR:G2TRR5"}


id: PBO:0065027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 4 pseudogene 1","termid":"PBO:0065027"}


id: PBO:0034046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_similarity_relationship_with","termid":"PBO:0034046"}


id: PBO:0054448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1845","termid":"PBO:0054448"}


id: GO:0046055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009172"},{"relation_name":"is_a","term_name":"dGMP metabolic process","termid":"GO:0046054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dGMP catabolic process","synonyms":[{"name":"dGMP breakdown","type":"exact"},{"name":"dGMP catabolism","type":"exact"},{"name":"dGMP degradation","type":"exact"}],"termid":"GO:0046055"}


id: PBO:0080216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VIM antisense RNA 1","termid":"PBO:0080216"}


id: PBO:0027540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleosome_positioning_at_stress_response_genes","termid":"PBO:0027540"}


id: PBO:0043957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma B","termid":"PBO:0043957"}


id: PBO:0005150
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.95","termid":"PBO:0005150"}


id: GO:0090294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to an increase in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:mah","PMID:19104072","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription","termid":"GO:0090293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"nitrogen catabolite activation of transcription","synonyms":[{"name":"positive regulation of transcription by nitrogen catabolites","type":"exact"}],"termid":"GO:0090294"}


id: PBO:0080340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 104 pseudogene","termid":"PBO:0080340"}


id: MOD:00573
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15174056","Unimod:353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized lysine biotinylated with biotin hydrazide","synonyms":[{"name":"Lysbiotinhydrazide","type":"related"},{"name":"oxidized Lysine biotinylated with biotin hydrazide","type":"related"}],"termid":"MOD:00573"}


id: PBO:0018222
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FE Protein","termid":"PBO:0018222"}


id: PBO:0084761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial methionyl-tRNA synthetase (MetRS); functions as a monomer in mitochondrial protein synthesis; functions similarly to cytoplasmic MetRS although the cytoplasmic form contains a zinc-binding domain not found in Msm1p","termid":"PBO:0084761"}


id: GO:0080084
data:
  {"annotated_genes":["SJAG_03354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"}]},"cv_name":"molecular_function","definition":"Binding to a 5S rDNA sequence, encoding ribosomal 5S rRNA, which is individually transcribed by RNA polymerase III, rather than by RNA polymerase I, in species where it exists.","definition_xrefs":["PMID:12711688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rDNA binding","termid":"GO:0000182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"5S rDNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0080084","terms_by_termid":{"GO:0001002":null}}


id: GO:0020010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spiral cytoskeletal structure located at the apical end of the apical complex in some apicomplexan parasites. Fibers form a left-handed spiral, and are comprised of tubulin protofilaments organized in a ribbon-like structure that differs from the conventional tubular structure characteristic of microtubules.","definition_xrefs":["PMID:16518471","PMID:11901169","GOC:expert_dr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"conoid","termid":"GO:0020010"}


id: PBO:0087464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of an alternative replication factor C complex; important for DNA replication and genome integrity; suppresses spontaneous DNA damage; involved in homologous recombination-mediated repair and telomere homeostasis; required for PCNA (Pol30p) unloading during DNA replication","termid":"PBO:0087464"}


id: PBO:0057879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3183","termid":"PBO:0057879"}


id: GO:0015750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which pentose is transported across a lipid bilayer, from one side of a membrane to the other. A pentose is any aldose with a chain of five carbon atoms in the molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transport","termid":"GO:0015749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"pentose transmembrane transport","synonyms":[{"name":"pentose transport","type":"related"}],"termid":"GO:0015750"}


id: GO:0050804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trans-synaptic signaling","termid":"GO:0099177"},{"relation_name":"regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modulation of chemical synaptic transmission","synonyms":[{"name":"modulation of synaptic transmission","type":"broad"},{"name":"regulation of chemical synaptic transmission","type":"exact"},{"name":"regulation of synaptic transmission","type":"exact"}],"termid":"GO:0050804"}


id: PBO:0061636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT16 divergent transcript","termid":"PBO:0061636"}


id: PBO:0017802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lipoate-protein ligase Lip2","termid":"PBO:0017802"}


id: PR:Q10196
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC11C11.05 gene.","definition_xrefs":["UniProtKB:Q10196","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11C11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.05","synonyms":[{"name":"Spom972h-SPBC11C11.05","type":"exact"}],"termid":"PR:Q10196"}


id: GO:0009571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a proplastid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"proplastid","termid":"GO:0009537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"proplastid stroma","termid":"GO:0009571"}


id: PBO:0048635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 4","termid":"PBO:0048635"}


id: GO:1990668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane of the ERGIC. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane","synonyms":[{"name":"vesicle fusion with ER-Golgi intermediate compartment (ERGIC) membrane","type":"exact"},{"name":"vesicle fusion with ER-Golgi intermediate compartment membrane","type":"exact"},{"name":"vesicle fusion with ERGIC membrane","type":"exact"},{"name":"vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:1990668"}


id: PBO:0064440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich nuclear receptor coactivator 2","termid":"PBO:0064440"}


id: PBO:0065056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 10","termid":"PBO:0065056"}


id: GO:0015699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of antimonite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"antimonite transmembrane transport","synonyms":[{"name":"antimonite transport","type":"broad"}],"termid":"GO:0015699"}


id: GO:0033159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the vectorial transfer of a protein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein import into nucleus, translocation (obsolete GO:0033159)","synonyms":[{"name":"negative regulation of protein import into cell nucleus, translocation","type":"exact"}],"termid":"GO:0033159"}


id: PBO:0017841
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S Phase Delayed","termid":"PBO:0017841"}


id: PBO:0054682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2090","termid":"PBO:0054682"}


id: PBO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.11","termid":"PBO:0002301"}


id: GO:0036530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of methylglyoxal from a glycated protein, to form lactate and a deglycated protein.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:25416785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"lactate biosynthetic process","termid":"GO:0019249"},{"relation_name":"is_a","term_name":"protein deglycation","termid":"GO:0036525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"protein deglycation, methylglyoxal removal","synonyms":[{"name":"protein deglycation of methylglyoxal-glycated protein","type":"related"}],"termid":"GO:0036530"}


id: GO:0150037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium-dependent activation of synaptic vesicle fusion.","definition_xrefs":["PMID:27052163","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031630"},{"relation_name":"regulates","term_name":"calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0099502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0150037"}


id: PR:Q9C0W3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP22H7.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0W3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein P22H7.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.04","synonyms":[{"name":"Spom972h-SPBP22H7.04","type":"exact"}],"termid":"PR:Q9C0W3"}


id: PBO:0086768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; similar to the mouse IMPACT gene; YDL177C is not an essential gene","termid":"PBO:0086768"}


id: PBO:0114276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma crystallin family protein","termid":"PBO:0114276"}


id: GO:0003093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glomerular filtration. Glomerular filtration is the process in which blood is filtered by the glomerulus into the renal tubule.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of blood volume","termid":"GO:0001977"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"glomerular filtration","termid":"GO:0003094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glomerular filtration","termid":"GO:0003093"}


id: GO:0018290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron and molybdenum into a Mo-7Fe-8S iron-molybdenum-sulfur cluster via L-cysteinyl homocitryl molybdenum-heptairon-nonasulfide, found in nitrogenase.","definition_xrefs":["RESID:AA0141"],"gene_count":0,"genotype_count":0,"name":"obsolete iron and molybdenum incorporation into iron-molybdenum-sulfur cluster via L-cysteinyl homocitryl molybdenum-heptairon-nonasulfide (obsolete GO:0018290)","synonyms":[{"name":"iron and molybdenum incorporation into iron-molybdenum-sulphur cluster via L-cysteinyl homocitryl molybdenum-heptairon-nonasulphide","type":"exact"}],"termid":"GO:0018290"}


id: GO:1903784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium ion import across the plasma membrane.","definition_xrefs":["GOC:nc","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:19376779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transport","termid":"GO:1902307"},{"relation_name":"is_a","term_name":"regulation of sodium ion import across plasma membrane","termid":"GO:1903782"},{"relation_name":"positively_regulates","term_name":"sodium ion import across plasma membrane","termid":"GO:0098719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sodium ion import across plasma membrane","synonyms":[{"name":"activation of sodium ion import across plasma membrane","type":"narrow"},{"name":"up regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"up-regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"upregulation of sodium ion import across plasma membrane","type":"exact"}],"termid":"GO:1903784"}


id: GO:0000033
data:
  {"annotated_genes":["SJAG_03056","SJAG_04952"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052925"},{"annotations":[98395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004378"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannose residue to an oligosaccharide, forming an alpha-(1->3) linkage.","definition_xrefs":["PMID:10521541","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03056":null,"SJAG_04952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"alpha-1,3-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-4549368","Reactome:R-HSA-4720473","Reactome:R-HSA-446188","Reactome:R-HSA-446208"],"termid":"GO:0000033","terms_by_termid":{"GO:0004378":null,"GO:0052925":null}}


id: PBO:0046933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 50 member A","termid":"PBO:0046933"}


id: GO:1903564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cilium.","definition_xrefs":["PMID:22072986","GOC:krc","GOC:cilia","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cilium","termid":"GO:1903564"}


id: PBO:0054818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2231","termid":"PBO:0054818"}


id: FYPO:0007610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total volume of all mitochondria in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitochondrial volume","synonyms":[{"name":"decreased mitochondrial volume during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial volume during vegetative growth","type":"exact"},{"name":"decreased total mitochondrial volume","type":"exact"}],"termid":"FYPO:0007610"}


id: PBO:0041974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 15","termid":"PBO:0041974"}


id: GO:0045552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-3,4-leucopelargonidin + NADP+ = (+)-dihydrokaempferol + NADPH + H+.","definition_xrefs":["EC:1.1.1.219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydrokaempferol 4-reductase activity","secondary_identifiers":["RHEA:23016","MetaCyc:DIHYDROKAEMPFEROL-4-REDUCTASE-RXN"],"synonyms":[{"name":"NADPH-dihydromyricetin reductase activity","type":"related"},{"name":"cis-3,4-leucopelargonidin:NADP+ 4-oxidoreductase activity","type":"related"},{"name":"dihydroflavanol 4-reductase activity","type":"related"},{"name":"dihydroflavonol 4-reductase activity","type":"related"},{"name":"dihydromyricetin reductase activity","type":"related"},{"name":"dihydroquercetin reductase activity","type":"related"}],"termid":"GO:0045552"}


id: GO:0034074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidosqualene = marneral.","definition_xrefs":["PMID:18033581","GOC:cb","PMID:16425307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"marneral synthase activity","secondary_identifiers":["RHEA:31875","MetaCyc:RXN-9664"],"termid":"GO:0034074"}


id: PBO:0067304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 390, pseudogene","termid":"PBO:0067304"}


id: PBO:0039798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity regulated cytoskeleton associated protein","termid":"PBO:0039798"}


id: GO:0004849
data:
  {"annotated_genes":["SJAG_00533","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89000,111078],"is_not":false,"summary":null,"term":"GO:0004849"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + uridine = ADP + UMP.","definition_xrefs":["RHEA:16825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"uridine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:URIDINEKIN-RXN","Reactome:R-HSA-8954327"],"synonyms":[{"name":"uridine phosphokinase activity","type":"exact"},{"name":"uridine-cytidine kinase activity","type":"narrow"}],"termid":"GO:0004849","terms_by_termid":{"GO:0004849":null}}


id: PR:P79005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere length regulator taz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.07c","synonyms":[{"name":"Spom972h-taz1","type":"exact"}],"termid":"PR:P79005"}


id: PBO:0001543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone for ATPase activity (predicted)","termid":"PBO:0001543"}


id: FYPO:0001090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to heat shock. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"},{"relation_name":"is_a","term_name":"resistance to heat shock","termid":"FYPO:0002045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to heat shock during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to heat shock","type":"exact"},{"name":"resistance to heat shock during mitotic cell cycle","type":"related"},{"name":"resistant to heat shock during vegetative growth","type":"exact"}],"termid":"FYPO:0001090"}


id: PBO:0031048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_acetylation","termid":"PBO:0031048"}


id: SO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is localized inside the cytoplasm.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extramembrane_polypeptide_region","termid":"SO:0001072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"cytoplasmic_polypeptide_region","secondary_identifiers":["BS:00145"],"synonyms":[{"name":"cytoplasm_location","type":"exact"},{"name":"cytoplasmic polypeptide region","type":"exact"},{"name":"inside","type":"related"}],"termid":"SO:0001073"}


id: PBO:0028022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_polymerase_activity","termid":"PBO:0028022"}


