# terms

id: PBO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endodeoxyribonuclease Pnu1","termid":"PBO:0002543"}


id: PBO:0045965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGLN3 antisense RNA 1","termid":"PBO:0045965"}


id: PR:G2TRR6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2A9.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2A9.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.14","synonyms":[{"name":"Spom972h-SPBC2A9.14","type":"exact"}],"termid":"PR:G2TRR6"}


id: FYPO:0002291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0002291)","synonyms":[{"name":"normal protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0002291"}


id: PBO:0046654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"establishment of sister chromatid cohesion N-acetyltransferase 1","termid":"PBO:0046654"}


id: PBO:0017584
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RTS1","termid":"PBO:0017584"}


id: PBO:0011440
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae OXA1","termid":"PBO:0011440"}


id: PBO:0054148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1515","termid":"PBO:0054148"}


id: GO:0030444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule depolymerization during nuclear congression (obsolete GO:0030444)","synonyms":[{"name":"microtubule depolymerization during nuclear congression","type":"exact"}],"termid":"GO:0030444"}


id: PBO:0077528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 242","termid":"PBO:0077528"}


id: GO:0044650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to a host cell via adhesion molecules, general stickiness etc., either directly or indirectly.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host cell","termid":"GO:0044650"}


id: PR:Q9P6J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inner membrane metabolite transport protein YgcS that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transporter C1683.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.01","secondary_identifiers":["UniProtKB:Q9P6J9"],"synonyms":[{"name":"Spom972h-ygcS","type":"exact"}],"termid":"PR:Q9P6J9"}


id: GO:0170049
data:
  {"annotated_genes":["SJAG_00943","SJAG_02350","SJAG_00744","SJAG_02377","SJAG_03410"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106332,107485,90166,104217,94859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031428"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex consisting of a box C/D type snRNA and three (Archaea) or four (Eukaryotes) core proteins that have diverse functions, including site-specific methylation of rRNA and processing rRNA.","definition_xrefs":["PMID:30254138","PMID:28505386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA-containing ribonucleoprotein complex","termid":"GO:0005732"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00744":null,"SJAG_00943":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_03410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"box C/D RNP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SNORD ribonucleoprotein complex","type":"broad"},{"name":"SNORNP","type":"broad"}],"termid":"GO:0170049","terms_by_termid":{"GO:0031428":null}}


id: GO:0035574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of a methyl group from lysine at position 20 of the histone.","definition_xrefs":["GOC:sp","PMID:20622853"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 demethylation (obsolete GO:0035574)","termid":"GO:0035574"}


id: PBO:0060192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC12 antisense RNA 1","termid":"PBO:0060192"}


id: PBO:0039983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 5B","termid":"PBO:0039983"}


id: GO:0008942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH4+ + 3 NAD(P)+ + 2 H2O = nitrite + 3 NAD(P)H + 5 H+.","definition_xrefs":["EC:1.7.1.4","PMID:31961593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"},{"relation_name":"is_a","term_name":"nitrite reductase activity","termid":"GO:0098809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitrite reductase [NAD(P)H] activity","secondary_identifiers":["KEGG_REACTION:R00789","KEGG_REACTION:R00787","MetaCyc:RXN0-6377","RHEA:24632"],"synonyms":[{"name":"NAD(P)H2:nitrite oxidoreductase activity","type":"related"},{"name":"NAD(P)H:nitrite oxidoreductase activity","type":"related"},{"name":"NADH-nitrite oxidoreductase activity","type":"related"},{"name":"NADPH-nitrite reductase activity","type":"related"},{"name":"ammonium-hydroxide:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"assimilatory nitrite reductase activity","type":"related"},{"name":"nitrite reductase (reduced nicotinamide adenine dinucleotide (phosphate)) activity","type":"related"},{"name":"nitrite reductase [NAD(P)H2]","type":"related"}],"termid":"GO:0008942"}


id: GO:0061304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a blood vessel of the retina over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel morphogenesis","termid":"GO:0048514"},{"relation_name":"is_a","term_name":"retina vasculature morphogenesis in camera-type eye","termid":"GO:0061299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal blood vessel morphogenesis","termid":"GO:0061304"}


id: PBO:0043534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 2","termid":"PBO:0043534"}


id: PBO:0065615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A2 pseudogene 1","termid":"PBO:0065615"}


id: FYPO:0007045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is decreased during a cellular response to zinc ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased alkaline phosphatase activity","termid":"FYPO:0007042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased alkaline phosphatase activity during cellular response to zinc ion starvation","synonyms":[{"name":"decreased alkaline phosphatase activity during cellular response to zinc ion depletion","type":"exact"},{"name":"decreased alkaline phosphatase activity during cellular response to zinc ion deprivation","type":"exact"},{"name":"decreased alkaline phosphatase activity during cellular response to zinc ion limitation","type":"exact"},{"name":"decreased alkaline phosphatase activity during cellular response to zinc starvation","type":"exact"},{"name":"reduced alkaline phosphatase activity during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0007045"}


id: PBO:0082743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; found in close proximity to nucleosomal DNA; displaced from the surface of nucleosomal DNA after chromatin remodeling; acetylated (K25) by Gcn5p, altering replication stress tolerance; contains tandem bromodomains that recognize histone H3 acetylated on K14 (H3K14ac) by Gcn5p","termid":"PBO:0082743"}


id: GO:0045551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cinnamyl alcohol + NADP+ = cinnamaldehyde + NADPH + H+. Also acts on coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.","definition_xrefs":["EC:1.1.1.195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cinnamyl-alcohol dehydrogenase activity","secondary_identifiers":["MetaCyc:CINNAMYL-ALCOHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"CAD activity","type":"broad"},{"name":"cinnamyl alcohol dehydrogenase activity","type":"related"},{"name":"cinnamyl-alcohol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0045551"}


id: GO:0045854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bicoid mRNA localization","termid":"GO:0008359"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of intracellular mRNA localization","termid":"GO:1904582"},{"relation_name":"positively_regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bicoid mRNA localization","synonyms":[{"name":"activation of bicoid mRNA localization","type":"narrow"},{"name":"positive regulation of bicoid mRNA localisation","type":"exact"},{"name":"stimulation of bicoid mRNA localization","type":"narrow"},{"name":"up regulation of bicoid mRNA localization","type":"exact"},{"name":"up-regulation of bicoid mRNA localization","type":"exact"},{"name":"upregulation of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045854"}


id: FYPO:0001964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aculeacin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to aculeacin A","synonyms":[{"name":"resistance to aculeacin A during mitotic cell cycle","type":"related"},{"name":"resistance to aculeacin A during vegetative growth","type":"exact"},{"name":"resistant to aculeacin A","type":"exact"}],"termid":"FYPO:0001964"}


id: PATO:0001094
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001094 absolute flux value (obsolete PATO:0001094)","termid":"PATO:0001094"}


id: PBO:0043204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase, mitochondrial 1B","termid":"PBO:0043204"}


id: PBO:0028518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_mitotic_spindle","termid":"PBO:0028518"}


id: GO:0047922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dihydroxybenzoate + O2 = 3-maleylpyruvate + H+.","definition_xrefs":["EC:1.13.11.4","RHEA:18237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gentisate 1,2-dioxygenase activity","secondary_identifiers":["MetaCyc:GENTISATE-12-DIOXYGENASE-RXN","KEGG_REACTION:R02656"],"synonyms":[{"name":"2,5-dihydroxybenzoate dioxygenase activity","type":"related"},{"name":"gentisate dioxygenase activity","type":"related"},{"name":"gentisate oxygenase activity","type":"related"},{"name":"gentisate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"gentisic acid oxidase activity","type":"related"}],"termid":"GO:0047922"}


id: PBO:0077685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 14","termid":"PBO:0077685"}


id: CHEBI:18019
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An L-alpha-amino acid; the L-isomer of lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine","termid":"CHEBI:18019"}


id: GO:0004970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transmembrane transfer of an ion by a channel that opens when glutamate has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate receptor activity","termid":"GO:0008066"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"glutamate-gated receptor activity","synonyms":[{"name":"ionotropic glutamate receptor activity","type":"exact"}],"termid":"GO:0004970"}


id: GO:0032955
data:
  {"annotated_genes":["SJAG_00229","SJAG_02514","SJAG_03581","SJAG_04666","SJAG_04776","SJAG_00082","SJAG_03704","SJAG_03631","SJAG_00526","SJAG_00514","SJAG_04597","SJAG_02645","SJAG_04455","SJAG_05290","SJAG_01188","SJAG_03936","SJAG_03353","SJAG_03048","SJAG_03681","SJAG_03342","SJAG_06270","SJAG_01464","SJAG_03592","SJAG_01386","SJAG_01114","SJAG_04468","SJAG_02169","SJAG_03508","SJAG_01805","SJAG_04509","SJAG_04943","SJAG_01790","SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77051,83931,85902,88446,90624],"is_not":false,"summary":null,"term":"GO:0032955"},{"annotations":[95748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010974"},{"annotations":[98467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[106307,89493,101150,95670,87753,91694,112069,88870,95750,86757,103668,88956,103220,97359,103359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[103169,109517,101293,102499,111633,89843,85273,85900,114072,88441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[90456,88442,83574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[89847,86034,106661,83575,98481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[114074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of division septum formation. Division septum formation is the assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["PMID:19959363","PMID:22786806","GOC:mtg_cell_cycle","PMID:21246752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell septum assembly","termid":"GO:1901891"},{"relation_name":"regulates","term_name":"division septum assembly","termid":"GO:0000917"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_02645":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03581":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_05290":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of division septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902468","GO:1901138"],"synonyms":[{"name":"regulation of division septum formation","type":"exact"}],"termid":"GO:0032955","terms_by_termid":{"GO:0010974":null,"GO:0031030":null,"GO:0031031":null,"GO:0032955":null,"GO:0140279":null,"GO:0140281":null,"GO:1905757":null,"GO:1905758":null}}


id: GO:0140843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + RNA polymerase II large subunit CTD heptapeptide repeat (YSPTSPS) = UDP + RNA polymerase II large subunit CTD heptapeptide repeat 3-O-(N-acetyl-D-glucosaminyl)-L-serine (position 7).","definition_xrefs":["PMID:22605332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II C-terminal domain O-GlcNAc transferase activity","termid":"GO:0140841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"RNA polymerase II C-terminal domain S7 O-GlcNAc transferase activity","secondary_identifiers":["EC:2.4.1.255"],"termid":"GO:0140843"}


id: MOD:01309
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - ","definition_xrefs":["Unimod:332#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphate labeled with biotin-HPDP","termid":"MOD:00639"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphate labeled with biotin-HPDP - site Y","synonyms":[{"name":"Thiophos-S-S-biotin","type":"related"},{"name":"thiophosphate labeled with biotin-HPDP","type":"related"}],"termid":"MOD:01309"}


