# terms

id: GO:0004953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an icosanoid to initiate a change in cell activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"icosanoid receptor activity","synonyms":[{"name":"eicosanoid receptor activity","type":"exact"}],"termid":"GO:0004953"}


id: FYECO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium containing a high concentration of lactate (>2%) as carbon source, salts and water.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ lactate","termid":"FYECO:0000451"}


id: PBO:0088239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Stm1","termid":"PBO:0088239"}


id: FYPO:0001118
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115347,115335,115542],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001122"},{"annotations":[115614],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[115396,115399,115395,115356],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0000648"},{"annotations":[115456,115461,115467,115493],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"},{"annotations":[115398,115397,115404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[115403,115402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell morphology (i.e. the size, shape, or structure of the cell) is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00266":null,"SJAG_00514":null,"SJAG_01794":null,"SJAG_02013":null,"SJAG_02592":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04332":null,"SJAG_04522":null},"genotype_count":15,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vegetative cell morphology","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00514","SJAG_02819","SJAG_03453","SJAG_00028","SJAG_04522","SJAG_03048","SJAG_04332","SJAG_03581","SJAG_00266","SJAG_04312","SJAG_04280","SJAG_02592","SJAG_02013","SJAG_01794"],"single_locus_genotype_uniquenames":["scd2delta","gef1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","pyp1delta","pka1delta","scd1delta","rga6delta","efc25delta","atf1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","ras1delta","sty1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","rga4delta"],"synonyms":[{"name":"abnormal cell morphology during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001118","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0031370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_vegetative_cell","termid":"PBO:0031370"}


id: PBO:0069159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 411, pseudogene","termid":"PBO:0069159"}


id: GO:0047044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + androstan-3-alpha,17-beta-diol = 17-beta-hydroxyandrostan-3-one + NADH + H+.","definition_xrefs":["RHEA:22400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"androstan-3-alpha,17-beta-diol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.53-RXN","EC:1.1.1.53"],"synonyms":[{"name":"(R)-20-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"20beta-HSD","type":"related"},{"name":"20beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"3-alpha(or 20-beta)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3alpha(or 20beta)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3alpha(or 20beta)-hydroxysteroid:NAD+ oxidoreductase activity","type":"broad"},{"name":"3alpha,20beta-hydroxysteroid:NAD+-oxidoreductase activity","type":"broad"},{"name":"NADH-20beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"cortisone reductase activity","type":"related"},{"name":"dehydrogenase, 20beta-hydroxy steroid","type":"broad"},{"name":"delta4-3-ketosteroid hydrogenase activity","type":"broad"}],"termid":"GO:0047044"}


id: PBO:0064782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1B divergent transcript","termid":"PBO:0064782"}


id: PBO:0086008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; subunit of the leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms a ring-like structure at the leading edge of the prospore membrane during meiosis II; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0086008"}


id: PBO:0039762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APRG1 tumor suppressor candidate","termid":"PBO:0039762"}


id: PBO:0028897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_pear-shaped_vegetative_cell","termid":"PBO:0028897"}


id: GO:0032249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of adenosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"},{"relation_name":"regulates","term_name":"adenosine transport","termid":"GO:0032238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of adenosine transport","termid":"GO:0032249"}


id: PBO:0077902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase gamma 1","termid":"PBO:0077902"}


id: GO:1904055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte proliferation.","definition_xrefs":["GO_REF:0000058","PMID:24434010","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte proliferation","termid":"GO:1904054"},{"relation_name":"negatively_regulates","term_name":"cholangiocyte proliferation","termid":"GO:1990705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholangiocyte proliferation","synonyms":[{"name":"down regulation of cholangiocyte proliferation","type":"exact"},{"name":"down regulation of hepatoblast proliferation","type":"exact"},{"name":"down-regulation of cholangiocyte proliferation","type":"exact"},{"name":"down-regulation of hepatoblast proliferation","type":"exact"},{"name":"downregulation of cholangiocyte proliferation","type":"exact"},{"name":"downregulation of hepatoblast proliferation","type":"exact"},{"name":"inhibition of cholangiocyte proliferation","type":"narrow"},{"name":"inhibition of hepatoblast proliferation","type":"narrow"},{"name":"negative regulation of hepatoblast proliferation","type":"exact"}],"termid":"GO:1904055"}


id: PBO:0070615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 83","termid":"PBO:0070615"}


id: PBO:0057126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 210","termid":"PBO:0057126"}


id: FYPO:0000361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the nucleolus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal nucleolus organization","termid":"FYPO:0000814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleolar morphology","synonyms":[{"name":"abnormal nucleolar morphology during mitotic cell cycle","type":"related"},{"name":"abnormal nucleolar morphology during vegetative growth","type":"exact"},{"name":"nucleolar morphology: abnormal","type":"related"}],"termid":"FYPO:0000361"}


id: GO:0030806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways resulting in the breakdown of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclic nucleotide catabolic process (obsolete GO:0030806)","synonyms":[{"name":"down regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"down-regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"downregulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"inhibition of cyclic nucleotide catabolic process","type":"narrow"},{"name":"negative regulation of cyclic nucleotide breakdown","type":"exact"},{"name":"negative regulation of cyclic nucleotide catabolism","type":"exact"},{"name":"negative regulation of cyclic nucleotide degradation","type":"exact"}],"termid":"GO:0030806"}


id: GO:0060614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate or extent of mammary gland development in the male by an androgen binding to its receptor, causing a change in state or activity of a cell.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mammary gland development in males by androgen receptor signaling pathway (obsolete GO:0060614)","synonyms":[{"name":"negative regulation of mammary gland development in males by androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060614"}


id: PBO:0085559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing GATA family zinc finger motifs; involved in spore wall assembly; sequence similarity to GAT3, and the double mutant gat3 gat4 exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085559"}


id: PBO:0045246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC25-GNG10 readthrough","termid":"PBO:0045246"}


id: PBO:0112987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase required for biogenesis of small ribosomal subunit; conserved 18S rRNA cytosine acetyltransferase that modifies tRNAs assisted by adaptor Tan1p; responsible for incorporation of N4-acetylcytidine into mRNAs; human homolog NAT10 implicated in several types of cancer and premature aging","termid":"PBO:0112987"}


id: GO:0044339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in osteoblast differentiation.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:0044339)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:0044339"}


id: PBO:0088875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol dehydrogenase His2","termid":"PBO:0088875"}


id: PBO:0057985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3911","termid":"PBO:0057985"}


id: PBO:0066413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAD and GEM like GTPase 1","termid":"PBO:0066413"}


id: PATO:0000657
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000657 length_quantity (obsolete PATO:0000657)","termid":"PATO:0000657"}


id: PATO:0001918
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and abdomen of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posteroventral to","termid":"PATO:0001918"}


id: PBO:0001235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain protein","termid":"PBO:0001235"}


id: GO:0021515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the spinal cord. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","PMID:11262869","GOC:cls","GO_REF:0000021","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"spinal cord development","termid":"GO:0021510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation in spinal cord","termid":"GO:0021515"}


id: PBO:0029288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_Mei2_nuclear_dot","termid":"PBO:0029288"}


id: PBO:0031277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-clumped_colony_morphology_(obsolete_FYPO:0000153)","termid":"PBO:0031277"}


id: GO:0018736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-oxo-2-hydroxycyclohexane-1-carboxyl-CoA + H2O = 3-hydroxypimeloyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-oxo-2-hydroxycyclohexane-1-carboxyl-CoA hydrolase activity (obsolete GO:0018736)","termid":"GO:0018736"}


id: PBO:0087236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Separase/separin, a caspase-like cysteine protease; cleaves Mcd1p/Scc1p, a mitotic cohesin complex subunit, resulting in the dissociation of cohesin from chromatin and sister chromatid separation; cleaves meiotic-cohesin subunit Rec8p along chromosome arms in meiosis I and at centromeric sites during meiosis II; inhibits PP2A-Cdc55p to promote mitotic exit; inhibited by Pds1p (securin); relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087236"}


id: GO:1901557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fenofibrate stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fenofibrate","termid":"GO:1901557"}


id: PBO:0054851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2265","termid":"PBO:0054851"}


id: GO:0005827
data:
  {"annotated_genes":["SJAG_00918","SJAG_01224","SJAG_04745","SJAG_02624","SJAG_03073","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90808,95296,97509],"is_not":false,"summary":null,"term":"GO:0005827"},{"annotations":[103627,114311,94691,95294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"}]},"cv_name":"cellular_component","definition":"Any of the spindle microtubules that come from each pole and overlap at the spindle midzone. This interdigitating structure consisting of antiparallel microtubules is responsible for pushing the poles of the spindle apart.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle microtubule","termid":"GO:0005876"},{"relation_name":"part_of","term_name":"spindle pole","termid":"GO:0000922"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01224":null,"SJAG_01613":null,"SJAG_02624":null,"SJAG_03073":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"polar microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pole-to-pole microtubule","type":"exact"}],"termid":"GO:0005827","terms_by_termid":{"GO:0005827":null,"GO:1990537":null}}


id: GO:0071415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a purine-containing compound stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to purine-containing compound","synonyms":[{"name":"cellular response to purine","type":"related"}],"termid":"GO:0071415"}


id: PBO:0048241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12B","termid":"PBO:0048241"}


id: GO:0003318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell toward the midline that contributes to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration to the midline involved in heart development","termid":"GO:0003318"}


id: PBO:0050670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPA5 pseudogene 1","termid":"PBO:0050670"}


id: GO:0070564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vitamin D receptor signaling pathway activity.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin D receptor signaling pathway","termid":"GO:0070562"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"vitamin D receptor signaling pathway","termid":"GO:0070561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of vitamin D receptor signaling pathway","synonyms":[{"name":"activation of vitamin D receptor signaling pathway","type":"narrow"},{"name":"positive regulation of VDR signaling pathway","type":"exact"},{"name":"positive regulation of vitamin D receptor signalling pathway","type":"exact"},{"name":"stimulation of vitamin D receptor signaling pathway","type":"narrow"},{"name":"up regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"up-regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"upregulation of vitamin D receptor signaling pathway","type":"exact"}],"termid":"GO:0070564"}


id: PBO:0090720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic ATP-dependent RNA helicase Dbp5","termid":"PBO:0090720"}


id: PBO:0064439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNRC1 divergent transcript","termid":"PBO:0064439"}


id: PR:Q09874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12G12.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.11c","synonyms":[{"name":"Spom972h-SPAC12G12.11c","type":"exact"}],"termid":"PR:Q09874"}


id: GO:0031398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein ubiquitination","synonyms":[{"name":"activation of protein ubiquitination","type":"narrow"},{"name":"stimulation of protein ubiquitination","type":"narrow"},{"name":"up regulation of protein ubiquitination","type":"exact"},{"name":"up-regulation of protein ubiquitination","type":"exact"},{"name":"upregulation of protein ubiquitination","type":"exact"}],"termid":"GO:0031398"}


id: MOD:02007
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-palmitoleyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-palmitoleylated residue","termid":"MOD:02008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-palmitoleyl-L-lysine","termid":"MOD:02007"}


id: PBO:0073463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein D","termid":"PBO:0073463"}


id: PBO:0049015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6B","termid":"PBO:0049015"}


id: PBO:0036329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exopolyphosphatase, prune (predicted)","termid":"PBO:0036329"}


id: GO:0044864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process where an infecting virus activates or increases the frequency, rate or extent of its host's cell division.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cell division","termid":"GO:0044863"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by virus of host cell division","termid":"GO:0044864"}


id: PBO:0065392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 1","termid":"PBO:0065392"}


id: PBO:0051783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F1","termid":"PBO:0051783"}


id: PBO:0001921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clp1-interacting protein Nsk1","termid":"PBO:0001921"}


id: GO:0051542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of elastin, a fibrous glycoprotein found in elastic tissues such as the walls of arteries.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"},{"relation_name":"is_a","term_name":"elastin metabolic process","termid":"GO:0051541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"elastin biosynthetic process","termid":"GO:0051542"}


id: GO:0032961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of inositol trisphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inositol phosphate biosynthetic process","termid":"GO:0010920"},{"relation_name":"is_a","term_name":"regulation of inositol trisphosphate biosynthetic process","termid":"GO:0032960"},{"relation_name":"negatively_regulates","term_name":"inositol trisphosphate biosynthetic process","termid":"GO:0032959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of inositol trisphosphate biosynthetic process","synonyms":[{"name":"negative regulation of IP3 biosynthesis","type":"exact"},{"name":"negative regulation of IP3 biosynthetic process","type":"exact"},{"name":"negative regulation of inositol trisphosphate anabolism","type":"exact"},{"name":"negative regulation of inositol trisphosphate biosynthesis","type":"exact"},{"name":"negative regulation of inositol trisphosphate formation","type":"exact"},{"name":"negative regulation of inositol trisphosphate synthesis","type":"exact"},{"name":"negative regulation of myo-inositol trisphosphate biosynthesis","type":"narrow"},{"name":"negative regulation of myo-inositol trisphosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032961"}


id: FYPO:0005884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing myxothiazol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on myxothiazol","synonyms":[{"name":"normal cell population growth in presence of myxothiazol","type":"exact"},{"name":"normal cell population growth on MXT","type":"exact"},{"name":"normal cell population growth on myxothiazol","type":"exact"},{"name":"normal vegetative cell population growth on myxothiazol","type":"exact"}],"termid":"FYPO:0005884"}


id: PBO:0081676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 597","termid":"PBO:0081676"}


id: PBO:0034588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_galactose-specific_flocculation","termid":"PBO:0034588"}


id: GO:0019535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ferric-vibriobactin ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ferric-vibriobactin transmembrane transporter activity","termid":"GO:0019535"}


id: PBO:0041257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 216","termid":"PBO:0041257"}


id: GO:0060119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an inner ear receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell development","synonyms":[{"name":"inner ear hair cell development","type":"exact"}],"termid":"GO:0060119"}


id: GO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","secondary_identifiers":["EC:1.10.3.-"],"synonyms":[{"name":"laccase activity","type":"related"}],"termid":"GO:0016682"}


id: GO:2000462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of eukaryotic cell surface binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of eukaryotic cell surface binding (obsolete GO:2000462)","synonyms":[{"name":"positive regulation of eukaryotic cell surface binding","type":"exact"}],"termid":"GO:2000462"}


id: PBO:0078193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-3 (non-functional)","termid":"PBO:0078193"}


id: PBO:0083459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene IFH1","termid":"PBO:0083459"}


id: GO:0102737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + 4-coumaryl-CoA + H2O + 3 malonyl-CoA = 4 coenzyme A + 3 carbon dioxide + p-coumaroyltriacetate.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"p-coumaroyltriacetic acid synthase activity","secondary_identifiers":["MetaCyc:RXN-7577"],"termid":"GO:0102737"}


id: GO:0045095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"keratin filament","synonyms":[{"name":"acidic keratin","type":"related"},{"name":"basic/neutral keratin","type":"related"}],"termid":"GO:0045095"}


id: PBO:0072246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 21","termid":"PBO:0072246"}


id: GO:0043073
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of a germ cell, a reproductive cell in multicellular organisms.","definition_xrefs":["CL:0000586","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"germ cell nucleus","synonyms":[{"name":"germ-cell nucleus","type":"exact"}],"termid":"GO:0043073"}


id: PBO:0067526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 670, pseudogene","termid":"PBO:0067526"}


id: GO:0034406
data:
  {"annotated_genes":["SJAG_01453","SJAG_01288","SJAG_00218","SJAG_03705","SJAG_00610","SJAG_02192","SJAG_01787","SJAG_01290","SJAG_04666","SJAG_04483","SJAG_02222","SJAG_05285","SJAG_00876","SJAG_03123","SJAG_03587","SJAG_01171","SJAG_03646","SJAG_04668","SJAG_05001","SJAG_04462","SJAG_01835","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[87607,102216,103905,109319,87618,84103,105434,111985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98740,104742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[98031,91146,98032,104198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[83556,88443],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[88428,114087,88445,86801,98949,101461],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cell wall beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall beta-glucan metabolism","type":"exact"}],"termid":"GO:0034406","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0043731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative decarboxylation of 6-hydroxynicotinate to 2,5-dihydroxypyridine, dependent on O2, NADH +H+ and FAD.","definition_xrefs":["GOC:jl","PMID:10091591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"6-hydroxynicotinate 3-monooxygenase activity","secondary_identifiers":["RHEA:27333","EC:1.14.13.114","MetaCyc:RXN-7573"],"termid":"GO:0043731"}


id: FYPO:0007901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal.","definition_xrefs":["PMID:29622660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of R-loops","synonyms":[{"name":"increased level of R-loops","type":"exact"},{"name":"increased level of RNA-DNA hybrids","type":"exact"}],"termid":"FYPO:0007901"}


id: PBO:0063106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARK7 pseudogene 2","termid":"PBO:0063106"}


id: PATO:0002403
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Affecting all regions without specificity of distribution.","definition_xrefs":["PATOC:MPTH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"generalized","synonyms":[{"name":"generalised","type":"exact"}],"termid":"PATO:0002403"}


id: GO:0039560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host IRF9 (interferon regulatory factor-9), a transcription factor involved in the innate immune response. For example, viral infection triggers binding of IRF9 to phosphorylated STAT1 and STAT2, forming the ISGF3 complex. The ISGF3 complex migrates to the nucleus and activates transcription of IFN-responsive genes.","definition_xrefs":["PMID:19109390","PMID:10388655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of host IRF9 activity","secondary_identifiers":["VZ:683"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of host IRF9 activity","type":"narrow"},{"name":"inhibition of host IRF9 by virus","type":"narrow"},{"name":"inhibition of host interferon regulatory factor-9 by virus","type":"narrow"},{"name":"suppression by virus of host IRF9 activity","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of host IRF9 activity","type":"narrow"},{"name":"suppression by virus of host interferon regulatory factor 9 activity","type":"narrow"}],"termid":"GO:0039560"}


id: PBO:0084281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the ER; physically interacts with Kre6p; has a role in the synthesis of beta-1,6-glucan in the cell wall; required for cell viability","termid":"PBO:0084281"}


id: GO:0140074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a cardiac endothelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. Endocardial cells (specialized endothelial cells that line the heart) undergo EndMT, and give rise to mesenchymal cells necessary for proper heart development. EndMT, specifically generates valve progenitor cells that give rise to the mitral and tricuspid valves. EndMT also contributes to endocardial cushion formation, as well as to generation of cardiac fibroblasts and smooth muscle cells, but not cardiac myocytes.","definition_xrefs":["GOC:BHF","PMID:16162442","PMID:26053665","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac endothelial to mesenchymal transition","synonyms":[{"name":"EndMT","type":"exact"},{"name":"EndoMT","type":"exact"}],"termid":"GO:0140074"}


id: PR:O74441
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline transporter-like protein ctl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.11c","synonyms":[{"name":"Spom972h-ctl1","type":"exact"}],"termid":"PR:O74441"}


id: PBO:0073872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member C2 (putative)","termid":"PBO:0073872"}


id: GO:0033529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of raffinose, the trisaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose family oligosaccharide biosynthetic process","termid":"GO:0010325"},{"relation_name":"is_a","term_name":"raffinose metabolic process","termid":"GO:0033530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"raffinose biosynthetic process","synonyms":[{"name":"raffinose anabolism","type":"exact"},{"name":"raffinose biosynthesis","type":"exact"},{"name":"raffinose formation","type":"exact"},{"name":"raffinose synthesis","type":"exact"}],"termid":"GO:0033529"}


id: PBO:0016980
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this is not NADH complex associated in yeast, which do not have the other 40 subunits that are present in that complex in mammals, see associated refs for more info on the human protein","termid":"PBO:0016980"}


id: PBO:0042136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholecystokinin B receptor","termid":"PBO:0042136"}


id: PBO:0078792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 15-1","termid":"PBO:0078792"}


id: PATO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A virulence that is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"virulence","termid":"PATO:0002146"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced virulence","synonyms":[{"name":"attenuated","type":"exact"}],"termid":"PATO:0002147"}