id: GO:0060244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of cell proliferation in response to cell density.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"part_of","term_name":"contact inhibition","termid":"GO:0060242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in contact inhibition","termid":"GO:0060244"}


id: PBO:0089127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14","termid":"PBO:0089127"}


id: PBO:0040100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"artemin","termid":"PBO:0040100"}


id: PBO:0080202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial zinc finger 1","termid":"PBO:0080202"}


id: PBO:0091896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive poison Wtf4","termid":"PBO:0091896"}


id: PBO:0064934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPT2-EGFL8 readthrough (NMD candidate)","termid":"PBO:0064934"}


id: PBO:0043525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA6 antisense RNA 1","termid":"PBO:0043525"}


id: PBO:0083026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this ORF was removed when a sequence update created a stop codon after residue 23","termid":"PBO:0083026"}


id: PBO:0042959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1","termid":"PBO:0042959"}


id: GO:0071846
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86902],"is_not":false,"summary":null,"term":"GO:0071846"}]},"cv_name":"biological_process","definition":"An actin filament severing process that results in the removal of actin filament branches specifically at the branch points.","definition_xrefs":["GOC:mah","GOC:jh","PMID:20362448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin filament debranching","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071846","terms_by_termid":{"GO:0071846":null}}


id: GO:0021796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in the creation of areas within the cerebral cortex that will direct the behavior of cell migration and differentiation as the cortex develops.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"telencephalon regionalization","termid":"GO:0021978"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex regionalization","synonyms":[{"name":"cerebral cortex arealization","type":"exact"},{"name":"cerebral cortex pattern biosynthesis","type":"exact"},{"name":"cerebral cortex pattern formation","type":"exact"}],"termid":"GO:0021796"}


id: FYPO:0003987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of actin cortical patches is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"},{"relation_name":"output_of","term_name":"abnormal actin cortical patch organization","termid":"FYPO:0000790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cortical patch","synonyms":[{"name":"abnormal F-actin patch","type":"exact"},{"name":"abnormal actin cortical patch during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patches","type":"exact"},{"name":"abnormal actin patch","type":"exact"}],"termid":"FYPO:0003987"}


id: PATO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000121 relative height (obsolete PATO:0000121)","termid":"PATO:0000121"}


id: PBO:0090090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2' O-ribose methyltransferase Mrm2-like","termid":"PBO:0090090"}


id: PBO:0087753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex; involved in the formation of Q-tRNAQ; mutation is functionally complemented by the bacterial GatB ortholog","termid":"PBO:0087753"}


id: GO:1905414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion-dependent exocytosis","termid":"GO:0045955"},{"relation_name":"is_a","term_name":"regulation of dense core granule exocytosis","termid":"GO:1905413"},{"relation_name":"negatively_regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of dense core granule exocytosis","synonyms":[{"name":"down regulation of dense core granule exocytosis","type":"exact"},{"name":"down regulation of dense core vesicle exocytosis","type":"exact"},{"name":"down-regulation of dense core granule exocytosis","type":"exact"},{"name":"down-regulation of dense core vesicle exocytosis","type":"exact"},{"name":"downregulation of dense core granule exocytosis","type":"exact"},{"name":"downregulation of dense core vesicle exocytosis","type":"exact"},{"name":"inhibition of dense core granule exocytosis","type":"narrow"},{"name":"inhibition of dense core vesicle exocytosis","type":"narrow"},{"name":"negative regulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905414"}


id: PBO:0066526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 2","termid":"PBO:0066526"}


id: GO:0003831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminylglycopeptide.","definition_xrefs":["EC:2.4.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2046298","Reactome:R-HSA-975919","Reactome:R-HSA-9035949","Reactome:R-HSA-9035950","Reactome:R-HSA-2046265","Reactome:R-HSA-3656230","MetaCyc:2.4.1.38-RXN","Reactome:R-HSA-1912352","Reactome:R-HSA-2025723","Reactome:R-HSA-4793956","RHEA:22932"],"synonyms":[{"name":"GalT activity","type":"related"},{"name":"UDP-galactose--glycoprotein galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyl-beta-D-glucosaminylglycopeptide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose-glycoprotein galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-beta-D-glucosaminylglycopeptide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetyl-beta-(1,4)-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetyl-beta-1,4-galactosyltransferase activity","type":"related"},{"name":"glycoprotein 4-beta-galactosyl-transferase activity","type":"related"},{"name":"glycoprotein 4-beta-galactosyltransferase activity","type":"related"},{"name":"glycoprotein beta-galactosyltransferase activity","type":"related"},{"name":"thyroid galactosyltransferase activity","type":"narrow"},{"name":"thyroid glycoprotein beta-galactosyltransferase","type":"narrow"},{"name":"uridine diphosphogalactose-glycoprotein galactosyltransferase activity","type":"related"}],"termid":"GO:0003831"}


id: GO:1904323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15937517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904323"}


id: PBO:0077432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 167B","termid":"PBO:0077432"}


id: PBO:0038988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor beta 2","termid":"PBO:0038988"}


id: PBO:0028124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_pear-shaped_vegetative_cell","termid":"PBO:0028124"}


id: GO:0046999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate or frequency of conjugation, the union or introduction of genetic information from compatible mating types that results in a genetically different individual.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of conjugation (obsolete GO:0046999)","termid":"GO:0046999"}


id: PBO:0084704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial GTP/GDP transporter; essential for mitochondrial genome maintenance; has a role in mitochondrial iron transport; member of the mitochondrial carrier family","termid":"PBO:0084704"}


id: PBO:0079452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUSC2 pseudogene 2","termid":"PBO:0079452"}


id: PBO:0035709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasmic_microtubule","termid":"PBO:0035709"}


id: GO:0002722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell mediated immunity","termid":"GO:0002713"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of B cell cytokine production","termid":"GO:0002721"},{"relation_name":"negatively_regulates","term_name":"B cell cytokine production","termid":"GO:0002368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of B cell cytokine production","synonyms":[{"name":"down regulation of B cell cytokine production","type":"exact"},{"name":"down-regulation of B cell cytokine production","type":"exact"},{"name":"downregulation of B cell cytokine production","type":"exact"},{"name":"inhibition of B cell cytokine production","type":"narrow"},{"name":"negative regulation of B lymphocyte cytokine production","type":"exact"},{"name":"negative regulation of B-cell cytokine production","type":"exact"},{"name":"negative regulation of B-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002722"}


id: GO:0035301
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that binds microtubules in a Hedgehog-dependent manner, and is required for signal transduction by members of the Hedgehog family of proteins. The core components of the complex are the serine/threonine protein kinase Fused, the kinesin motor protein Costal2 (Cos2), and a zinc finger transcription factor (Gli family members in humans, and Cubitus interruptus (Ci) in Drosophila).","definition_xrefs":["PMID:10825151","PMID:15057936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Hedgehog signaling complex","synonyms":[{"name":"HSC","type":"exact"},{"name":"Hedgehog signalling complex","type":"exact"}],"termid":"GO:0035301"}


id: FYPO:0002370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 56 of histone H3 in regions of the genome that are actively transcribed occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:23851719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K56 acetylation in transcribed regions during vegetative growth","synonyms":[{"name":"increased histone H3-K56 acetylation in transcribed regions during mitotic cell cycle","type":"related"},{"name":"increased histone H3K56 acetylation in transcribed regions during vegetative growth","type":"exact"}],"termid":"FYPO:0002370"}


id: PBO:0091798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-Pro dipeptidase","termid":"PBO:0091798"}


id: PBO:0084551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric region; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme","termid":"PBO:0084551"}


id: GO:0042809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear vitamin D receptor, a nuclear receptor that mediates the action of vitamin D by binding DNA and controlling the transcription of hormone-sensitive genes.","definition_xrefs":["PMID:12637589","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"nuclear vitamin D receptor binding","synonyms":[{"name":"VDR binding","type":"exact"},{"name":"calciferol receptor binding","type":"narrow"},{"name":"vitamin D receptor binding","type":"broad"}],"termid":"GO:0042809"}


id: PBO:0042294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD4 molecule","termid":"PBO:0042294"}


id: PBO:0075711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 3","termid":"PBO:0075711"}


id: GO:0052246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near a second organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis on or near other organism involved in symbiotic interaction (obsolete GO:0052246)","synonyms":[{"name":"positive energy taxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052246"}


id: PBO:0028235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_arginine_catabolic_process_to_proline","termid":"PBO:0028235"}


id: PBO:0044409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily F member 2, pseudogene","termid":"PBO:0044409"}


id: PBO:0079672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 2","termid":"PBO:0079672"}


id: PBO:0070716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 21","termid":"PBO:0070716"}


id: PBO:0017912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein implicated in mating Dni2 (predicted)","termid":"PBO:0017912"}


id: PBO:0070854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 7","termid":"PBO:0070854"}


id: PBO:0081752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 681","termid":"PBO:0081752"}


id: FYPO:0006125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a nuclear body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to nuclear body","synonyms":[{"name":"normal protein localisation to nuclear body","type":"exact"},{"name":"normal protein localization to nuclear body during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nuclear body during vegetative growth","type":"exact"}],"termid":"FYPO:0006125"}


id: PR:P41892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc7 gene.","definition_xrefs":["UniProtKB:P41892","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.06c","synonyms":[{"name":"Spom972h-cdc7","type":"exact"}],"termid":"PR:P41892"}


id: SO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of exonic sequence of the 3' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3_prime_UTR_variant","termid":"SO:0001624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3_prime_UTR_exon_variant","synonyms":[{"name":"3 prime UTR exon variant","type":"exact"}],"termid":"SO:0002089"}


id: GO:1904425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of GTP binding.","definition_xrefs":["GO_REF:0000059","PMID:19066305","PMID:21454546","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"},{"relation_name":"is_a","term_name":"regulation of GTP binding","termid":"GO:1904424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of GTP binding","synonyms":[{"name":"down regulation of GTP binding","type":"exact"},{"name":"down-regulation of GTP binding","type":"exact"},{"name":"downregulation of GTP binding","type":"exact"},{"name":"inhibition of GTP binding","type":"narrow"}],"termid":"GO:1904425"}


id: PBO:0088137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane zinc transporter; transports zinc from storage in the vacuole to the cytoplasm when needed; transcription is induced under conditions of zinc deficiency","termid":"PBO:0088137"}


id: GO:0043864
data:
  {"annotated_genes":["SJAG_02721","SJAG_01987"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59030,96424],"is_not":false,"summary":null,"term":"GO:0043864"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: iH2O + indole-3-acetamide = (indol-3-yl)acetate + NH4+. Indole-3-acetamide is known as IAM and indole-3-acetate as IAA.","definition_xrefs":["GOC:jl","RHEA:34371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidase activity","termid":"GO:0004040"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01987":null,"SJAG_02721":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"indoleacetamide hydrolase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:G-5841"],"synonyms":[{"name":"IAH","type":"exact"},{"name":"IaaH","type":"related"},{"name":"Tms2","type":"related"},{"name":"indole acetamide hydrolase activity","type":"exact"},{"name":"indole-3-acetamide hydrolase activity","type":"exact"}],"termid":"GO:0043864","terms_by_termid":{"GO:0043864":null}}


id: PBO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol binding ankyrin repeat protein (predicted)","termid":"PBO:0001068"}


id: GO:0102251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10'-apo-beta-carotenal + O2 = 13-apo-beta-carotenone + 4-methylocta-2,4,6-trienedial.","definition_xrefs":["GOC:pz","EC:1.13.11.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"all-trans-beta-apo-10'-carotenal cleavage oxygenase activity","secondary_identifiers":["RHEA:26401","MetaCyc:RXN-12393"],"termid":"GO:0102251"}


id: PBO:0080285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 48 pseudogene","termid":"PBO:0080285"}


id: PBO:0057737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1343","termid":"PBO:0057737"}


id: PBO:0012026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein involved in transcriptional regulation (predicted)","termid":"PBO:0012026"}


id: SO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which bacterial RNA polymerase sigma 70 binds, to begin transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_RNApol_promoter","termid":"SO:0000613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial_RNApol_promoter_sigma_70_element","synonyms":[{"name":"bacterial RNA polymerase promoter sigma 70","type":"exact"}],"termid":"SO:0001671"}


id: PR:Q9P7D5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.14c gene.","definition_xrefs":["UniProtKB:Q9P7D5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P4H10.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.14c","synonyms":[{"name":"Spom972h-SPBP4H10.14c","type":"exact"}],"termid":"PR:Q9P7D5"}