id: FYPO:0007075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 14 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone ubiquitination during vegetative growth","termid":"FYPO:0002921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K14 ubiquitination during vegetative growth","synonyms":[{"name":"decreased histone H3-K14 ubiquitination during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K14 ubiquitination during vegetative growth","type":"exact"},{"name":"reduced histone H3-K14 ubiquitination during vegetative growth","type":"exact"}],"termid":"FYPO:0007075"}


id: PBO:0044238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 7","termid":"PBO:0044238"}


id: GO:0072172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric tubule from unspecified parts. A mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule formation","termid":"GO:0072079"},{"relation_name":"part_of","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric tubule formation","termid":"GO:0072172"}


id: PR:Q9USQ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sim3 gene.","definition_xrefs":["UniProtKB:Q9USQ4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NASP-related protein sim3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.15c","synonyms":[{"name":"CENP-A escort protein sim3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sim3","type":"exact"},{"name":"silencing in the middle of the centromere protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USQ4"}


id: PBO:0046483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 6 like 2","termid":"PBO:0046483"}


id: PBO:0062590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 5","termid":"PBO:0062590"}


id: GO:1990807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an acetyl group to a nitrogen atom on the amino acid of a protein.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete protein N-acetyltransferase activity (obsolete GO:1990807)","termid":"GO:1990807"}


id: PBO:0083672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum zinc transporter; part of a heterodimeric transporter with Msc2p that transfers zinc from the cytosol to the ER lumen; member of the cation diffusion facilitator family of efflux pumps; zinc-regulated directly through Zap1p; transcription induced under conditions of zinc deficiency","termid":"PBO:0083672"}


id: PBO:0004213
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated by mRNA stability","termid":"PBO:0004213"}


id: GO:1905623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leaf development.","definition_xrefs":["GOC:TermGenie","PMID:11606552","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of leaf development","termid":"GO:2000024"},{"relation_name":"positively_regulates","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leaf development","synonyms":[{"name":"activation of leaf development","type":"narrow"},{"name":"up regulation of leaf development","type":"exact"},{"name":"up-regulation of leaf development","type":"exact"},{"name":"upregulation of leaf development","type":"exact"}],"termid":"GO:1905623"}


id: PBO:0061501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of reactive oxygen species","termid":"PBO:0061501"}


id: PBO:0049483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.7 linker histone","termid":"PBO:0049483"}


id: GO:0060416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth hormone stimulus. Growth hormone is a peptide hormone that binds to the growth hormone receptor and stimulates growth.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to growth hormone","synonyms":[{"name":"response to growth hormone stimulus","type":"exact"}],"termid":"GO:0060416"}


id: PR:P22068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit beta, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit beta, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.12c","secondary_identifiers":["UniProtKB:P22068"],"synonyms":[{"name":"Spom972h-ATP5B","type":"exact"}],"termid":"PR:P22068"}


id: GO:0033273
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient","termid":"GO:0007584"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033273","terms_by_termid":{"GO:0036245":null}}


id: PBO:0066515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of cell cycle","termid":"PBO:0066515"}


id: GO:1902683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor localization to synapse.","definition_xrefs":["GOC:kmv","PMID:22252129","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor localization to synapse","synonyms":[{"name":"regulation of receptor localisation to synapse","type":"exact"}],"termid":"GO:1902683"}


id: SO:0001621
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant in a transcript that is the target of nonsense-mediated mRNA decay.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD_transcript_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"NMD transcript variant","type":"exact"},{"name":"NMD_transcript","type":"exact"},{"name":"Nonsense mediated decay transcript variant","type":"exact"},{"name":"VEP:NMD_transcript_variant","type":"exact"}],"termid":"SO:0001621"}


id: FYPO:0006681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PMID:19111658","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006681"}


id: PBO:0091017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase Pud1","termid":"PBO:0091017"}


id: PBO:0112849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 9-2","termid":"PBO:0112849"}


id: PBO:0048109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-fucosidase 1 pseudogene 1","termid":"PBO:0048109"}


id: GO:0032160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Arrays of septin filaments, or bars, found in a series of filamentous structures. Such structures have been observed in the prospore membrane during spore formation in S. cerevisiae and in the chlamydospore membrane during chlamydospore formation in C. albicans.","definition_xrefs":["GOC:krc","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton","termid":"GO:0032156"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin filament array","synonyms":[{"name":"septin bar","type":"related"}],"termid":"GO:0032160"}


id: PBO:0064174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group X","termid":"PBO:0064174"}


id: PBO:0030808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_cortex","termid":"PBO:0030808"}


id: PBO:0064783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1D","termid":"PBO:0064783"}


id: GO:0140672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and possibly H4. Shares the histone acetylation (HAT) module of GCN5/PCAF-ADA2-ADA3-SGF29 (or orthologs) with the related SAGA complex (GO:0000124). Contains HAT subunits GCN5 or PCAF in a mutually exclusive manner. In addition to the HAT module contains DR1/NC2B, KAT14, MBIP, WDR5, YEATS2 and ZZZ3 or orthologs. Also regulates the activity of non-histone targets and orchestrates mitotic progression by regulating Cyclin A degradation through acetylation.","definition_xrefs":["PMID:20562830","PMID:28966424","PMID:19936620","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"ATAC complex","synonyms":[{"name":"ADA2A-containing complex","type":"exact"},{"name":"Ada Two-A containing complex","type":"exact"},{"name":"Ada two A containing complex","type":"exact"},{"name":"Ada-Two-A-containing complex","type":"exact"},{"name":"G-ATAC complex","type":"exact"},{"name":"KAT2A-containing ATAC complex","type":"exact"},{"name":"KAT2B-containing ATAC complex","type":"exact"}],"termid":"GO:0140672"}


id: PBO:0034660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_from_kinetochore_to_spindle_during_meiosis_I","termid":"PBO:0034660"}


id: PBO:0075148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 4","termid":"PBO:0075148"}


id: GO:1904966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vitamin E biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20823244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of vitamin metabolic process","termid":"GO:0046136"},{"relation_name":"is_a","term_name":"regulation of vitamin E biosynthetic process","termid":"GO:1904965"},{"relation_name":"positively_regulates","term_name":"vitamin E biosynthetic process","termid":"GO:0010189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of vitamin E biosynthetic process","synonyms":[{"name":"activation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"activation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"activation of tocopherol biosynthesis","type":"narrow"},{"name":"activation of tocopherol biosynthetic process","type":"narrow"},{"name":"activation of vitamin E anabolism","type":"narrow"},{"name":"activation of vitamin E biosynthesis","type":"narrow"},{"name":"activation of vitamin E biosynthetic process","type":"narrow"},{"name":"activation of vitamin E formation","type":"narrow"},{"name":"activation of vitamin E synthesis","type":"narrow"},{"name":"positive regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"positive regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"positive regulation of tocopherol biosynthesis","type":"exact"},{"name":"positive regulation of tocopherol biosynthetic process","type":"exact"},{"name":"positive regulation of vitamin E anabolism","type":"exact"},{"name":"positive regulation of vitamin E biosynthesis","type":"exact"},{"name":"positive regulation of vitamin E formation","type":"exact"},{"name":"positive regulation of vitamin E synthesis","type":"exact"},{"name":"up regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"up regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"up regulation of tocopherol biosynthesis","type":"exact"},{"name":"up regulation of tocopherol biosynthetic process","type":"exact"},{"name":"up regulation of vitamin E anabolism","type":"exact"},{"name":"up regulation of vitamin E biosynthesis","type":"exact"},{"name":"up regulation of vitamin E biosynthetic process","type":"exact"},{"name":"up regulation of vitamin E formation","type":"exact"},{"name":"up regulation of vitamin E synthesis","type":"exact"},{"name":"up-regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"up-regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"up-regulation of tocopherol biosynthesis","type":"exact"},{"name":"up-regulation of tocopherol biosynthetic process","type":"exact"},{"name":"up-regulation of vitamin E anabolism","type":"exact"},{"name":"up-regulation of vitamin E biosynthesis","type":"exact"},{"name":"up-regulation of vitamin E biosynthetic process","type":"exact"},{"name":"up-regulation of vitamin E formation","type":"exact"},{"name":"up-regulation of vitamin E synthesis","type":"exact"},{"name":"upregulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"upregulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"upregulation of tocopherol biosynthesis","type":"exact"},{"name":"upregulation of tocopherol biosynthetic process","type":"exact"},{"name":"upregulation of vitamin E anabolism","type":"exact"},{"name":"upregulation of vitamin E biosynthesis","type":"exact"},{"name":"upregulation of vitamin E biosynthetic process","type":"exact"},{"name":"upregulation of vitamin E formation","type":"exact"},{"name":"upregulation of vitamin E synthesis","type":"exact"}],"termid":"GO:1904966"}


id: GO:0002914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of central B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"regulation of central B cell tolerance induction","termid":"GO:0002895"},{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"regulates","term_name":"central B cell anergy","termid":"GO:0002341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of central B cell anergy","termid":"GO:0002914"}


id: PBO:0043504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 3B","termid":"PBO:0043504"}


id: PBO:0087726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAS complex (Sas2p, Sas4p, Sas5p); acetylates free histones and nucleosomes and regulates transcriptional silencing; stimulates Sas2p HAT activity","termid":"PBO:0087726"}


id: PBO:0084380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity copper transporter of the vacuolar membrane; mutation confers resistance to toxic copper concentrations, while overexpression confers resistance to copper starvation; regulated by nonsense-mediated mRNA decay pathway","termid":"PBO:0084380"}


id: PBO:0110494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 10","termid":"PBO:0110494"}


id: PBO:0002996
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene reporter system","termid":"PBO:0002996"}