id: PBO:0085972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; predicted to contain a single transmembrane domain; mutant has increased aneuploidy tolerance; localized to both the mitochondrial outer membrane and the plasma membrane; protein abundance increases in response to DNA replication stress","termid":"PBO:0085972"}


id: GO:0042543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The glycosylation of protein via peptidyl-arginine, omega-N-glycosyl-L-arginine.","definition_xrefs":["RESID:AA0327"],"gene_count":0,"genotype_count":0,"name":"obsolete protein N-linked glycosylation via arginine (obsolete GO:0042543)","termid":"GO:0042543"}


id: GO:0034111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of homotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"negatively_regulates","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of homotypic cell-cell adhesion","termid":"GO:0034111"}


id: PBO:0072744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7 like 2","termid":"PBO:0072744"}


id: PR:000027526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication regulator sld2 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:11937031","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication regulator sld2","termid":"PR:000027523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drc1/UnMod","pombase_gene_id":"SPAC6B12.11","synonyms":[{"name":"DNA replication regulator drc1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PomBase_original_PRO_term_name: DNA replication regulator sld2 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-SLD2/UnMod","type":"exact"},{"name":"drc1/UnMod","type":"exact"}],"termid":"PR:000027526"}


id: GO:0007463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the R2/R5 photoreceptors commit to their cell fate. R2 and R5 are paired photoreceptors which contribute the outer rhabdomeres.","definition_xrefs":["PMID:3937883","PMID:3076112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor fate commitment","termid":"GO:0001752"},{"relation_name":"part_of","term_name":"R2/R5 cell differentiation","termid":"GO:0048054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R2/R5 cell fate commitment","termid":"GO:0007463"}


id: PATO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality inhering in a bearer by virtue of the bearer's being covered with hair or hairlike projections.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilosity","termid":"PATO:0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hairy","termid":"PATO:0000454"}


id: PBO:0047858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(q31)","termid":"PBO:0047858"}


id: SO:0000781
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute describing sequence that has been integrated with foreign sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgenic","termid":"SO:0000781"}


id: PBO:0082303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asparagine synthetase; catalyzes the synthesis of L-asparagine from L-aspartate in the asparagine biosynthetic pathway; ASN1 has a paralog, ASN2, that arose from the whole genome duplication","termid":"PBO:0082303"}


id: MOD:01754
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01754"}


id: GO:0071260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"},{"relation_name":"is_a","term_name":"cellular response to external stimulus","termid":"GO:0071496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mechanical stimulus","synonyms":[{"name":"cellular mechanical stimulus response","type":"exact"}],"termid":"GO:0071260"}


id: PBO:0087733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the signal recognition particle (SRP); involved in protein targeting to the ER; interacts with Srp54p; homolog of mammalian SRP19","termid":"PBO:0087733"}


id: GO:0050496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-glutamine residues by deamidation and esterification with omega-hydroxyceramide.","definition_xrefs":["PMID:10411887","RESID:AA0347"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-glutamyl 5-omega-hydroxyceramide ester biosynthetic process from peptidyl-glutamine (obsolete GO:0050496)","synonyms":[{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester anabolism from peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester formation from peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester synthesis from peptidyl-glutamine","type":"exact"}],"termid":"GO:0050496"}


id: PBO:0038585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acyltransferase 2","termid":"PBO:0038585"}


id: FYPO:0006031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication begins later than normal.","definition_xrefs":["PMID:28481910","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"delayed onset of mitotic DNA replication initiation","synonyms":[{"name":"delayed mitotic DNA replication initiation","type":"exact"},{"name":"delayed onset of DNA replication initiation during mitotic cell cycle","type":"exact"},{"name":"delayed onset of DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006031"}


id: FYPO:0007290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of UDP-glucose 4-epimerase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal UDP-glucose 4-epimerase activity","termid":"FYPO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased UDP-glucose 4-epimerase activity","synonyms":[{"name":"reduced UDP-glucose 4-epimerase activity","type":"exact"}],"termid":"FYPO:0007290"}


id: GO:0140632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inflammasome complex.","definition_xrefs":["PMID:33542150","PMID:33420033","PMID:33420028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0023052","GO:0044085"],"is_obsolete":false,"name":"canonical inflammasome complex assembly","termid":"GO:0140632"}


id: GO:0019910
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mitochondrial complex of a regulatory and catalytic subunit that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. An example of this component is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","PMID:9395502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045253"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0019910"}


id: PBO:0089405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational activator, zf-CCHC type zinc finger protein","termid":"PBO:0089405"}


id: PBO:0046541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 4","termid":"PBO:0046541"}


id: FYPO:0002072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a prospore has a nucleus in an abnormal location. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"},{"relation_name":"output_of","term_name":"abnormal nucleus positioning in prospore","termid":"FYPO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized nucleus in prospore","synonyms":[{"name":"abnormal nucleus location in prospore","type":"exact"},{"name":"abnormal nucleus position in prospore","type":"exact"},{"name":"displaced nucleus in prospore","type":"exact"},{"name":"displaced nucleus prospore","type":"exact"},{"name":"mislocalised nucleus in prospore","type":"exact"},{"name":"mislocalized nucleus in forespore","type":"exact"},{"name":"mislocalized prospore nucleus","type":"exact"},{"name":"misplaced prospore nuclei","type":"exact"},{"name":"misplaced prospore nucleus","type":"exact"},{"name":"nuclear displacement in prospore","type":"exact"}],"termid":"FYPO:0002072"}


id: PBO:0113080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine aminopeptidase with homocysteine-thiolactonase activity; protects cells against homocysteine toxicity; cytosolic protein, selectively transported to vacuole during nitrogen starvation; targeted to vacuole via CVT pathway; has bleomycin hydrolase activity in vitro; transcription is regulated by galactose via Gal4p; orthologous to human BLMH","termid":"PBO:0113080"}


id: GO:0033149
data:
  {"annotated_genes":["SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70906],"is_not":false,"summary":null,"term":"GO:0033149"}]},"cv_name":"molecular_function","definition":"Binding to a FFAT motif, a short motif containing diphenylalanine in an acidic tract that targets proteins to the cytosolic surface of the ER and to the nuclear membrane by binding directly to members of the VAP (VAMP-associated protein) protein family.","definition_xrefs":["PMID:15455074","PMID:12727870","PMID:16004875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"FFAT motif binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0033149","terms_by_termid":{"GO:0033149":null}}


id: PBO:0041976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 17","termid":"PBO:0041976"}


id: GO:0045218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining the zonula adherens junction, the cell-cell adherens junction formed near the apex of epithelial cells.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction maintenance","termid":"GO:0034334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zonula adherens maintenance","termid":"GO:0045218"}


id: GO:0106173
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a COPII-coated endocytic vesicle.","definition_xrefs":["GOC:pde","PMID:21172817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"COPII-coated vesicle lumen","termid":"GO:0106173"}


id: GO:2000991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of galactomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"galactomannan catabolic process","termid":"GO:0051682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of galactomannan catabolic process","termid":"GO:2000991"}


id: PBO:0029465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_vacuolated_vegetative_cell","termid":"PBO:0029465"}


id: PBO:0057694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1283-2","termid":"PBO:0057694"}


id: GO:0106394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"},{"relation_name":"negatively_regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"negative regulation of palmitic acid catabolic process","termid":"GO:0106394"}


id: PBO:0054374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1768","termid":"PBO:0054374"}


id: PBO:0088987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane anchored ubiquitin C-terminal hydrolase Ubp11","termid":"PBO:0088987"}


id: FYPO:0000966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000965"},{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000966"}


id: GO:0021556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the central nervous system. This process pertains to the initial formation of a structure from unspecified parts. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"central nervous system morphogenesis","termid":"GO:0021551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system formation","termid":"GO:0021556"}


id: PBO:0063461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor C","termid":"PBO:0063461"}


id: PATO:0000981
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000981 relative porosity value (obsolete PATO:0000981)","termid":"PATO:0000981"}


id: GO:0006210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thymine, 5-methyluracil, one of the two major pyrimidine bases present (as thymidine) in DNA but not found in RNA other than (as ribothymidine) in transfer RNA, where it is a minor base.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase catabolic process","termid":"GO:0006208"},{"relation_name":"is_a","term_name":"thymine metabolic process","termid":"GO:0019859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"thymine catabolic process","synonyms":[{"name":"thymine breakdown","type":"exact"},{"name":"thymine catabolism","type":"exact"},{"name":"thymine degradation","type":"exact"}],"termid":"GO:0006210"}


id: FYPO:0004057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intragenic meiotic recombination is increased. Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PomBase:mah","PMID:19436749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased meiotic recombination","termid":"FYPO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased intragenic meiotic recombination","synonyms":[{"name":"increased meiotic intragenic recombination","type":"exact"}],"termid":"FYPO:0004057"}


id: FYPO:0006473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of amino acid biosynthesis genes from RNA polymerase II promoters occurs to a lower extent than normal in response to starvation for one or more amino acids. Amino acid biosynthesis genes are those whose products are involved in amino acid biosynthetic processes.","definition_xrefs":["PomBase:mah","PMID:29432178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription of amino acid biosynthesis genes","termid":"FYPO:0006443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"decreased transcription of amino acid biosynthesis genes in response to amino acid starvation","synonyms":[{"name":"decreased transcription of amino acid biosynthesis genes during cellular response to amino acid starvation","type":"exact"},{"name":"decreased transcription of amino acid biosynthesis genes from RNA pol II promoter in response to amino acid starvation","type":"exact"},{"name":"decreased transcription of amino acid biosynthesis genes in response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"decreased transcription of amino acid biosynthesis genes in response to amino acid starvation during vegetative growth","type":"exact"},{"name":"reduced transcription of amino acid biosynthesis genes in response to amino acid starvation","type":"exact"}],"termid":"FYPO:0006473"}


id: PBO:0064083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PISRT1 lncRNA","termid":"PBO:0064083"}


id: PATO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coordinated","termid":"PATO:0000769"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased coordination","synonyms":[{"name":"low coordination","type":"exact"}],"termid":"PATO:0001860"}


id: PBO:0043680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 7","termid":"PBO:0043680"}


id: PBO:0018134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin Fxn1","termid":"PBO:0018134"}


id: PBO:0114523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone, Clr6 and Rpd3L complex WD repeat subunit Prw1","termid":"PBO:0114523"}


id: PR:A6X992
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16C4.21 gene.","definition_xrefs":["UniProtKB:A6X992","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.21","synonyms":[{"name":"Spom972h-SPCC16C4.21","type":"exact"}],"termid":"PR:A6X992"}


id: PBO:0064281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M2","termid":"PBO:0064281"}


id: PBO:0003989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp7 (predicted)","termid":"PBO:0003989"}


id: PBO:0003036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase Alr2 (predicted)","termid":"PBO:0003036"}


id: PBO:0061147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myc and STAT interactor","termid":"PBO:0061147"}


id: PBO:0003413
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.2.1.6","termid":"PBO:0003413"}


id: PBO:0041649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA2D3 antisense RNA 1","termid":"PBO:0041649"}


id: GO:0036298
data:
  {"annotated_genes":["SJAG_03994","SJAG_02294","SJAG_05280","SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95142,96732,99301,107732],"is_not":false,"summary":null,"term":"GO:0036298"}]},"cv_name":"biological_process","definition":"Removal of a DNA interstrand crosslink (a covalent attachment of DNA bases on opposite strands of the DNA) and restoration of the DNA by a mechanism that involves the exchange, reciprocal or nonreciprocal, of genetic material between the broken DNA molecule and a homologous DNA region.","definition_xrefs":["GOC:vw","PMID:20658649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombinational repair","termid":"GO:0000725"},{"relation_name":"is_a","term_name":"interstrand cross-link repair","termid":"GO:0036297"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01410":null,"SJAG_02294":null,"SJAG_03994":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"recombinational interstrand cross-link repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Fanconi pathway","type":"related"},{"name":"recombination-dependent interstrand cross-link repair","type":"exact"}],"termid":"GO:0036298","terms_by_termid":{"GO:0036298":null}}


id: PR:Q9US14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg82 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized inositol polyphosphate kinase C607.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.04","synonyms":[{"name":"Spom972h-arg82","type":"exact"}],"termid":"PR:Q9US14"}


id: PBO:0043530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordon-bleu WH2 repeat protein like 1","termid":"PBO:0043530"}


id: GO:0032275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of luteinizing hormone, a gonadotropic glycoprotein hormone secreted by the anterior pituitary.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadotropin secretion","termid":"GO:0032274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"luteinizing hormone secretion","termid":"GO:0032275"}


id: PBO:0052220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily V member 1","termid":"PBO:0052220"}


id: FYPO:0001975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing nocodazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on nocodazole","synonyms":[{"name":"normal cell population growth in presence of nocodazole","type":"exact"},{"name":"normal cell population growth on nocodazole","type":"exact"},{"name":"normal cellular response to nocodazole","type":"related"},{"name":"normal vegetative cell population growth on nocodazole","type":"exact"}],"termid":"FYPO:0001975"}


id: GO:0021761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the limbic system over time from its initial formation until its mature state. The limbic system is a collection of structures in the brain involved in emotion, motivation and emotional aspects of memory.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:cls","GOC:dph","ISBN:0878937420","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limbic system development","termid":"GO:0021761"}


id: GO:0043937
data:
  {"annotated_genes":["SJAG_04140","SJAG_04853","SJAG_02169","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[98384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[86759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043938"},{"annotations":[88209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"sporulation","termid":"GO:0043934"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporulation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043937","terms_by_termid":{"GO:0034307":null,"GO:0043938":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0062349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily L member 2 pseudogene","termid":"PBO:0062349"}


id: PBO:0089626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, CCCH-type","termid":"PBO:0089626"}


id: GO:1901315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2A K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2A K63-linked ubiquitination (obsolete GO:1901315)","synonyms":[{"name":"down regulation of histone H2A K63-linked ubiquitination","type":"exact"},{"name":"down-regulation of histone H2A K63-linked ubiquitination","type":"exact"},{"name":"downregulation of histone H2A K63-linked ubiquitination","type":"exact"},{"name":"inhibition of histone H2A K63-linked ubiquitination","type":"narrow"}],"termid":"GO:1901315"}


id: PBO:0084727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein of unknown function; associates with mitochondrial ribosome; localizes to the inner membrane with the C terminus facing the intermembrane space; ortholog of human RMND1, mutation in which is implicated in infantile encephaloneuromyopathy and defective mitochondrial translation","termid":"PBO:0084727"}


id: PBO:0064769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 1","termid":"PBO:0064769"}


id: PBO:0055524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2958","termid":"PBO:0055524"}


id: GO:0120264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent or location of chromosome attachment to the nuclear envelope.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of chromosome attachment to the nuclear envelope","termid":"GO:0120264"}


id: PBO:0057490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 608","termid":"PBO:0057490"}


id: PBO:0064498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B","termid":"PBO:0064498"}


id: SO:0001605
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within a CDS resulting in the gain of an amino acid to the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_insertion","synonyms":[{"name":"amino acid insertion","type":"exact"}],"termid":"SO:0001605"}


id: GO:0180020
data:
  {"annotated_genes":["SJAG_04644","SJAG_05289","SJAG_02177","SJAG_03795","SJAG_03010","SJAG_01848"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104695,104772,111042,112363,114673,114761],"is_not":false,"summary":null,"term":"GO:0180020"}]},"cv_name":"molecular_function","definition":"The activity of bending or deforming a membrane. This activity can occur by multiple mechanisms including the insertion amphipathic domains into one or both leaflets.","definition_xrefs":["PMID:19780639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01848":null,"SJAG_02177":null,"SJAG_03010":null,"SJAG_03795":null,"SJAG_04644":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"membrane bending activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane curving","type":"related"}],"termid":"GO:0180020","terms_by_termid":{"GO:0180020":null}}


id: PBO:0055960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 74A","termid":"PBO:0055960"}


id: PBO:0047603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 2B","termid":"PBO:0047603"}


id: GO:0003036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of hydrogen ions are received and are converted to a molecular signal by chemoreceptors in an aortic body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of pH by chemoreceptor signaling","termid":"GO:0003022"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","termid":"GO:0003033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of pH by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of pH by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003036"}


id: PBO:0112993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenosine 5'-monophosphoramidase; interacts physically and genetically with CDK and TFIIK subunit Kin28p, and genetically with CAK1; member of histidine triad (HIT) superfamily of nucleotide-binding proteins; protein abundance increases in response to DNA replication stress; human homolog HINT1 can complement yeast hnt1 mutant","termid":"PBO:0112993"}


id: PBO:0039129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent in melanoma 2","termid":"PBO:0039129"}


id: GO:0031924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of any of the vitamin B6 compounds, pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"vitamin B6 transmembrane transporter activity","synonyms":[{"name":"vitamin B6 transporter activity","type":"related"}],"termid":"GO:0031924"}


id: PBO:0085776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein necessary for stability of L-A dsRNA-containing particles","termid":"PBO:0085776"}


id: GO:0034434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A lipid modification process in which a sterol ester is formed by the combination of a carboxylic acid (often a fatty acid) and a sterol molecule (e.g. cholesterol).","definition_xrefs":["GOC:rl","GOC:mah","GOC:BHF","GOC:pde"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol esterification (obsolete GO:0034434)","termid":"GO:0034434"}


id: RO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contains","termid":"RO:0001019"}


id: PBO:0042836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP20DC divergent transcript","termid":"PBO:0042836"}


id: GO:0009479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome c that is characteristic of green plants and transfers electrons to plastocyanin.","definition_xrefs":["PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome f (obsolete GO:0009479)","synonyms":[{"name":"cytochrome f","type":"exact"}],"termid":"GO:0009479"}


id: PBO:0077793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topoisomerase I binding, arginine and serine rich like, pseudogene","termid":"PBO:0077793"}


id: PBO:0080201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular zone expressed PH domain containing 1","termid":"PBO:0080201"}


id: PBO:0076057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin like 3","termid":"PBO:0076057"}


id: GO:0005598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any collagen trimer that does not form fibrils and that is relatively short compared to the collagen trimers that do form fibrils.","definition_xrefs":["ISBN:0198599587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"short-chain collagen trimer","termid":"GO:0005598"}


id: PBO:0113787
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huamn UBAP2 ortholog","termid":"PBO:0113787"}


id: PBO:0075975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 1","termid":"PBO:0075975"}


id: GO:0043165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an outer membrane of the type formed in Gram-negative bacteria. This membrane is enriched in polysaccharide and protein, and the outer leaflet of the membrane contains specific lipopolysaccharide structures.","definition_xrefs":["GOC:jl","ISBN:0135712254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"part_of","term_name":"cell envelope organization","termid":"GO:0043163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell outer membrane assembly","synonyms":[{"name":"cell outer membrane biogenesis","type":"related"}],"termid":"GO:0043165"}


id: PBO:0083024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; originally included in genome annotation, but later deleted due to sequence correction","termid":"PBO:0083024"}


id: GO:0070134
data:
  {"annotated_genes":["SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96539],"is_not":false,"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation","termid":"GO:0045948"},{"relation_name":"is_a","term_name":"positive regulation of mitochondrial translation","termid":"GO:0070131"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translational initiation","termid":"GO:0070132"},{"relation_name":"positively_regulates","term_name":"mitochondrial translational initiation","termid":"GO:0070124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial translational initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of mitochondrial translation initiation","type":"exact"}],"termid":"GO:0070134","terms_by_termid":{"GO:0070134":null}}


id: PBO:0004631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase (predicted)","termid":"PBO:0004631"}


id: GO:0036368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes required for a cone photoreceptor to recover, following light activation, so that it can respond to a subsequent light stimulus. Cone recovery requires the shutoff of active participants in the phototransduction cascade, including the visual pigment and downstream signal transducers.","definition_xrefs":["GOC:gap","PMID:16039565","PMID:22802362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cone photoresponse recovery","synonyms":[{"name":"cone phototransduction termination","type":"related"},{"name":"cone response recovery","type":"exact"}],"termid":"GO:0036368"}