id: GO:0033046
data:
  {"annotated_genes":["SJAG_03126","SJAG_04884","SJAG_00883","SJAG_04699","SJAG_01837","SJAG_01330","SJAG_04999","SJAG_03681","SJAG_01679","SJAG_00460","SJAG_02336","SJAG_04259","SJAG_01297","SJAG_02451","SJAG_02169","SJAG_01082","SJAG_03353","SJAG_04126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112066,110426,109938,95669,103357,108107,100008,104382,86753],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[109942,97883,110654,102434,106043,111718,86755,95515,112849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[102435,111719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[99384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[90241],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112853],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[90242],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid segregation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid segregation","termid":"GO:0033045"},{"relation_name":"is_a","term_name":"negative regulation of chromosome segregation","termid":"GO:0051985"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"sister chromatid segregation","termid":"GO:0000819"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sister chromatid segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033046","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:2000816":null}}


id: GO:0090228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of red or far-red light signaling pathway","termid":"GO:0090227"},{"relation_name":"positively_regulates","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of red or far-red light signaling pathway","synonyms":[{"name":"positive regulation of phytochrome signaling pathway","type":"exact"},{"name":"positive regulation of red or far-red light signalling pathway","type":"exact"}],"termid":"GO:0090228"}


id: PBO:0055431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2861","termid":"PBO:0055431"}


id: PBO:0068526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 125, pseudogene","termid":"PBO:0068526"}


id: GO:0050473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,11Z,13E)-(15S)-15-hydroperoxyicosa-5,8,11,13-tetraenoate.","definition_xrefs":["EC:1.13.11.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arachidonate 15-lipoxygenase activity","secondary_identifiers":["Reactome:R-HSA-2161951","Reactome:R-HSA-9020262","Reactome:R-HSA-9024872","Reactome:R-HSA-9026003","Reactome:R-HSA-9027627","Reactome:R-HSA-9028255","Reactome:R-HSA-9020261","Reactome:R-HSA-9027532","Reactome:R-HSA-9027607","Reactome:R-HSA-9018907","Reactome:R-HSA-9020610","Reactome:R-HSA-9024881","Reactome:R-HSA-9025152","Reactome:R-HSA-2162002","RHEA:16869","MetaCyc:ARACHIDONATE-15-LIPOXYGENASE-RXN","Reactome:R-HSA-9020275"],"synonyms":[{"name":"15-lipoxygenase activity","type":"related"},{"name":"arachidonate omega(6) lipoxygenase activity","type":"related"},{"name":"arachidonate omega6 lipoxygenase activity","type":"related"},{"name":"arachidonate:oxygen 15-oxidoreductase activity","type":"related"},{"name":"linoleic acid omega6-lipoxygenase activity","type":"related"},{"name":"omega6 lipoxygenase activity","type":"related"}],"termid":"GO:0050473"}


id: PBO:0062159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 12 pseudogene","termid":"PBO:0062159"}


id: FYPO:0008022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing alanine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0001985","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell population growth on alanine nitrogen source","synonyms":[{"name":"abolished alanine utilization","type":"related"},{"name":"abolished growth on alanine nitrogen source","type":"broad"},{"name":"abolished vegetative cell population growth on alanine nitrogen source","type":"exact"},{"name":"cell population growth on alanine nitrogen source abolished","type":"exact"}],"termid":"FYPO:0008022"}


id: PBO:0063348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pecanex 2","termid":"PBO:0063348"}


id: PATO:0000843
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000843 relative auditory threshold value (obsolete PATO:0000843)","termid":"PATO:0000843"}


id: SO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that is polyadenylated.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"adjacent_to","term_name":"polyA_sequence","termid":"SO:0000610"},{"relation_name":"has_quality","term_name":"polyadenylated","termid":"SO:0000246"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylated_mRNA","synonyms":[{"name":"polyadenylated mRNA","type":"exact"}],"termid":"SO:0000871"}


id: PBO:0049048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 39","termid":"PBO:0049048"}


id: PBO:0049730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis A virus cellular receptor 1 pseudogene 1","termid":"PBO:0049730"}


id: GO:2000678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription regulatory region DNA binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}


id: PBO:0057597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 934","termid":"PBO:0057597"}


id: PATO:0002097
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition to progress, invade surrounding tissues or metastasize.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, malignant","termid":"PATO:0002097"}


id: GO:0006059
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving hexitols, any alditol with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hexitol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hexitol metabolism","type":"exact"},{"name":"sugar alcohol (hexitol) metabolic process","type":"exact"},{"name":"sugar alcohol (hexitol) metabolism","type":"exact"}],"termid":"GO:0006059","terms_by_termid":{"GO:0006062":null}}


id: PBO:0060255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCN opposite strand","termid":"PBO:0060255"}


id: FYPO:0005852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biotinylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"},{"relation_name":"is_a","term_name":"abnormal protein biotinylation during vegetative growth","termid":"FYPO:0005851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein biotinylation during vegetative growth","synonyms":[{"name":"decreased protein biotinylation during mitotic cell cycle","type":"related"},{"name":"reduced protein biotinylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005852"}


id: PBO:0038460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-aminobutyrate aminotransferase","termid":"PBO:0038460"}


id: PBO:0046741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 1","termid":"PBO:0046741"}


id: FYPO:0006547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of phosphatidylserine (PS) in the plasma membrane is abnormal such that the PS level is lower than normal at one or both cell tips. Normally, PS shows a polarized distribution with a higher concentration at the cell tips than in the lateral plasma membrane.","definition_xrefs":["PomBase:mah","PMID:27852900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane phosphatidylserine distribution","termid":"FYPO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal plasma membrane phosphatidylserine distribution resulting in decreased concentration at cell tip","synonyms":[{"name":"abnormal plasma membrane PS distribution resulting in decreased concentration at cell tip","type":"exact"},{"name":"abnormal plasma membrane phosphatidylserine distribution resulting in decreased concentration at cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal plasma membrane phosphatidylserine distribution resulting in decreased concentration at cell tip during vegetative growth","type":"exact"},{"name":"abnormal plasma membrane phosphatidylserine distribution resulting in reduced concentration at cell tip","type":"exact"},{"name":"decreased plasma membrane phosphatidylserine polarity","type":"related"},{"name":"reduced plasma membrane phosphatidylserine polarity","type":"related"}],"termid":"FYPO:0006547"}


id: PBO:0078791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 14-1","termid":"PBO:0078791"}


id: PBO:0030645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_pH","termid":"PBO:0030645"}


id: GO:0043256
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, extracellular glycoprotein complex composed of three different polypeptide chains, alpha, beta and gamma. Provides an integral part of the structural scaffolding of basement membranes.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"basement membrane","termid":"GO:0005604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin complex","termid":"GO:0043256"}


id: FYPO:0001412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfide (S2-, also called acid labile sulfide) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular sulfide level","termid":"FYPO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular sulfide level","synonyms":[{"name":"decreased cellular acid labile sulfide level","type":"exact"},{"name":"decreased cellular sulfide accumulation","type":"related"},{"name":"decreased cellular sulfide ion level","type":"exact"},{"name":"decreased cellular sulfide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sulfide level during vegetative growth","type":"exact"},{"name":"decreased cellular sulphide level","type":"exact"},{"name":"reduced cellular sulfide level","type":"exact"}],"termid":"FYPO:0001412"}


id: GO:0018678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + NADPH + H+ + O2 = hydroquinone + NADP+ + H2O + CO2.","definition_xrefs":["EC:1.14.13.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-hydroxybenzoate 1-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.64-RXN","UM-BBD_reactionID:r0752"],"synonyms":[{"name":"4-hydroxybenzoate 1-monooxygenase activity","type":"exact"},{"name":"4-hydroxybenzoate,NAD(P)H:oxygen oxidoreductase (1-hydroxylating, decarboxylating)","type":"related"}],"termid":"GO:0018678"}


id: GO:0050155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + L-ornithine = H2O + L-glutamate + 3,4-dihydro-2H-pyrrole-2-carboxylate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ornithine(lysine) transaminase activity (obsolete GO:0050155)","synonyms":[{"name":"L-ornithine(L-lysine):2-oxoglutarate-aminotransferase activity","type":"exact"},{"name":"L-ornithine:2-oxoglutarate-aminotransferase activity","type":"exact"},{"name":"lysine/ornithine:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"ornithine(lysine) aminotransferase activity","type":"exact"}],"termid":"GO:0050155"}


id: PBO:0078872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 6","termid":"PBO:0078872"}


id: PBO:0114345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter family, related to 7-keto 8-aminopelargonic acid transporter","termid":"PBO:0114345"}


id: GO:2001009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant-type cell wall cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of cellulose biosynthetic process","termid":"GO:2001006"},{"relation_name":"regulates","term_name":"plant-type cell wall cellulose biosynthetic process","termid":"GO:0052324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of plant-type cell wall cellulose biosynthetic process","synonyms":[{"name":"regulation of cell wall cellulose biosynthesis","type":"exact"},{"name":"regulation of cellulose biosynthesis during cell wall biosynthesis","type":"related"}],"termid":"GO:2001009"}


id: PBO:0057989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3914-1","termid":"PBO:0057989"}


id: PATO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a continuous convex surface with an axis of symmetry and one axis longer than the other; characterized with an egg-shaped form crossed with a lance-head shaped form.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lanceolate","termid":"PATO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lance-ovate","termid":"PATO:0002337"}


id: PBO:0062458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 136 pseudogene","termid":"PBO:0062458"}


id: GO:1901580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of telomeric RNA transcription from RNA pol II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of telomeric RNA transcription from RNA pol II promoter (obsolete GO:1901580)","synonyms":[{"name":"regulation of telomeric RNA transcription from Pol II promoter","type":"exact"}],"termid":"GO:1901580"}


id: PBO:0074361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 6","termid":"PBO:0074361"}


id: PBO:0113153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase, component of both Rpd3S and Rpd3L complexes; regulates transcription, silencing, autophagy and other processes by influencing chromatin remodeling; forms at least two different complexes which have distinct functions and members; Rpd3(L) recruitment to the subtelomeric region is regulated by interaction with the Hmt1p methyltransferase; delays late firing of single copy origins by opposing the Fkh1/2 origin activation pathway","termid":"PBO:0113153"}


id: PBO:0017623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Mdm31","termid":"PBO:0017623"}


id: GO:0098569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the mycolate outer membrane that faces the cell wall peptidoglycan. It is rich in long-chain mycolic acids (hydroxylated branched-chain fatty acids) that are covalently linked to the cell wall peptidoglycan via an arabinogalactan network.","definition_xrefs":["PMID:18567661","PMID:18316738","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"internal side of mycolate outer membrane","termid":"GO:0098569"}


id: PBO:0084225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 (Ssa1p) nucleotide exchange factor; required for the release of misfolded proteins from the Hsp70 system to the Ub-proteasome machinery for degradation; cytosolic homolog of Sil1p, which is the nucleotide exchange factor for BiP (Kar2p) in the endoplasmic reticulum; protein abundance increases in response to DNA replication stress","termid":"PBO:0084225"}


id: PBO:0034575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_HMW_SUMO_conjugate_level","termid":"PBO:0034575"}


id: PBO:0017879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Gtp1, implicated in cytoplasmic translation (predicted)","termid":"PBO:0017879"}


id: GO:0160211
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the lipid bilayers that surround an apicoplast and form the apicoplast envelope.","definition_xrefs":["PMID:20124342","PMID:38865262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"apicoplast","termid":"GO:0020011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"apicoplast membrane","termid":"GO:0160211"}


id: GO:0032470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the concentration of calcium ions in the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum calcium ion homeostasis","termid":"GO:0032469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum calcium ion concentration","synonyms":[{"name":"elevation of ER calcium ion concentration","type":"exact"},{"name":"elevation of calcium ion concentration in endoplasmic reticulum","type":"exact"},{"name":"elevation of endoplasmic reticulum calcium ion concentration","type":"exact"},{"name":"endoplasmic reticulum calcium ion concentration elevation","type":"exact"}],"termid":"GO:0032470"}


id: GO:0035344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hypoxanthine, 6-hydroxypurine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transport","termid":"GO:0006863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"hypoxanthine transport","synonyms":[{"name":"6-hydroxypurine transport","type":"exact"},{"name":"hypoxanthine transmembrane transport","type":"exact"}],"termid":"GO:0035344"}


id: PBO:0029228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nocodazole","termid":"PBO:0029228"}


id: FYPO:0003100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is normal (i.e. indistinguishable from wild type) in regions containing protein-coding genes. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["GO:0031507","PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal heterochromatin assembly","termid":"FYPO:0003099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal heterochromatin assembly at protein coding gene","synonyms":[{"name":"normal heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"normal heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"normal heterochromatin assembly at protein-coding gene","type":"exact"},{"name":"normal heterochromatin formation at protein coding gene","type":"exact"}],"termid":"FYPO:0003100"}