id: GO:0016667
data:
  {"annotated_genes":["SJAG_04632","SJAG_01038","SJAG_01417","SJAG_02016","SJAG_00365","SJAG_00489","SJAG_01647","SJAG_04046","SJAG_02827","SJAG_01162","SJAG_04060","SJAG_02495","SJAG_01693","SJAG_00614","SJAG_03992","SJAG_04125","SJAG_03414","SJAG_00822","SJAG_01199","SJAG_02599","SJAG_04953","SJAG_03653","SJAG_04399","SJAG_05027","SJAG_00419","SJAG_02489","SJAG_00196","SJAG_04539","SJAG_00288","SJAG_03290","SJAG_01292"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004148"},{"annotations":[114575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015036"},{"annotations":[93204,99293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"},{"annotations":[85436,97696,94023,110899,103544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015038"},{"annotations":[101340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004362"},{"annotations":[91620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036456"},{"annotations":[91097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016668"},{"annotations":[102718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033743"},{"annotations":[91621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008113"},{"annotations":[84807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004604"},{"annotations":[102912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047134"},{"annotations":[84651,98968,85438,110939,113551,86920,88336,94568,107286,97697,106969,96087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015035"},{"annotations":[104565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070224"},{"annotations":[97892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032542"},{"annotations":[83807,113657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004783"},{"annotations":[94569,110940,106970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016972"},{"annotations":[106229,78056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00288":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00822":null,"SJAG_01038":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01292":null,"SJAG_01417":null,"SJAG_01647":null,"SJAG_01693":null,"SJAG_02016":null,"SJAG_02489":null,"SJAG_02495":null,"SJAG_02599":null,"SJAG_02827":null,"SJAG_03290":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03992":null,"SJAG_04046":null,"SJAG_04060":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04539":null,"SJAG_04632":null,"SJAG_04953":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2213240","EC:1.8.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulfur group of donors, other acceptors","type":"narrow"},{"name":"oxidoreductase activity, acting on sulphur group of donors","type":"exact"}],"termid":"GO:0016667","terms_by_termid":{"GO:0004148":null,"GO:0004362":null,"GO:0004604":null,"GO:0004783":null,"GO:0004791":null,"GO:0008113":null,"GO:0015035":null,"GO:0015036":null,"GO:0015038":null,"GO:0016668":null,"GO:0016971":null,"GO:0016972":null,"GO:0032542":null,"GO:0033743":null,"GO:0036456":null,"GO:0047134":null,"GO:0070224":null}}


id: FYECO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, glutamine nitrogen source","synonyms":[{"name":"EMMG","type":"related"},{"name":"glucose minimal medium, glutamine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, glutamine nitrogen source","type":"related"}],"termid":"FYECO:0000403"}


id: PBO:0067424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 543, pseudogene","termid":"PBO:0067424"}


id: PBO:0064856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14D","termid":"PBO:0064856"}


id: PBO:0003743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human c19orf29 ortholog","termid":"PBO:0003743"}


id: GO:0008457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide = UDP + N-acetyl-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity (obsolete GO:0008457)","synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide beta-1,3-acetylglucosaminyltransferase activity","type":"exact"},{"name":"poly-N-acetyllactosamine extension enzyme activity","type":"broad"}],"termid":"GO:0008457"}


id: PBO:0055170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2594","termid":"PBO:0055170"}


id: PBO:0051701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase A","termid":"PBO:0051701"}


id: GO:0031548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling via the brain-derived neurotrophic factor receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of brain-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"regulation of BDNF receptor signaling pathway","type":"exact"},{"name":"regulation of BDNF receptor signalling pathway","type":"exact"},{"name":"regulation of brain-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0031548"}


id: GO:0071317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to isoquinoline alkaloid","termid":"GO:0014072"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to isoquinoline alkaloid","termid":"GO:0071317"}


id: GO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the adherens junction.","definition_xrefs":["GOC:bc","GOC:BHF","GOC:aruk","GOC:mah","PMID:26412237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to adherens junction","secondary_identifiers":["GO:1904696"],"synonyms":[{"name":"protein localisation in adherens junction","type":"exact"},{"name":"protein localisation in cell-cell adherens junction","type":"exact"},{"name":"protein localisation to adherens junction","type":"exact"},{"name":"protein localisation to cell-cell adherens junction","type":"exact"},{"name":"protein localization in adherens junction","type":"exact"},{"name":"protein localization in cell-cell adherens junction","type":"exact"},{"name":"protein localization to cell-cell adherens junction","type":"exact"}],"termid":"GO:0071896"}


id: GO:0045652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of megakaryocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell differentiation","termid":"GO:0045637"},{"relation_name":"regulates","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of megakaryocyte differentiation","termid":"GO:0045652"}


id: SO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A snoRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_snoRNA_primary_transcript","synonyms":[{"name":"miR encoding snoRNA primary transcript","type":"exact"}],"termid":"SO:0002034"}


id: PBO:0047404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 42","termid":"PBO:0047404"}


id: PATO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in one dimension.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-D extent","synonyms":[{"name":"1-D size","type":"exact"}],"termid":"PATO:0001708"}


id: PBO:0058046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4267","termid":"PBO:0058046"}


id: PBO:0049519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.L variant histone 1M, pseudogene","termid":"PBO:0049519"}


id: PBO:0045343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"docking protein 3","termid":"PBO:0045343"}


id: MOD:00740
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a manganese atom or a cluster containing manganese for hydrogen atoms, or that coordinates a manganese ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese containing modified residue","synonyms":[{"name":"MnRes","type":"exact"}],"termid":"MOD:00740"}


id: SO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a small nucleolar RNA of the box H/ACA family.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_snoRNA_primary_transcript","synonyms":[{"name":"H ACA box snoRNA primary transcript","type":"exact"}],"termid":"SO:0000596"}


id: GO:0050761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving depsipeptides, a linear or cyclic compound composed of both amino acids and hydroxy acids in peptide and ester bonds respectively.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"depsipeptide metabolic process","synonyms":[{"name":"depsipeptide metabolism","type":"exact"}],"termid":"GO:0050761"}


id: PBO:0028461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_septin_ring","termid":"PBO:0028461"}


id: GO:1900384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of flavonol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of flavonoid biosynthetic process","termid":"GO:0009962"},{"relation_name":"regulates","term_name":"flavonol biosynthetic process","termid":"GO:0051555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of flavonol biosynthetic process","termid":"GO:1900384"}


id: PBO:0087592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; subunit of the telomere cap complex DNA-binding protein specific to single-stranded yeast telomeric DNA repeats, required for telomere length regulation and telomere position effect; involved in the stability or biogenesis of PIKKs such as TORC1","termid":"PBO:0087592"}


id: PBO:0078659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 12-1","termid":"PBO:0078659"}


id: PBO:0059772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 46","termid":"PBO:0059772"}


id: PR:000050542
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein gtr1 (Schizosaccharomyces pombe) that is non-covalently bound to GDP.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:27227887","PMID:33534698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein gtr1 (Schizosaccharomyces pombe)","termid":"PR:000050541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gtr1/GDP+","pombase_gene_id":"SPBC337.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein gtr1, GDP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gtr1/GDP+","type":"exact"},{"name":"gtr1/GDP+","type":"exact"},{"name":"Gtr1/GDP+","type":"exact"}],"termid":"PR:000050542"}


id: PBO:0047090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member B","termid":"PBO:0047090"}


id: PBO:0064359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-melanin concentrating hormone like 2 (pseudogene)","termid":"PBO:0064359"}


id: GO:0070933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of one or more acetyl groups.","definition_xrefs":["GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4 deacetylation (obsolete GO:0070933)","termid":"GO:0070933"}


id: GO:0032094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat.","definition_xrefs":["ISBN:0721601464","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to food","termid":"GO:0032094"}


id: PBO:0054840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2254","termid":"PBO:0054840"}


id: PBO:0083645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT2 has a paralog, EFT1, that arose from the whole genome duplication","termid":"PBO:0083645"}


id: PATO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape form resembling the shape of a cup.","direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cup-shaped","synonyms":[{"name":"cup-like","type":"exact"}],"termid":"PATO:0002227"}


id: PBO:0062220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AP member 1 pseudogene","termid":"PBO:0062220"}


id: PATO:0002538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality that obtains by virtue of the bearer being concave on one side and convex on the other.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/concavo-convex"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concavo-convex","synonyms":[{"name":"concavoconvex","type":"exact"}],"termid":"PATO:0002538"}


id: GO:0016900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces a disulfide molecule.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-OH group of donors, disulfide as acceptor (obsolete GO:0016900)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-OH group of donors, disulphide as acceptor","type":"exact"}],"termid":"GO:0016900"}


id: PR:G2TRP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30B4.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30B4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.09","synonyms":[{"name":"Spom972h-SPBC30B4.09","type":"exact"}],"termid":"PR:G2TRP1"}


id: GO:0032747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-23 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-23 production","termid":"GO:0032667"},{"relation_name":"positively_regulates","term_name":"interleukin-23 production","termid":"GO:0032627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-23 production","secondary_identifiers":["GO:0045398"],"synonyms":[{"name":"activation of interleukin-23 production","type":"narrow"},{"name":"positive regulation of IL-23 production","type":"exact"},{"name":"positive regulation of interleukin-23 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-23 production","type":"narrow"},{"name":"up regulation of interleukin-23 production","type":"exact"},{"name":"up-regulation of interleukin-23 production","type":"exact"},{"name":"upregulation of interleukin-23 production","type":"exact"}],"termid":"GO:0032747"}


id: PBO:0090035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp3","termid":"PBO:0090035"}


id: FYPO:0006392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to meiotic spindle pole body","termid":"FYPO:0003542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"abolished protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"abolished protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"abolished protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to spindle pole body during meiosis I","type":"exact"},{"name":"protein localization to meiotic spindle pole body abolished during meiosis I","type":"exact"}],"termid":"FYPO:0006392"}


id: PBO:0071677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 9","termid":"PBO:0071677"}


id: GO:0061127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-1. DIF-1 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by DIF-1","termid":"GO:0061120"},{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP by DIF-1","termid":"GO:0061127"}


id: GO:0100040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates invasive growth in response to glucose limitation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invasive growth in response to glucose limitation by transcription from RNA polymerase II promoter (obsolete GO:0100040)","termid":"GO:0100040"}


id: PBO:0075729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 9","termid":"PBO:0075729"}


id: SO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operation that can be applied to a sequence, that results in a change.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000041 sequence_operation (obsolete SO:0000041)","synonyms":[{"name":"sequence operation","type":"exact"}],"termid":"SO:0000041"}


id: GO:0110161
data:
  {"annotated_genes":["SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107580],"is_not":false,"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic prophase (spindle phase one).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic spindle organization","termid":"GO:0110028"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle formation (spindle phase one)","termid":"GO:0110159"},{"relation_name":"is_a","term_name":"positive regulation of spindle assembly","termid":"GO:1905832"},{"relation_name":"positively_regulates","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0000226","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"positive regulation of mitotic spindle formation (spindle phase one)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110161","terms_by_termid":{"GO:0110161":null}}


id: PBO:0047970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FREM2 antisense RNA 1","termid":"PBO:0047970"}


id: PBO:0109651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A antisense RNA 1","termid":"PBO:0109651"}


id: PBO:0077338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 74B","termid":"PBO:0077338"}


id: PBO:0044804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 104A","termid":"PBO:0044804"}


id: PBO:0060397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2 like 1","termid":"PBO:0060397"}


id: PBO:0054535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1935","termid":"PBO:0054535"}