id: GO:1904179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adipose tissue development.","definition_xrefs":["PMID:23081848","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of adipose tissue development","termid":"GO:1904177"},{"relation_name":"positively_regulates","term_name":"adipose tissue development","termid":"GO:0060612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adipose tissue development","synonyms":[{"name":"activation of adipogenesis","type":"related"},{"name":"activation of adipose tissue development","type":"narrow"},{"name":"positive regulation of adipogenesis","type":"related"},{"name":"up regulation of adipogenesis","type":"related"},{"name":"up regulation of adipose tissue development","type":"exact"},{"name":"up-regulation of adipogenesis","type":"related"},{"name":"up-regulation of adipose tissue development","type":"exact"},{"name":"upregulation of adipogenesis","type":"related"},{"name":"upregulation of adipose tissue development","type":"exact"}],"termid":"GO:1904179"}


id: GO:0060122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of inner ear receptor cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"part_of","term_name":"inner ear receptor cell development","termid":"GO:0060119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell stereocilium organization","synonyms":[{"name":"inner ear hair cell receptor stereocilium organization","type":"exact"},{"name":"inner ear receptor stereocilium organisation","type":"exact"},{"name":"inner ear receptor stereocilium organization and biogenesis","type":"related"}],"termid":"GO:0060122"}


id: PBO:0028834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_homologous_chromosome_pairing_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028834"}


id: GO:0043732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxynicotinate + H2O + O2 = 2,6-dihydroxynicotinate + H2O2.","definition_xrefs":["RHEA:22808","EC:1.17.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"6-hydroxynicotinate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-7585","KEGG_REACTION:R07221"],"synonyms":[{"name":"6-hydroxynicotinate hydroxylase activity","type":"related"},{"name":"6-hydroxynicotinate:O2 oxidoreductase activity","type":"related"},{"name":"6-hydroxynicotinic acid dehydrogenase activity","type":"related"},{"name":"6-hydroxynicotinic acid hydroxylase activity","type":"related"}],"termid":"GO:0043732"}


id: PBO:0003571
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADhesioN defective","termid":"PBO:0003571"}


id: PBO:0092025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S3","termid":"PBO:0092025"}


id: GO:0045096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A type of intermediate filament.","definition_xrefs":["ISBN:0716731363","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete acidic keratin (obsolete GO:0045096)","synonyms":[{"name":"acidic keratin","type":"exact"},{"name":"type I intermediate filament","type":"exact"}],"termid":"GO:0045096"}


id: PATO:0002357
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a strait side and an arched side giving the bearer the form of the letter D.","definition_xrefs":["PATOC:AE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-shaped","termid":"PATO:0002357"}


id: PBO:0002867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine phosphatase Pyp1","termid":"PBO:0002867"}


id: PBO:0060004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 24","termid":"PBO:0060004"}


id: PBO:0088154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Very long chain fatty acyl-CoA synthetase and fatty acid transporter; activates imported fatty acids with a preference for very long lengths (C20-C26); has a separate function in the transport of long chain fatty acids","termid":"PBO:0088154"}


id: PBO:0004872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor Fkh2","termid":"PBO:0004872"}


id: FYPO:0001655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of histidine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histidine import","synonyms":[{"name":"abnormal L-histidine import","type":"exact"},{"name":"abnormal L-histidine import across plasma membrane","type":"exact"},{"name":"abnormal histidine import during mitotic cell cycle","type":"related"},{"name":"abnormal histidine import during vegetative growth","type":"exact"},{"name":"abnormal histidine import into cell","type":"exact"},{"name":"abnormal histidine uptake","type":"exact"}],"termid":"FYPO:0001655"}


id: PBO:0077996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF1A associated via death domain","termid":"PBO:0077996"}


id: PBO:0060021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 9","termid":"PBO:0060021"}


id: PBO:0058655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6783","termid":"PBO:0058655"}


id: GO:2000817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of histone H3-T3 phosphorylation that is involved in chromosome passenger complex localization to kinetochore.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-T3 phosphorylation involved in chromosome passenger complex localization to kinetochore (obsolete GO:2000817)","synonyms":[{"name":"regulation of histone H3-T3 phosphorylation involved in CPC complex localization to kinetochore","type":"exact"},{"name":"regulation of histone H3-T3 phosphorylation involved in CPC localization to kinetochore","type":"exact"},{"name":"regulation of histone H3-T3 phosphorylation involved in chromosomal passenger complex localization to kinetochore","type":"exact"},{"name":"regulation of histone H3-T3 phosphorylation involved in chromosome passenger complex localisation to kinetochore","type":"related"}],"termid":"GO:2000817"}


id: PBO:0079508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 6","termid":"PBO:0079508"}


id: PBO:0046088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 13","termid":"PBO:0046088"}


id: GO:0071101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to the cell adhesion molecule JAM2.","definition_xrefs":["PMID:12070135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha4-beta1 integrin-JAM2 complex","synonyms":[{"name":"ITGA4-ITGB1-JAM2 complex","type":"narrow"}],"termid":"GO:0071101"}


id: PBO:0065053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 7","termid":"PBO:0065053"}


id: GO:0044754
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of secondary lysosome in which a primary lysosome has fused with the outer membrane of an autophagosome or amphisome. It is involved in the second step of autophagy in which it degrades contents with acidic lysosomal hydrolases.","definition_xrefs":["NIF_Subcellular:sao8444068431","PMID:24657946","GOC:sart","PMID:19008921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary lysosome","termid":"GO:0005767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"autolysosome","synonyms":[{"name":"AVd","type":"exact"},{"name":"degrading autophagic vacuole","type":"exact"}],"termid":"GO:0044754"}


id: PBO:0073597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 histone linker PHD RING helicase","termid":"PBO:0073597"}


id: PBO:0002768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc2p-Noc3p complex subunit Noc2 family (predicted)","termid":"PBO:0002768"}


id: _global:processed_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Inverse of processed_into.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processed_from","termid":"_global:processed_from"}


id: PBO:0081243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 12","termid":"PBO:0081243"}


id: GO:0018973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trinitrotoluene, a methylated benzene molecule with three NO2 groups attached to it. This includes the explosive TNT, 1-methyl-2,4,6-trinitrobenzene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrotoluene metabolic process","termid":"GO:0019326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trinitrotoluene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:tnt"],"synonyms":[{"name":"trinitrotoluene metabolism","type":"exact"}],"termid":"GO:0018973"}


id: GO:1902070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sphingolipid signaling.","definition_xrefs":["PMID:20870412","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of sphingolipid mediated signaling pathway","termid":"GO:1902068"},{"relation_name":"positively_regulates","term_name":"sphingolipid mediated signaling pathway","termid":"GO:0090520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of sphingolipid mediated signaling pathway","synonyms":[{"name":"activation of sphingolipid mediated signaling pathway","type":"narrow"},{"name":"activation of sphingolipid signaling pathway","type":"related"},{"name":"positive regulation of sphingolipid signaling pathway","type":"related"},{"name":"up regulation of sphingolipid mediated signaling pathway","type":"exact"},{"name":"up regulation of sphingolipid signaling pathway","type":"related"},{"name":"up-regulation of sphingolipid mediated signaling pathway","type":"exact"},{"name":"up-regulation of sphingolipid signaling pathway","type":"related"},{"name":"upregulation of sphingolipid mediated signaling pathway","type":"exact"},{"name":"upregulation of sphingolipid signaling pathway","type":"related"}],"termid":"GO:1902070"}


id: PBO:0048823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 8","termid":"PBO:0048823"}


id: PBO:0112513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, UPF0768 family","termid":"PBO:0112513"}


id: GO:1900422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of cellular alcohol catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:3305157","GOC:curators","PMID:8221926"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900422)","synonyms":[{"name":"activation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900422"}


id: PBO:0016992
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin, related to Gsf2","termid":"PBO:0016992"}


id: PBO:0012849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi-associated nuclease Fan1","termid":"PBO:0012849"}


id: PBO:0070483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 18","termid":"PBO:0070483"}


id: PBO:0078779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 4-1","termid":"PBO:0078779"}


id: PBO:0090169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface protein involved in ascospore wall assembly, GPI anchored Meu10","termid":"PBO:0090169"}


id: FYPO:0001898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain fewer cytoplasmic mRNA processing bodies (P-bodies) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"P-bodies present in decreased numbers","synonyms":[{"name":"P bodies present in decreased numbers","type":"exact"},{"name":"P-bodies present in reduced numbers","type":"exact"},{"name":"cytoplasmic mRNA processing bodies present in decreased numbers","type":"exact"},{"name":"decreased P-body formation","type":"related"},{"name":"decreased P-body number","type":"exact"},{"name":"decreased number of P-bodies present","type":"exact"},{"name":"fewer P-bodies present","type":"exact"}],"termid":"FYPO:0001898"}


id: PBO:0040893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 1A pseudogene 2","termid":"PBO:0040893"}


id: PBO:0047315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 5","termid":"PBO:0047315"}


id: PBO:0079371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 6","termid":"PBO:0079371"}


id: PBO:0030161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_phosphatidylinositol_level","termid":"PBO:0030161"}


id: FYPO:0006952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of N2-acetyl-L-lysine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular N2-acetyl-L-lysine level","synonyms":[{"name":"increased N2-acetyl-L-lysine accumulation","type":"related"},{"name":"increased cellular N2-acetyl-L-lysine level during mitotic cell cycle","type":"related"},{"name":"increased cellular N2-acetyl-L-lysine level during vegetative growth","type":"exact"},{"name":"increased cellular N2-acetyl-lysine level","type":"exact"}],"termid":"FYPO:0006952"}


id: GO:0038152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a the C-C chemokine type 2 receptor (CCR4) on the surface of a cell binding to one of it's physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"C-C chemokine receptor CCR4 signaling pathway","synonyms":[{"name":"C-C chemokine receptor type 4 signaling pathway","type":"exact"},{"name":"chemokine receptor CCR4 signaling pathway","type":"exact"}],"termid":"GO:0038152"}


id: SO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site (e.g. CACTGTG), part of a 5' D-recombination signal sequence (SO:0000556) of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"five_prime_D_recombination_signal_sequence","termid":"SO:0000556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_D_heptamer","synonyms":[{"name":"5'D-HEPTAMER","type":"exact"},{"name":"five prime D heptamer","type":"exact"}],"termid":"SO:0000496"}


id: PBO:0033819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Srp2","termid":"PBO:0033819"}


id: GO:0006418
data:
  {"annotated_genes":["SJAG_01259","SJAG_00103","SJAG_02428","SJAG_04285","SJAG_01352","SJAG_00420","SJAG_02615","SJAG_03585","SJAG_04762","SJAG_02977","SJAG_03626","SJAG_00443","SJAG_04738","SJAG_04409","SJAG_02263","SJAG_01197","SJAG_04473","SJAG_01797","SJAG_00653","SJAG_03545","SJAG_01159","SJAG_03071","SJAG_02015","SJAG_04856","SJAG_02236","SJAG_04094","SJAG_01235","SJAG_02517","SJAG_01522","SJAG_00243","SJAG_03277","SJAG_02206","SJAG_16456","SJAG_00488","SJAG_04482","SJAG_04840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92140],"is_not":false,"summary":null,"term":"GO:0006418"},{"annotations":[98362,101185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006421"},{"annotations":[110206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006422"},{"annotations":[91623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006423"},{"annotations":[89759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990762"},{"annotations":[100781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061475"},{"annotations":[105427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006425"},{"annotations":[97540,86353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006424"},{"annotations":[93073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006426"},{"annotations":[104499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006427"},{"annotations":[112213,108789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006428"},{"annotations":[94157,91089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006429"},{"annotations":[101487,111839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006430"},{"annotations":[91290,101320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006431"},{"annotations":[89760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"},{"annotations":[103342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070144"},{"annotations":[114226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"},{"annotations":[93074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070150"},{"annotations":[90707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070158"},{"annotations":[93360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070183"},{"annotations":[93737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070185"},{"annotations":[89665,93275,114213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006432"},{"annotations":[103239,102036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006433"},{"annotations":[91481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006434"},{"annotations":[90514,103410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006435"},{"annotations":[91955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006436"},{"annotations":[113573,111197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006437"}]},"cv_name":"biological_process","definition":"The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation","termid":"GO:0043039"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00243":null,"SJAG_00420":null,"SJAG_00443":null,"SJAG_00488":null,"SJAG_00653":null,"SJAG_01159":null,"SJAG_01197":null,"SJAG_01235":null,"SJAG_01259":null,"SJAG_01352":null,"SJAG_01522":null,"SJAG_01797":null,"SJAG_02015":null,"SJAG_02206":null,"SJAG_02236":null,"SJAG_02263":null,"SJAG_02428":null,"SJAG_02517":null,"SJAG_02615":null,"SJAG_02977":null,"SJAG_03071":null,"SJAG_03277":null,"SJAG_03545":null,"SJAG_03585":null,"SJAG_03626":null,"SJAG_04094":null,"SJAG_04285":null,"SJAG_04409":null,"SJAG_04473":null,"SJAG_04482":null,"SJAG_04738":null,"SJAG_04762":null,"SJAG_04840":null,"SJAG_04856":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA aminoacylation for protein translation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRNA-CHARGING-PWY"],"synonyms":[{"name":"tRNA charging","type":"narrow"}],"termid":"GO:0006418","terms_by_termid":{"GO:0006418":null,"GO:0006421":null,"GO:0006422":null,"GO:0006423":null,"GO:0006424":null,"GO:0006425":null,"GO:0006426":null,"GO:0006427":null,"GO:0006428":null,"GO:0006429":null,"GO:0006430":null,"GO:0006431":null,"GO:0006432":null,"GO:0006433":null,"GO:0006434":null,"GO:0006435":null,"GO:0006436":null,"GO:0006437":null,"GO:0061475":null,"GO:0070143":null,"GO:0070144":null,"GO:0070146":null,"GO:0070150":null,"GO:0070158":null,"GO:0070183":null,"GO:0070185":null,"GO:1990762":null}}


id: GO:0040036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"regulation of FGF receptor signaling pathway","type":"exact"},{"name":"regulation of FGF receptor signalling pathway","type":"exact"},{"name":"regulation of FGFR signaling pathway","type":"exact"}],"termid":"GO:0040036"}


id: PBO:0048251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G associated kinase","termid":"PBO:0048251"}


id: PBO:0045249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C28","termid":"PBO:0045249"}


id: PBO:0081713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 638","termid":"PBO:0081713"}


id: PBO:0083531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SNX41","termid":"PBO:0083531"}


id: GO:0030831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cGMP catabolic process (obsolete GO:0030831)","synonyms":[{"name":"activation of cGMP catabolic process","type":"narrow"},{"name":"positive regulation of cGMP breakdown","type":"exact"},{"name":"positive regulation of cGMP catabolism","type":"exact"},{"name":"positive regulation of cGMP degradation","type":"exact"},{"name":"stimulation of cGMP catabolic process","type":"narrow"},{"name":"up regulation of cGMP catabolic process","type":"exact"},{"name":"up-regulation of cGMP catabolic process","type":"exact"},{"name":"upregulation of cGMP catabolic process","type":"exact"}],"termid":"GO:0030831"}


id: PBO:0000649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I and III subunit Rpc19","termid":"PBO:0000649"}


id: GO:0098511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to detect low environmental humidity, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["PMID:18269908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of humidity","termid":"GO:0098509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of low humidity","termid":"GO:0098511"}


id: PBO:0068257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 4","termid":"PBO:0068257"}


id: GO:0009899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-kaur-16-ene + diphosphate.","definition_xrefs":["EC:4.2.3.19","RHEA:22220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"ent-kaurene synthase activity","secondary_identifiers":["MetaCyc:4.2.3.19-RXN","KEGG_REACTION:R05092"],"synonyms":[{"name":"ent-copalyl-diphosphate diphosphate-lyase (cyclizing)","type":"related"},{"name":"ent-copalyl-diphosphate diphosphate-lyase (cyclizing, ent-kaurene-forming)","type":"related"},{"name":"ent-kaurene synthase B activity","type":"narrow"},{"name":"ent-kaurene synthetase B activity","type":"narrow"}],"termid":"GO:0009899"}


id: GO:0061833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a tricellular tight junction.","definition_xrefs":["PMID:24889144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to tricellular tight junction","termid":"GO:0061833"}


id: PBO:0090089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, expressed during meiotic cell cycle, possibly related to metazoan RAB11FIP4 family","termid":"PBO:0090089"}


id: PBO:0109360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase","termid":"PBO:0109360"}


id: GO:0033625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of integrin activation","termid":"GO:0033623"},{"relation_name":"positively_regulates","term_name":"integrin activation","termid":"GO:0033622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"positive regulation of integrin activation","synonyms":[{"name":"positive regulation of integrin complex activation","type":"exact"}],"termid":"GO:0033625"}


id: PBO:0082785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import steps for all mitochondrially directed proteins; acts as a receptor for incoming precursor proteins","termid":"PBO:0082785"}


id: GO:0102103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-coumaroyl)acetyl-CoA + 4-coumaryl-CoA + H2O = bisdemethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["EC:2.3.1.219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"demethoxycurcumin synthase activity","termid":"GO:0102103"}


id: GO:0062051
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that functions to transport lipopolysaccharide from its site of synthesis at the cytoplasmic membrane across the periplasm to the outer membrane in an ATP-dependent manner.","definition_xrefs":["PMID:29449493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"lipopolysaccharide transport system","termid":"GO:0062051"}


id: PBO:0075372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX9 antisense RNA 1","termid":"PBO:0075372"}


id: GO:0038141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric complex containing two monomers of the tyrosine kinase receptor ERBB4 (also called HER4).","definition_xrefs":["GOC:signaling","PMID:16460914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"ERBB4-ERBB4 complex","synonyms":[{"name":"ERBB4 homodimer","type":"exact"}],"termid":"GO:0038141"}


id: GO:0061169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of hair follicle placode formation, the developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of hair follicle placode formation","termid":"GO:0061168"},{"relation_name":"positively_regulates","term_name":"hair follicle placode formation","termid":"GO:0060789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair placode formation","termid":"GO:0061169"}


id: PATO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's location within another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"located in","termid":"PATO:0002261"}


id: PBO:0040824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 2 pseudogene 2","termid":"PBO:0040824"}


id: PBO:0069166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 418, pseudogene","termid":"PBO:0069166"}


id: PBO:0067570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 725, pseudogene","termid":"PBO:0067570"}


id: PBO:0003753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase Byr2","termid":"PBO:0003753"}


id: PBO:0071147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 11","termid":"PBO:0071147"}


id: FYPO:0000237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which regulation of translation in response to nitrogen starvation is abnormal. Translation may be down-regulated to a greater extent than normal, and may not be restored to normal levels upon prolonged nitrogen starvation.","definition_xrefs":["PMID:18065650","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to nitrogen starvation","termid":"FYPO:0000152"},{"relation_name":"is_a","term_name":"abnormal regulation of translation in response to stress","termid":"FYPO:0000263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000298","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of translation in response to nitrogen starvation","synonyms":[{"name":"abnormal regulation of translation in response to nitrogen depletion","type":"exact"},{"name":"abnormal regulation of translation in response to nitrogen deprivation","type":"exact"},{"name":"abnormal translational regulation in response to nitrogen starvation","type":"exact"},{"name":"defective in recovery of translation during nitrogen starvation","type":"related"}],"termid":"FYPO:0000237"}


id: PBO:0075119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 168","termid":"PBO:0075119"}


id: FYPO:0003693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (S2-, also called acid labile sulfide) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"},{"relation_name":"is_a","term_name":"decreased cellular sulfide level","termid":"FYPO:0001412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"sulfide absent from cell","synonyms":[{"name":"sulfide absent from cell during mitotic cell cycle","type":"related"},{"name":"sulfide absent from cell during vegetative growth","type":"exact"},{"name":"sulfide ions absent from cell","type":"exact"},{"name":"sulphide absent from cell","type":"exact"}],"termid":"FYPO:0003693"}