id: GO:0033017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the sarcoplasmic reticulum.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum","termid":"GO:0016529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005789","GO:0005783"],"is_obsolete":false,"name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}


id: PBO:0045356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in primary ciliary dyskinesia homolog (mouse)","termid":"PBO:0045356"}


id: PBO:0081122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3H1-type containing","termid":"PBO:0081122"}


id: PBO:0090870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, iron ion","termid":"PBO:0090870"}


id: GO:0031000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them.","definition_xrefs":["GOC:mah","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to caffeine","termid":"GO:0031000"}


id: GO:0034694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin","synonyms":[{"name":"response to prostaglandin stimulus","type":"exact"}],"termid":"GO:0034694"}


id: FYPO:0007429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation does not occur during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:15805471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein degradation during cellular response to DNA damage","synonyms":[{"name":"abolished protein breakdown during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolic process during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolism during cellular response to DNA damage","type":"exact"},{"name":"abolished protein degradation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein degradation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein degradation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0007429"}


id: GO:2001075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metanephric ureteric bud development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of metanephric ureteric bud development","termid":"GO:2001074"},{"relation_name":"negatively_regulates","term_name":"metanephric part of ureteric bud development","termid":"GO:0035502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric ureteric bud development","termid":"GO:2001075"}


id: PBO:0059286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 1","termid":"PBO:0059286"}


id: PR:G2TRJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.21","synonyms":[{"name":"Spom972h-coa3","type":"exact"},{"name":"transcripts altered in meiosis protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRJ9"}


id: GO:0070017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to thrombospondin.","definition_xrefs":["PMID:2478219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphav-beta3 integrin-thrombospondin complex","synonyms":[{"name":"ITGAV-ITGB3-THBS1 complex","type":"narrow"}],"termid":"GO:0070017"}


id: PBO:0000808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT family","termid":"PBO:0000808"}


id: GO:1903467
data:
  {"annotated_genes":["SJAG_02162","SJAG_03048","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93840,98464,105022],"is_not":false,"summary":null,"term":"GO:1903467"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication initiation involved in mitotic DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","PMID:1234","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication initiation","termid":"GO:0032297"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle DNA replication","termid":"GO:1903464"},{"relation_name":"is_a","term_name":"regulation of mitotic DNA replication initiation","termid":"GO:1903466"},{"relation_name":"negatively_regulates","term_name":"mitotic DNA replication initiation","termid":"GO:1902975"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01210":null,"SJAG_02162":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"down regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"down-regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"down-regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"downregulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"downregulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"inhibition of DNA replication initiation involved in mitotic DNA replication","type":"narrow"},{"name":"inhibition of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"narrow"},{"name":"negative regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1903467","terms_by_termid":{"GO:1903467":null}}


id: GO:0019381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide.","definition_xrefs":["UM-BBD_pathwayID:atr","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"atrazine metabolic process","termid":"GO:0018873"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"atrazine catabolic process","secondary_identifiers":["MetaCyc:PWY-5724"],"synonyms":[{"name":"atrazine breakdown","type":"exact"},{"name":"atrazine catabolism","type":"exact"},{"name":"atrazine degradation","type":"exact"}],"termid":"GO:0019381"}


id: GO:0018939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving n-octane, the 8 carbon straight chain alkane used in organic syntheses, calibrations, and azeotropic distillations. It is a common component of gasoline and other petroleum products and the engine fuel antiknocking properties of an isomer of n-octane are used as a comparative standard in the Octane Rating System.","definition_xrefs":["UM-BBD_pathwayID:oct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"cellular alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"n-octane metabolic process","synonyms":[{"name":"n-octane metabolism","type":"exact"}],"termid":"GO:0018939"}


id: GO:0008446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose = GDP-4-dehydro-6-deoxy-alpha-D-mannose + H2O.","definition_xrefs":["RHEA:23820","EC:4.2.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"GDP-mannose 4,6-dehydratase activity","secondary_identifiers":["MetaCyc:GDPMANDEHYDRA-RXN","Reactome:R-HSA-6787632","KEGG_REACTION:R00888"],"synonyms":[{"name":"GDP-D-mannose 4,6-dehydratase activity","type":"related"},{"name":"GDP-D-mannose dehydratase activity","type":"related"},{"name":"GDP-mannose 4,6-hydro-lyase (GDP-4-dehydro-6-deoxy-D-mannose-forming)","type":"related"},{"name":"GDP-mannose 4,6-hydro-lyase activity","type":"related"},{"name":"GDPmannose 4,6-dehydratase activity","type":"related"},{"name":"Gmd","type":"related"},{"name":"guanosine 5'-diphosphate-D-mannose oxidoreductase activity","type":"related"},{"name":"guanosine diphosphomannose 4,6-dehydratase activity","type":"related"},{"name":"guanosine diphosphomannose oxidoreductase activity","type":"related"}],"termid":"GO:0008446"}


id: PR:O94264
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpe1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein P8B7.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.15c","synonyms":[{"name":"Spom972h-mpe1","type":"exact"}],"termid":"PR:O94264"}


id: PBO:0076884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 36","termid":"PBO:0076884"}


id: PBO:0062548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily M member 1, pseudogene","termid":"PBO:0062548"}


id: GO:0061230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric juxtaglomerulus cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell fate commitment","termid":"GO:0072150"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerulus cell differentiation","termid":"GO:0061207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric juxtaglomerulus cell fate commitment","termid":"GO:0061230"}


id: PATO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000024 sporophytic compatability (obsolete PATO:0000024)","termid":"PATO:0000024"}


id: PBO:0061567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase pseudogene 1","termid":"PBO:0061567"}


id: GO:0071115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta1 integrin complex bound to endostatin, the NC1 domain of the alpha1 chain of type XVIII collagen.","definition_xrefs":["PMID:12682293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha5-beta1 integrin-endostatin complex","synonyms":[{"name":"ITGA5-ITGB1-CAL4A3 complex","type":"narrow"}],"termid":"GO:0071115"}


id: PBO:0072016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 3","termid":"PBO:0072016"}


id: GO:0048281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of inflorescences are generated and organized. An inflorescence is the part of a seed plant body that is usually above ground and that can bear flowers.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"inflorescence development","termid":"GO:0010229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflorescence morphogenesis","termid":"GO:0048281"}


id: GO:1903667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemorepellent activity.","definition_xrefs":["GOC:TermGenie","PMID:22711818","PMID:24390142","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of negative chemotaxis","termid":"GO:0050923"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of chemorepellent activity","synonyms":[{"name":"regulation of chemorepellant activity","type":"exact"}],"termid":"GO:1903667"}


id: PBO:0090903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, S. pombe SPBC16G5.19 predicted on opposite strand, one is likely incorrect, similarity detected with tblastn (S. j 4008650-4008727) in the SPBC16G5.19 reading frame, unable to get a CDS.","termid":"PBO:0090903"}


id: GO:0070071
data:
  {"annotated_genes":["SJAG_06514","SJAG_04899","SJAG_04450","SJAG_01503","SJAG_06135","SJAG_05306","SJAG_00301","SJAG_07008","SJAG_04454","SJAG_00771","SJAG_01838","SJAG_01939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96768,112832,85077,105859,106281,92913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033615"},{"annotations":[98073,114494,109274,110351,106300,112722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070072"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting two-sector ATPase complex, a large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_00771":null,"SJAG_01503":null,"SJAG_01838":null,"SJAG_01939":null,"SJAG_04450":null,"SJAG_04454":null,"SJAG_04899":null,"SJAG_05306":null,"SJAG_06135":null,"SJAG_06514":null,"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070071","terms_by_termid":{"GO:0033615":null,"GO:0070072":null}}


id: PBO:0058564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6506","termid":"PBO:0058564"}


id: PBO:0072247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 22","termid":"PBO:0072247"}


id: PBO:0012821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-local_range","termid":"PBO:0012821"}


id: PBO:0063434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 8","termid":"PBO:0063434"}


id: GO:0140107
data:
  {"annotated_genes":["SJAG_02883","SJAG_01353"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85546,93065],"is_not":false,"summary":null,"term":"GO:0140107"}]},"cv_name":"molecular_function","definition":"Enables the transfer of potassium ions from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:10629185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity potassium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140107","terms_by_termid":{"GO:0140107":null}}


id: PBO:0006222
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predominantly single copy (one to one)","termid":"PBO:0006222"}


id: PBO:0067240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 311, pseudogene","termid":"PBO:0067240"}


id: GO:0048239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of genetic recombination within the telomere.","definition_xrefs":["GOC:jid","PMID:9635193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at telomere","termid":"GO:0072695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA recombination at telomere","synonyms":[{"name":"down regulation of telomeric recombination at telomere","type":"exact"},{"name":"down-regulation of telomeric recombination at telomere","type":"exact"},{"name":"downregulation of telomeric recombination at telomere","type":"exact"},{"name":"inhibition of telomeric recombination at telomere","type":"narrow"},{"name":"negative regulation of telomeric recombination at telomere","type":"exact"},{"name":"suppression of telomeric recombination at telomere","type":"exact"}],"termid":"GO:0048239"}


id: GO:0002188
data:
  {"annotated_genes":["SJAG_01487","SJAG_02628"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100173,101437],"is_not":false,"summary":null,"term":"GO:0002188"}]},"cv_name":"biological_process","definition":"A gene-specific translational control mechanism where the small ribosomal subunit remains attached to the mRNA following termination of translation, then resumes scanning on the same mRNA molecule and initiates again at a downstream start site. Reinitiation depends on de novo recruitment of the ternary complex that is required to recognize the next AUG codon.","definition_xrefs":["PMID:18056426","PMID:18765792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01487":null,"SJAG_02628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"translation reinitiation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002188","terms_by_termid":{"GO:0002188":null}}


id: GO:0010236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of plastoquinone, a lipid-soluble electron-transporting coenzyme present in the chloroplast.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"plastoquinone biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1581"],"synonyms":[{"name":"plastoquinone anabolism","type":"exact"},{"name":"plastoquinone biosynthesis","type":"exact"},{"name":"plastoquinone formation","type":"exact"},{"name":"plastoquinone synthesis","type":"exact"}],"termid":"GO:0010236"}


id: PBO:0064197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 5","termid":"PBO:0064197"}


id: GO:0015573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-glucosides from one side of a membrane to the other. Beta-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in a beta configuration.","definition_xrefs":["PMID:7883710","GOC:jl","ISBN:0815340729","ISBN:0198506732","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"beta-glucoside transmembrane transporter activity","secondary_identifiers":["GO:0015582"],"synonyms":[{"name":"beta-glucoside permease activity","type":"exact"}],"termid":"GO:0015573"}


id: GO:0015175
data:
  {"annotated_genes":["SJAG_04984","SJAG_02029","SJAG_04725","SJAG_04718","SJAG_04637","SJAG_04295","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109849,115185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[96324,94304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[106159,98905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[106160,98906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[96436,97299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"}]},"cv_name":"molecular_function","definition":"Enables the transfer of neutral L-amino acids from one side of a membrane to the other. Neutral amino acids have side chains with no charge at pH 7.3.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00626":null,"SJAG_02029":null,"SJAG_04295":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"neutral L-amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"neutral amino acid transmembrane transporter activity","type":"exact"},{"name":"neutral amino acid transporter activity","type":"broad"}],"termid":"GO:0015175","terms_by_termid":{"GO:0015182":null,"GO:0015187":null,"GO:0015188":null,"GO:0015193":null,"GO:0033229":null}}


id: PBO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-S isoprenylcysteine O-methyltransferase Mam4","termid":"PBO:0000852"}


id: PBO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress activated MAP kinase interacting protein Sin1","termid":"PBO:0002666"}


id: GO:0043013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or prevents the binding and fusion of a sperm to the oocyte plasma membrane.","definition_xrefs":["GOC:jl","PMID:34459848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fusion of sperm to egg plasma membrane","termid":"GO:0043012"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"fusion of sperm to egg plasma membrane involved in single fertilization","termid":"GO:0007342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of fusion of sperm to egg plasma membrane","synonyms":[{"name":"down regulation of fusion of sperm to egg plasma membrane","type":"exact"},{"name":"down-regulation of fusion of sperm to egg plasma membrane","type":"exact"},{"name":"downregulation of fusion of sperm to egg plasma membrane","type":"exact"},{"name":"inhibition of fusion of sperm to egg plasma membrane","type":"narrow"},{"name":"inhibition of sperm-oocyte fusion","type":"narrow"},{"name":"negative regulation of sperm-oocyte fusion","type":"narrow"}],"termid":"GO:0043013"}


id: PBO:0073453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 2","termid":"PBO:0073453"}