id: PBO:0064031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 65","termid":"PBO:0064031"}


id: GO:0103084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(4'-methylthio)butylmalate = H+ + 2-oxo-7-methylthioheptanoate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiobutylmalate dehydrogenase activity (obsolete GO:0103084)","termid":"GO:0103084"}


id: PBO:0088857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type transcription factor (Pc-like)","termid":"PBO:0088857"}


id: PBO:0065009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 13","termid":"PBO:0065009"}


id: GO:2000585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet-derived growth factor receptor-alpha signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010641"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:2000583"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"positive regulation of PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"positive regulation of PDGFR-alpha signaling pathway","type":"related"},{"name":"positive regulation of alphaPDGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:2000585"}


id: PBO:0017063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug46","termid":"PBO:0017063"}


id: GO:0033115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer membrane of any thylakoid within a cyanelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid membrane","termid":"GO:0055035"},{"relation_name":"part_of","term_name":"cyanelle thylakoid","termid":"GO:0009843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle thylakoid membrane","termid":"GO:0033115"}


id: PBO:0065712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvalbumin like EF-hand containing","termid":"PBO:0065712"}


id: PBO:0060086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 33","termid":"PBO:0060086"}


id: GO:0042326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"negatively_regulates","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphorylation","synonyms":[{"name":"down regulation of phosphorylation","type":"exact"},{"name":"down-regulation of phosphorylation","type":"exact"},{"name":"downregulation of phosphorylation","type":"exact"},{"name":"inhibition of phosphorylation","type":"narrow"}],"termid":"GO:0042326"}


id: PBO:0057229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 384","termid":"PBO:0057229"}


id: PBO:0012890
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quant_gene_ex_avg_copies_per_cell","termid":"PBO:0012890"}


id: PBO:0055928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A16, pseudogene","termid":"PBO:0055928"}


id: GO:0000072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A microtubule-based process that occurs only during M phase of the cell cycle.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete M phase specific microtubule process (obsolete GO:0000072)","synonyms":[{"name":"M phase specific microtubule process","type":"exact"},{"name":"M-phase specific microtubule process","type":"exact"}],"termid":"GO:0000072"}


id: GO:0047166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkenylglycerophosphoethanolamine + acyl-CoA = 1-alkenyl-2-acyl-glycerophosphoethanolamine + CoA.","definition_xrefs":["EC:2.3.1.121","MetaCyc:2.3.1.121-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"1-alkenylglycerophosphoethanolamine O-acyltransferase activity","secondary_identifiers":["RHEA:16245"],"synonyms":[{"name":"acyl-CoA:1-alkenylglycerophosphoethanolamine O-acyltransferase activity","type":"related"}],"termid":"GO:0047166"}


id: GO:0005093
data:
  {"annotated_genes":["SJAG_02422"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89536],"is_not":false,"summary":null,"term":"GO:0005093"}]},"cv_name":"molecular_function","definition":"Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-dissociation inhibitor activity","termid":"GO:0005092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"Rab GDP-dissociation inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005093","terms_by_termid":{"GO:0005093":null}}


id: PBO:0054727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2136","termid":"PBO:0054727"}


id: GO:0019732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against a fungus mediated through a body fluid. An example of this process is the antifungal humoral response in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial humoral response","termid":"GO:0019730"},{"relation_name":"is_a","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antifungal humoral response","secondary_identifiers":["GO:0006966","GO:0019734"],"termid":"GO:0019732"}


id: GO:0048533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized floral cell acquires the specialized features of a sporocyte. Sporocytes are the haploid spores of angiosperms. Once formed, they undergo meiotic divisions to form microspores and megaspores.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocyte differentiation","synonyms":[{"name":"sporocyte development","type":"narrow"},{"name":"sporocyte morphogenesis","type":"related"}],"termid":"GO:0048533"}


id: GO:0052846
data:
  {"annotated_genes":["SJAG_01154","SJAG_00244","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84756,101311,111218],"is_not":false,"summary":null,"term":"GO:0052846"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-bisdiphospho-1D-myo-inositol 2,3,4,6-tetrakisphosphate + H2O = 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate + phosphate + H+.","definition_xrefs":["PMID:26422458","PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisdiphosphate tetrakisphosphate diphosphatase activity","termid":"GO:0052841"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-10965","GO:0101012"],"synonyms":[{"name":"inositol 1,5-bisdiphosphate 2,3,4,6-tetrakisphosphate 1-diphosphatase activity","type":"exact"},{"name":"inositol 1,5-bispyrophosphate 2,3,4,6-tetrakisphosphate 1-pyrophosphatase activity","type":"exact"}],"termid":"GO:0052846","terms_by_termid":{"GO:0052846":null}}


id: FYPO:0007198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between centromeres of sister chromatids is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0071962","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic sister chromatid cohesion","termid":"FYPO:0002390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic centromeric sister chromatid cohesion","synonyms":[{"name":"normal centromeric sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"normal mitotic centromeric sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal mitotic chromosome cohesion at centromere","type":"exact"},{"name":"normal mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"normal sister chromatid cohesion at centromere during mitosis","type":"exact"}],"termid":"FYPO:0007198"}


id: PBO:0044158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD small phosphatase like","termid":"PBO:0044158"}


id: PBO:0003834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific cyclin Rem1","termid":"PBO:0003834"}


id: GO:0018838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-mandelate = (R)-mandelate.","definition_xrefs":["EC:5.1.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"mandelate racemase activity","secondary_identifiers":["UM-BBD_reactionID:r0091","MetaCyc:MANDELATE-RACEMASE-RXN","RHEA:13945"],"termid":"GO:0018838"}


id: FYPO:0007929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phloxine B. Cells stop growing (and may die) at a concentration of phloxine B that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to phloxine B","synonyms":[{"name":"sensitive to phloxine B during vegetative growth","type":"exact"}],"termid":"FYPO:0007929"}


id: PBO:0065079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA primase subunit 2","termid":"PBO:0065079"}


id: PBO:0059143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose phosphate isomerase","termid":"PBO:0059143"}


id: PBO:0070465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5","termid":"PBO:0070465"}


id: PBO:0088826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1","termid":"PBO:0088826"}


id: PBO:0047666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fukutin","termid":"PBO:0047666"}


id: GO:0006630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lipid binding (obsolete GO:0006630)","synonyms":[{"name":"lipid binding","type":"exact"}],"termid":"GO:0006630"}


id: PBO:0071725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 23","termid":"PBO:0071725"}


id: FYPO:0005057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break clipping does not occur. Meiotic DNA double-strand break clipping is the process by which SPO11/Rec12-oligonucleotide complexes are removed from 5' DNA double-strand breaks induced during meiosis.","definition_xrefs":["PomBase:mah","PMID:26130711","GO:1990898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abolished meiotic DNA double-strand break clipping","synonyms":[{"name":"meiotic DNA double-strand break clipping abolished","type":"exact"}],"termid":"FYPO:0005057"}


id: GO:0030518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a steroid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone receptor signaling pathway","termid":"GO:0043401"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nuclear receptor-mediated steroid hormone signaling pathway","synonyms":[{"name":"intracellular steroid hormone receptor signaling pathway","type":"exact"},{"name":"steroid hormone receptor signaling pathway","type":"broad"},{"name":"steroid hormone receptor signalling pathway","type":"broad"}],"termid":"GO:0030518"}


id: PBO:0108712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGEF, implicated in endosomal transport","termid":"PBO:0108712"}


id: PBO:0071574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 3","termid":"PBO:0071574"}


id: RO:0002235
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite-of relationship in which the host is a plant and the parasite that attaches to the host stem (PO:0009047)","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem_parasite_of","termid":"RO:0002235"}


id: PR:O14064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bir1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bir1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.02c","synonyms":[{"name":"Spom972h-bir1","type":"exact"},{"name":"chromosome segregation protein cut17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14064"}


id: PBO:0088366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit","termid":"PBO:0088366"}


id: PBO:0114390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonin WD repeat-containing, dysferlin-like autophagy-related protein Mug65","termid":"PBO:0114390"}


id: _global:translation_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is translation of Y if Y is translated by ribosome to create X.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation_of","termid":"_global:translation_of"}


id: PBO:0059944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 30","termid":"PBO:0059944"}


id: PBO:0067068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 96, pseudogene","termid":"PBO:0067068"}


id: PBO:0113374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative AMP hydrolase; secreted protein proposed to function as an adenosine monophosphatase in NAD+ degradation, via nucleoside salvage pathway that converts NAD+ to AMP and adenosine; overexpression results in adenosine accumulation and reduced levels of NAD+, deletion results in increased NAD+ and NADH; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; similar to human NT5E/CD73 gene involved in cancer progression","termid":"PBO:0113374"}


id: GO:0021649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the vestibulocochlear nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve morphogenesis","termid":"GO:0021648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve structural organization","synonyms":[{"name":"CN VII structural organization","type":"related"},{"name":"vestibulocochlear nerve structural organisation","type":"exact"}],"termid":"GO:0021649"}


id: PBO:0033759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_exit_from_meiosis","termid":"PBO:0033759"}


id: FYPO:0001254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two or more nuclei and more than one septum, and the septa are grouped together between two compartments, one or more of which may contain multiple nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell, septa grouped","termid":"FYPO:0002002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000032","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"multinucleate multiseptate vegetative cell, septa grouped","synonyms":[{"name":"multinucleate multiseptate cell, septa grouped during mitotic cell cycle","type":"related"},{"name":"multinucleate multiseptate cell, septa grouped during vegetative growth","type":"exact"}],"termid":"FYPO:0001254"}


id: GO:0090573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase IV promoter.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase IV transcription repressor complex","termid":"GO:0090573"}


id: FYPO:0000895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal with a cluster distal to one or both sides of the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"},{"relation_name":"is_a","term_name":"abnormal intracellular mitochondrion distribution","termid":"FYPO:0000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"mitochondrial aggregation","secondary_identifiers":["FYPO:0000896"],"synonyms":[{"name":"aggregated mitochondria","type":"exact"},{"name":"mitochondrial aggregation at cell end","type":"related"},{"name":"mitochondrial aggregation at cell tip","type":"related"},{"name":"mitochondrial aggregation during mitotic cell cycle","type":"related"},{"name":"mitochondrial aggregation during vegetative growth","type":"exact"}],"termid":"FYPO:0000895"}


id: PBO:0086839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein tyrosine phosphatase; required for cell cycle arrest in response to oxidative damage of DNA","termid":"PBO:0086839"}


id: PBO:0059501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded 7S DNA","termid":"PBO:0059501"}


id: PBO:0068913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 156, pseudogene","termid":"PBO:0068913"}