id: GO:0004171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: [eIF5A-precursor]-lysine + spermidine = [eIF5A-precursor]-deoxyhypusine + propane-1,3-diamine.","definition_xrefs":["EC:2.5.1.46"],"gene_count":0,"genotype_count":0,"name":"obsolete deoxyhypusine synthase activity (obsolete GO:0004171)","synonyms":[{"name":"[eIF-5A]-deoxyhypusine synthase","type":"related"},{"name":"deoxyhypusine synthase activity","type":"exact"}],"termid":"GO:0004171"}


id: PBO:0068765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 2","termid":"PBO:0068765"}


id: PBO:0091497
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single polypeptide of 70 kDa is produced","termid":"PBO:0091497"}


id: GO:0110140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a flagellum attachment zone. FAZ is a network of cytoskeletal and membranous connections responsible for the lateral attachment of the cilium to the cell body in some trypanosomatid species.","definition_xrefs":["GOC:ach","PMID:26776656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flagellum attachment zone organization","synonyms":[{"name":"FAZ organization","type":"exact"},{"name":"flagellum attachment zone organisation","type":"exact"}],"termid":"GO:0110140"}


id: PBO:0015689
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-mRna Processing","termid":"PBO:0015689"}


id: PBO:0029010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029010"}


id: GO:0007608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of smell","secondary_identifiers":["Wikipedia:Olfaction"],"synonyms":[{"name":"olfaction","type":"exact"},{"name":"scent perception","type":"exact"},{"name":"sense of smell","type":"exact"},{"name":"smell perception","type":"exact"}],"termid":"GO:0007608"}


id: GO:0051318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation (usually by mitosis or meiosis) and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"interphase","termid":"GO:0051325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"G1 phase","secondary_identifiers":["Wikipedia:G1_phase"],"termid":"GO:0051318"}


id: PBO:0005457
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses genes involved in transport","termid":"PBO:0005457"}


id: PBO:0078851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC5 opposite strand","termid":"PBO:0078851"}


id: PBO:0015710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c","termid":"PBO:0015710"}


id: PBO:0072735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 5","termid":"PBO:0072735"}


id: PBO:0072241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 16","termid":"PBO:0072241"}


id: FYPO:0005519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleosome-dependent ATPase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal nucleosome-dependent ATPase activity","termid":"FYPO:0005519"}


id: PBO:0064018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 52","termid":"PBO:0064018"}


id: PBO:0014582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (guanine) methyltransferase Bud23 (predicted)","termid":"PBO:0014582"}


id: GO:0050019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinitol + NAD+ = L-xylulose + H+ + NADH.","definition_xrefs":["EC:1.1.1.12","RHEA:16381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-arabinitol 4-dehydrogenase activity","secondary_identifiers":["MetaCyc:L-ARABINITOL-4-DEHYDROGENASE-RXN","KEGG_REACTION:R01903"],"termid":"GO:0050019"}


id: FYPO:0008257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a greater extent than normal at long terminal repeat (LTR) regions.","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 acetylation during vegetative growth","termid":"FYPO:0004238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K4 acetylation at LTR during vegetative growth","termid":"FYPO:0008257"}


id: MOD:00497
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod [(35)S]dithiobis(succinimidyl propionate) crosslinking","definition_xrefs":["Unimod:126","PubMed:957432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-sulfanylpropanoyl (N-term and Lys)","synonyms":[{"name":"3,3-Dithio-bis-(sulfosuccinimidyl)propionate","type":"related"},{"name":"3-sulfanylpropanoyl","type":"related"},{"name":"Thioacyl","type":"related"}],"termid":"MOD:00497"}


id: GO:0015416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + phosphonate(out) = ADP + phosphate + phosphonate(in). A phosphonate is any salt, anion, or ester of phosphonic acid (HPO(OH)2).","definition_xrefs":["RHEA:18065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type phosphonate transporter activity","secondary_identifiers":["GO:0042917","GO:0102017","EC:7.3.2.2","GO:0015604","MetaCyc:3.6.3.28-RXN"],"synonyms":[{"name":"ATP phosphohydrolase (phosphonate-transporting)","type":"related"},{"name":"ATPase-coupled alkylphosphonate transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled organic phosphonate transmembrane transporter activity","type":"related"},{"name":"alkylphosphonate ABC transporter activity","type":"narrow"},{"name":"alkylphosphonate transmembrane transporter activity","type":"narrow"},{"name":"alkylphosphonate transmembrane-transporting ATPase activity","type":"narrow"},{"name":"organic phosphonate transmembrane transporter activity","type":"broad"},{"name":"organic phosphonate transmembrane-transporting ATPase activity","type":"related"},{"name":"phosphonate ABC transporter","type":"exact"},{"name":"phosphonate transporting ATPase activity","type":"related"},{"name":"phosphonate-transporting ATPase activity","type":"related"}],"termid":"GO:0015416"}


id: GO:0090685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A macromolecular localization process in which RNA is transported to and maintained in a location within the nucleus.","definition_xrefs":["PMID:26305931","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"RNA localization to nucleus","synonyms":[{"name":"RNA localisation to nucleus","type":"exact"}],"termid":"GO:0090685"}


id: FYPO:0004660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to methyl methanesulfonate","synonyms":[{"name":"abolished protein phosphorylation during cellular response to MMS","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to methyl methanesulphonate","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0004660"}


id: FYPO:0000864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromeric regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","synonyms":[{"name":"abnormal centromeric histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3 K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me3 at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 trimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000864"}


id: PBO:0047997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXM1-regulated, gastric cancer associated","termid":"PBO:0047997"}


id: GO:0006846
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035433"},{"annotations":[94777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006847"}]},"cv_name":"biological_process","definition":"The directed movement of acetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"acetate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006846","terms_by_termid":{"GO:0006847":null,"GO:0035433":null}}


id: PBO:0071928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 5","termid":"PBO:0071928"}


id: PBO:0088939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS complex subunit, involved in phosphoinositide metabolism Vac14","termid":"PBO:0088939"}


id: PBO:0083704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER integral membrane protein, ERMES complex subunit; ERMES links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; required for mitophagy; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0083704"}


id: GO:0010665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle cell apoptotic process","termid":"GO:0010662"},{"relation_name":"regulates","term_name":"cardiac muscle cell apoptotic process","termid":"GO:0010659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell apoptotic process","synonyms":[{"name":"regulation of cardiac muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010665"}


id: GO:0051358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the non-fluorescent protein chromophore cross-link from the alpha-carboxyl carbon of residue n, a glutamic acid, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons. This modification is found in the GFP-like non-fluorescent red chromoprotein from the sea anemone Radianthus macrodactylus.","definition_xrefs":["PMID:11682051","RESID:AA0378"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-imino-glutamic acid 5-imidazolinone glycine (obsolete GO:0051358)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-imino-glutamic acid 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-imino-glutamic acid 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051358"}


id: PBO:0072111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14","termid":"PBO:0072111"}


id: GO:0062046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dehydropipecolic acid + NAD(P)H + H+ = L-pipecolic acid + NAD(P)+.","definition_xrefs":["PMID:28330936","PMID:27758894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dehydropipecolic acid reductase","termid":"GO:0062046"}


id: GO:0098616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2SeO4 => diphosphate + adenylylselenate.","definition_xrefs":["PMID:2537056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"selenate adenylyltransferase (ATP) activity","secondary_identifiers":["Reactome:R-HSA-2408525"],"termid":"GO:0098616"}


id: FYPO:0001911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the glycosylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid.","definition_xrefs":["GO:0006486","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein glycosylation during vegetative growth","synonyms":[{"name":"decreased protein glycosylation during mitotic cell cycle","type":"related"},{"name":"protein hypoglycosylation during vegetative growth","type":"exact"},{"name":"reduced protein glycosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001911"}


id: GO:0052658
data:
  {"annotated_genes":["SJAG_00063","SJAG_04545"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104428,107308],"is_not":false,"summary":null,"term":"GO:0052658"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + H2O = 1D-myo-inositol 1,4-bisphosphate + phosphate.","definition_xrefs":["RHEA:19797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol-polyphosphate 5-phosphatase activity","termid":"GO:0004445"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855222","MetaCyc:3.1.3.56-RXN","Reactome:R-HSA-1855174","KEGG_REACTION:R03394"],"synonyms":[{"name":"5PTase activity","type":"related"},{"name":"1D-myo-inositol-1,4,5-trisphosphate 5-phosphohydrolase activity","type":"related"},{"name":"D-myo-inositol 1,4,5-triphosphate 5-phosphatase activity","type":"related"},{"name":"D-myo-inositol 1,4,5-trisphosphate 5-phosphatase activity","type":"related"},{"name":"D-myo-inositol(1,4,5)-trisphosphate 5-phosphatase activity","type":"related"},{"name":"Ins(1,4,5)P3 5-phosphatase activity","type":"related"},{"name":"InsP(3) 5-phosphatase activity","type":"broad"},{"name":"InsP3 5-phosphatase activity","type":"broad"},{"name":"L-myo-inositol 1,4,5-trisphosphate-monoesterase activity","type":"broad"},{"name":"inosine triphosphatase activity","type":"related"},{"name":"inositol 1,4,5-trisphosphate phosphatase activity","type":"broad"},{"name":"inositol phosphate 5-phosphomonoesterase activity","type":"broad"},{"name":"inositol polyphosphate-5-phosphatase activity","type":"broad"},{"name":"myo-inositol-1,4,5-trisphosphate 5-phosphatase activity","type":"related"},{"name":"type I inositol-polyphosphate phosphatase activity","type":"related"},{"name":"type II inositol polyphosphate 5-phosphatase activity","type":"related"}],"termid":"GO:0052658","terms_by_termid":{"GO:0052658":null}}


id: PBO:0064164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVB","termid":"PBO:0064164"}


id: PBO:0077666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 12A","termid":"PBO:0077666"}


id: GO:0090055
data:
  {"annotated_genes":["SJAG_02592","SJAG_02342","SJAG_00142"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87208,90414,106480],"is_not":false,"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of heterochromatin formation at silent mating-type cassette.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterochromatin formation","termid":"GO:0031453"},{"relation_name":"is_a","term_name":"regulation of silent mating-type cassette heterochromatin formation","termid":"GO:0090054"},{"relation_name":"positively_regulates","term_name":"silent mating-type cassette heterochromatin formation","termid":"GO:0030466"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_02342":null,"SJAG_02592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0044085","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of silent mating-type cassette heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of chromatin silencing at silent mating-type cassette","type":"exact"},{"name":"positive regulation of silent mating-type cassette heterochromatin assembly","type":"exact"}],"termid":"GO:0090055","terms_by_termid":{"GO:0090055":null}}


id: PBO:0041797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 6","termid":"PBO:0041797"}


id: PATO:0001213
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001213 mass_unit (obsolete PATO:0001213)","termid":"PATO:0001213"}


id: GO:0003055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the suprachiasmatic nucleus modulates heart rate at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian regulation of heart rate","termid":"GO:0003053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of heart rate by the suprachiasmatic nucleus","synonyms":[{"name":"SCN regulation of heart rate","type":"exact"},{"name":"circadian regulation of heart contraction rate by the suprachiasmatic nucleus","type":"related"},{"name":"master pacemaker clock regulation of heart rate","type":"exact"}],"termid":"GO:0003055"}


id: PBO:0051351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-1 (pseudogene)","termid":"PBO:0051351"}


id: PBO:0069146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 397, pseudogene","termid":"PBO:0069146"}


id: PBO:0034474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_protein_localization_to_double-strand_break_site","termid":"PBO:0034474"}


id: GO:0051262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"protein tetramerization","synonyms":[{"name":"protein tetramer assembly","type":"exact"},{"name":"protein tetramer biosynthesis","type":"exact"},{"name":"protein tetramer biosynthetic process","type":"exact"},{"name":"protein tetramer formation","type":"exact"}],"termid":"GO:0051262"}


id: GO:0009006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete siroheme synthase activity (obsolete GO:0009006)","synonyms":[{"name":"sirohaem synthase activity","type":"exact"},{"name":"siroheme synthase activity","type":"exact"}],"termid":"GO:0009006"}


id: GO:0071300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to retinoic acid","termid":"GO:0032526"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to retinoic acid","synonyms":[{"name":"cellular response to vitamin A acid","type":"exact"}],"termid":"GO:0071300"}


id: PBO:0082596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class I histone deacetylase (HDAC) family member; deacetylates Smc3p on lysine residues at anaphase onset; has sequence similarity to Hda1p, Rpd3p, Hos2p, and Hos3p; interacts with the Tup1p-Ssn6p corepressor complex","termid":"PBO:0082596"}


id: GO:1902159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["GOC:TermGenie","PMID:11420311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide-activated ion channel activity","type":"exact"}],"termid":"GO:1902159"}


id: GO:0070499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the formation of an exosporium, the outermost layer of a bacterial endospore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"exosporium assembly","synonyms":[{"name":"exosporium formation","type":"exact"}],"termid":"GO:0070499"}


id: GO:0021915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural tube development","termid":"GO:0021915"}


id: GO:0061530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aspartate by a cell in which the aspartate acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"aspartate secretion, neurotransmission","termid":"GO:0061530"}


id: FYPO:0007331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing formaldehyde.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on formaldehyde","synonyms":[{"name":"normal cell population growth in presence of formaldehyde","type":"exact"},{"name":"normal cell population growth on formaldehyde","type":"exact"},{"name":"normal vegetative cell population growth on formaldehyde","type":"exact"}],"termid":"FYPO:0007331"}


id: PBO:0083453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CYC8","termid":"PBO:0083453"}


id: PBO:0081506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 410","termid":"PBO:0081506"}


id: GO:1905877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form an invadopodium.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium assembly (obsolete GO:1905877)","synonyms":[{"name":"invadopodium formation","type":"exact"}],"termid":"GO:1905877"}


id: PBO:0003381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical anchoring factor for dynein Mcp5/Num1","termid":"PBO:0003381"}


id: PBO:0078616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 65","termid":"PBO:0078616"}


id: PBO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 1","termid":"PBO:0060605"}


id: GO:0000155
data:
  {"annotated_genes":["SJAG_00331","SJAG_02183","SJAG_01587"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87182,91307,114456],"is_not":false,"summary":null,"term":"GO:0000155"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.","definition_xrefs":["PMID:20223701","PMID:9191038","GOC:mcc","GOC:bf","PMID:10966457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"},{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0140299","GO:0003674","GO:0098772","GO:0016301","GO:0016740","GO:0003824","GO:0004672","GO:0140096"],"is_obsolete":false,"name":"phosphorelay sensor kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.13.3"],"synonyms":[{"name":"two-component sensor activity","type":"narrow"},{"name":"two-component sensor molecule","type":"narrow"},{"name":"two-component system sensor activity","type":"narrow"}],"termid":"GO:0000155","terms_by_termid":{"GO:0000155":null}}


id: GO:0021683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellar granular layer is generated and organized. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["GOC:dph","GO_REF:0000021","ISBN:0838580343","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellar granular layer development","termid":"GO:0021681"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer morphogenesis","termid":"GO:0021683"}


id: PBO:0041646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA2D1 antisense RNA 1","termid":"PBO:0041646"}


id: PBO:0072250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 25","termid":"PBO:0072250"}


id: PBO:0025540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-Q homolog Fta7","termid":"PBO:0025540"}


id: GO:0080139
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107106],"is_not":false,"summary":null,"term":"GO:0080139"}]},"cv_name":"molecular_function","definition":"Enables the transfer of borate from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["PMID:18603465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"borate efflux transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"boron efflux transmembrane transporter activity","type":"related"}],"termid":"GO:0080139","terms_by_termid":{"GO:0080139":null}}


id: MOD:01287
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["Unimod:364#K","PubMed:15602776","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","termid":"MOD:00789"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form - site K","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","type":"related"},{"name":"ICPL:13C(6)","type":"related"}],"termid":"MOD:01287"}


id: RO:0002635
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_endoparasite","termid":"RO:0002635"}


id: PBO:0016995
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae PMP3","termid":"PBO:0016995"}


id: PBO:0113431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single stranded DNA-binding protein found at TG1-3 telomere G-tails; key roles regulating telomerase, telomere end protection, and telomere replication; can dynamically intermolecularly exchange between telomeric single-stranded DNA molecules; essential function is telomere capping; forms homodimer via N-terminus; disruption of dimerization leads to short telomeres; autophagy and proteasome are involved in Cdc13p degradation; differentially phosphorylated through cell cycle","termid":"PBO:0113431"}


id: PATO:0002339
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of being covered with stiff or rough hairs.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hispid","termid":"PATO:0002339"}


id: PBO:0018098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L15 Mrp15 (predicted)","termid":"PBO:0018098"}


id: GO:0034844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: naphthyl-2-methyl-succinate + succinyl-CoA = naphthyl-2-methyl-succinyl-CoA + succinate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthyl-2-methyl-succinate CoA-transferase activity (obsolete GO:0034844)","termid":"GO:0034844"}


id: FYPO:0001759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein phosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phosphatase activity","termid":"FYPO:0004469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphatase activity","synonyms":[{"name":"normal phosphoprotein phosphatase activity","type":"exact"}],"termid":"FYPO:0001759"}


id: GO:0098519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleotide + H2O = nucleotide + phosphate.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide phosphatase activity, acting on free nucleotides (obsolete GO:0098519)","synonyms":[{"name":"nucleotide phosphatase activity","type":"exact"}],"termid":"GO:0098519"}


id: PBO:0049910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexosaminidase subunit beta","termid":"PBO:0049910"}


id: PBO:0064251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin 2","termid":"PBO:0064251"}


id: PBO:0081885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 835","termid":"PBO:0081885"}


id: GO:0110080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of placenta blood vessel development.","definition_xrefs":["PMID:27748453","GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of placenta blood vessel development","termid":"GO:0110079"},{"relation_name":"positively_regulates","term_name":"placenta blood vessel development","termid":"GO:0060674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of placenta blood vessel development","termid":"GO:0110080"}


id: PBO:0064183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XJ, pseudogene","termid":"PBO:0064183"}


id: PR:O14061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ast1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asteroid homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.05","synonyms":[{"name":"Spom972h-ast1","type":"exact"}],"termid":"PR:O14061"}


id: GO:1905653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of artery morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:27389411","GO_REF:0000058","GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"positively_regulates","term_name":"artery morphogenesis","termid":"GO:0048844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of artery morphogenesis","synonyms":[{"name":"activation of arterial morphogenesis","type":"narrow"},{"name":"activation of arteriogenesis","type":"narrow"},{"name":"activation of artery morphogenesis","type":"narrow"},{"name":"positive regulation of arterial morphogenesis","type":"exact"},{"name":"positive regulation of arteriogenesis","type":"exact"},{"name":"up regulation of arterial morphogenesis","type":"exact"},{"name":"up regulation of arteriogenesis","type":"exact"},{"name":"up regulation of artery morphogenesis","type":"exact"},{"name":"up-regulation of arterial morphogenesis","type":"exact"},{"name":"up-regulation of arteriogenesis","type":"exact"},{"name":"up-regulation of artery morphogenesis","type":"exact"},{"name":"upregulation of arterial morphogenesis","type":"exact"},{"name":"upregulation of arteriogenesis","type":"exact"},{"name":"upregulation of artery morphogenesis","type":"exact"}],"termid":"GO:1905653"}


id: GO:0086096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adenylate cyclase-inhibiting adrenergic receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:10571541"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process (obsolete GO:0086096)","synonyms":[{"name":"G-inhibitory-coupled Beta2AR signaling pathway involved in heart process","type":"exact"},{"name":"Gi-coupled Beta2-AR signaling pathway involved in heart process","type":"exact"},{"name":"Gi-coupled adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"cardiac adrenergic receptor signaling pathway via inhibition of adenylate cyclase activity","type":"exact"}],"termid":"GO:0086096"}


id: PBO:0036184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_highly_transcribed_RNA_polymerase_II_genes_during_vegetative_growth","termid":"PBO:0036184"}