id: GO:0031466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul5 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cul5-RING ubiquitin ligase complex","synonyms":[{"name":"CDL5 complex","type":"exact"},{"name":"CRL5 complex","type":"exact"},{"name":"EC2S complex","type":"broad"},{"name":"SCF5 complex","type":"related"},{"name":"cullin-RING ligase 5","type":"exact"}],"termid":"GO:0031466"}


id: PBO:0055573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3009","termid":"PBO:0055573"}


id: RO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of intracellular endoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"has_endoparasite","termid":"RO:0002635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intracellular_endoparasite","termid":"RO:0002641"}


id: PBO:0001124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex subunit Vps16 (predicted)","termid":"PBO:0001124"}


id: PBO:0061812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 2 Y-linked","termid":"PBO:0061812"}


id: PBO:0026930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_composition","termid":"PBO:0026930"}


id: PBO:0078287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 20-1","termid":"PBO:0078287"}


id: PBO:0069142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 393, pseudogene","termid":"PBO:0069142"}


id: PBO:0030238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CDRE_promoter_in_response_to_calcium_ion","termid":"PBO:0030238"}


id: PR:Q9HDZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csr101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDZ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C589.09, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.09","synonyms":[{"name":"Spom972h-csr101","type":"exact"}],"termid":"PR:Q9HDZ5"}


id: PBO:0004641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bystin family U3 and U14 snoRNA associated protein (predicted)","termid":"PBO:0004641"}


id: PBO:0091891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase/ubiquitin protein ligase E3, human ERCC4 ortholog Rhp16/Rad16","termid":"PBO:0091891"}


id: PBO:0077644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 1","termid":"PBO:0077644"}


id: GO:0050275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: scopoletin + UDP-D-glucose = H+ + scopolin + UDP.","definition_xrefs":["RHEA:20453","EC:2.4.1.128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"scopoletin glucosyltransferase activity","secondary_identifiers":["MetaCyc:SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN","KEGG_REACTION:R03594"],"synonyms":[{"name":"SGTase activity","type":"related"},{"name":"UDP-glucose:scopoletin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:scopoletin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:scopoletin glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-scopoletin glucosyltransferase activity","type":"related"}],"termid":"GO:0050275"}


id: PR:O14358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm27 gene.","definition_xrefs":["UniProtKB:O14358","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S27, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.12c","synonyms":[{"name":"Spom972h-rsm27","type":"exact"}],"termid":"PR:O14358"}


id: PBO:0113376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cysteine synthase; localized to the mitochondrial outer membrane; interacts with TCD1 and TCD2, likely forming a complex","termid":"PBO:0113376"}


id: PBO:0061628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 11","termid":"PBO:0061628"}


id: PBO:0060409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 30, NatC catalytic subunit","termid":"PBO:0060409"}


id: PBO:0054747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2156","termid":"PBO:0054747"}


id: GO:0016704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for oxidoreductases acting on single donors with incorporation of molecular oxygen that cannot be more accurated categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, miscellaneous (obsolete GO:0016704)","synonyms":[{"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, miscellaneous","type":"exact"}],"termid":"GO:0016704"}


id: GO:0030337
data:
  {"annotated_genes":["SJAG_01823","SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100347,111572],"is_not":false,"summary":null,"term":"GO:0030337"}]},"cv_name":"molecular_function","definition":"An enzyme regulator activity that increases the processivity of polymerization by DNA polymerase, by allowing the polymerase to move rapidly along DNA while remaining topologically bound to it.","definition_xrefs":["GOC:mah","PMID:7903401","PMID:8087839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01823":null,"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"DNA polymerase processivity factor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"processivity clamp","type":"exact"},{"name":"sliding clamp","type":"narrow"}],"termid":"GO:0030337","terms_by_termid":{"GO:0030337":null}}


id: PBO:0087780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIIa of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain","termid":"PBO:0087780"}


id: PBO:0030874
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_amino_acid_import_during_vegetative_growth","termid":"PBO:0030874"}


id: PBO:0044402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 64, pseudogene","termid":"PBO:0044402"}


id: GO:0055065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of metal ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete metal ion homeostasis (obsolete GO:0055065)","termid":"GO:0055065"}


id: GO:0060298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"regulation of sarcomere organization","termid":"GO:0060297"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"sarcomere organization","termid":"GO:0045214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"positive regulation of sarcomere organization","synonyms":[{"name":"positive regulation of sarcomere organisation","type":"exact"}],"termid":"GO:0060298"}


id: GO:0042317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"penicillin metabolic process","termid":"GO:0042316"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0044248","GO:0019748"],"is_obsolete":false,"name":"penicillin catabolic process","synonyms":[{"name":"penicillin breakdown","type":"exact"},{"name":"penicillin catabolism","type":"exact"},{"name":"penicillin degradation","type":"exact"}],"termid":"GO:0042317"}


id: PBO:0064726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 62","termid":"PBO:0064726"}


id: PR:Q9HDY7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scm3 gene.","definition_xrefs":["UniProtKB:Q9HDY7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB1A10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.02","synonyms":[{"name":"Spom972h-scm3","type":"exact"}],"termid":"PR:Q9HDY7"}


id: PBO:0065994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid induced 14","termid":"PBO:0065994"}


id: GO:0030997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the two centrioles within a centrosome remain tightly paired; may be mediated by the assembly and disassembly of a proteinaceous linker.","definition_xrefs":["PMID:11076968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"},{"relation_name":"regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"}


id: PBO:0081737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 668","termid":"PBO:0081737"}


id: PBO:0066870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 170","termid":"PBO:0066870"}


id: GO:0031753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an endothelial differentiation G protein-coupled receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"endothelial differentiation G protein-coupled receptor binding","synonyms":[{"name":"endothelial differentiation G-protein coupled receptor binding","type":"exact"},{"name":"endothelial differentiation G-protein coupled receptor ligand","type":"narrow"}],"termid":"GO:0031753"}


id: PBO:0001789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate reductase (predicted)","termid":"PBO:0001789"}


id: GO:1990576
data:
  {"annotated_genes":["SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111695],"is_not":false,"summary":null,"term":"GO:1990576"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular glucose molecule and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:15667320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled glucose receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-protein coupled glucose receptor activity","type":"exact"}],"termid":"GO:1990576","terms_by_termid":{"GO:1990576":null}}


id: PBO:0039225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 7 like (gene/pseudogene)","termid":"PBO:0039225"}


id: PBO:0066947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 249","termid":"PBO:0066947"}


id: PR:O59834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-specific adenosine deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.14c","secondary_identifiers":["UniProtKB:O59834"],"synonyms":[{"name":"Spom972h-tadA","type":"exact"},{"name":"cytosine aminohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59834"}


id: PBO:0075773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 1","termid":"PBO:0075773"}


id: GO:0006184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete GTP catabolic process (obsolete GO:0006184)","synonyms":[{"name":"GTP breakdown","type":"exact"},{"name":"GTP catabolism","type":"exact"},{"name":"GTP degradation","type":"exact"},{"name":"GTP hydrolysis","type":"narrow"}],"termid":"GO:0006184"}


id: GO:0061903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that starts or increases the frequency or rate of 1-phosphatidylinositol-3-kinase activity.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:18723082"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of 1-phosphatidylinositol-3-kinase activity (obsolete GO:0061903)","termid":"GO:0061903"}


id: PBO:0012855
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in sister chromatid disjoining","termid":"PBO:0012855"}


id: PBO:0064069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 103","termid":"PBO:0064069"}


id: FYPO:0001578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing a dipeptide such as Leu-Ala as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on dipeptide nitrogen source","synonyms":[{"name":"normal cell population growth on dipeptide nitrogen source","type":"exact"},{"name":"normal dipeptide utilization","type":"related"},{"name":"normal vegetative cell population growth on dipeptide nitrogen source","type":"exact"}],"termid":"FYPO:0001578"}


id: MOD:00976
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass - OBSOLETE because redundant and identical to MOD:01072. Remap to MOD:01072.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00976 potassium salt (obsolete MOD:00976)","termid":"MOD:00976"}


id: MOD:00769
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 71.0-71.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.1 Da","termid":"MOD:00616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 71.0-71.1 Da","termid":"MOD:00769"}


id: PBO:0050485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A13","termid":"PBO:0050485"}


id: MOD:00771
data:
  {"annotated_genes":["SJAG_02592","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115343,115342,115734,115341,115344,115733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 166.98-167.00 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 166.98-167.00 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"termid":"MOD:00771","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: PBO:0061973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AL member 1 pseudogene","termid":"PBO:0061973"}


id: GO:1900541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"fumonisin metabolic process","termid":"GO:1900539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fumonisin biosynthetic process","synonyms":[{"name":"fumonisin anabolism","type":"exact"},{"name":"fumonisin biosynthesis","type":"exact"},{"name":"fumonisin formation","type":"exact"},{"name":"fumonisin synthesis","type":"exact"}],"termid":"GO:1900541"}


id: PBO:0055452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2884","termid":"PBO:0055452"}


id: FYPO:0008246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from cenH measured in a cell is normal. cenH is a region located between mat2-P and mat3-M that is homologous to centromeric repeats, and that produces non-coding RNAs and small interfering RNAs.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cenH-derived RNA level","termid":"FYPO:0008246"}


id: PBO:0082782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the telomerase holoenzyme; involved in telomere replication; synthesis of the full-length protein results from a programmed +1 ribosomal frameshift","termid":"PBO:0082782"}


id: GO:0072689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MCM complex, a hexameric protein complex required for the initiation and regulation of DNA replication.","definition_xrefs":["GOC:mah","PMID:21813639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"MCM complex assembly","termid":"GO:0072689"}


id: GO:0046884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of follicle-stimulating hormone, a gonadotropic glycoprotein hormone secreted by the anterior pituitary.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadotropin secretion","termid":"GO:0032274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"follicle-stimulating hormone secretion","synonyms":[{"name":"FSH secretion","type":"exact"},{"name":"follicle stimulating hormone secretion","type":"exact"},{"name":"follitropin secretion","type":"exact"}],"termid":"GO:0046884"}


id: SO:0001500
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological_region characterized as a single heritable trait in a phenotype screen. The heritable phenotype may be mapped to a chromosome but generally has not been characterized to a specific gene locus.","definition_xrefs":["JAX:hdene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic_marker","termid":"SO:0001645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heritable_phenotypic_marker","synonyms":[{"name":"heritable phenotypic marker","type":"exact"},{"name":"phenotypic marker","type":"exact"}],"termid":"SO:0001500"}


id: PBO:0072930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 10","termid":"PBO:0072930"}


id: FYPO:0003266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is normal (i.e. indistinguishable from wild type) during a cellular response to nutrient.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity during cellular response to nutrient","synonyms":[{"name":"normal alpha,alpha-trehalase activity in response to nutrient","type":"exact"},{"name":"normal neutral trehalase activity during cellular response to nutrient","type":"exact"},{"name":"normal trehalase activity during cellular response to nutrient","type":"broad"}],"termid":"FYPO:0003266"}


id: MOD:00878
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"dimethyl pimelimidate modification from Unimod - Mechanism of the reaction of imidoesters with amines","definition_xrefs":["Unimod:456","PubMed:7171546","URL:http://dx.doi.org/10.1021/ja00877a017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidoester crosslink dimethyl pimelimidate doubly attached","synonyms":[{"name":"Both ends of crosslink attached to same peptide","type":"related"},{"name":"Xlink:DMP","type":"related"}],"termid":"MOD:00878"}


id: PBO:0004115
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.2.1.1","termid":"PBO:0004115"}


id: PBO:0030990
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_positioning_in_heterochromatin","termid":"PBO:0030990"}


id: GO:0046784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of intronless viral mRNA from the host nucleus to the cytoplasm for translation.","definition_xrefs":["PMID:11598019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation of molecules into host","termid":"GO:0044417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral mRNA export from host cell nucleus","synonyms":[{"name":"intronless viral mRNA export from host cell nucleus","type":"exact"},{"name":"intronless viral mRNA export from host nucleus","type":"related"},{"name":"intronless viral mRNA export out of nucleus","type":"exact"},{"name":"intronless viral mRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"intronless viral mRNA-nucleus export","type":"exact"}],"termid":"GO:0046784"}


id: PBO:0058037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4258","termid":"PBO:0058037"}


id: PBO:0085688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recovery from pheromone-induced cell cycle arrest; acts in a Far1p-independent pathway; interacts with Far3p, Far8p, Far9p, Far10p, and Far11p; protein abundance increases in response to DNA replication stress","termid":"PBO:0085688"}


id: PBO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 31","termid":"PBO:0047391"}


id: PBO:0030170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_strand_displacement","termid":"PBO:0030170"}