id: GO:0102141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphonato-5'-adenylyl sulfate + [chondroitin-sulfate]-beta-D-glucuronate = adenosine 3',5'-bismonophosphate + [chondroitin-sulfate]-2-O-sulfo-beta-D-glucuronate.","definition_xrefs":["GOC:pz","EC:2.8.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"[chondroitin sulfate]-D-glucuronyl 2-O-sulfotransferase activity","secondary_identifiers":["MetaCyc:RXN-11560"],"termid":"GO:0102141"}


id: PBO:0038272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_deletion_and_mutation","termid":"PBO:0038272"}


id: PBO:0029207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_spindle_elongation","termid":"PBO:0029207"}


id: GO:0021668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 6. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 6 morphogenesis","termid":"GO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 structural organization","synonyms":[{"name":"rhombomere 6 structural organisation","type":"exact"}],"termid":"GO:0021668"}


id: PBO:0061843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Opa interacting protein 5","termid":"PBO:0061843"}


id: GO:0032286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure and material content of mature central nervous system myelin is kept in a functional state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin maintenance","termid":"GO:0043217"},{"relation_name":"part_of","term_name":"central nervous system myelination","termid":"GO:0022010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"central nervous system myelin maintenance","synonyms":[{"name":"central nervous system myelin sheath maintenance","type":"exact"},{"name":"myelin maintenance in central nervous system","type":"exact"}],"termid":"GO:0032286"}


id: GO:2000522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immunological synapse formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of immunological synapse formation","termid":"GO:2000520"},{"relation_name":"positively_regulates","term_name":"immunological synapse formation","termid":"GO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immunological synapse formation","synonyms":[{"name":"positive regulation of formation of immunological synapse","type":"exact"}],"termid":"GO:2000522"}


id: PBO:0013744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family membrane transporter Mfs2 (predicted)","termid":"PBO:0013744"}


id: GO:0043905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ser-tRNA(Thr).","definition_xrefs":["GOC:jl","PMID:15240874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"L-seryl-tRNA(Thr) hydrolase activity","synonyms":[{"name":"Ser-tRNA(Thr) hydrolase activity","type":"exact"},{"name":"Ser-tRNAThr hydrolase activity","type":"exact"}],"termid":"GO:0043905"}


id: FYPO:0002386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at centromere outer repeat","termid":"FYPO:0006818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"deceased protein localization to heterochromatin at centromere otr","type":"exact"},{"name":"decreased protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"decreased protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"decreased protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin at centromeric outer repeat region","type":"exact"},{"name":"decreased protein localization to heterochromatin at pericentric region","type":"related"},{"name":"decreased protein localization to heterochromatin at pericentromeric region","type":"related"},{"name":"reduced protein localization to heterochromatin at centromere outer repeat","type":"exact"}],"termid":"FYPO:0002386"}


id: PBO:0061350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 8","termid":"PBO:0061350"}


id: GO:0071097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to paxillin and the FAK-related kinase Pyk2.","definition_xrefs":["PMID:11683411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-paxillin-Pyk2 complex","synonyms":[{"name":"ITGAV-ITGB3-PXN-PTK2b complex","type":"narrow"}],"termid":"GO:0071097"}


id: PBO:0065893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB39B, member RAS oncogene family","termid":"PBO:0065893"}


id: GO:0048136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a group of interconnected cells derived from a single male gonial founder cell.","definition_xrefs":["GOC:jid","PMID:10370240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line cyst formation","termid":"GO:0048134"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ-line cyst formation","synonyms":[{"name":"male germline cyst formation","type":"exact"}],"termid":"GO:0048136"}


id: MOD:01777
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a C-terminal glycine residue to S-(glycyl)-L-cysteine by forming a thioester bond with a free L-cysteine.","definition_xrefs":["ChEBI:22050","PubMed:18359941","PubMed:3306404","RESID:AA0206","PubMed:18771296","PubMed:18842002","PubMed:17726030","PubMed:18799456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(glycyl)-L-cysteine (Gly)","synonyms":[{"name":"(2R)-2-amino-3-[(aminoacetyl)sulfanyl]propanoic acid","type":"exact"},{"name":"1-(cystein-S-yl)-glycinate","type":"exact"},{"name":"MOD_RES CysO-cysteine adduct","type":"exact"},{"name":"S-(2-amino-1-oxoethyl)cysteine","type":"exact"},{"name":"S-(glycyl)-L-cysteine","type":"exact"},{"name":"glycine cysteine thioester","type":"exact"}],"termid":"MOD:01777"}


id: PBO:0061888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPCML intronic transcript 1","termid":"PBO:0061888"}


id: GO:0004874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an aryl hydrocarbon and transmitting the signal to initiate a change in cell activity. The aryl hydrocarbon receptor is a ligand-activated transcription factor which translocates to the nucleus to activate transcription upon ligand-binding.","definition_xrefs":["GOC:ai","PMID:7493958","PMID:1325649","Wikipedia:Aryl_hydrocarbon_receptor"],"gene_count":0,"genotype_count":0,"name":"obsolete aryl hydrocarbon receptor activity (obsolete GO:0004874)","termid":"GO:0004874"}


id: PBO:0000774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsd1/2 complex PHD finger containing protein Phf2","termid":"PBO:0000774"}


id: PBO:0052171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 2","termid":"PBO:0052171"}


id: GO:0044507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that activates or increases the frequency, rate or extent of the activity of a receptor in a second organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:8405712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function in another organism","termid":"GO:0044491"},{"relation_name":"is_a","term_name":"modulation of receptor activity in another organism","termid":"GO:0044504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor activity in another organism","synonyms":[{"name":"positive regulation of receptor activity in other organism","type":"exact"}],"termid":"GO:0044507"}


id: GO:0016241
data:
  {"annotated_genes":["SJAG_02433","SJAG_04496","SJAG_04435","SJAG_01716","SJAG_03851","SJAG_05289","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[104693,104783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[93690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[102374,94078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[85552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macroautophagy.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"regulates","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_02433":null,"SJAG_02723":null,"SJAG_03851":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006914"],"is_obsolete":false,"name":"regulation of macroautophagy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of starvation-induced autophagy","type":"exact"}],"termid":"GO:0016241","terms_by_termid":{"GO:0016239":null,"GO:0016242":null,"GO:0140501":null,"GO:1901098":null,"GO:2000786":null}}


id: FYPO:0004868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ionizing radiation during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to ionizing radiation during vegetative growth","termid":"FYPO:0000267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to ionizing radiation during mitotic G1 phase","synonyms":[{"name":"decreased growth during cellular response to ionizing radiation during mitotic G1 phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to ionizing radiation during mitotic G1 phase","type":"exact"},{"name":"hypersensitive to ionizing radiation during mitotic G1 phase","type":"exact"},{"name":"sensitive to IR during mitotic G1 phase","type":"exact"},{"name":"sensitive to gamma irradiation during mitotic G1 phase","type":"narrow"},{"name":"sensitive to gamma radiation during mitotic G1 phase","type":"narrow"},{"name":"sensitive to ionizing radiation during G1 phase of mitotic cell cycle","type":"exact"},{"name":"sensitive to ionizing radiation during mitotic G1 phase during mitotic cell cycle","type":"related"},{"name":"sensitive to ionizing radiation during mitotic G1 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004868"}


id: GO:0001727
data:
  {"annotated_genes":["SJAG_00114","SJAG_01571","SJAG_02429","SJAG_04883","SJAG_00638","SJAG_01863","SJAG_05330","SJAG_04537"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107273,89252,92764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004430"},{"annotations":[93665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016303"},{"annotations":[87867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052811"},{"annotations":[106124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000285"},{"annotations":[87868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016308"},{"annotations":[106050,93732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004143"},{"annotations":[106051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141035"},{"annotations":[93733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017050"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of a simple or complex lipid.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00638":null,"SJAG_01571":null,"SJAG_01863":null,"SJAG_02429":null,"SJAG_04537":null,"SJAG_04883":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"lipid kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9695949","Reactome:R-HSA-428273"],"termid":"GO:0001727","terms_by_termid":{"GO:0000285":null,"GO:0004143":null,"GO:0004430":null,"GO:0016303":null,"GO:0016308":null,"GO:0017050":null,"GO:0052811":null,"GO:0141035":null}}


id: PBO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan-tRNA ligase Wrs1 (predicted)","termid":"PBO:0000457"}


id: GO:0035663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like 2 protein, a pattern recognition receptor that binds microbial pattern motifs to initiate an innate immune response.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Toll-like receptor binding","termid":"GO:0035325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Toll-like receptor 2 binding","synonyms":[{"name":"TLR2 binding","type":"exact"}],"termid":"GO:0035663"}


id: PBO:0111834
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jmjN domain","termid":"PBO:0111834"}


id: PBO:0075196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 8","termid":"PBO:0075196"}


id: PBO:0000584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial leucine-tRNA ligase (predicted)","termid":"PBO:0000584"}


id: PBO:0042494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH13 antisense RNA 2","termid":"PBO:0042494"}


id: SO:1000115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000115 sequence_variant_causing_complex_3D_structural_change (obsolete SO:1000115)","synonyms":[{"name":"mutation causing complex 3D structural change","type":"related"},{"name":"sequence variant causing complex 3D structural change","type":"exact"}],"termid":"SO:1000115"}


id: GO:1901279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-ribose 5-phosphate.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"D-ribose 5-phosphate metabolic process","termid":"GO:1901278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-ribose 5-phosphate catabolic process","synonyms":[{"name":"D-ribose 5-phosphate breakdown","type":"exact"},{"name":"D-ribose 5-phosphate catabolism","type":"exact"},{"name":"D-ribose 5-phosphate degradation","type":"exact"}],"termid":"GO:1901279"}


id: PBO:0059633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule crosslinking factor 1","termid":"PBO:0059633"}


id: PBO:0051675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 5","termid":"PBO:0051675"}


id: PBO:0052425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KiSS-1 metastasis suppressor","termid":"PBO:0052425"}


id: PBO:0083442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified, essential ORF CCT6/YDR188W","termid":"PBO:0083442"}


id: PBO:0027783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation","termid":"PBO:0027783"}


id: GO:0043198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic shaft","secondary_identifiers":["NIF_Subcellular:sao2034472720"],"synonyms":[{"name":"trunk","type":"related"}],"termid":"GO:0043198"}


id: PBO:0059210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rRNA methyltransferase 2","termid":"PBO:0059210"}


id: PBO:0083095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage-dependent checkpoint protein; required for cell-cycle arrest in G1/S, intra-S, and G2/M, plays a role in postreplication repair (PRR) pathway; transmits checkpoint signal by activating Rad53p and Chk1p; protects double-strand breaks from premature resection; multiple cyclin dependent kinase consensus sites and the C-terminal BRCT domain contribute to DNA damage checkpoint activation; Rad9p Chk1 Activating Domain (CAD) is phosphorylated at multiple sites by Cdc28p/Clb2p","termid":"PBO:0083095"}