id: GO:0050212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + progesterone = 11alpha-hydroxyprogesterone + A + H2O.","definition_xrefs":["RHEA:18205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"progesterone 11-alpha-monooxygenase activity","secondary_identifiers":["MetaCyc:PROGESTERONE-11-ALPHA-MONOOXYGENASE-RXN","EC:1.14.99.14","KEGG_REACTION:R02214"],"synonyms":[{"name":"progesterone 11-alpha-hydroxylase activity","type":"related"},{"name":"progesterone 11a-monooxygenase activity","type":"exact"},{"name":"progesterone 11alpha-hydroxylase activity","type":"related"},{"name":"progesterone 11alpha-monooxygenase activity","type":"related"},{"name":"progesterone,hydrogen-donor:oxygen oxidoreductase (11alpha-hydroxylating)","type":"related"}],"termid":"GO:0050212"}


id: PBO:0029728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_1,3-beta-D-glucan_synthase_activity_during_growth_on_aculeacin_A","termid":"PBO:0029728"}


id: PBO:0063374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate cytidylyltransferase 1B, choline","termid":"PBO:0063374"}


id: GO:0030743
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(1067) in 23S rRNA + S-adenosyl-L-methionine = 2'-O-methyladenosine(1067) in 23S rRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"23S rRNA (adenosine(1067)-2'-O)-methyltransferase activity","secondary_identifiers":["RHEA:43212","MetaCyc:RXN-12464"],"synonyms":[{"name":"RNA-pentose methylase activity","type":"related"},{"name":"S-adenosyl-L-methionine:rRNA (adenosine-2'-O)-methyltransferase activity","type":"related"},{"name":"rRNA adenosine 2'-methylase activity","type":"related"},{"name":"ribosomal ribonucleate adenosine 2'-methyltransferase activity","type":"related"},{"name":"thiostrepton-resistance methylase activity","type":"narrow"}],"termid":"GO:0030743"}


id: GO:0098636
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is capable of carrying out some part of the process of cell adhesion to the cell matrix or to another cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein complex involved in cell adhesion","secondary_identifiers":["GO:1990307"],"synonyms":[{"name":"cell adhesion complex","type":"related"}],"termid":"GO:0098636"}


id: PBO:0083689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enoyl reductase; catalyzes last step in each cycle of very long chain fatty acid elongation; localizes to ER, highly enriched in a structure marking nuclear-vacuolar junctions; coimmunoprecipitates with elongases Elo2p and Elo3p; protein increases in abundance and relative distribution to ER foci increases upon DNA replication stress; human homolog TECR implicated in nonsyndromic mental retardation, can complement yeast mutant","termid":"PBO:0083689"}


id: PBO:0001473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein DNAJB family (predicted)","termid":"PBO:0001473"}


id: PBO:0043563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 2 chain","termid":"PBO:0043563"}


id: FYPO:0002629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactose measured in the cell wall is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased level of substance in cell wall during vegetative growth","termid":"FYPO:0002628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002946"],"is_obsolete":false,"name":"galactose absent from cell wall","synonyms":[{"name":"galactose absent from cell surface","type":"related"},{"name":"galactose absent from cell wall during mitotic cell cycle","type":"related"},{"name":"galactose absent from cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0002629"}


id: PBO:0056370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 7","termid":"PBO:0056370"}


id: PBO:0085647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic recombination; required for normal levels of crossing over, colocalizes with Zip2p to discrete foci on meiotic chromosomes, has homology to bacterial MutS protein","termid":"PBO:0085647"}


id: GO:1901554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paracetamol stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to paracetamol","synonyms":[{"name":"response to acetaminophen","type":"exact"}],"termid":"GO:1901554"}


id: PBO:0089089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRC complex (ER membrane insertion) TPR repeat subunit Sgt2","termid":"PBO:0089089"}


id: PBO:0042024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 82","termid":"PBO:0042024"}


id: MOD:00374
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 3,4-dihydroxy-L-arginine.","definition_xrefs":["Unimod:425#R","ChEBI:141829","RESID:AA0369","PubMed:10978343","PubMed:12686488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated arginine","termid":"MOD:00682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,4-dihydroxy-L-arginine","synonyms":[{"name":"(2S,3Xi,4Xi)-2-amino-5-carbamimidamido-3,4-dihydroxypentanoic acid","type":"exact"},{"name":"2-amino-5-guanidino-3,4-dihydroxypentanoic acid","type":"exact"},{"name":"3,4-dihydroxy-L-arginine","type":"exact"},{"name":"3,4-dihydroxylated L-arginine","type":"exact"},{"name":"34Hy2Arg","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"MOD_RES 3,4-dihydroxyarginine","type":"exact"},{"name":"beta,gamma-dihydroxyarginine","type":"exact"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:00374"}


id: PBO:0067428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 547, pseudogene","termid":"PBO:0067428"}


id: PBO:0048468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial cells missing transcription factor 1","termid":"PBO:0048468"}


id: PBO:0067761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 61","termid":"PBO:0067761"}


id: PBO:0074387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG8 nonsense mediated mRNA decay factor","termid":"PBO:0074387"}


id: PBO:0076767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 6","termid":"PBO:0076767"}


id: PBO:0025534
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatasia","termid":"PBO:0025534"}


id: MOD:01441
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a natural, standard, encoded residue.","definition_xrefs":["PubMed:6692818","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural residue","termid":"MOD:00009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural, standard, encoded residue","termid":"MOD:01441"}


id: SO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytologically observable heterochromatic regions of chromosomes away from centromeres that contain predominatly large tandem repeats and retrotransposons.","definition_xrefs":["PMID:6439888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"knob","synonyms":[{"name":"Heterochromatin Knob","type":"exact"}],"termid":"SO:0002257"}


id: PBO:0028936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_polypeptone","termid":"PBO:0028936"}


id: SO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA between two loop anchor positions that are held in close physical proximity.","definition_xrefs":["PMID:32782014","GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"},{"relation_name":"overlaps","term_name":"topologically_associated_domain","termid":"SO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_loop","synonyms":[{"name":"DNA loop","type":"exact"}],"termid":"SO:0002307"}


id: PBO:0002896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan endo-1,3-alpha-glucosidase Agn1","termid":"PBO:0002896"}


id: GO:0031103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of axons following their loss or damage.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection regeneration","termid":"GO:0031102"},{"relation_name":"is_a","term_name":"response to axon injury","termid":"GO:0048678"},{"relation_name":"is_a","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon regeneration","termid":"GO:0031103"}


id: PBO:0087777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit Vb of cytochrome c oxidase; cytochrome c oxidase is the terminal member of the mitochondrial inner membrane electron transport chain; Cox5Bp is predominantly expressed during anaerobic growth while its isoform Va (Cox5Ap) is expressed during aerobic growth; COX5B has a paralog, COX5A, that arose from the whole genome duplication","termid":"PBO:0087777"}


id: PBO:0055796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a)","termid":"PBO:0055796"}


id: FYPO:0006054
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115739,115742],"is_not":false,"summary":null,"term":"FYPO:0006054"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of lipid droplet formation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"lipid droplets present in decreased numbers","termid":"FYPO:0002552"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased lipid droplet formation","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_02763"],"single_locus_genotype_uniquenames":["ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased lipid droplet assembly","type":"exact"},{"name":"decreased lipid particle formation","type":"exact"},{"name":"reduced lipid droplet formation","type":"exact"}],"termid":"FYPO:0006054","terms_by_termid":{"FYPO:0006054":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0086944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor for a factor pheromone; couples to MAP kinase cascade to mediate pheromone response; transcribed in alpha cells and required for mating by alpha cells, ligand bound receptors endocytosed and recycled to the plasma membrane; GPCR","termid":"PBO:0086944"}


id: GO:0033991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 1,5-anhydro-D-fructose = 2-hydroxy-2-(hydroxymethyl)-2H-pyran-3(6H)-one + H2O; (1a) 1,5-anhydro-D-fructose = 1,5-anhydro-4-deoxy-D-glycero-hex-3-en-2-ulose + H2O and (1b) 1,5-anhydro-4-deoxy-D-glycero-hex-3-en-2-ulose = 2-hydroxy-2-(hydroxymethyl)-2H-pyran-3(6H)-one.","definition_xrefs":["EC:4.2.1.110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"aldos-2-ulose dehydratase activity","secondary_identifiers":["RHEA:12100","MetaCyc:RXN-14306"],"synonyms":[{"name":"1,5-anhydro-D-fructose dehydratase (microthecin-forming) activity","type":"related"},{"name":"1,5-anhydro-D-fructose hydro-lyase (microthecin-forming) activity","type":"related"},{"name":"AUDH","type":"related"},{"name":"pyranosone dehydratase activity","type":"related"}],"termid":"GO:0033991"}


id: GO:0018204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-leucine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-leucine modification","termid":"GO:0018204"}


id: PBO:0003847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Sof1 (predicted)","termid":"PBO:0003847"}


id: GO:0071465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desiccation stimulus, extreme dryness resulting from the prolonged deprivation of water.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to desiccation","termid":"GO:0009269"},{"relation_name":"is_a","term_name":"cellular response to water deprivation","termid":"GO:0042631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to desiccation","synonyms":[{"name":"desiccation tolerance","type":"related"}],"termid":"GO:0071465"}


id: GO:0019917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The dehydration of peptidyl-serine, followed by hydrogenation to produce peptidyl-D-alanine.","definition_xrefs":["RESID:AA0191"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-D-alanine racemization via peptidyl-L-serine (obsolete GO:0019917)","termid":"GO:0019917"}


id: PBO:0066472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and FYVE like domain containing E3 ubiquitin protein ligase","termid":"PBO:0066472"}


id: PBO:0060869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member A","termid":"PBO:0060869"}


id: PBO:0063580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo ribosomal biogenesis factor 1","termid":"PBO:0063580"}


id: GO:0032388
data:
  {"annotated_genes":["SJAG_04597","SJAG_01245","SJAG_04464","SJAG_03453","SJAG_02592","SJAG_00906","SJAG_04312","SJAG_01805","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[70418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[96523,97937,89846,107152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[90413,98480,86877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of substances within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of intracellular transport","type":"narrow"},{"name":"stimulation of intracellular transport","type":"narrow"},{"name":"up regulation of intracellular transport","type":"exact"},{"name":"up-regulation of intracellular transport","type":"exact"},{"name":"upregulation of intracellular transport","type":"exact"}],"termid":"GO:0032388","terms_by_termid":{"GO:0042307":null,"GO:0046827":null,"GO:0070863":null,"GO:1902854":null}}


id: PBO:0043330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic lymphocytic leukemia up-regulated 1","termid":"PBO:0043330"}


id: GO:0072090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mesenchymal stem cells, resulting in the expansion of a stem cell population, that contributes to the shaping of a nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell proliferation involved in nephron morphogenesis","termid":"GO:0072090"}


id: PBO:0044365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 55","termid":"PBO:0044365"}


id: PBO:0067103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 145, pseudogene","termid":"PBO:0067103"}


id: PBO:0041582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 31","termid":"PBO:0041582"}


id: GO:0071611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granulocyte colony-stimulating factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"granulocyte colony-stimulating factor production","synonyms":[{"name":"CSF3 production","type":"exact"},{"name":"G-CSF production","type":"exact"},{"name":"colony stimulating factor 3 (granulocyte) production","type":"exact"},{"name":"filgrastim production","type":"exact"},{"name":"granulocyte colony stimulating factor production","type":"exact"},{"name":"lenograstim production","type":"exact"},{"name":"pluripoietin production","type":"exact"}],"termid":"GO:0071611"}


id: PBO:0081582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 511","termid":"PBO:0081582"}


id: GO:0048254
data:
  {"annotated_genes":["SJAG_05223","SJAG_00752"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94019,113851],"is_not":false,"summary":null,"term":"GO:0048254"}]},"cv_name":"biological_process","definition":"Any process in which small nucleolar RNA is transported to, or maintained in, a specific location.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"snoRNA localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of snoRNA localization","type":"exact"},{"name":"small nucleolar RNA localization","type":"exact"},{"name":"snoRNA localisation","type":"exact"}],"termid":"GO:0048254","terms_by_termid":{"GO:0048254":null}}


id: PBO:0030829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoribosylamine-glycine_ligase_activity","termid":"PBO:0030829"}


id: MOD:02024
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a cervonoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"cervonoylated residue","termid":"MOD:02024"}


id: FYPO:0007626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oxidation is normal (i.e. indistinguishable from wild type) during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein oxidation during vegetative growth","termid":"FYPO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein oxidation during cellular response to hydrogen peroxide","synonyms":[{"name":"normal protein oxidation during cellular response to H2O2","type":"exact"},{"name":"normal protein oxidation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"normal protein oxidation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"normal protein/peptide oxidation during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0007626"}


id: FYPO:0003955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular metabolism phenotype observed in the vegetative growth phase of the life cycle in which triglyceride biosynthesis is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased triglyceride biosynthetic process","synonyms":[{"name":"increased TAG biosynthetic process","type":"exact"},{"name":"increased triacylglycerol biosynthesis","type":"exact"},{"name":"increased triacylglycerol biosynthetic process","type":"exact"},{"name":"increased triglyceride biosynthesis","type":"exact"},{"name":"increased triglyceride biosynthetic process during mitotic cell cycle","type":"related"},{"name":"increased triglyceride biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0003955"}


id: PBO:0077296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 38B","termid":"PBO:0077296"}


id: PBO:0090960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-remodelling mannose-ethanolamine phosphate phosphodiesterase","termid":"PBO:0090960"}


id: PBO:0082621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a heterodimeric Poc4p-Irc25p chaperone; involved in assembly of alpha subunits into the 20S proteasome; may regulate formation of proteasome isoforms with alternative subunits under different conditions; upregulates proteasome assembly in response to the unfolded protein response activated by mistargeting of proteins (UPRam)","termid":"PBO:0082621"}


id: CHEBI:52289
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wortmannin","termid":"CHEBI:52289"}


id: PBO:0004619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"para-aminobenzoate synthase (predicted)","termid":"PBO:0004619"}


id: PBO:0091285
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMtor","termid":"PBO:0091285"}


id: GO:1990699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a hydrolase reaction that removes a palmitoleyl moiety, a 16-carbon monounsaturated fatty acid (C16:1), from some substrate.","definition_xrefs":["PMID:25731175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"palmitoleyl hydrolase activity","termid":"GO:1990699"}


id: PBO:0025509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Ucp3","termid":"PBO:0025509"}


id: PBO:0076037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 33 pseudogene 1","termid":"PBO:0076037"}


id: GO:0060138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the embryo that results in birth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"parturition","termid":"GO:0007567"},{"relation_name":"part_of","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fetal process involved in parturition","termid":"GO:0060138"}


id: PBO:0042121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 194","termid":"PBO:0042121"}


id: PBO:0034692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_lysophosphatidylcholine_level","termid":"PBO:0034692"}


id: PBO:0000544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Atf31","termid":"PBO:0000544"}


id: GO:0019026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A single stranded RNA genome with the opposite nucleotide polarity as mRNA.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete negative sense viral genome (obsolete GO:0019026)","termid":"GO:0019026"}


id: PBO:0055868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat protein 1","termid":"PBO:0055868"}


id: PBO:0001884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein WIPI family","termid":"PBO:0001884"}


id: GO:0048831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot development.","definition_xrefs":["PMID:16361392","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system development","synonyms":[{"name":"regulation of shoot development","type":"exact"}],"termid":"GO:0048831"}


id: GO:1901140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a p-coumaryl alcohol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"p-coumaryl alcohol transport","synonyms":[{"name":"4-hydroxycinnamyl alcohol transport","type":"exact"}],"termid":"GO:1901140"}


id: PBO:0050896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate filament family orphan 1","termid":"PBO:0050896"}


id: GO:1905004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of picolinic acid.","definition_xrefs":["GO_REF:0000068","GOC:bf","GOC:TermGenie","PMID:19843166","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"},{"relation_name":"is_a","term_name":"picolinic acid metabolic process","termid":"GO:1905003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"picolinic acid biosynthetic process","synonyms":[{"name":"picolinate biosynthesis","type":"exact"},{"name":"picolinate biosynthetic process","type":"exact"},{"name":"picolinic acid anabolism","type":"exact"},{"name":"picolinic acid biosynthesis","type":"exact"},{"name":"picolinic acid formation","type":"exact"},{"name":"picolinic acid synthesis","type":"exact"}],"termid":"GO:1905004"}


id: PBO:0016545
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SRT1 and RER2","termid":"PBO:0016545"}


id: GO:1901246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lung ciliated cell differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"lung ciliated cell differentiation","termid":"GO:0061141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung ciliated cell differentiation","termid":"GO:1901246"}


id: PBO:0055442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2873","termid":"PBO:0055442"}


id: GO:0015487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: melibiose(out) + monovalent cation(out) = melibiose(in) + monovalent cation(in).","definition_xrefs":["TC:2.A.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"melibiose transmembrane transporter activity","termid":"GO:0015156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"melibiose:monoatomic cation symporter activity","synonyms":[{"name":"melibiose permease activity","type":"related"},{"name":"melibiose:cation symporter activity","type":"broad"},{"name":"melibiose:monovalent cation symporter activity","type":"exact"}],"termid":"GO:0015487"}


id: PBO:0080190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial growth factor C","termid":"PBO:0080190"}


id: PBO:0048546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor, augmenter of liver regeneration","termid":"PBO:0048546"}


id: GO:0005709
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during prophase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete prophase chromosome (obsolete GO:0005709)","synonyms":[{"name":"prophase chromosome","type":"exact"}],"termid":"GO:0005709"}


id: PR:P48009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septin-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.11c","secondary_identifiers":["UniProtKB:P48009"],"synonyms":[{"name":"SPAC9G1.11c","type":"related"},{"name":"Spom972h-SEPT4","type":"exact"}],"termid":"PR:P48009"}


id: GO:0048562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic organ morphogenesis","termid":"GO:0048562"}


id: FYPO:0000610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through S phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic S phase progression","synonyms":[{"name":"abnormal S phase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic S phase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in S","type":"exact"},{"name":"mitotic cell cycle progression in S phase: abnormal","type":"related"}],"termid":"FYPO:0000610"}


id: GO:1990310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type-III dockerin domain of a protein. Type-III dockerin domain is the binding partner of type-III cohesin domain.","definition_xrefs":["PMID:24080387","PMID:23195689","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type-III dockerin domain binding","termid":"GO:1990310"}


id: PBO:0052386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 26A","termid":"PBO:0052386"}


id: MOD:00851
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with (18)O.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"},{"relation_name":"is_a","term_name":"(18)O labeled residue","termid":"MOD:00844"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled deamidated residue","termid":"MOD:00851"}


id: GO:2000574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of microtubule motor activity.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule motor activity (obsolete GO:2000574)","synonyms":[{"name":"regulation of axonemal motor activity","type":"related"},{"name":"regulation of dynein","type":"related"},{"name":"regulation of dynein ATPase activity","type":"related"},{"name":"regulation of kinesin","type":"related"},{"name":"regulation of kinesin motor activity","type":"related"},{"name":"regulation of kinetochore motor activity","type":"related"}],"termid":"GO:2000574"}


id: FYPO:0006861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which an RNA is observed in a particular location where it is not normally found.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"output_of","term_name":"abnormal RNA localization during vegetative growth","termid":"FYPO:0000360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"mislocalized RNA during vegetative growth","synonyms":[{"name":"mislocalised RNA during vegetative growth","type":"exact"},{"name":"mislocalized RNA during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006861"}


id: SO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Jockey retrotransposons are LINE elements (SO:0000194) found only in arthropods. The full-length element is ~ 5 kb and contains two open reading frames (SO:0000236), ORF1 (568 aa) and ORF2 (916 aa), the second of which encodes an apurinic endonuclease (APE) and a reverse transcriptase (RT).","definition_xrefs":["PMID:31709017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LINE_element","termid":"SO:0000194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jockey_LINE_retrotransposon","synonyms":[{"name":"Jockey LINE retrotransposon","type":"exact"},{"name":"LINE Jockey element","type":"exact"},{"name":"RIJ retrotransposon","type":"exact"}],"termid":"SO:0002271"}