id: PBO:0031698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_fusion_during_mating","termid":"PBO:0031698"}


id: PBO:0045470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D5 pseudogene 2","termid":"PBO:0045470"}


id: PBO:0050953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma","termid":"PBO:0050953"}


id: GO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the intramembrane proteolysis of a signal peptide, following its removal from a preprotein.","definition_xrefs":["PMID:12077416"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptide peptidase activity (obsolete GO:0042499)","synonyms":[{"name":"SPP","type":"exact"},{"name":"signal peptide peptidase activity","type":"exact"}],"termid":"GO:0042499"}


id: PBO:0076237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 6 pseudogene 1","termid":"PBO:0076237"}


id: PBO:0108566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Alb1","termid":"PBO:0108566"}


id: GO:0033659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the structure or function of host cell mitochondria. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:35069483","GOC:pamgo_curators","PMID:37175745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host mitochondrion","synonyms":[{"name":"disruption by symbiont of host mitochondrion","type":"exact"},{"name":"modification by symbiont of host mitochondrion","type":"related"}],"termid":"GO:0033659"}


id: PBO:0087923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that recruits Mediator and Swi/Snf complexes; activates transcription of genes expressed at the M/G1 phase boundary and in G1 phase; required for expression of the HO gene controlling mating type switching; localization to nucleus occurs during G1 and appears to be regulated by phosphorylation by Cdc28p kinase; SWI5 has a paralog, ACE2, that arose from the whole genome duplication","termid":"PBO:0087923"}


id: PBO:0002743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human AMSH/STAMBP protein homolog, ubiquitin specific-protease","termid":"PBO:0002743"}


id: _global:adjacent_to
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A geometric operator, specified in Egenhofer 1989. Two features meet if they share a junction on the sequence. X adjacent_to Y iff X and Y share a boundary but do not overlap.","definition_xrefs":["SO:ke","PMID:20226267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"spatially_disjoint_from","termid":"_global:spatially_disjoint_from"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adjacent_to","secondary_identifiers":["RO:0002220"],"synonyms":[{"name":"adjacent to","type":"exact"}],"termid":"_global:adjacent_to"}


id: FYECO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Both M-factor and P-factor, endogenously produced by cells, were present in the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000055 M and P factor produced (obsolete FYECO:0000055)","synonyms":[{"name":"presence of M-factor and P-factor","type":"exact"},{"name":"presence of mating pheromones","type":"exact"}],"termid":"FYECO:0000055"}


id: PBO:0027375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_condensed_chromosomes,_septated_cell_with_1C_DNA_content_per_nucleus","termid":"PBO:0027375"}


id: GO:0019131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal tripeptide from a polypeptide; requires acid pH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tripeptidyl-peptidase I activity (obsolete GO:0019131)","synonyms":[{"name":"tripeptidyl aminopeptidase activity","type":"broad"},{"name":"tripeptidyl peptidase activity","type":"broad"},{"name":"tripeptidyl-peptidase I activity","type":"exact"}],"termid":"GO:0019131"}


id: PBO:0080345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 109 pseudogene","termid":"PBO:0080345"}


id: PBO:0074345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4","termid":"PBO:0074345"}


id: PBO:0074169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member G6","termid":"PBO:0074169"}


id: FYPO:0001103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of hydrogen peroxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to hydrogen peroxide","synonyms":[{"name":"resistance to H2O2","type":"exact"},{"name":"resistance to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"resistance to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"resistant to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001103"}


id: PBO:0052981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactamase beta like 1","termid":"PBO:0052981"}


id: PBO:0017708
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae BET2","termid":"PBO:0017708"}


id: GO:0080059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-arabinose + a flavonol = UDP + a flavonol 3-O-D-arabinoside.","definition_xrefs":["PMID:18757557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"arabinosyltransferase activity","termid":"GO:0052636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"flavonol 3-O-arabinosyltransferase activity","termid":"GO:0080059"}


id: PBO:0087095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L9B; homologous to mammalian ribosomal protein L9 and bacterial L6; RPL9B has a paralog, RPL9A, that arose from a single-locus duplication","termid":"PBO:0087095"}


id: GO:0000160
data:
  {"annotated_genes":["SJAG_00331","SJAG_06592","SJAG_00318","SJAG_01587","SJAG_02498","SJAG_02183","SJAG_00256","SJAG_02472"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65549,65772,68472,87180,91303,107971,108629,114453],"is_not":false,"summary":null,"term":"GO:0000160"}]},"cv_name":"biological_process","definition":"A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.","definition_xrefs":["PMID:9191038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00318":null,"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null,"SJAG_02472":null,"SJAG_02498":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phosphorelay signal transduction system","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"histidyl-aspartyl phosphorelay","type":"exact"}],"termid":"GO:0000160","terms_by_termid":{"GO:0000160":null}}


id: PBO:0029335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_phosphorylation","termid":"PBO:0029335"}


id: PBO:0049523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Q variant histone 1, pseudogene","termid":"PBO:0049523"}


id: PBO:0060428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic acid binding protein 1","termid":"PBO:0060428"}


id: PBO:0043746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7B2","termid":"PBO:0043746"}


id: PBO:0004228
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.27.9","termid":"PBO:0004228"}


id: SO:0000667
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of one or more nucleotides added between two adjacent nucleotides in the sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion","secondary_identifiers":["SO:1000034","loinc:LA6687-3"],"synonyms":[{"name":"insertion","type":"exact"},{"name":"nucleotide insertion","type":"exact"},{"name":"nucleotide_insertion","type":"exact"}],"termid":"SO:0000667"}


id: GO:0010512
data:
  {"annotated_genes":["SJAG_03170","SJAG_00053"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86439,100492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol.","definition_xrefs":["GOC:vw","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010511"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"negatively_regulates","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010512","terms_by_termid":{"GO:1902647":null}}


id: GO:0050567
data:
  {"annotated_genes":["SJAG_01577","SJAG_02721","SJAG_05560"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92726,107434,114571],"is_not":false,"summary":null,"term":"GO:0050567"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + glutamyl-tRNA(Gln) + ATP = L-glutamate + glutaminyl-tRNA(Gln) + phosphate + ADP.","definition_xrefs":["EC:6.3.5.7","MetaCyc:6.3.5.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01577":null,"SJAG_02721":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0140098","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0017068","RHEA:17521","GO:0008264","Wikipedia:Glutaminyl-tRNA_synthase_(glutamine-hydrolysing)"],"synonyms":[{"name":"Glu-AdT activity","type":"related"},{"name":"Glu-tRNA(Gln) amidotransferase activity","type":"related"},{"name":"Glu-tRNAGln amidotransferase activity","type":"related"},{"name":"Glu-tRNAGln:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"glutaminyl-tRNA synthase (glutamine-hydrolysing)","type":"related"},{"name":"glutamyl-tRNA(Gln) amidotransferase activity","type":"related"},{"name":"glutamyl-tRNAGln amidotransferase activity","type":"related"},{"name":"glutamyl-tRNAGln:L-glutamine amido-ligase (ADP-forming)","type":"related"}],"termid":"GO:0050567","terms_by_termid":{"GO:0050567":null}}


id: GO:1990889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone H4 in which the lysine residue at position 20 has been modified by trimethylation.","definition_xrefs":["PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated histone binding","termid":"GO:0035064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"H4K20me3 modified histone binding","termid":"GO:1990889"}


id: PBO:0046715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 1","termid":"PBO:0046715"}


id: PATO:0000927
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to being sensitivity to the action of radiant energy.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photosensitivity","termid":"PATO:0000927"}


id: PBO:0061590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophic receptor tyrosine kinase 1","termid":"PBO:0061590"}


id: FYPO:0002808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 6,7-dimethyl-8-ribityllumazine synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal 6,7-dimethyl-8-ribityllumazine synthase activity","termid":"FYPO:0002808"}


id: GO:0062181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catatlysis of the reaction: calcitriol + 2 H+ + O2 + 2 reduced [adrenodoxin] = 1alpha,23S,25-trihydroxycholecalciferol + H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:30205156","PMID:22100522","RHEA:49192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1-alpha,25-dihydroxyvitamin D3 23-hydroxylase activity","termid":"GO:0062181"}


id: PBO:0030600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_vacuole","termid":"PBO:0030600"}


id: FYPO:0000664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a specified catalytic activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished catalytic activity","synonyms":[{"name":"catalytic activity abolished","type":"exact"}],"termid":"FYPO:0000664"}


id: PBO:0054249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1632","termid":"PBO:0054249"}


id: PBO:0054542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1942","termid":"PBO:0054542"}


id: GO:0031141
data:
  {"annotated_genes":["SJAG_03735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94498],"is_not":false,"summary":null,"term":"GO:0031141"}]},"cv_name":"biological_process","definition":"The process in which a cell initiates conjugation with cellular fusion upon carbon starvation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of conjugation upon nutrient starvation","termid":"GO:0031140"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03735":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"induction of conjugation upon carbon starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031141","terms_by_termid":{"GO:0031141":null}}


id: PBO:0069271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 527, pseudogene","termid":"PBO:0069271"}


id: GO:0021554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the optic nerve over time, from its formation to the mature structure. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","GOC:dph","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve development","synonyms":[{"name":"CN II development","type":"related"},{"name":"cranial nerve 2 development","type":"exact"},{"name":"cranial nerve II development","type":"exact"}],"termid":"GO:0021554"}


id: MOD:01143
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues and the tetrapyrrole compound 15,16-dihydrobiliverdin.","definition_xrefs":["PubMed:3208761","PubMed:8420941","PubMed:2222853","PubMed:1559975","RESID:AA0429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15,16-dihydrobiliverdin-bis-L-cysteine","synonyms":[{"name":"(16R)-8,12-bis(2-carboxyethyl)-3-[2-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-18-[(1Xi)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,7,13,17-tetramethyl-15,16-dihydrobilin-1,19(21H,24H)-dione","type":"exact"},{"name":"15,16-Dhbv","type":"exact"},{"name":"15,16-dihydrobiliverdin IXalpha","type":"exact"},{"name":"15,16-dihydrobiliverdin cysteine adduct","type":"exact"},{"name":"15,16-dihydrobiliverdin-bis-L-cysteine","type":"exact"},{"name":"3'',18'-biscysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"3beta,18alpha-biscysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"8,12-bis(2-carboxyethyl)-3-(2-(cysteinyl-S)-ethyl)-18-(1-(cysteinyl-S)-ethyl)-2,7,13,17-tetramethylbiladiene-ab-1,19(16H,21H)-dione","type":"exact"},{"name":"BINDING  15,16-dihydrobiliverdin (covalent; via 2 links)","type":"exact"},{"name":"DBV","type":"exact"}],"termid":"MOD:01143"}


id: PBO:0050491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B1","termid":"PBO:0050491"}


id: GO:0031623
data:
  {"annotated_genes":["SJAG_03250"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72054],"is_not":false,"summary":null,"term":"GO:0031623"}]},"cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the movement of receptors from the plasma membrane to the inside of the cell. The process begins when cell surface receptors are monoubiquitinated following ligand-induced activation. Receptors are subsequently taken up into endocytic vesicles from where they are either targeted to the lysosome or vacuole for degradation or recycled back to the plasma membrane.","definition_xrefs":["GOC:mah","GOC:signaling","PMID:19643732","PMID:15006537","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03250":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"receptor internalization","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031623","terms_by_termid":{"GO:0031623":null}}


id: PBO:0114082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, predicted GPI anchor, possible peptidase","termid":"PBO:0114082"}


id: GO:0102003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (11Z,14Z)-icosadienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (8Z,11Z,14Z)-icosatrienoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O or an (11Z,14Z,17Z)-icosatrienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (8Z,11Z,14Z,17Z)-eicosatetraenoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["EC:1.14.19.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-lipid (11-3)-desaturase activity","synonyms":[{"name":"Delta(8)-desaturase","type":"exact"},{"name":"Delta8-sphingolipid desaturase activity","type":"exact"},{"name":"acyl-lipid 8-desaturase","type":"exact"}],"termid":"GO:0102003"}


id: GO:0045580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte differentiation","termid":"GO:0045619"},{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"regulates","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell differentiation","synonyms":[{"name":"regulation of T cell development","type":"related"},{"name":"regulation of T lymphocyte differentiation","type":"exact"},{"name":"regulation of T-cell differentiation","type":"exact"},{"name":"regulation of T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045580"}


id: FYPO:0002697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of methylenetetrahydrofolate reductase (NADPH) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased methylenetetrahydrofolate reductase (NADPH) activity","synonyms":[{"name":"reduced methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"}],"termid":"FYPO:0002697"}