id: GO:0052721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of apurinic/apyrimidinic (AP) endodeoxyribonuclease activity, the hydrolysis of ester linkages immediately 5' to an AP (also called abasic) site within a deoxyribonucleic acid molecule by creating internal breaks, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.","definition_xrefs":["PMID:19401441"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of apurinic/apyrimidinic endodeoxyribonuclease activity (obsolete GO:0052721)","synonyms":[{"name":"regulation of AP endodeoxyribonuclease activity","type":"exact"},{"name":"regulation of abasic endodeoxyribonuclease activity","type":"exact"},{"name":"regulation of apurinic endodeoxyribonuclease activity","type":"narrow"},{"name":"regulation of apyrimidinic endodeoxyribonuclease activity","type":"narrow"}],"termid":"GO:0052721"}


id: FYPO:0008128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing low glucose. This term refers to situations where glucose is below 0.2%.","definition_xrefs":["PMID:37859837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0005447","FYPO:0002057","FYPO:0002058","FYPO:0001985"],"is_obsolete":false,"name":"decreased vegetative cell population growth on low glucose","termid":"FYPO:0008128"}


id: PBO:0038960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine kinase","termid":"PBO:0038960"}


id: FYPO:0007164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of microtubule sliding, i.e. movement of one microtubule along another microtubule, is decreased.","definition_xrefs":["GO:0051012","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased microtubule sliding","termid":"FYPO:0007164"}


id: PBO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen54 (predicted)","termid":"PBO:0005000"}


id: GO:0047586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'-acylphosphoadenosine + H2O = AMP + a carboxylate.","definition_xrefs":["EC:3.6.1.20","MetaCyc:5-ACYLPHOSPHOADENOSINE-HYDROLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"5'-acylphosphoadenosine hydrolase activity","secondary_identifiers":["RHEA:16837"],"synonyms":[{"name":"5'-acylphosphoadenosine acylhydrolase activity","type":"related"},{"name":"5-phosphoadenosine hydrolase activity","type":"related"}],"termid":"GO:0047586"}


id: PBO:0066049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1 GTPase activating protein 2","termid":"PBO:0066049"}


id: PBO:0089843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane alkaline phosphatase","termid":"PBO:0089843"}


id: PBO:0054447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1844","termid":"PBO:0054447"}


id: PBO:0056398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein RP/EB family member 3","termid":"PBO:0056398"}


id: PBO:0013839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"controlled curation, orthologous to S. cerevisiae YIL026C","termid":"PBO:0013839"}


id: GO:0102187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-carboxy,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NAD(1-) = 4alpha,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3-one + NADH(2-) + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-carboxy,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol dehydrogenase/C4-decarboxylase activity (obsolete GO:0102187)","termid":"GO:0102187"}


id: PBO:0062388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 8 pseudogene","termid":"PBO:0062388"}


id: GO:0052827
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990651"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol pentakisphosphate + H2O = myo-inositol tetrakisphosphate + phosphate.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol pentakisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052827","terms_by_termid":{"GO:1990651":null}}


id: FYPO:0005710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal, resulting in one or more rounds of rereplication of the entire genome, followed by cell cycle arrest.","definition_xrefs":["PMID:7774573","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal mitotic cell cycle arrest with replicated DNA","termid":"FYPO:0000444"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with replicated DNA","termid":"FYPO:0000444"},{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation resulting in complete re-replication, with mitotic cell cycle arrest","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with cell cycle arrest, during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest with replicated DNA","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest, during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest","type":"exact"}],"termid":"FYPO:0005710"}


id: SO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the 3' UTR of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_3UTR_variant","secondary_identifiers":["http://annovar.openbioinformatics.org/en/latest/user-guide/gene/"],"synonyms":[{"name":"ANNOVAR:ncRNA_UTR3","type":"exact"},{"name":"incomplete transcript 3UTR variant","type":"related"}],"termid":"SO:0002076"}


id: GO:0030430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasm of a host cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell cytoplasm","secondary_identifiers":["GO:0097679"],"synonyms":[{"name":"other organism cytoplasm","type":"related"}],"termid":"GO:0030430"}


id: PBO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps52 (predicted)","termid":"PBO:0004191"}


id: PR:O14076
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpp6 gene.","definition_xrefs":["UniProtKB:O14076","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein UNK4.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.11c","synonyms":[{"name":"Spom972h-mpp6","type":"exact"}],"termid":"PR:O14076"}


id: FYPO:0007545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic nuclear bridge for a longer time than normal.","definition_xrefs":["PomBase:mah","PMID:32502403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic nuclear bridge","synonyms":[{"name":"increased duration of protein localisation to mitotic nuclear bridge","type":"exact"},{"name":"increased duration of protein localization to mitotic nuclear bridge during mitotic anaphase B","type":"exact"},{"name":"increased duration of protein localization to mitotic nuclear bridge during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to mitotic nuclear bridge during vegetative growth","type":"exact"},{"name":"prolonged protein localization to mitotic nuclear bridge","type":"exact"}],"termid":"FYPO:0007545"}


id: GO:1903121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903121"}


id: PBO:0083568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF GLE2/YER107C","termid":"PBO:0083568"}


id: GO:0150013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the process in which the anatomical structures of a neuron projection are generated and organized into branches.","definition_xrefs":["GOC:aruk","PMID:17114044","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of neuron projection arborization","termid":"GO:0150011"},{"relation_name":"negatively_regulates","term_name":"neuron projection arborization","termid":"GO:0140058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection arborization","synonyms":[{"name":"negative regulation of neurite arborization","type":"exact"},{"name":"negative regulation of neurite branching","type":"exact"},{"name":"negative regulation of neuron projection branching","type":"exact"}],"termid":"GO:0150013"}


id: PBO:0014570
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Schizosaccharomyces only","termid":"PBO:0014570"}


id: GO:0036259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of raffinose that occur in the presence of oxygen.","definition_xrefs":["GOC:al","PMID:10082789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose catabolic process","termid":"GO:0034484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"aerobic raffinose catabolic process","synonyms":[{"name":"aerobic raffinose breakdown","type":"exact"},{"name":"aerobic raffinose catabolism","type":"exact"},{"name":"aerobic raffinose degradation","type":"exact"}],"termid":"GO:0036259"}


id: GO:0090661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A box H/ACA ribonucleoprotein complex that contains the RNA component of vertebrate telomerase, the enzyme essential for the replication of chromosome termini in most eukaryotes. This ribonucleoprotein complex is a structural box H/ACA RNP, which does not have the catalytic pseudouridylation function shared by the majority of H/ACA RNPs present in the cell.","definition_xrefs":["PMID:22527283","GOC:BHF_telomere","GOC:BHF","GOC:jbu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA RNP complex","termid":"GO:0072588"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"telomerase holoenzyme complex","termid":"GO:0005697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"box H/ACA telomerase RNP complex","termid":"GO:0090661"}


id: GO:0021526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of medial motor column neurons. Medial motor column neurons are generated at all rostrocaudal levels and send axons to the axial muscles (medial group) and to the body wall muscles (lateral group). Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"somatic motor neuron differentiation","termid":"GO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medial motor column neuron differentiation","termid":"GO:0021526"}


id: PBO:0045789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymal protein 3D, pseudogene","termid":"PBO:0045789"}


id: PBO:0056153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage immunometabolism regulator","termid":"PBO:0056153"}


id: GO:0043524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"negatively_regulates","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron apoptotic process","synonyms":[{"name":"down regulation of neuron apoptosis","type":"exact"},{"name":"down-regulation of neuron apoptosis","type":"exact"},{"name":"downregulation of neuron apoptosis","type":"exact"},{"name":"inhibition of neuron apoptosis","type":"narrow"},{"name":"negative regulation of neuron apoptosis","type":"narrow"},{"name":"negative regulation of programmed cell death, neurons","type":"exact"},{"name":"neuron survival","type":"narrow"}],"termid":"GO:0043524"}


id: PBO:0072297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 15","termid":"PBO:0072297"}


id: PBO:0070351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 24","termid":"PBO:0070351"}


id: GO:0060855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of venous endothelial cells out of the veins giving rise to the precursors of lymphatic endothelial cells.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"},{"relation_name":"part_of","term_name":"lymph vessel development","termid":"GO:0001945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous endothelial cell migration involved in lymph vessel development","termid":"GO:0060855"}


id: PBO:0041900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACN subunit beta associated regulatory protein","termid":"PBO:0041900"}


id: PBO:0042685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein zeta","termid":"PBO:0042685"}


id: GO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The posttranslational conversion of C-terminal glycine-extended peptides to C-terminal alpha-amidated peptides. Occurs to over half of all peptide hormones to give bioactive peptides. This is a two step process catalyzed by a peptidyl-glycine alpha-hydroxylating monooxygenase and a peptidyl-alpha-hydroxyglycine alpha-amidating lyase. In some organisms, this process is catalyzed by two separate enzymes, whereas in higher organisms, one polypeptide catalyzes both reactions.","definition_xrefs":["PMID:11028916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide modification","termid":"GO:0031179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide amidation","termid":"GO:0001519"}


id: SO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which a change has occurred within the exonic region of the splice site, 1-2 bases from boundary.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_region_variant","termid":"SO:0001630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonic_splice_region_variant","synonyms":[{"name":"ANNOVAR:exonic;splicing","type":"exact"},{"name":"Seattleseq:coding-near-splice","type":"related"},{"name":"exonic splice region variant","type":"exact"}],"termid":"SO:0002084"}


id: GO:0048648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals, having the potential to develop any of several distinct developmental paths, have their individual developmental fate determined in response to environmental and/or genetic cues. Individuals with distinct developmental fates perform different functions in a colony of social insects.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyphenic determination","termid":"GO:0048647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caste determination","termid":"GO:0048648"}


id: PBO:0051684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS3 and NABP interacting protein","termid":"PBO:0051684"}


id: GO:0051474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a glucosylglycerol from one side of a membrane to the other. A glucosylglycerol is an alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glucosylglycerol transmembrane transporter activity","termid":"GO:0051474"}


id: PBO:0057489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 607","termid":"PBO:0057489"}


id: GO:0016499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with orexin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"orexin receptor activity","termid":"GO:0016499"}


id: PBO:0068317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 17","termid":"PBO:0068317"}


id: PR:O42881
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acyl-protein thioesterase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-protein thioesterase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.04c","secondary_identifiers":["UniProtKB:O42881"],"synonyms":[{"name":"Spom972h-LYPLA2","type":"exact"}],"termid":"PR:O42881"}