id: PBO:0069609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 886, pseudogene","termid":"PBO:0069609"}


id: GO:0034300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["GOC:ds","GOC:mah","PMID:32839172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporangiospore formation","termid":"GO:0034300"}


id: PBO:0074326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2","termid":"PBO:0074326"}


id: PBO:0039912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 10 like","termid":"PBO:0039912"}


id: GO:0033888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine 6-sulfate + H2O = 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine + H+ + sulfate.","definition_xrefs":["EC:3.1.6.10","RHEA:10536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"chondro-6-sulfatase activity","secondary_identifiers":["MetaCyc:CHONDRO-6-SULFATASE-RXN","KEGG_REACTION:R03518"],"synonyms":[{"name":"4-deoxy-beta-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine-6-sulfate 6-sulfohydrolase activity","type":"related"}],"termid":"GO:0033888"}


id: PBO:0048334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 45","termid":"PBO:0048334"}


id: PATO:0001492
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth rate","termid":"PATO:0001492"}


id: GO:1901657
data:
  {"annotated_genes":["SJAG_00694","SJAG_05334","SJAG_04265","SJAG_01261","SJAG_03096","SJAG_01781","SJAG_04264","SJAG_04693","SJAG_02959","SJAG_02582","SJAG_01359","SJAG_03771","SJAG_00957","SJAG_04927","SJAG_00885","SJAG_03881","SJAG_03213","SJAG_01859","SJAG_05029","SJAG_04735","SJAG_01070","SJAG_02179","SJAG_00044","SJAG_01673","SJAG_02580","SJAG_00134","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[83622,83623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[86572,109860,109859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[113016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[85227,104506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[104631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[104632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[109247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[104633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[94663,94662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[108321,86683,87098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[103388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042278"},{"annotations":[89796,85808,112005,89573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[86684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[101615,103390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006213"},{"annotations":[93806,109974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[108064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"},{"annotations":[90742,94141,109978,102046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosyl compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01070":null,"SJAG_01261":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03213":null,"SJAG_03771":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_04265":null,"SJAG_04693":null,"SJAG_04735":null,"SJAG_04927":null,"SJAG_05029":null,"SJAG_05334":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosyl compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycosyl compound metabolism","type":"exact"}],"termid":"GO:1901657","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0006213":null,"GO:0009972":null,"GO:0031591":null,"GO:0042278":null,"GO:0043097":null,"GO:0043174":null,"GO:0046085":null,"GO:0046086":null,"GO:0046132":null,"GO:0046135":null,"GO:0046495":null,"GO:0071590":null,"GO:0071592":null}}


id: GO:1904400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Thyroid stimulating hormone stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:11238928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glycoprotein","termid":"GO:1904587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Thyroid stimulating hormone","termid":"GO:1904400"}


id: GO:0019934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic GMP (cGMP), and ends with activation of downstream effectors that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cGMP-mediated signaling","synonyms":[{"name":"cGMP-mediated signalling","type":"exact"}],"termid":"GO:0019934"}


id: GO:0010997
data:
  {"annotated_genes":["SJAG_03858","SJAG_03809","SJAG_01330","SJAG_04853","SJAG_04699","SJAG_00071","SJAG_04671","SJAG_00666"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84720,84980,95445,96221,98386,102436,111103,111720],"is_not":false,"summary":null,"term":"GO:0010997"}]},"cv_name":"molecular_function","definition":"Binding to an anaphase-promoting complex. A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_01330":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04671":null,"SJAG_04699":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"anaphase-promoting complex binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"APC binding","type":"exact"}],"termid":"GO:0010997","terms_by_termid":{"GO:0010997":null}}


id: GO:1901776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mitomycin C.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:10099135","PMID:10094699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"mitomycin C metabolic process","termid":"GO:1901775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"mitomycin C catabolic process","synonyms":[{"name":"mitomycin C breakdown","type":"exact"},{"name":"mitomycin C catabolism","type":"exact"},{"name":"mitomycin C degradation","type":"exact"}],"termid":"GO:1901776"}


id: GO:0050177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylpyruvate = phenylacetaldehyde + CO2.","definition_xrefs":["EC:4.1.1.43","MetaCyc:PHENYLPYRUVATE-DECARBOXYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phenylpyruvate decarboxylase activity","secondary_identifiers":["RHEA:14185"],"synonyms":[{"name":"phenylpyruvate carboxy-lyase (phenylacetaldehyde-forming)","type":"related"},{"name":"phenylpyruvate carboxy-lyase activity","type":"related"}],"termid":"GO:0050177"}


id: GO:0005477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of pyruvate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"},{"relation_name":"is_a","term_name":"pyruvate transmembrane transporter activity","termid":"GO:0050833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"pyruvate secondary active transmembrane transporter activity","synonyms":[{"name":"pyruvate carrier activity","type":"related"}],"termid":"GO:0005477"}


id: GO:0004632
data:
  {"annotated_genes":["SJAG_01139"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113230],"is_not":false,"summary":null,"term":"GO:0004632"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + (R)-4'-phosphopantothenate + L-cysteine = CMP + diphosphate + (R)-4'-phosphopantothenoyl-L-cysteine. Cysteine can be replaced by some of its derivatives.","definition_xrefs":["EC:6.3.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01139":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"phosphopantothenate--cysteine ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:P-PANTOCYSLIG-RXN","Reactome:R-HSA-196753","RHEA:19397"],"synonyms":[{"name":"(R)-4'-phosphopantothenate:L-cysteine ligase activity","type":"related"},{"name":"phosphopantothenate-cysteine ligase activity","type":"exact"},{"name":"phosphopantothenoylcysteine synthetase activity","type":"exact"}],"termid":"GO:0004632","terms_by_termid":{"GO:0004632":null}}


id: GO:0008358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the anterior/posterior axis of the embryo by gradients of maternally-transcribed gene products; exemplified in insects by the morphogens, bicoid and nanos.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior axis specification, embryo","termid":"GO:0008595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal determination of anterior/posterior axis, embryo","termid":"GO:0008358"}


id: PBO:0040726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated transcription factor 1 pseudogene 1","termid":"PBO:0040726"}


id: FYPO:0003833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell proceeds normally through a specific cell cycle phase. A cell cycle phase is any of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GO:0022403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle","termid":"FYPO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle phase","termid":"FYPO:0003833"}


id: PBO:0015255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sir antagonist, ubiquitin-protein ligase E3","termid":"PBO:0015255"}


id: PBO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.7","termid":"PBO:0005542"}


id: RO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) postively regulates process(P2) iff: P1 initiates P2, or P1 increases the the frequency of initiation of P2 or the magnitude or rate of output of P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"},{"relation_name":"is_a","term_name":"causally_upstream_of,_positive_effect","termid":"RO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulates","termid":"RO:0002213"}


id: GO:0036378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Conversion of vitamin D3 from its largely inactive form (calciol, also called cholecalciferol) into a hormonally active form (calcitriol). Conversion requires 25-hydroxylation of calciol in the liver to form calcidiol, and subsequent 1,alpha-hydroxylation of calcidiol in the kidney to form calcitriol.","definition_xrefs":["PMID:17426122","GOC:BHF","GOC:rl","PMID:20511049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D biosynthetic process","termid":"GO:0042368"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"calcitriol biosynthetic process from calciol","synonyms":[{"name":"1alpha,25(OH)2D3 biosynthesis","type":"broad"},{"name":"1alpha,25-dihydroxycholecalciferol biosynthesis","type":"broad"},{"name":"1alpha,25-dihydroxyvitamin D3 biosynthesis","type":"broad"},{"name":"calcitriol biosynthesis from calciol","type":"exact"},{"name":"vitamin D3 activation","type":"exact"}],"termid":"GO:0036378"}


id: PBO:0028026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_meiosis_II","termid":"PBO:0028026"}


id: GO:1903018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycoprotein metabolic process.","definition_xrefs":["GOC:rl","GO_REF:0000058","PMID:23544079","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glycoprotein metabolic process","synonyms":[{"name":"regulation of glycoprotein metabolism","type":"exact"}],"termid":"GO:1903018"}


id: GO:1900306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltoheptaose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptasaccharide transport","termid":"GO:1900294"},{"relation_name":"regulates","term_name":"maltoheptaose transport","termid":"GO:2001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of maltoheptaose transport","termid":"GO:1900306"}


id: PBO:0030465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_gross_chromosomal_rearrangement","termid":"PBO:0030465"}


id: PBO:0063899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class V","termid":"PBO:0063899"}


id: PBO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Changed Amorilide Resistance","termid":"PBO:0002110"}


id: PR:Q9P7F7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 4b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar-sorting protein snf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.07c","secondary_identifiers":["UniProtKB:Q9P7F7"],"synonyms":[{"name":"SPAC1142.07c","type":"related"},{"name":"Spom972h-CHMP4B","type":"exact"},{"name":"vacuolar protein-sorting-associated protein 32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vps32","type":"related"}],"termid":"PR:Q9P7F7"}


id: PBO:0076166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 2","termid":"PBO:0076166"}


id: PBO:0041269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 1 pseudogene 1","termid":"PBO:0041269"}


id: PBO:0075079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 129","termid":"PBO:0075079"}


id: PBO:0064463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 1, catalytic subunit","termid":"PBO:0064463"}


id: PR:Q9P7K7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21C3.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.17c","synonyms":[{"name":"Spom972h-SPBC21C3.17c","type":"exact"}],"termid":"PR:Q9P7K7"}


id: PBO:0089293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Rnf170","termid":"PBO:0089293"}


id: GO:1905054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any calcium-induced calcium release activity that is involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["PMID:15919193","GO_REF:0000061","PMID:23918386","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-induced calcium release activity","termid":"GO:0048763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"calcium-induced calcium release activity involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium-induced calcium release activity involved in regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:1905054"}


id: GO:0003784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete barbed-end actin capping/severing activity (obsolete GO:0003784)","synonyms":[{"name":"barbed-end actin capping/severing activity","type":"exact"}],"termid":"GO:0003784"}


id: GO:0007527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adult somatic muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult somatic muscle development","termid":"GO:0007527"}


id: GO:0005731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of a chromosome where nucleoli form during interphase, and where genes encoding the largest rRNA precursor transcript are tandemly arrayed.","definition_xrefs":["PMID:14504406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleolar chromatin","termid":"GO:0030874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005694","GO:0005730","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleolus organizer region","secondary_identifiers":["Wikipedia:Nucleolus_organizer_region"],"synonyms":[{"name":"NOR","type":"exact"},{"name":"nucleolus organiser region","type":"exact"},{"name":"nucleolus organizer complex","type":"related"}],"termid":"GO:0005731"}


id: FYPO:0005270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to salt stress","synonyms":[{"name":"reduced protein kinase activity during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0005270"}


id: FYPO:0006251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA aminoacylation, the formation of an ester bond between a tRNA molecule and an amino acid specified by the tRNA anticodon, is decreased. All tRNAs aminoacylation may be decreased, or the aminoacylation of one or more specific tRNAs may be affected.","definition_xrefs":["PomBase:mah","GO:0006418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA aminoacylation","termid":"FYPO:0006250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"decreased tRNA aminoacylation","synonyms":[{"name":"decreased tRNA aminoacylation during mitotic cell cycle","type":"related"},{"name":"decreased tRNA aminoacylation during vegetative growth","type":"exact"},{"name":"decreased tRNA aminoacylation for protein translation","type":"exact"},{"name":"decreased tRNA charging","type":"narrow"},{"name":"reduced tRNA aminoacylation","type":"exact"}],"termid":"FYPO:0006251"}


id: GO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose = UDP + glycoprotein-alpha-D-galactosyl-(1,3)-(alpha-L-fucosyl-(1,2))-D-galactose.","definition_xrefs":["EC:2.4.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"fucosylgalactoside 3-alpha-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9034053","RHEA:14349","MetaCyc:2.4.1.37-RXN","Reactome:R-HSA-9033961"],"synonyms":[{"name":"B transferase activity","type":"related"},{"name":"UDP-galactose:alpha-L-fucosyl-(1,2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:alpha-L-fucosyl-(1->2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:O-alpha-L-fucosyl(1,2)D-galactose alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:O-alpha-L-fucosyl(1->2)D-galactose alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:alpha-L-fucosyl-(1,2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:alpha-L-fucosyl-(1->2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"[blood group substance] alpha-galactosyltransferase activity","type":"narrow"},{"name":"blood-group substance B-dependent galactosyltransferase activity","type":"narrow"},{"name":"blood-group substance beta-dependent galactosyltransferase activity","type":"narrow"},{"name":"fucosylglycoprotein 3-alpha-galactosyltransferase activity","type":"related"},{"name":"glycoprotein-fucosylgalactoside alpha-galactosyltransferase activity","type":"exact"},{"name":"histo-blood group B transferase activity","type":"narrow"},{"name":"histo-blood substance B-dependent galactosyltransferase activity","type":"related"},{"name":"histo-blood substance beta-dependent galactosyltransferase activity","type":"narrow"}],"termid":"GO:0004381"}


id: PBO:0085966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overproduction blocks cell cycle arrest in the presence of mating pheromone; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085966"}


id: GO:0001933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of addition of phosphate groups to amino acids within a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"negative regulation of phosphorylation","termid":"GO:0042326"},{"relation_name":"negatively_regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein phosphorylation","synonyms":[{"name":"down regulation of protein amino acid phosphorylation","type":"exact"},{"name":"down-regulation of protein amino acid phosphorylation","type":"exact"},{"name":"downregulation of protein amino acid phosphorylation","type":"exact"},{"name":"inhibition of protein amino acid phosphorylation","type":"narrow"},{"name":"negative regulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001933"}


id: PBO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ctf18 RFC-like complex subunit Dcc1","termid":"PBO:0000348"}


id: MOD:01662
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N5-(ADP-ribosyl)-L-glutamine.","definition_xrefs":["PubMed:20185726","RESID:AA0518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N5-(ADP-ribosyl)-L-glutamine","synonyms":[{"name":"(S)-2-amino-4-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]amino)-5-oxopentanoic acid","type":"exact"},{"name":"N5-(ADP-ribosyl)-L-glutamine","type":"exact"},{"name":"N5-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-glutamine","type":"exact"},{"name":"N5-alpha-D-ribofuranosyl-L-glutamine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"}],"termid":"MOD:01662"}


id: FYECO:0000354
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which phleomycin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ phleomycin","termid":"FYECO:0000354"}


id: PBO:0113417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein involved in asymmetric localization of ASH1 mRNA; represses translation of ASH1 mRNA, an effect reversed by Yck1p-dependent phosphoryation; regulates telomere position effect and length; similarity to hnRNP-K; increases mRNA stability by binding (CNN)n repeat elements","termid":"PBO:0113417"}


id: PBO:0005332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human Leydig cell tumor 10 kDa protein homolog","termid":"PBO:0005332"}


id: PATO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being locked together or interconnected to another entity.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interlocked with","termid":"PATO:0002437"}


id: GO:0005721
data:
  {"annotated_genes":["SJAG_02866","SJAG_04623","SJAG_04670","SJAG_03350","SJAG_03945","SJAG_01332","SJAG_03926","SJAG_01075","SJAG_00934","SJAG_04039","SJAG_04030","SJAG_01046","SJAG_01873","SJAG_04141","SJAG_03635","SJAG_03989","SJAG_00756","SJAG_03664","SJAG_03689","SJAG_04253","SJAG_04412","SJAG_05372","SJAG_02846","SJAG_03789","SJAG_01579","SJAG_03680","SJAG_04508","SJAG_03418","SJAG_04574","SJAG_05329","SJAG_03042","SJAG_01067","SJAG_00335","SJAG_01540","SJAG_03997","SJAG_04186","SJAG_02401","SJAG_00414","SJAG_03844","SJAG_03982","SJAG_03942","SJAG_02621","SJAG_03356","SJAG_02773","SJAG_02990","SJAG_01601","SJAG_01745","SJAG_02119","SJAG_02409","SJAG_02927","SJAG_00678","SJAG_03916","SJAG_00302","SJAG_02778","SJAG_03543"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83678,83902,85392,86079,86947,87290,87361,87430,87808,88090,88399,89867,90116,90132,92213,92792,95037,95196,95639,95687,97920,98087,98088,98089,98878,99326,100203,100298,102414,102653,103452,103947,104287,106619,107349,108249,108354,108751,108752,108753,109212,109381,109443,109825,110143,110438,110575,110721,112147,113038,113297,113873,113884,113931,114259,114727,114865,114986],"is_not":false,"summary":null,"term":"GO:0005721"}]},"cv_name":"cellular_component","definition":"Heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by methylated H3 histone at lysine 9 (H3K9me2/H3K9me3).","definition_xrefs":["PMID:21437270","PMID:9413993","PMID:22729156","PMID:12019236","PMID:20206496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"},{"relation_name":"part_of","term_name":"chromosome, centromeric region","termid":"GO:0000775"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_00414":null,"SJAG_00678":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_01046":null,"SJAG_01067":null,"SJAG_01075":null,"SJAG_01332":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01745":null,"SJAG_01873":null,"SJAG_02119":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02621":null,"SJAG_02773":null,"SJAG_02778":null,"SJAG_02846":null,"SJAG_02866":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03042":null,"SJAG_03350":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03543":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03789":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03926":null,"SJAG_03942":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03989":null,"SJAG_03997":null,"SJAG_04030":null,"SJAG_04039":null,"SJAG_04141":null,"SJAG_04186":null,"SJAG_04253":null,"SJAG_04412":null,"SJAG_04508":null,"SJAG_04574":null,"SJAG_04623":null,"SJAG_04670":null,"SJAG_05329":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"pericentric heterochromatin","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0002137","GO:0062199","GO:0031618","GO:0034507"],"synonyms":[{"name":"centric heterochromatin","type":"exact"},{"name":"centromeric heterochromatin","type":"exact"},{"name":"chromosome, centric outer repeat region","type":"related"},{"name":"chromosome, centromeric inner repeat region","type":"related"},{"name":"chromosome, centromeric outer repeat region","type":"related"},{"name":"nuclear centric heterochromatin","type":"narrow"},{"name":"nuclear cluster","type":"narrow"},{"name":"nuclear pericentric heterochromatin","type":"narrow"}],"termid":"GO:0005721","terms_by_termid":{"GO:0005721":null}}


id: GO:0006924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A T cell apoptotic process that occurs towards the end of the expansion phase following the initial activation of mature T cells by antigen and is triggered by T cell receptor stimulation and signals transmitted via various surface-expressed members of the TNF receptor family such as Fas ligand, Fas, and TNF and the p55 and p75 TNF receptors.","definition_xrefs":["ISBN:0781765196","PMID:12414721","PMID:12752672","GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"},{"relation_name":"part_of","term_name":"T cell homeostasis","termid":"GO:0043029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation-induced cell death of T cells","synonyms":[{"name":"AICD","type":"broad"},{"name":"activated T cell apoptosis","type":"broad"},{"name":"activation-induced cell death of T lymphocytes","type":"exact"},{"name":"activation-induced cell death of T-cells","type":"exact"},{"name":"activation-induced cell death of T-lymphocytes","type":"exact"},{"name":"antigen-driven apoptosis","type":"broad"}],"termid":"GO:0006924"}


id: GO:0033748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2 + A = AH2.","definition_xrefs":["EC:1.12.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydrogenase (acceptor) activity","secondary_identifiers":["RHEA:12116","MetaCyc:RXN0-4141"],"synonyms":[{"name":"H2 producing hydrogenase activity","type":"broad"},{"name":"hydrogen-lyase activity","type":"broad"},{"name":"hydrogen:(acceptor) oxidoreductase activity","type":"related"},{"name":"hydrogen:acceptor oxidoreductase activity","type":"related"},{"name":"hydrogenlyase activity","type":"broad"},{"name":"uptake hydrogenase activity","type":"broad"}],"termid":"GO:0033748"}