id: GO:0034896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-formiminopyruvate + H2O = 3-formylpyruvate + HN3.","definition_xrefs":["UM-BBD_reactionID:r1400"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-formiminopyruvate hydrolase activity (obsolete GO:0034896)","termid":"GO:0034896"}


id: GO:0009415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water","synonyms":[{"name":"response to water stimulus","type":"exact"}],"termid":"GO:0009415"}


id: PBO:0048134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin pseudogene 2","termid":"PBO:0048134"}


id: FYPO:0007599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is increased at a site where silencing can be triggered by the ectopic tethering of a protein.","definition_xrefs":["PMID:23613586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased chromatin silencing at ectopic tethering site","synonyms":[{"name":"increased chromatin silencing at ectopic tethering site","type":"related"},{"name":"increased chromatin silencing at ectopic tethering site during vegetative growth","type":"exact"}],"termid":"FYPO:0007599"}


id: PBO:0075474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 25","termid":"PBO:0075474"}


id: PBO:0027023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_punctate_nuclear_protein_localization,_with_protein_distributed_in_nucleus","termid":"PBO:0027023"}


id: GO:0005516
data:
  {"annotated_genes":["SJAG_02858","SJAG_04498","SJAG_02249","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72186,74085,76246,78340],"is_not":false,"summary":null,"term":"GO:0005516"}]},"cv_name":"molecular_function","definition":"Binding to calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02249":null,"SJAG_02858":null,"SJAG_03631":null,"SJAG_04498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"calmodulin binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005516","terms_by_termid":{"GO:0005516":null}}


id: PBO:0038974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A3 receptor","termid":"PBO:0038974"}


id: GO:0098818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that hyerpolarizes a postsynaptic membrane relative to its resting potential. This has an inhibitory effect on the post-synaptic cell, moving the membrane potential away from the firing threshold.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane potential","termid":"GO:0060078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyperpolarization of postsynaptic membrane","termid":"GO:0098818"}


id: PBO:0046504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F1-regulated inhibitor of cell death","termid":"PBO:0046504"}


id: PBO:0085789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; almost completely overlaps verified ORF RCO1/YMR075W","termid":"PBO:0085789"}


id: GO:0015990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons against an electrochemical gradient, using energy from electron transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy coupled proton transmembrane transport, against electrochemical gradient","termid":"GO:0015988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"electron transport coupled proton transport","termid":"GO:0015990"}


id: PR:Q9Y7Z1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop16 gene.","definition_xrefs":["UniProtKB:Q9Y7Z1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.10","synonyms":[{"name":"Spom972h-nop16","type":"exact"}],"termid":"PR:Q9Y7Z1"}


id: PBO:0049364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 23","termid":"PBO:0049364"}


id: GO:0039715
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A viral factory located in the nucleus of a host cell.","definition_xrefs":["VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral factory","termid":"GO:0039713"},{"relation_name":"part_of","term_name":"host cell nucleus","termid":"GO:0042025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nuclear viral factory","termid":"GO:0039715"}


id: PBO:0061551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5C3A pseudogene 1","termid":"PBO:0061551"}


id: PBO:0073213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssemaphorin 4F","termid":"PBO:0073213"}


id: PBO:0080547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 6","termid":"PBO:0080547"}


id: GO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reversible reaction: (R,R)-butane-2,3-diol + NAD+ = (R)-acetoin + NADH + H+.","definition_xrefs":["EC:1.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R,R)-butanediol dehydrogenase activity","secondary_identifiers":["RHEA:24340","MetaCyc:RR-BUTANEDIOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(R)-2,3-butanediol dehydrogenase activity","type":"related"},{"name":"(R)-diacetyl reductase activity","type":"related"},{"name":"1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"1-amino-2-propanol oxidoreductase activity","type":"related"},{"name":"2,3-butanediol dehydrogenase activity","type":"related"},{"name":"D-(-)-butanediol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol:NAD(2) oxidoreductase activity","type":"related"},{"name":"D-aminopropanol dehydrogenase activity","type":"related"},{"name":"D-butanediol dehydrogenase activity","type":"related"},{"name":"aminopropanol oxidoreductase activity","type":"related"},{"name":"butylene glycol dehydrogenase activity","type":"related"},{"name":"butyleneglycol dehydrogenase activity","type":"related"},{"name":"diacetyl (acetoin) reductase activity","type":"related"}],"termid":"GO:0000721"}


id: PBO:0043515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 4","termid":"PBO:0043515"}


id: PR:Q9UU85
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk38 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.02","synonyms":[{"name":"Spom972h-ppk38","type":"exact"}],"termid":"PR:Q9UU85"}


id: PBO:0061883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPA1 mitochondrial dynamin like GTPase","termid":"PBO:0061883"}


id: GO:1900658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellamide biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"emericellamide biosynthetic process","termid":"GO:1900557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of emericellamide biosynthetic process","synonyms":[{"name":"regulation of emericellamide anabolism","type":"exact"},{"name":"regulation of emericellamide biosynthesis","type":"exact"},{"name":"regulation of emericellamide formation","type":"exact"},{"name":"regulation of emericellamide synthesis","type":"exact"}],"termid":"GO:1900658"}


id: PBO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.78","termid":"PBO:0001364"}


id: PBO:0090884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex tRNA uridine(34) acetyltransferase subunit Elp3","termid":"PBO:0090884"}


id: PBO:0076128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine/tyrosine interacting like 2","termid":"PBO:0076128"}


id: FYPO:0003556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the termination of RNA transcription from a DNA template is abnormal.","definition_xrefs":["GO:0006353","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription during vegetative growth","termid":"FYPO:0004064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abnormal transcription termination","synonyms":[{"name":"abnormal DNA-templated transcription, termination","type":"exact"},{"name":"abnormal termination of transcription","type":"exact"},{"name":"abnormal transcription termination during mitotic cell cycle","type":"related"},{"name":"abnormal transcription termination during vegetative growth","type":"exact"}],"termid":"FYPO:0003556"}


id: GO:0141090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein phospho-serine + inositol 5-triphosphate pentakisphosphate = protein diphospho-serine + inositol 5-diphosphate pentakisphosphate.","definition_xrefs":["PMID:36603579","RHEA:64104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein serine pyrophosphorylase activity","synonyms":[{"name":"protein serine pyrophosphatase activity","type":"related"}],"termid":"GO:0141090"}


id: PBO:0047927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(p13)","termid":"PBO:0047927"}


id: GO:0052575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a carbohydrate is transported to, or maintained in, a specific location. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule localization","termid":"GO:0033036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"carbohydrate localization","synonyms":[{"name":"carbohydrate localisation","type":"exact"}],"termid":"GO:0052575"}


id: PBO:0071893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 31","termid":"PBO:0071893"}


id: PBO:0044796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 9, pseudogene","termid":"PBO:0044796"}


id: _global:colocalizes_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a colocalizes_with b if and only if  a is transiently or peripherally associated with b[GO].","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"_global:mereotopologically_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colocalizes_with","secondary_identifiers":["RO:0002325"],"termid":"_global:colocalizes_with"}


id: PBO:0027343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_primase_activity","termid":"PBO:0027343"}


id: FYPO:0007744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prophase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"spindle collapse during meiotic prophase I","synonyms":[{"name":"broken meiotic spindle during prophase I","type":"related"},{"name":"meiotic spindle breakage during prophase I","type":"exact"},{"name":"spindle collapse during prophase I of meiotic cell cycle","type":"related"},{"name":"spindle collapse during prophase of meiosis I","type":"exact"}],"termid":"FYPO:0007744"}


id: PBO:0052776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 68","termid":"PBO:0052776"}


id: PBO:0058041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4262","termid":"PBO:0058041"}


id: PBO:0029062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vacuoles_during_stationary_phase","termid":"PBO:0029062"}


id: GO:0034326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a butanoyl (CH3-[CH2]2-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"butanoyltransferase activity","termid":"GO:0034326"}


id: PBO:0068859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 99, pseudogene","termid":"PBO:0068859"}


id: MOD:01164
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a riboflavin phosphate (flavin mononucleotide, FMN) group through a phosphodiester bond.","definition_xrefs":["Unimod:442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin-phosphoryl","synonyms":[{"name":"FMN","type":"related"},{"name":"O3-(riboflavin phosphoryl)","type":"related"}],"termid":"MOD:01164"}


id: PBO:0082016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZW10 interacting kinetochore protein","termid":"PBO:0082016"}


id: PBO:0039835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 5","termid":"PBO:0039835"}


id: PBO:0013753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciclin domain protein Fsc1","termid":"PBO:0013753"}


id: PBO:0111300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-associated protein, possibly RNA pol II CTD binding via CID domain","termid":"PBO:0111300"}


id: GO:1901286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving iron-sulfur-molybdenum cofactor.","definition_xrefs":["GOC:yaf","UniPathway:UPA00782","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iron-sulfur-molybdenum cofactor metabolic process","synonyms":[{"name":"FeMo-co metabolic process","type":"exact"},{"name":"FeMo-co metabolism","type":"exact"},{"name":"iron-molybdenum cofactor metabolic process","type":"exact"},{"name":"iron-molybdenum cofactor metabolism","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor metabolism","type":"exact"}],"termid":"GO:1901286"}


id: GO:0071398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fatty acid","termid":"GO:0071398"}


id: GO:0016847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) = 1-aminocyclopropane-1-carboxylate + S-methyl-5'-thioadenosine + H+.","definition_xrefs":["EC:4.4.1.14","RHEA:21744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate synthase activity","secondary_identifiers":["KEGG_REACTION:R00179","GO:0034100","MetaCyc:4.4.1.14-RXN"],"synonyms":[{"name":"1-aminocyclopropane-1-carboxylate synthetase activity","type":"related"},{"name":"1-aminocyclopropane-1-carboxylic acid synthase activity","type":"related"},{"name":"1-aminocyclopropanecarboxylate synthase activity","type":"related"},{"name":"ACC synthase activity","type":"related"},{"name":"L-VG deaminase activity","type":"related"},{"name":"L-vinylglycine deaminase activity","type":"related"},{"name":"S-adenosyl-L-methionine methylthioadenosine-lyase (1-aminocyclopropane-1-carboxylate-forming)","type":"related"},{"name":"S-adenosyl-L-methionine methylthioadenosine-lyase activity","type":"related"},{"name":"aminocyclopropanecarboxylate synthase activity","type":"related"},{"name":"aminocyclopropanecarboxylic acid synthase activity","type":"related"}],"termid":"GO:0016847"}


id: PBO:0047655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 7","termid":"PBO:0047655"}


id: PBO:0028802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0028802"}


id: GO:0035676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an anterior lateral line neuromast hair cell over time, from its formation to the mature structure. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["ISBN:0125296509","ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell development","termid":"GO:0035675"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast hair cell differentiation","termid":"GO:0048903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast hair cell development","termid":"GO:0035676"}


id: PR:000027570
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PMID:11242054","PMID:20929775","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.1","termid":"PR:000027569"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"SPAC1834.04","type":"related"},{"name":"Spom-hht1","type":"exact"}],"termid":"PR:000027570"}


id: GO:0004648
data:
  {"annotated_genes":["SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88239],"is_not":false,"summary":null,"term":"GO:0004648"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + 2-oxoglutarate = 3-phosphonooxypyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"O-phospho-L-serine:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14329","GO:0004646","MetaCyc:PSERTRANSAM-RXN","Reactome:R-HSA-977333"],"synonyms":[{"name":"PdxC","type":"related"},{"name":"PSAT activity","type":"related"},{"name":"3-O-phospho-L-serine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"3-phosphoserine aminotransferase activity","type":"related"},{"name":"3PHP transaminase activity","type":"related"},{"name":"L-phosphoserine aminotransferase activity","type":"related"},{"name":"SerC","type":"related"},{"name":"hydroxypyruvic phosphate--glutamic transaminase activity","type":"related"},{"name":"phosphohydroxypyruvate transaminase activity","type":"related"},{"name":"phosphohydroxypyruvic--glutamic transaminase activity","type":"related"},{"name":"phosphoserine aminotransferase activity","type":"broad"},{"name":"phosphoserine transaminase activity","type":"broad"}],"termid":"GO:0004648","terms_by_termid":{"GO:0004648":null}}


id: PBO:0075644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty RTK signaling antagonist 3","termid":"PBO:0075644"}


id: PBO:0005300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA guanylyltransferase (predicted)","termid":"PBO:0005300"}


id: PBO:0039429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anomalous homeobox","termid":"PBO:0039429"}


id: FYPO:0006287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during cellular response to hydroxyurea (obsolete FYPO:0006287)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to HU","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein tyrosine phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006287"}