id: PBO:0016093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein Csi1","termid":"PBO:0016093"}


id: PBO:0068672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 53, pseudogene","termid":"PBO:0068672"}


id: GO:0033456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"GCG codon-amino acid adaptor activity","synonyms":[{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033456"}


id: PBO:0063551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEF1 and COL16A1 antisense RNA 1","termid":"PBO:0063551"}


id: PBO:0068905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 147, pseudogene","termid":"PBO:0068905"}


id: GO:0008509
data:
  {"annotated_genes":["SJAG_01168","SJAG_01941","SJAG_00048","SJAG_03401","SJAG_01973","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61319,65133],"is_not":false,"summary":null,"term":"GO:0008509"},{"annotations":[107812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[96904,109898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903425"},{"annotations":[101819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[85531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a negatively charged ion from one side of a membrane to the other.","definition_xrefs":["GOC:dgf","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transporter activity","termid":"GO:0015075"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_01168":null,"SJAG_01941":null,"SJAG_01973":null,"SJAG_02463":null,"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"monoatomic anion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-166214"],"synonyms":[{"name":"anion transmembrane transporter activity","type":"broad"},{"name":"anion transporter activity","type":"exact"}],"termid":"GO:0008509","terms_by_termid":{"GO:0005254":null,"GO:0008308":null,"GO:0008509":null,"GO:0015379":null,"GO:1903425":null}}


id: PBO:0064044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 78","termid":"PBO:0064044"}


id: FYPO:0009000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic interphase in which cytoplasmic microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mlr","PMID:36633091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of microtubule polymerization during vegetative growth","termid":"FYPO:0005703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of cytoplasmic microtubule polymerization during mitotic interphase","synonyms":[{"name":"decreased cytoplasmic microtubule growth rate during mitotic interphase","type":"exact"},{"name":"decreased cytoplasmic microtubule growth speed during mitotic interphase","type":"exact"},{"name":"decreased cytoplasmic microtubule polymerisation speed during mitotic interphase","type":"exact"},{"name":"decreased cytoplasmic microtubule polymerization speed during mitotic interphase","type":"exact"},{"name":"decreased rate of cytoplasmic microtubule polymerisation during mitotic interphase","type":"exact"}],"termid":"FYPO:0009000"}


id: PBO:0050397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 2","termid":"PBO:0050397"}


id: PBO:0027137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation_during_glucose_starvation","termid":"PBO:0027137"}


id: GO:0002847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immune response to tumor cell","termid":"GO:0002841"},{"relation_name":"is_a","term_name":"negative regulation of tolerance induction to tumor cell","termid":"GO:0002844"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction to tumor cell","termid":"GO:0002846"},{"relation_name":"is_a","term_name":"negative regulation of peripheral T cell tolerance induction","termid":"GO:0002850"},{"relation_name":"negatively_regulates","term_name":"T cell tolerance induction to tumor cell","termid":"GO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell tolerance induction to tumor cell","synonyms":[{"name":"down regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"down-regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"downregulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"inhibition of T cell tolerance induction to tumor cell","type":"narrow"}],"termid":"GO:0002847"}


id: GO:1990385
data:
  {"annotated_genes":["SJAG_04412","SJAG_01837","SJAG_03073","SJAG_00930"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97504,99648,112840,114861],"is_not":false,"summary":null,"term":"GO:1990385"}]},"cv_name":"cellular_component","definition":"The area in the center of the meiotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PMID:12707312","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle midzone","termid":"GO:0051233"},{"relation_name":"part_of","term_name":"meiotic spindle","termid":"GO:0072687"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_01837":null,"SJAG_03073":null,"SJAG_04412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"meiotic spindle midzone","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990385","terms_by_termid":{"GO:1990385":null}}


id: PBO:0088488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase Nta1","termid":"PBO:0088488"}


id: GO:0048659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of smooth muscle cells, resulting in the expansion of a cell population.","definition_xrefs":["PMID:1840698","CL:0000192","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell proliferation","termid":"GO:0033002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle cell proliferation","synonyms":[{"name":"SMC proliferation","type":"exact"}],"termid":"GO:0048659"}


id: PBO:0044100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A8","termid":"PBO:0044100"}


id: GO:1900660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of emericellamide biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of emericellamide biosynthetic process","termid":"GO:1900658"},{"relation_name":"positively_regulates","term_name":"emericellamide biosynthetic process","termid":"GO:1900557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748","GO:0006629"],"is_obsolete":false,"name":"positive regulation of emericellamide biosynthetic process","synonyms":[{"name":"activation of emericellamide anabolism","type":"exact"},{"name":"activation of emericellamide biosynthesis","type":"exact"},{"name":"activation of emericellamide biosynthetic process","type":"narrow"},{"name":"activation of emericellamide formation","type":"exact"},{"name":"activation of emericellamide synthesis","type":"exact"},{"name":"positive regulation of emericellamide anabolism","type":"exact"},{"name":"positive regulation of emericellamide biosynthesis","type":"exact"},{"name":"positive regulation of emericellamide formation","type":"exact"},{"name":"positive regulation of emericellamide synthesis","type":"exact"},{"name":"up regulation of emericellamide anabolism","type":"exact"},{"name":"up regulation of emericellamide biosynthesis","type":"exact"},{"name":"up regulation of emericellamide biosynthetic process","type":"exact"},{"name":"up regulation of emericellamide formation","type":"exact"},{"name":"up regulation of emericellamide synthesis","type":"exact"},{"name":"up-regulation of emericellamide anabolism","type":"exact"},{"name":"up-regulation of emericellamide biosynthesis","type":"exact"},{"name":"up-regulation of emericellamide biosynthetic process","type":"exact"},{"name":"up-regulation of emericellamide formation","type":"exact"},{"name":"up-regulation of emericellamide synthesis","type":"exact"},{"name":"upregulation of emericellamide anabolism","type":"exact"},{"name":"upregulation of emericellamide biosynthesis","type":"exact"},{"name":"upregulation of emericellamide biosynthetic process","type":"exact"},{"name":"upregulation of emericellamide formation","type":"exact"},{"name":"upregulation of emericellamide synthesis","type":"exact"}],"termid":"GO:1900660"}


id: PBO:0085000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 family E3 ubiquitin ligase; regulates processes including: MVB sorting, the heat shock response, transcription, endocytosis and ribosome stability; ubiquitinates Sec23p, Sna3p, Ste4p, Nfi1p, Rpo21p, Sem1p, Dip5p and Put4p; autoubiquitinates; deubiquitinated by Ubp2p; regulated by SUMO ligase Siz1p, in turn regulates Siz1p SUMO ligase activity; required for efficient Golgi-to-ER trafficking in COPI mutants; mutant tolerates aneuploidy; human homolog implicated in Liddle syndrome","termid":"PBO:0085000"}


id: PBO:0049323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2A1 antisense RNA 1","termid":"PBO:0049323"}


id: PATO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality inhering in a process by virtue of the bearer's being essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity of occurrent","termid":"PATO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessary (occurrent)","termid":"PATO:0001638"}


id: GO:0052547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidase activity, the hydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidase activity","synonyms":[{"name":"peptidase regulator activity","type":"related"}],"termid":"GO:0052547"}


id: PBO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor beta","termid":"PBO:0047760"}


id: PBO:0071604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 21","termid":"PBO:0071604"}


id: GO:0019756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyanogenic glycosides, any glycoside containing a cyano group that is released as hydrocyanic acid on acid hydrolysis; such compounds occur in the kernels of various fruits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"cyanogenic glycoside metabolic process","termid":"GO:0042341"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"nitrile biosynthetic process","termid":"GO:0080028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"cyanogenic glycoside biosynthetic process","synonyms":[{"name":"cyanogenic glycoside anabolism","type":"exact"},{"name":"cyanogenic glycoside biosynthesis","type":"exact"},{"name":"cyanogenic glycoside formation","type":"exact"},{"name":"cyanogenic glycoside synthesis","type":"exact"}],"termid":"GO:0019756"}


id: GO:0021518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a commissural neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"commissural neuron differentiation in spinal cord","termid":"GO:0021528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord commissural neuron specification","termid":"GO:0021518"}


id: GO:1902430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amyloid-beta formation.","definition_xrefs":["PMID:22992957","GOC:TermGenie","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"regulation of amyloid-beta formation","termid":"GO:1902003"},{"relation_name":"is_a","term_name":"negative regulation of amyloid precursor protein catabolic process","termid":"GO:1902992"},{"relation_name":"negatively_regulates","term_name":"amyloid-beta formation","termid":"GO:0034205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amyloid-beta formation","synonyms":[{"name":"down regulation of beta-amyloid formation","type":"exact"},{"name":"down-regulation of beta-amyloid formation","type":"exact"},{"name":"downregulation of beta-amyloid formation","type":"exact"},{"name":"inhibition of beta-amyloid formation","type":"narrow"},{"name":"negative regulation of beta-amyloid formation","type":"exact"}],"termid":"GO:1902430"}


id: GO:0052857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-NADPHX = (S)-NADPHX.","definition_xrefs":["PMID:21994945"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPHX epimerase activity (obsolete GO:0052857)","termid":"GO:0052857"}


id: PR:P41390
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An amidophosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02227","PANTHER:PTHR11907:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidophosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.08c","secondary_identifiers":["UniProtKB:P41390"],"synonyms":[{"name":"ATase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPAT","type":"exact"},{"name":"glutamine phosphoribosylpyrophosphate amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41390"}


id: PBO:0076010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1 pseudogene 1","termid":"PBO:0076010"}


id: GO:0033015
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"tetrapyrrole catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrapyrrole breakdown","type":"exact"},{"name":"tetrapyrrole catabolism","type":"exact"},{"name":"tetrapyrrole degradation","type":"exact"}],"termid":"GO:0033015","terms_by_termid":{"GO:0042167":null}}


id: GO:1904645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a amyloid-beta stimulus.","definition_xrefs":["PMID:23555824","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amyloid-beta","synonyms":[{"name":"response to beta-amyloid","type":"exact"},{"name":"response to beta-amyloids","type":"related"}],"termid":"GO:1904645"}


id: PBO:0046566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 8, envelope","termid":"PBO:0046566"}


id: PBO:0069382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 642, pseudogene","termid":"PBO:0069382"}


id: PBO:0091949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf12 (truncated)","termid":"PBO:0091949"}


id: PBO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.-.-.-","termid":"PBO:0000309"}