id: GO:0051329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase following cytokinesis which begins with G1 phase, proceeds through S phase and G2 phase and ends when mitotic prophase begins. During interphase the cell readies itself for mitosis and the replication of its DNA occurs.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interphase","termid":"GO:0051325"},{"relation_name":"is_a","term_name":"mitotic cell cycle phase","termid":"GO:0098763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitotic interphase","synonyms":[{"name":"interphase of mitotic cell cycle","type":"exact"}],"termid":"GO:0051329"}


id: GO:0033598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mammary gland epithelial cells, resulting in the expansion of a cell population. Mammary gland epithelial cells make up the covering of surfaces of the mammary gland. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"mammary gland epithelium development","termid":"GO:0061180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland epithelial cell proliferation","termid":"GO:0033598"}


id: PBO:0027812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_mitotic_spindle_during_metaphase","termid":"PBO:0027812"}


id: GO:2001030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular glucuronidation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of cellular glucuronidation","termid":"GO:2001029"},{"relation_name":"negatively_regulates","term_name":"cellular glucuronidation","termid":"GO:0052695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"negative regulation of cellular glucuronidation","synonyms":[{"name":"negative regulation of cellular glucuronide biosynthesis","type":"exact"},{"name":"negative regulation of cellular glucuronide biosynthetic process","type":"exact"},{"name":"negative regulation of cellular glucuronoside biosynthesis","type":"exact"},{"name":"negative regulation of cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:2001030"}


id: PATO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000313 color saturation value (obsolete PATO:0000313)","termid":"PATO:0000313"}


id: PBO:0079148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN9 intronic transcript 1","termid":"PBO:0079148"}


id: GO:0070911
data:
  {"annotated_genes":["SJAG_04778"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84211],"is_not":false,"summary":null,"term":"GO:0070911"}]},"cv_name":"biological_process","definition":"The nucleotide-excision repair process in which DNA lesions are removed from nontranscribed strands and from transcriptionally silent regions over the entire genome.","definition_xrefs":["PMID:18794354","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04778":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"global genome nucleotide-excision repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GG-NER","type":"exact"},{"name":"GGR","type":"exact"},{"name":"global genome NER","type":"exact"},{"name":"global genomic nucleotide-excision repair","type":"exact"},{"name":"global genomic repair","type":"exact"}],"termid":"GO:0070911","terms_by_termid":{"GO:0070911":null}}


id: PBO:0056731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEST intronic transcript 1, antisense RNA","termid":"PBO:0056731"}


id: MOD:01545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01545"}


id: GO:2001277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-leucine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"is_a","term_name":"regulation of L-leucine biosynthetic process","termid":"GO:2001276"},{"relation_name":"negatively_regulates","term_name":"L-leucine biosynthetic process","termid":"GO:0009098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of L-leucine biosynthetic process","synonyms":[{"name":"negative regulation of L-leucine anabolism","type":"exact"},{"name":"negative regulation of L-leucine biosynthesis","type":"exact"},{"name":"negative regulation of L-leucine formation","type":"exact"},{"name":"negative regulation of L-leucine synthesis","type":"exact"},{"name":"negative regulation of leucine biosynthetic process","type":"broad"}],"termid":"GO:2001277"}


id: GO:0043649
data:
  {"annotated_genes":["SJAG_00937","SJAG_00714","SJAG_03434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[107963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[78475,87727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_00937":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"dicarboxylic acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"dicarboxylate catabolic process","type":"exact"},{"name":"dicarboxylate catabolism","type":"exact"},{"name":"dicarboxylic acid breakdown","type":"exact"},{"name":"dicarboxylic acid catabolism","type":"exact"},{"name":"dicarboxylic acid degradation","type":"exact"}],"termid":"GO:0043649","terms_by_termid":{"GO:0006533":null,"GO:0006538":null,"GO:0019266":null}}


id: PBO:0060628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCKAP5 antisense RNA 2","termid":"PBO:0060628"}


id: FYPO:0003794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell is normal (i.e. indistinguishable from wild type) during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular glycerol level during cellular response to osmotic stress","synonyms":[{"name":"normal cellular glycerol accumulation during cellular response to osmotic stress","type":"related"},{"name":"normal cellular glycerol level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal cellular glycerol level during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0003794"}


id: PBO:0079871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF1 RNA helicase and ATPase","termid":"PBO:0079871"}


id: PBO:0046233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 27","termid":"PBO:0046233"}


id: GO:1905356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snRNA pseudouridine synthesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27268497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"snRNA pseudouridine synthesis","termid":"GO:0031120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"regulation of snRNA pseudouridine synthesis","termid":"GO:1905356"}


id: GO:0099401
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a caveola that extends into the cytoplasm, excluding the neck (rim). This region is associated with intracellular caveola proteins.","definition_xrefs":["GOC:PARL","GOC:POD","PMID:17227843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane microdomain","termid":"GO:0098857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"caveola bulb","synonyms":[{"name":"caveola crater","type":"exact"}],"termid":"GO:0099401"}


id: PBO:0077215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 7 homolog","termid":"PBO:0077215"}


id: PBO:0061556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, cytosolic pseudogene 3","termid":"PBO:0061556"}


id: PBO:0083724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 107kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane prior to SNARE-mediated fusion; involved in assembly of the exocyst complex; required with Sec3p for ER inheritance where it promotes anchoring of the cortical ER at the bud tip","termid":"PBO:0083724"}


id: FYPO:0006933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of butylated hydroxytoluene (dibutylhydroxytoluene; BHT) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to butylated hydroxytoluene","synonyms":[{"name":"resistance to 2,6-di-tert-butyl-4-methylphenol","type":"exact"},{"name":"resistance to BHT","type":"exact"},{"name":"resistance to butylated hydroxytoluene during mitotic cell cycle","type":"related"},{"name":"resistance to butylated hydroxytoluene during vegetative growth","type":"exact"},{"name":"resistance to dibutylhydroxytoluene","type":"exact"},{"name":"resistant to BHT","type":"exact"},{"name":"resistant to butylated hydroxytoluene","type":"exact"}],"termid":"FYPO:0006933"}


id: PBO:0091888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M20 protein involved in glutathione catabolism","termid":"PBO:0091888"}


id: GO:0019320
data:
  {"annotated_genes":["SJAG_06622","SJAG_03660","SJAG_02369","SJAG_04192","SJAG_03828","SJAG_00461","SJAG_00605","SJAG_00027","SJAG_02945","SJAG_00839","SJAG_01209","SJAG_03903","SJAG_04334","SJAG_02796","SJAG_02135","SJAG_04495","SJAG_06621","SJAG_02107","SJAG_01310","SJAG_02009","SJAG_03373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91058,100580,101574,101939,105060,105522,94066,105523,99753,101940,105057,105524,105526,101573,112522,105059,105525,105527,105061,105056,99491,90567,94346,101575,105058,105062,105521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[105028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019388"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01209":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"hexose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hexose breakdown","type":"exact"},{"name":"hexose catabolism","type":"exact"},{"name":"hexose degradation","type":"exact"}],"termid":"GO:0019320","terms_by_termid":{"GO:0019388":null,"GO:0061621":null}}


id: PBO:0083286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified gene YNK1","termid":"PBO:0083286"}


id: PR:Q09826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sds23 gene.","definition_xrefs":["UniProtKB:Q09826","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sds23/moc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.13","synonyms":[{"name":"Spom972h-sds23","type":"exact"},{"name":"multicopy suppressor of overexpressed cyr1 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphoprotein at stationary phase 1 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09826"}


id: GO:0071371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gonadotropin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to gonadotropin","termid":"GO:0034698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gonadotropin stimulus","synonyms":[{"name":"cellular response to gonadotrophin stimulus","type":"exact"}],"termid":"GO:0071371"}


id: PBO:0049398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametocyte specific factor 1","termid":"PBO:0049398"}


id: GO:0015795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sorbitol across a membrane. Sorbitol, also known as glucitol, is the hexitol derived by the reduction of the aldehyde group of glucose.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"sorbitol transmembrane transport","synonyms":[{"name":"glucitol transport","type":"exact"},{"name":"sorbitol transport","type":"broad"}],"termid":"GO:0015795"}


id: GO:0035131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the pelvic fin are generated and organized. The pelvic fins are bilaterally paired fins mounted in a ventral-lateral position on most fish. These fins are used primarily for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"is_a","term_name":"pelvic fin morphogenesis","termid":"GO:0035139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic pelvic fin morphogenesis","termid":"GO:0035131"}


id: PBO:0004550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Rsv2","termid":"PBO:0004550"}


id: PBO:0074942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 107","termid":"PBO:0074942"}


id: PBO:0062205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily A member 2","termid":"PBO:0062205"}


id: PBO:0050135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 45","termid":"PBO:0050135"}


id: PBO:0052190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMA1 antisense RNA 3","termid":"PBO:0052190"}


id: PBO:0062018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 9 pseudogene","termid":"PBO:0062018"}


id: PBO:0068022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 327","termid":"PBO:0068022"}


id: PBO:0031555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peptidase_activity","termid":"PBO:0031555"}


id: PBO:0045913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 9","termid":"PBO:0045913"}


id: GO:2000648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stem cell proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"positively_regulates","term_name":"stem cell proliferation","termid":"GO:0072089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stem cell proliferation","termid":"GO:2000648"}


id: PBO:0055849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 1","termid":"PBO:0055849"}


id: PBO:0003558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-A, phosphatidylinositol N-acetylglucosaminyltransferase subunit Gpi3 (predicted)","termid":"PBO:0003558"}


id: PBO:0047202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 217 member B","termid":"PBO:0047202"}


id: PBO:0075118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 167","termid":"PBO:0075118"}


id: PBO:0070243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 183 pseudogene","termid":"PBO:0070243"}


id: PBO:0085516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S16 and bacterial S9; RPS16B has a paralog, RPS16A, that arose from the whole genome duplication","termid":"PBO:0085516"}


id: PBO:0043581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XIII alpha 1 chain","termid":"PBO:0043581"}


id: PBO:0004342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S27 (predicted)","termid":"PBO:0004342"}


id: GO:0004584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an alpha-D-mannosyl residue from dolichyl-phosphate D-mannose into membrane lipid-linked oligosaccharide.","definition_xrefs":["EC:2.4.1.130"],"gene_count":0,"genotype_count":0,"name":"obsolete dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity (obsolete GO:0004584)","secondary_identifiers":["MetaCyc:2.4.1.130-RXN"],"synonyms":[{"name":"dolichol phosphomannose-oligosaccharide-lipid mannosyltransferase activity","type":"related"},{"name":"dolichyl-phosphate-D-mannose:glycolipid alpha-D-mannosyltransferase activity","type":"related"},{"name":"oligomannosylsynthase activity","type":"broad"}],"termid":"GO:0004584"}


id: GO:0052894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: norspermine + oxygen + H2O = norspermidine + 3-aminopropanal + hydrogen peroxide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete norspermine:oxygen oxidoreductase activity (obsolete GO:0052894)","termid":"GO:0052894"}


id: GO:1902106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte differentiation.","definition_xrefs":["GOC:TermGenie","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"is_a","term_name":"negative regulation of hemopoiesis","termid":"GO:1903707"},{"relation_name":"negatively_regulates","term_name":"leukocyte differentiation","termid":"GO:0002521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte differentiation","synonyms":[{"name":"down regulation of immune cell differentiation","type":"exact"},{"name":"down regulation of leucocyte differentiation","type":"exact"},{"name":"down regulation of leukocyte differentiation","type":"exact"},{"name":"down-regulation of immune cell differentiation","type":"exact"},{"name":"down-regulation of leucocyte differentiation","type":"exact"},{"name":"down-regulation of leukocyte differentiation","type":"exact"},{"name":"downregulation of immune cell differentiation","type":"exact"},{"name":"downregulation of leucocyte differentiation","type":"exact"},{"name":"downregulation of leukocyte differentiation","type":"exact"},{"name":"inhibition of immune cell differentiation","type":"narrow"},{"name":"inhibition of leucocyte differentiation","type":"narrow"},{"name":"inhibition of leukocyte differentiation","type":"narrow"},{"name":"negative regulation of immune cell differentiation","type":"exact"},{"name":"negative regulation of leucocyte differentiation","type":"exact"}],"termid":"GO:1902106"}


id: FYPO:0006963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-methyladenosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular 1-methyladenosine level","synonyms":[{"name":"increased 1-methyladenosine accumulation","type":"related"},{"name":"increased cellular 1-methyladenosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular 1-methyladenosine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006963"}


id: PR:Q9P7J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.06 gene.","definition_xrefs":["UniProtKB:Q9P7J9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.06","synonyms":[{"name":"Spom972h-SPCC24B10.06","type":"exact"}],"termid":"PR:Q9P7J9"}


id: GO:0021923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain region that is adjacent to the ventricular cavity.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","PMID:12593981","GOC:dgh","GOC:dph","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain","termid":"GO:0021534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}


id: PBO:0085620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in early stages of meiotic recombination; required for meiotic crossing over; forms a complex with Rec102p and Spo11p necessary during the initiation of recombination","termid":"PBO:0085620"}


id: GO:0033963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 5,6alpha-epoxy-5alpha-cholestan-3beta-ol + H2O = cholestane-3beta-5alpha,6beta-triol, and 5,6beta-epoxy-5beta-cholestan-3beta-ol + H2O = cholestane-3beta-5alpha,6beta-triol.","definition_xrefs":["EC:3.3.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cholesterol-5,6-oxide hydrolase activity","synonyms":[{"name":"5,6alpha-epoxy-5alpha-cholestan-3beta-ol hydrolase activity","type":"related"},{"name":"ChEH","type":"related"},{"name":"cholesterol-epoxide hydrolase activity","type":"related"}],"termid":"GO:0033963"}


id: MOD:00335
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-threonine residue by a thioether bond to form (2S,3S,2'R)-3-methyllanthionine sulfoxide.","definition_xrefs":["RESID:AA0330","PubMed:7737178","PubMed:9219543"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"3-methyllanthionine","termid":"MOD:01981"},{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3S,2'R)-3-methyllanthionine sulfoxide","synonyms":[{"name":"(2S,3S,4Xi,6R)-2,6-diamino-3-methyl-4-oxo-4-thiaheptanedioic acid","type":"exact"},{"name":"(2S,3S,SXi)-2-amino-3-([(R)-2-amino-2-carboxyethyl]sulfinyl)butanoic acid","type":"exact"},{"name":"3-methyl-L-lanthionine S-oxide","type":"exact"},{"name":"3-methyl-L-lanthionine sulfoxide","type":"exact"},{"name":"CROSSLNK Beta-methyllanthionine sulfoxide (Thr-Cys)","type":"exact"},{"name":"S-oxy-3-methyllanthionine","type":"exact"}],"termid":"MOD:00335"}


id: PR:O74814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulation of nuclear pre-mRNA domain-containing protein 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0400 protein C337.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.03","secondary_identifiers":["UniProtKB:O74814"],"synonyms":[{"name":"Spom972h-RPRD1A","type":"exact"}],"termid":"PR:O74814"}


id: PBO:0027521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle","termid":"PBO:0027521"}


id: GO:1902503
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of adenylyltransferase activity.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:11713534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"adenylyltransferase complex","synonyms":[{"name":"ThiF-ThiS complex","type":"related"}],"termid":"GO:1902503"}


id: PBO:0065742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal testis enriched protein 1","termid":"PBO:0065742"}


id: PBO:0067553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 704, pseudogene","termid":"PBO:0067553"}


id: PBO:0045020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent protein kinase domain 2B","termid":"PBO:0045020"}


id: GO:0003854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxy-delta(5)-steroid + NAD+ = a 3-oxo-delta(5)-steroid + NADH + H+. Also acts on on 3-beta-hydroxypregn-5-en-20-one to form progesterone.","definition_xrefs":["EC:1.1.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-beta-hydroxy-delta5-steroid dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-192097","Reactome:R-HSA-193789","Reactome:R-HSA-193816","Reactome:R-HSA-196350","MetaCyc:1.1.1.145-RXN","Reactome:R-HSA-196372"],"synonyms":[{"name":"3-beta-hydroxy-5-ene steroid dehydrogenase activity","type":"related"},{"name":"3-beta-hydroxy-D5-steroid dehydrogenase activity","type":"exact"},{"name":"3beta-HSDH","type":"related"},{"name":"3beta-hydroxy steroid dehydrogenase/isomerase activity","type":"related"},{"name":"3beta-hydroxy-5-ene steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-5-ene-steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-5-ene-steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid dehydrogenase/isomerase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid oxidoreductase","type":"broad"},{"name":"3beta-hydroxy-delta5-steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-delta5-steroid:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"5-ene-3-beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"delta5-3beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"progesterone reductase activity","type":"broad"},{"name":"steroid-delta5-3beta-ol dehydrogenase activity","type":"related"}],"termid":"GO:0003854"}


id: PBO:0048611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 3 pseudogene","termid":"PBO:0048611"}


id: FYPO:0006137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-stearoylglycerophosphocholine (18:0) measured in a cell is higher than normal.","definition_xrefs":["PMID:28667014","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular 1-stearoylglycerophosphocholine (18:0) level","synonyms":[{"name":"increased 1-stearoylglycerophosphocholine (18:0) accumulation","type":"related"},{"name":"increased cellular 1-stearoyl-sn-glycero-3-phosphocholine level","type":"exact"},{"name":"increased cellular 1-stearoylglycerophosphocholine (18:0) level during mitotic cell cycle","type":"related"},{"name":"increased cellular 1-stearoylglycerophosphocholine (18:0) level during vegetative growth","type":"exact"}],"termid":"FYPO:0006137"}


id: PBO:0063505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase regulatory subunit","termid":"PBO:0063505"}


id: PBO:0028708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_double-strand_break_sites","termid":"PBO:0028708"}


id: PBO:0004103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Vps902 (predicted)","termid":"PBO:0004103"}


id: PBO:0067247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 320, pseudogene","termid":"PBO:0067247"}


id: GO:0061509
data:
  {"annotated_genes":["SJAG_04455","SJAG_00229","SJAG_03508","SJAG_01790","SJAG_06270","SJAG_02514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89492,91693,97356,101149,103667,106306],"is_not":false,"summary":null,"term":"GO:0061509"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained to the old mitotic spindle pole body resulting in its being distributed asymmetrically.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric protein localization to old or new spindle pole body","termid":"GO:0061492"},{"relation_name":"is_a","term_name":"protein localization to mitotic spindle pole body","termid":"GO:1902440"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_03508":null,"SJAG_04455":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"asymmetric protein localization to old mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061509","terms_by_termid":{"GO:0061509":null}}


id: GO:0045239
data:
  {"annotated_genes":["SJAG_01524","SJAG_02464","SJAG_03290","SJAG_03813","SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106263,108217,83461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045252"},{"annotations":[111127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042709"},{"annotations":[85945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009361"}]},"cv_name":"cellular_component","definition":"Any of the heteromeric enzymes that act in the TCA cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_02464":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tricarboxylic acid cycle heteromeric enzyme complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TCA cycle enzyme complex","type":"exact"}],"termid":"GO:0045239","terms_by_termid":{"GO:0009361":null,"GO:0042709":null,"GO:0045252":null}}


id: GO:0009632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete freezing tolerance (obsolete GO:0009632)","synonyms":[{"name":"freezing tolerance","type":"exact"}],"termid":"GO:0009632"}


id: PBO:0078800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 18-1","termid":"PBO:0078800"}


id: PR:000027574
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:11242054","PomBase:MAH","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1 (Schizosaccharomyces pombe)","termid":"PR:000027570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"Spom-hht1/InitMet-","type":"exact"}],"termid":"PR:000027574"}


id: PBO:0047075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member D, pseudogene","termid":"PBO:0047075"}


id: GO:0047213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanidin + UDP-D-glucose = anthocyanidin-3-O-D-glucoside + UDP.","definition_xrefs":["MetaCyc:2.4.1.115-RXN","EC:2.4.1.115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"anthocyanidin 3-O-glucosyltransferase activity","secondary_identifiers":["RHEA:20093"],"synonyms":[{"name":"3-GT activity","type":"related"},{"name":"UDP-D-glucose:anthocyanidin 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:anthocyanidin 3-O-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:anthocyanidin/flavonol 3-O-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:cyanidin-3-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-anthocyanidin 3-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047213"}