id: PBO:0036277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nebulin-family actin filament anchoring protein Cyk3 (predicted)","termid":"PBO:0036277"}


id: GO:0051611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the monoamine neurotransmitter serotonin into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"regulates","term_name":"serotonin uptake","termid":"GO:0051610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of serotonin uptake","synonyms":[{"name":"regulation of 5-HT uptake","type":"exact"},{"name":"regulation of 5-hydroxytryptamine uptake","type":"exact"},{"name":"regulation of 5HT uptake","type":"exact"},{"name":"regulation of serotonin import","type":"exact"}],"termid":"GO:0051611"}


id: PBO:0049299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 2 pseudogene 1","termid":"PBO:0049299"}


id: PBO:0059730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 4","termid":"PBO:0059730"}


id: GO:1900684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumonisin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of fumonisin biosynthetic process","termid":"GO:1900683"},{"relation_name":"negatively_regulates","term_name":"fumonisin biosynthetic process","termid":"GO:1900541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fumonisin biosynthetic process","synonyms":[{"name":"down regulation of fumonisin anabolism","type":"exact"},{"name":"down regulation of fumonisin biosynthesis","type":"exact"},{"name":"down regulation of fumonisin biosynthetic process","type":"exact"},{"name":"down regulation of fumonisin formation","type":"exact"},{"name":"down regulation of fumonisin synthesis","type":"exact"},{"name":"down-regulation of fumonisin anabolism","type":"exact"},{"name":"down-regulation of fumonisin biosynthesis","type":"exact"},{"name":"down-regulation of fumonisin biosynthetic process","type":"exact"},{"name":"down-regulation of fumonisin formation","type":"exact"},{"name":"down-regulation of fumonisin synthesis","type":"exact"},{"name":"downregulation of fumonisin anabolism","type":"exact"},{"name":"downregulation of fumonisin biosynthesis","type":"exact"},{"name":"downregulation of fumonisin biosynthetic process","type":"exact"},{"name":"downregulation of fumonisin formation","type":"exact"},{"name":"downregulation of fumonisin synthesis","type":"exact"},{"name":"inhibition of fumonisin anabolism","type":"exact"},{"name":"inhibition of fumonisin biosynthesis","type":"exact"},{"name":"inhibition of fumonisin biosynthetic process","type":"narrow"},{"name":"inhibition of fumonisin formation","type":"exact"},{"name":"inhibition of fumonisin synthesis","type":"exact"},{"name":"negative regulation of fumonisin anabolism","type":"exact"},{"name":"negative regulation of fumonisin biosynthesis","type":"exact"},{"name":"negative regulation of fumonisin formation","type":"exact"},{"name":"negative regulation of fumonisin synthesis","type":"exact"}],"termid":"GO:1900684"}


id: PBO:0047939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(13)(q21.2)","termid":"PBO:0047939"}


id: GO:0060732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol phosphate biosynthetic process","termid":"GO:0010919"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of inositol phosphate biosynthetic process","termid":"GO:0060732"}


id: PBO:0050373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 76","termid":"PBO:0050373"}


id: PBO:0091975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, probable 3'UTR of ptc2","termid":"PBO:0091975"}


id: GO:0051140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer T cell proliferation.","definition_xrefs":["ISBN:0781735149","PMID:12154375","PMID:9133426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"is_a","term_name":"regulation of NK T cell activation","termid":"GO:0051133"},{"relation_name":"regulates","term_name":"NK T cell proliferation","termid":"GO:0001866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NK T cell proliferation","synonyms":[{"name":"regulation of NK T lymphocyte proliferation","type":"exact"},{"name":"regulation of NK T-cell proliferation","type":"exact"},{"name":"regulation of NK T-lymphocyte proliferation","type":"exact"},{"name":"regulation of NKT cell proliferation","type":"exact"},{"name":"regulation of NT cell proliferation","type":"exact"},{"name":"regulation of natural T cell proliferation","type":"exact"},{"name":"regulation of natural killer T cell proliferation","type":"exact"}],"termid":"GO:0051140"}


id: GO:0032925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of any activin receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"regulates","term_name":"activin receptor signaling pathway","termid":"GO:0032924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of activin receptor signaling pathway","synonyms":[{"name":"regulation of activin receptor signalling pathway","type":"exact"},{"name":"regulation of activin signaling pathway","type":"related"},{"name":"regulation of activin signalling pathway","type":"related"}],"termid":"GO:0032925"}


id: GO:0043407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of MAP kinase activity.","definition_xrefs":["GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAP kinase activity","termid":"GO:0043405"},{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of MAP kinase activity","synonyms":[{"name":"down regulation of MAPK activity","type":"exact"},{"name":"down-regulation of MAPK activity","type":"exact"},{"name":"downregulation of MAPK activity","type":"exact"},{"name":"inhibition of MAPK activity","type":"narrow"},{"name":"negative regulation of mitogen activated protein kinase activity","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase activity","type":"exact"}],"termid":"GO:0043407"}


id: FYPO:0007373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of histones in silent mating-type cassettes is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"abnormal histone methylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal histone methylation at silent mating-type cassette during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007373"}


id: PBO:0061954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 7","termid":"PBO:0061954"}


id: PR:000027545
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A that is a translation product of the yeast HTA2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.2","synonyms":[{"name":"H2A.2","type":"exact"},{"name":"H2A2","type":"related"},{"name":"HTA2","type":"exact"}],"termid":"PR:000027545"}


id: PATO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disfunctional quality held by the bearer when the latter is unable to perform a regular function(s).","definition_xrefs":["PATC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-functional","secondary_identifiers":["PATO:0001640"],"synonyms":[{"name":"defective","type":"related"},{"name":"disfunctional","type":"exact"},{"name":"failure","type":"related"},{"name":"functional failure","type":"exact"}],"termid":"PATO:0001511"}


id: GO:0016640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a cytochrome molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.4.2.-"],"termid":"GO:0016640"}


id: GO:0036085
data:
  {"annotated_genes":["SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89370],"is_not":false,"summary":null,"term":"GO:0036085"}]},"cv_name":"biological_process","definition":"The directed movement of GDP-fucose into the Golgi lumen. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:sart","PMID:3458237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-fucose transmembrane transport","termid":"GO:0015783"},{"relation_name":"is_a","term_name":"cytosol to Golgi apparatus transport","termid":"GO:0140820"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"GDP-fucose import into Golgi lumen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GDP-fucose import into Golgi","type":"exact"},{"name":"GDP-fucose transport across Golgi membrane","type":"exact"},{"name":"GDP-fucose transport into Golgi lumen","type":"exact"}],"termid":"GO:0036085","terms_by_termid":{"GO:0036085":null}}


id: PBO:0000673
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.29","termid":"PBO:0000673"}


id: PBO:0005846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, unknown biological role","termid":"PBO:0005846"}


id: GO:0016428
data:
  {"annotated_genes":["SJAG_00325","SJAG_02099","SJAG_01314"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86486,86487,89970,89971,101900],"is_not":false,"summary":null,"term":"GO:0016428"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in tRNA + S-adenosyl-L-methionine = a 5-methylcytidine in tRNA + S-adenosyl-L-homocysteine + H+. This modification can occur on seversal residues, including cytidine(34), cytidine(40), cytidine(48), and cytidine(49).","definition_xrefs":["RHEA:61468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (cytidine) methyltransferase activity","termid":"GO:0016427"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_01314":null,"SJAG_02099":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0140101","GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"tRNA (cytidine-5-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6785438","Reactome:R-HSA-6782419","Reactome:R-HSA-8932765","Reactome:R-HSA-6782388","EC:2.1.1.202","Reactome:R-HSA-6785409"],"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"tRNA (cytosine-5-)-methyltransferase activity","type":"exact"},{"name":"transfer RNA cytosine 5-methyltransferase activity","type":"related"},{"name":"transfer ribonucleate cytosine 5-methyltransferase activity","type":"related"}],"termid":"GO:0016428","terms_by_termid":{"GO:0016428":null}}


id: GO:0010078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of root meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"},{"relation_name":"part_of","term_name":"root morphogenesis","termid":"GO:0010015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of root meristem identity","termid":"GO:0010078"}


id: PBO:0083325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF SPT15/YER148W","termid":"PBO:0083325"}


id: PBO:0089666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent chromatin remodeller/ubiquitin-protein ligase E3 Rad8","termid":"PBO:0089666"}


id: PBO:0073917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A6 pseudogene 1","termid":"PBO:0073917"}


id: PBO:0086667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; ORF emerged de novo in thymine-rich ancestral non-genic region, accumulated substantial changes under positive selection, and progressively increased its transmembrane propensity to give rise to a protein that integrates into the endoplasmic reticulum (ER) membrane while retaining potential for adaptive change","termid":"PBO:0086667"}


id: PBO:0113487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator; functions primarily as a transcriptional co-repressor with Cyc8p but can also function as a co-activator, recruiting SWI/SNF and SAGA complexes to promoters; target genes may be uniquely repressed by Tup1p or Cyc8p, subject to redundant repression, or in some cases de-repression of target genes in a tup1 mutant is dependent upon CYC8 and vice versa; establishes a repressive chromatin structure via histone H3/H4 interactions and stabilizing nucleosomes over promoters","termid":"PBO:0113487"}


id: PBO:0047544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 3","termid":"PBO:0047544"}


id: PBO:0046221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 14","termid":"PBO:0046221"}


id: PBO:0079836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-5 netrin receptor B","termid":"PBO:0079836"}


id: MOD:01510
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-117 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01510"}


id: PBO:0088215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter (predicted)","termid":"PBO:0088215"}


id: PBO:0061218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 9","termid":"PBO:0061218"}


id: PBO:0057771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2117","termid":"PBO:0057771"}


id: PBO:0067452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 575, pseudogene","termid":"PBO:0067452"}


id: PBO:0041783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyphosine 2","termid":"PBO:0041783"}


id: FYPO:0007479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the assembly and stable inheritance of heterochromatic structure is normal (i.e. indistinguishable from wild type) in regions of the genome where heterochromatin is normally maintained over successive generations.","definition_xrefs":["PMID:29899117","PMID:31278118","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"normal epigenetic heterochromatin inheritance","synonyms":[{"name":"normal PEV","type":"related"},{"name":"normal epigenetic heterochromatin propagation","type":"exact"},{"name":"normal epigenetic inheritance of heterochromatin","type":"exact"}],"termid":"FYPO:0007479"}


id: PBO:0062074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 5","termid":"PBO:0062074"}


id: PBO:0058679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6807","termid":"PBO:0058679"}


id: PBO:0080908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma","termid":"PBO:0080908"}


id: PBO:0003963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase phi","termid":"PBO:0003963"}


id: GO:0043782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cobalt-precorrin 3 + S-adenosyl-L-methionine = cobalt-precorrin 4 + S-adenosyl-L-homocysteine.","definition_xrefs":["MetaCyc:RXN-8761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cobalt-precorrin-3 C17-methyltransferase activity","secondary_identifiers":["RHEA:26273"],"synonyms":[{"name":"cobalt-precorrin 3 C17-methyltransferase activity","type":"exact"},{"name":"cobalt-precorrin-3 methylase","type":"broad"},{"name":"cobalt-precorrin-3 methyltransferase","type":"broad"},{"name":"cobalt-precorrin-3B C17-methyltransferase activity","type":"exact"}],"termid":"GO:0043782"}


id: SO:0001789
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A specialized region in the genomes of some yeast and fungi, the genes of which regulate mating type.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Mating-type_region"],"synonyms":[{"name":"mating type region","type":"exact"}],"termid":"SO:0001789"}


id: PBO:0057251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 451b","termid":"PBO:0057251"}


id: GO:0004228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of gelatin type I and collagen types IV, V, VII, X. Cleaves the collagen-like sequence Pro-Gln-Gly-Ile-Ala-Gly-Gln at the Gly-Ile bond.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gelatinase A activity (obsolete GO:0004228)","synonyms":[{"name":"3/4 collagenase activity","type":"related"},{"name":"72 kDa gelatinase type A","type":"related"},{"name":"72-kDa gelatinase activity","type":"narrow"},{"name":"MMP 2","type":"related"},{"name":"MMP-2","type":"exact"},{"name":"collagenase IV","type":"related"},{"name":"collagenase type IV","type":"related"},{"name":"gelatinase A activity","type":"exact"},{"name":"matrix metalloproteinase 2 activity","type":"related"},{"name":"matrix metalloproteinase 5","type":"related"},{"name":"type IV collagen metalloproteinase","type":"broad"},{"name":"type IV collagenase activity","type":"related"},{"name":"type IV collagenase/gelatinase activity","type":"related"}],"termid":"GO:0004228"}