id: PBO:0061520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding SET domain protein 3","termid":"PBO:0061520"}


id: GO:0015816
data:
  {"annotated_genes":["SJAG_00626","SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94302,96322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"}]},"cv_name":"biological_process","definition":"The directed movement of glycine, aminoethanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00626":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glycine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015816","terms_by_termid":{"GO:1904983":null}}


id: PR:Q9P7R0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aro1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7R0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafunctional AROM polypeptide (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.02","synonyms":[{"name":"Spom972h-aro1","type":"exact"}],"termid":"PR:Q9P7R0"}


id: FYPO:0007219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in regions containing protein-coding genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:31260531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"normal histone H3-K14 acetylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K14 acetylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"normal histone H3K14 acetylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007219"}


id: PBO:0052435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin light chain 2","termid":"PBO:0052435"}


id: PBO:0059860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational initiation factor 3","termid":"PBO:0059860"}


id: PBO:0084119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme a synthase; required for the hydroxylation of heme O to form heme A, an essential prosthetic group for cytochrome c oxidase; oligomerization is required for function","termid":"PBO:0084119"}


id: GO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2 (either eIF2 in eukaryotes, or IF2 in prokaryotes). In prokaryotes, fMet-tRNA (initiator) is used rather than Met-tRNA (initiator).","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"translational initiation","termid":"GO:0006413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"formation of translation initiation ternary complex","synonyms":[{"name":"translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:0001677"}


id: GO:0106379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-(d)RTP + H20 = 8-oxo-(d)RMP + diphosphate + H+.","definition_xrefs":["PMID:11139615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0047429","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"8-oxo-(d)RTP hydrolase activity","secondary_identifiers":["EC:3.6.1.9","Reactome:R-HSA-9731228"],"termid":"GO:0106379"}


id: PBO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds Homol D","termid":"PBO:0002158"}


id: GO:0160069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of surfactant by a cell or tissue.","definition_xrefs":["PMID:19824815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"part_of","term_name":"surfactant homeostasis","termid":"GO:0043129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"surfactant secretion","termid":"GO:0160069"}


id: PBO:0055836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRFN5 divergent transcript","termid":"PBO:0055836"}


id: GO:0021651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 1 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:curators","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 1 development","termid":"GO:0021567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 1 morphogenesis","termid":"GO:0021651"}


id: PBO:0087922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that is activated by a MAPK signaling cascade; activates genes involved in mating or pseudohyphal/invasive growth pathways; cooperates with Tec1p transcription factor to regulate genes specific for invasive growth","termid":"PBO:0087922"}


id: PBO:0075588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor, Kunitz type 1","termid":"PBO:0075588"}


id: PBO:0075943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 2","termid":"PBO:0075943"}


id: PATO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's not increasing over time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-progressive","termid":"PATO:0002026"}


id: PBO:0030574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_leucine_level","termid":"PBO:0030574"}


id: GO:1900508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iron-sulfur-molybdenum cofactor assembly.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur-molybdenum cofactor assembly","termid":"GO:1900506"},{"relation_name":"is_a","term_name":"positive regulation of iron-sulfur cluster assembly","termid":"GO:1903331"},{"relation_name":"positively_regulates","term_name":"iron-sulfur-molybdenum cofactor assembly","termid":"GO:0044593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"positively_regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0016226"],"is_obsolete":false,"name":"positive regulation of iron-sulfur-molybdenum cofactor assembly","synonyms":[{"name":"activation of FeMoco assembly","type":"exact"},{"name":"activation of FeMoco biosynthetic process","type":"exact"},{"name":"activation of iron molybdenum cofactor assembly","type":"exact"},{"name":"activation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"activation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"activation of iron-sulfur-molybdenum cofactor assembly","type":"narrow"},{"name":"positive regulation of FeMoco assembly","type":"exact"},{"name":"positive regulation of FeMoco biosynthetic process","type":"exact"},{"name":"positive regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"positive regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"positive regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"up regulation of FeMoco assembly","type":"exact"},{"name":"up regulation of FeMoco biosynthetic process","type":"exact"},{"name":"up regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"up regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"up regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"up regulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"},{"name":"up-regulation of FeMoco assembly","type":"exact"},{"name":"up-regulation of FeMoco biosynthetic process","type":"exact"},{"name":"up-regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"up-regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"up-regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"up-regulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"},{"name":"upregulation of FeMoco assembly","type":"exact"},{"name":"upregulation of FeMoco biosynthetic process","type":"exact"},{"name":"upregulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"upregulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"upregulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"upregulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"}],"termid":"GO:1900508"}


id: PBO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.23.-","termid":"PBO:0002001"}


id: PBO:0046677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended synaptotagmin 3","termid":"PBO:0046677"}


id: PBO:0068665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 46, pseudogene","termid":"PBO:0068665"}


id: PBO:0061761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase like","termid":"PBO:0061761"}


id: PBO:0005405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Got1 (predicted)","termid":"PBO:0005405"}


id: GO:0060726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate or frequency of coreceptor activity involved in epidermal growth factor receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060726)","synonyms":[{"name":"regulation of Neu/ErbB-2 receptor activity","type":"narrow"},{"name":"regulation of coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060726"}


id: SO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of insertion where the inserted sequence is a mobile element.","definition_xrefs":["EBI:dvga"],"direct_ancestors":[{"relation_name":"contains","term_name":"mobile_genetic_element","termid":"SO:0001037"},{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_element_insertion","synonyms":[{"name":"mobile element insertion","type":"exact"}],"termid":"SO:0001837"}


id: PBO:0071444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 50","termid":"PBO:0071444"}


id: GO:0006618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the signal peptide from a nascent protein during cotranslational membrane targeting.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal peptide processing","termid":"GO:0006465"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0006605","GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, signal sequence processing","synonyms":[{"name":"SRP-dependent cotranslational membrane targeting, signal sequence processing","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, signal sequence processing","type":"exact"},{"name":"signal sequence processing during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006618"}


id: GO:0000294
data:
  {"annotated_genes":["SJAG_03952","SJAG_03234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92559,100887],"is_not":false,"summary":null,"term":"GO:0000294"}]},"cv_name":"biological_process","definition":"A minor MRP-dependent nuclear-transcribed mRNA degradation pathway that begins with an endonucleolytic cleavage to generate unprotected ends.","definition_xrefs":["PMID:14729943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03234":null,"SJAG_03952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, RNase MRP-dependent","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear mRNA catabolic process, endonucleolytic cleavage-dependent decay","type":"exact"},{"name":"nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay","type":"related"}],"termid":"GO:0000294","terms_by_termid":{"GO:0000294":null}}


id: GO:0046145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of D-alanine and related amino acids.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete D-alanine family amino acid biosynthetic process (obsolete GO:0046145)","synonyms":[{"name":"D-alanine family amino acid anabolism","type":"exact"},{"name":"D-alanine family amino acid biosynthesis","type":"exact"},{"name":"D-alanine family amino acid formation","type":"exact"},{"name":"D-alanine family amino acid synthesis","type":"exact"}],"termid":"GO:0046145"}


id: FYPO:0000537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein secretion does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein secretion during vegetative growth","termid":"FYPO:0000536"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein secretion during vegetative growth","synonyms":[{"name":"abolished protein secretion during mitotic cell cycle","type":"related"},{"name":"absent protein secretion during vegetative growth","type":"exact"},{"name":"protein secretion abolished during vegetative growth","type":"exact"},{"name":"protein secretion: absent","type":"related"}],"termid":"FYPO:0000537"}


id: PATO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the presence of long chain aliphatic lipids on the surface of an organism.","definition_xrefs":["PATOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waxiness","termid":"PATO:0002381"}


id: PR:O43000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- liz1 gene.","definition_xrefs":["UniProtKB:O43000","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transporter liz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.01c","synonyms":[{"name":"Spom972h-liz1","type":"exact"}],"termid":"PR:O43000"}


id: GO:1904009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium glutamate stimulus.","definition_xrefs":["PMID:20704590","GO_REF:0000071","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to monosodium glutamate (obsolete GO:1904009)","termid":"GO:1904009"}


id: PBO:0034710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nrd1 comples RNA-binding subunit Seb1","termid":"PBO:0034710"}


id: PBO:0078192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-2 (pseudogene)","termid":"PBO:0078192"}


id: PBO:0017762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Rcf1","termid":"PBO:0017762"}


id: PBO:0062387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 7 pseudogene","termid":"PBO:0062387"}


id: PBO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 33B","termid":"PBO:0052793"}


id: PBO:0039202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 5","termid":"PBO:0039202"}


id: GO:1905614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11606552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of developmental vegetative growth","termid":"GO:1905613"},{"relation_name":"negatively_regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of developmental vegetative growth","synonyms":[{"name":"down regulation of developmental vegetative growth","type":"exact"},{"name":"down-regulation of developmental vegetative growth","type":"exact"},{"name":"downregulation of developmental vegetative growth","type":"exact"},{"name":"inhibition of developmental vegetative growth","type":"narrow"}],"termid":"GO:1905614"}


id: PBO:0075181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 11","termid":"PBO:0075181"}


id: GO:0004407
data:
  {"annotated_genes":["SJAG_03627","SJAG_03844","SJAG_04186","SJAG_01075","SJAG_00581","SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93288,105600,108260],"is_not":false,"summary":null,"term":"GO:0004407"},{"annotations":[105601,108261,100309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[100310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990162"},{"annotations":[105602,100311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[105603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[93289,100312,105604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[105605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[105606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[86087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[86088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[100314,110580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[100315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction represents the removal of an acetyl group from a histone, a class of proteins complexed to DNA in chromatin and chromosomes.","definition_xrefs":["PMID:9893272","RHEA:58196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"protein lysine deacetylase activity","termid":"GO:0033558"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_01075":null,"SJAG_03627":null,"SJAG_03844":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0033558","GO:0016810","GO:0140096","GO:0019213","GO:0016787"],"is_obsolete":false,"name":"histone deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3782655","Reactome:R-HSA-3777129","Reactome:R-HSA-2545203","Reactome:R-HSA-433672","Reactome:R-HSA-427514","Reactome:R-HSA-6805650","Reactome:R-HSA-3769447","Reactome:R-HSA-3782637","EC:3.5.1.98","MetaCyc:3.5.1.98-RXN","Reactome:R-HSA-2545253"],"termid":"GO:0004407","terms_by_termid":{"GO:0004407":null,"GO:0031078":null,"GO:0032041":null,"GO:0032129":null,"GO:0034739":null,"GO:0046969":null,"GO:0046970":null,"GO:0140765":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null,"GO:1990162":null}}


id: GO:2000231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic stellate cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast proliferation","termid":"GO:0048146"},{"relation_name":"is_a","term_name":"regulation of pancreatic stellate cell proliferation","termid":"GO:2000229"},{"relation_name":"positively_regulates","term_name":"pancreatic stellate cell proliferation","termid":"GO:0072343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic stellate cell proliferation","termid":"GO:2000231"}


id: PBO:0082752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat; required for cargo selection during vesicle formation in ER to Golgi transport; homologous to Sfb3p; SFB2 has a paralog, SEC24, that arose from the whole genome duplication","termid":"PBO:0082752"}


id: PBO:0045104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in malignant brain tumors 1","termid":"PBO:0045104"}


id: PBO:0041095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRWD1 intronic transcript 1","termid":"PBO:0041095"}


id: PBO:0041038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated ATM activator 1","termid":"PBO:0041038"}


id: GO:0045600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adipocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of fat cell differentiation","termid":"GO:0045598"},{"relation_name":"positively_regulates","term_name":"fat cell differentiation","termid":"GO:0045444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fat cell differentiation","synonyms":[{"name":"activation of fat cell differentiation","type":"narrow"},{"name":"positive regulation of adipocyte cell differentiation","type":"exact"},{"name":"positive regulation of adipocyte differentiation","type":"exact"},{"name":"stimulation of fat cell differentiation","type":"narrow"},{"name":"up regulation of fat cell differentiation","type":"exact"},{"name":"up-regulation of fat cell differentiation","type":"exact"},{"name":"upregulation of fat cell differentiation","type":"exact"}],"termid":"GO:0045600"}


id: PBO:0080816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 1","termid":"PBO:0080816"}


id: PBO:0000182
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness","termid":"PBO:0000182"}


id: PBO:0066983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 286","termid":"PBO:0066983"}


id: GO:0006634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hexadecanal, the C16 straight chain aldehyde.","direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"hexadecanal metabolic process","termid":"GO:0046458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hexadecanal biosynthetic process","synonyms":[{"name":"hexadecanal anabolism","type":"exact"},{"name":"hexadecanal biosynthesis","type":"exact"},{"name":"hexadecanal formation","type":"exact"},{"name":"hexadecanal synthesis","type":"exact"},{"name":"palmitaldehyde biosynthesis","type":"exact"},{"name":"palmitaldehyde biosynthetic process","type":"exact"}],"termid":"GO:0006634"}


id: SO:0001902
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region surrounding a cis_splice site, either within 1-3 bases of the exon or 3-8 bases of the intron.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"},{"relation_name":"part_of","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_region","synonyms":[{"name":"splice region","type":"related"}],"termid":"SO:0001902"}


id: PBO:0052641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 9","termid":"PBO:0052641"}


id: GO:0043780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cobalt-precorrin 5B + S-adenosylmethionine = S-adenosylhomocysteine + cobalt-precorrin 6A.","definition_xrefs":["MetaCyc:RXN-8764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cobalt-precorrin-5B C1-methyltransferase activity","secondary_identifiers":["RHEA:26285"],"synonyms":[{"name":"cobalt-precorrin 5B C1-methyltransferase activity","type":"exact"}],"termid":"GO:0043780"}


id: PBO:0076091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STUB1 divergent transcript","termid":"PBO:0076091"}


id: GO:0045050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein insertion into the endoplasmic reticulum (ER) membrane in which stop-transfer membrane-anchor sequences become an ER membrane spanning helix.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into ER membrane","termid":"GO:0045048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein insertion into ER membrane by stop-transfer membrane-anchor sequence","synonyms":[{"name":"protein insertion into ER membrane, stop-transfer membrane-anchor sequence mediated","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane by stop-transfer membrane-anchor sequence","type":"exact"},{"name":"protein-ER insertion by stop-transfer membrane-anchor sequence","type":"exact"},{"name":"protein-endoplasmic reticulum insertion by stop-transfer membrane-anchor sequence","type":"exact"},{"name":"stop-transfer membrane-anchor sequence mediated protein insertion into ER membrane","type":"exact"}],"termid":"GO:0045050"}


id: PBO:0049100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 157","termid":"PBO:0049100"}


id: PBO:0027189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring","termid":"PBO:0027189"}


id: PBO:0085913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; YJL118W is a non-essential gene; deletion enhances the toxicity of heterologously expressed human alpha-synuclein","termid":"PBO:0085913"}


id: PBO:0077016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS3 antisense RNA 1","termid":"PBO:0077016"}


id: GO:0019204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphopolynucleotide + H2O = polynucleotide + phosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide phosphatase activity (obsolete GO:0019204)","synonyms":[{"name":"nucleotide phosphatase activity","type":"exact"}],"termid":"GO:0019204"}


id: PBO:0043120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine induced apoptosis inhibitor 1","termid":"PBO:0043120"}


id: PBO:0040404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 5","termid":"PBO:0040404"}


id: GO:0042926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of 3-hydroxyphenylpropionic acid from one side of a membrane to the other.","definition_xrefs":["GOC:jl","PMID:9098055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"3-hydroxyphenylpropionic acid transmembrane transporter activity","synonyms":[{"name":"3-(3-hydroxyphenyl)propionic acid transporter activity","type":"exact"},{"name":"3-hydroxyphenylpropionic acid transporter activity","type":"related"},{"name":"m-hydroxyphenylpropionic acid transporter activity","type":"exact"}],"termid":"GO:0042926"}


id: PBO:0048671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase beta 1 like","termid":"PBO:0048671"}


id: GO:0072265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric capsule are generated and organized. The metanephric capsule is the tough fibrous layer surrounding the metanephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule morphogenesis","termid":"GO:0072128"},{"relation_name":"part_of","term_name":"metanephric capsule development","termid":"GO:0072213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric capsule morphogenesis","termid":"GO:0072265"}


id: GO:0030657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of coenzyme and prosthetic group metabolic process (obsolete GO:0030657)","synonyms":[{"name":"regulation of coenzyme and prosthetic group metabolic process","type":"exact"}],"termid":"GO:0030657"}


id: GO:0018886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbon tetrachloride, a toxic, carcinogenic compound which is used as a general solvent in industrial degreasing operations, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon tetrachloride metabolic process","termid":"GO:0018885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic carbon tetrachloride metabolic process","secondary_identifiers":["UM-BBD_pathwayID:ctc"],"synonyms":[{"name":"anaerobic carbon tetrachloride metabolism","type":"exact"}],"termid":"GO:0018886"}


id: PBO:0047591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGGY divergent transcript","termid":"PBO:0047591"}


id: PBO:0007592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA Mue16","termid":"PBO:0007592"}


id: GO:0033070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of ansamycins, any of a group of complex macrolactam compounds characterized by a cyclic structure in which an aliphatic ansa chain forms a bridge between two non-adjacent positions of a cyclic p-system; many exhibit antibacterial, antifungal or antitumor activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ansamycin metabolic process","termid":"GO:0033069"},{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"ansamycin biosynthetic process","synonyms":[{"name":"ansamycin anabolism","type":"exact"},{"name":"ansamycin biosynthesis","type":"exact"},{"name":"ansamycin formation","type":"exact"},{"name":"ansamycin synthesis","type":"exact"}],"termid":"GO:0033070"}


id: PBO:0043427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide gated channel subunit beta 1","termid":"PBO:0043427"}


id: PBO:0087138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein that associates with polysomes; may be involved in regulating mRNA translation; involved in the copper-dependent mineralization of copper sulfide complexes on cell surface in cells cultured in copper salts; SLF1 has a paralog, SRO9, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087138"}


id: GO:0140645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a neutrophil extracellular trap, a network of extracellular fibers primarily composed of DNA from neutrophils, which bind and neutralizes pathogens.","definition_xrefs":["PMID:28267716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"neutrophic extracellular trap formation","secondary_identifiers":["http://purl.obolibrary.org/obo/TXPO_0002149"],"synonyms":[{"name":"NET formation","type":"broad"}],"termid":"GO:0140645"}


id: PBO:0030867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytokinesis","termid":"PBO:0030867"}


id: PBO:0113547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"v-SNARE component of vacuolar SNARE complex; involved in vesicle fusion; inhibits ATP-dependent Ca(2+) transport activity of Pmc1p in vacuolar membrane; targeted to vacuole via AP-3 pathway","termid":"PBO:0113547"}


id: GO:0038039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains two G protein-coupled receptors (GPCRs) of different subtypes. Formation of a GPCR heterodimer may alter the functional property of the GPCR.","definition_xrefs":["GOC:bf","PMID:16109836","PMID:20150590","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor dimeric complex","termid":"GO:0038037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G protein-coupled receptor heterodimeric complex","synonyms":[{"name":"G-protein coupled receptor heterodimer","type":"exact"},{"name":"G-protein coupled receptor heterodimeric complex","type":"exact"},{"name":"GPCR heterodimer","type":"exact"}],"termid":"GO:0038039"}


id: PBO:0045466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D3","termid":"PBO:0045466"}


id: PBO:0082987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic asparaginyl-tRNA synthetase; required for protein synthesis, catalyzes the specific attachment of asparagine to its cognate tRNA","termid":"PBO:0082987"}


id: PR:P35679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.03c","secondary_identifiers":["UniProtKB:P35679"],"synonyms":[{"name":"L2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBP8B7.03c","type":"related"},{"name":"Spom972h-RPL4","type":"exact"},{"name":"rpl2","type":"related"},{"name":"rpl4","type":"related"}],"termid":"PR:P35679"}