id: GO:0045818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycogen catabolic process","termid":"GO:0005981"},{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of glycogen metabolic process","termid":"GO:0070874"},{"relation_name":"negatively_regulates","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006091","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycogen catabolic process","synonyms":[{"name":"down regulation of glycogen catabolic process","type":"exact"},{"name":"down-regulation of glycogen catabolic process","type":"exact"},{"name":"downregulation of glycogen catabolic process","type":"exact"},{"name":"inhibition of glycogen catabolic process","type":"narrow"},{"name":"negative regulation of glycogen breakdown","type":"exact"},{"name":"negative regulation of glycogen catabolism","type":"exact"},{"name":"negative regulation of glycogen degradation","type":"exact"},{"name":"negative regulation of glycogenolysis","type":"exact"}],"termid":"GO:0045818"}


id: PBO:0078469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-7","termid":"PBO:0078469"}


id: PBO:0055332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2760","termid":"PBO:0055332"}


id: GO:0070723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cholesterol stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sterol","termid":"GO:0036314"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cholesterol","termid":"GO:0070723"}


id: GO:1905084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrial translational elongation.","definition_xrefs":["PMID:25738458","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational elongation","termid":"GO:0045901"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translational elongation","termid":"GO:1905082"},{"relation_name":"positively_regulates","term_name":"mitochondrial translational elongation","termid":"GO:0070125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mitochondrial translational elongation","synonyms":[{"name":"activation of mitochondrial translation elongation","type":"narrow"},{"name":"activation of mitochondrial translational elongation","type":"narrow"},{"name":"positive regulation of mitochondrial translation elongation","type":"exact"},{"name":"up regulation of mitochondrial translation elongation","type":"exact"},{"name":"up regulation of mitochondrial translational elongation","type":"exact"},{"name":"up-regulation of mitochondrial translation elongation","type":"exact"},{"name":"up-regulation of mitochondrial translational elongation","type":"exact"},{"name":"upregulation of mitochondrial translation elongation","type":"exact"},{"name":"upregulation of mitochondrial translational elongation","type":"exact"}],"termid":"GO:1905084"}


id: GO:0009892
data:
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id: PR:Q10436
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id: FYPO:0000187
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id: PBO:0036144
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id: GO:0005875
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id: PBO:0058180
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id: GO:0004908
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id: PBO:0031743
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id: PR:O94681
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id: GO:0046916
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id: PBO:0054179
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id: PBO:0041906
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id: PBO:0071526
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id: FYPO:0003366
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id: PBO:0078933
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id: GO:0010200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chitin","termid":"GO:0010200"}


id: PBO:0054794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2208","termid":"PBO:0054794"}


id: PBO:0076544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine aminotransferase","termid":"PBO:0076544"}


id: GO:0060434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bronchus is generated and organized. The bronchus is the portion of the airway that connects to the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"bronchus development","termid":"GO:0060433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus morphogenesis","termid":"GO:0060434"}


id: PBO:0052655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 23","termid":"PBO:0052655"}


id: FYECO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using camptothecin (CPT) and subsequently released from the block.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPT block and release","termid":"FYECO:0000386"}


id: PBO:0034122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-surrounds","termid":"PBO:0034122"}


id: PBO:0027473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mtDNA_absent_from_cell","termid":"PBO:0027473"}


id: PBO:0082851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-sensing transcription factor; involved in regulation of genes required for high affinity copper transport; required for regulation of yeast copper genes in response to DNA-damaging agents; undergoes changes in redox state in response to changing levels of copper or MMS","termid":"PBO:0082851"}


id: GO:0006751
data:
  {"annotated_genes":["SJAG_00903","SJAG_01612","SJAG_03316","SJAG_04858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94449,95281,98354,104846],"is_not":false,"summary":null,"term":"GO:0006751"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione metabolic process","termid":"GO:0006749"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_01612":null,"SJAG_03316":null,"SJAG_04858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"glutathione catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione breakdown","type":"exact"},{"name":"glutathione catabolism","type":"exact"},{"name":"glutathione degradation","type":"exact"}],"termid":"GO:0006751","terms_by_termid":{"GO:0006751":null}}


id: PBO:0087567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of telomeric Ku complex (Yku70p-Yku80p); involved in telomere length maintenance, structure and telomere position effect; required for localization of telomerase ribonucleoprotein via interaction with TLC1 guide RNA; relocates to sites of double-strand cleavage to promote nonhomologous end joining during DSB repair; colocalizes with quiescent cell telomere hyperclusters","termid":"PBO:0087567"}


id: GO:0001059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of RNA from a DNA template by RNA polymerase IV, originating at a Pol IV-specific promoter.","definition_xrefs":["GOC:txnOH","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transcription by RNA polymerase IV","synonyms":[{"name":"transcription from RNA pol IV promoter","type":"exact"},{"name":"transcription from RNA polymerase IV promoter","type":"exact"}],"termid":"GO:0001059"}


id: PBO:0043768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX17 pseudogene 1","termid":"PBO:0043768"}


id: FYPO:0005885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to myxothiazol. Cells stop growing (and may die) at a concentration of myxothiazol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to myxothiazol","synonyms":[{"name":"hypersensitive to myxothiazol","type":"exact"},{"name":"sensitive to MXT","type":"exact"},{"name":"sensitive to myxothiazol during mitotic cell cycle","type":"related"},{"name":"sensitive to myxothiazol during vegetative growth","type":"exact"}],"termid":"FYPO:0005885"}


id: FYPO:0002173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during the meiotic cell cycle measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased level of meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of meiotic cell cycle gene mRNA during vegetative growth","type":"related"},{"name":"increased level of meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of meiotic nuclear division gene mRNA during vegetative growth","type":"exact"},{"name":"increased meiotic gene mRNA accumulation during vegetative growth","type":"related"},{"name":"untimely expression of gametogenic genes during mitotic growth","type":"exact"}],"termid":"FYPO:0002173"}


id: GO:0003156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of animal organ formation. Organ formation is the process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment.","definition_xrefs":["GOC:mtg_heart","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"animal organ formation","termid":"GO:0048645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of animal organ formation","termid":"GO:0003156"}


id: PBO:0002512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor Srp2","termid":"PBO:0002512"}


id: GO:0034144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 4 signaling pathway","termid":"GO:0034143"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"negative regulation of TLR4 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034144"}


id: PBO:0072251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 26","termid":"PBO:0072251"}


id: GO:1904589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein import.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11406629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"regulates","term_name":"protein import","termid":"GO:0017038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of protein import","synonyms":[{"name":"regulation of protein uptake","type":"exact"}],"termid":"GO:1904589"}


id: PBO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein, DNAJC9 family (predicted)","termid":"PBO:0002261"}


id: SO:0000812
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone invalidated by polyA priming.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_genomic_polyA_primed_cDNA","termid":"SO:0000415"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyA_primed_cDNA_clone","synonyms":[{"name":"polyA primed cDNA clone","type":"exact"}],"termid":"SO:0000812"}


id: PR:O59805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC550.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidase C550.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.07","synonyms":[{"name":"Spom972h-SPCC550.07","type":"exact"}],"termid":"PR:O59805"}


id: GO:0005222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","termid":"GO:0005221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"intracellularly cAMP-activated cation channel activity","synonyms":[{"name":"HCN channel activity","type":"broad"},{"name":"hyperpolarization-activated cyclic nucleotide-gated channel activity","type":"broad"},{"name":"intracellular 3',5' cAMP activated cation channel activity","type":"exact"},{"name":"intracellular 3',5'-cAMP activated cation channel activity","type":"exact"},{"name":"intracellular adenosine 3',5'-cyclophosphate activated cation channel activity","type":"exact"},{"name":"intracellular cAMP activated cation channel activity","type":"exact"},{"name":"intracellular cAMP-activated cation channel activity","type":"exact"},{"name":"intracellular cyclic AMP activated cation channel activity","type":"exact"}],"termid":"GO:0005222"}


id: SO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a variant from the genomic sequence is commonly found in the general population.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_frequency","termid":"SO:0001763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"common_variant","synonyms":[{"name":"common variant","type":"exact"}],"termid":"SO:0001767"}


id: PBO:0076556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymus, brain and testes associated","termid":"PBO:0076556"}


id: PBO:0085622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in energy metabolism under respiratory conditions; abundance is increased upon intracellular iron depletion or in response to DNA replication stress; suppresses pro-apoptotic effect of expressing human BAX in yeast cells; RGI1 has a paralog, RGI2, that arose from the whole genome duplication","termid":"PBO:0085622"}


id: GO:0000298
data:
  {"annotated_genes":["SJAG_00570","SJAG_04870","SJAG_00132"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84754,107937,112019],"is_not":false,"summary":null,"term":"GO:0000298"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: polyphosphate + n H2O = (n+1) oligophosphate. The product contains 4 or 5 phosphate residues.","definition_xrefs":["EC:3.6.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00132":null,"SJAG_00570":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"endopolyphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:22452","MetaCyc:ENDOPOLYPHOSPHATASE-RXN"],"synonyms":[{"name":"metaphosphatase activity","type":"broad"},{"name":"polymetaphosphatase activity","type":"related"},{"name":"polyphosphatase activity","type":"broad"},{"name":"polyphosphate depolymerase activity","type":"broad"},{"name":"polyphosphate polyphosphohydrolase activity","type":"related"}],"termid":"GO:0000298","terms_by_termid":{"GO:0000298":null}}


id: GO:0090146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of mitochondria to the correct region of the cell that contributes to the process of mitochondrial fission.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of mitochondrion localization involved in mitochondrial fission (obsolete GO:0090146)","synonyms":[{"name":"establishment of mitochondrion localisation involved in mitochondrial fission","type":"exact"},{"name":"mitochondrial localization involved in mitochondrial fission","type":"related"}],"termid":"GO:0090146"}


id: GO:0004230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a N-terminal glutamate (and to a lesser extent aspartate) from a peptide.","definition_xrefs":["EC:3.4.11.7"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamyl aminopeptidase activity (obsolete GO:0004230)","secondary_identifiers":["MetaCyc:3.4.11.7-RXN"],"synonyms":[{"name":"Ca2+-activated glutamate aminopeptidase activity","type":"related"},{"name":"L-aspartate aminopeptidase activity","type":"related"},{"name":"aminopeptidase A","type":"related"},{"name":"angiotensinase A","type":"related"},{"name":"angiotensinase A2","type":"related"},{"name":"antigen BP-1/6C3 of mouse B lymphocytes","type":"related"},{"name":"aspartate aminopeptidase activity","type":"related"},{"name":"glutamyl aminopeptidase activity","type":"exact"},{"name":"glutamyl peptidase activity","type":"related"},{"name":"membrane aminopeptidase II","type":"related"}],"termid":"GO:0004230"}


id: PBO:0057447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 567","termid":"PBO:0057447"}


id: PATO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001067 absolute strain (obsolete PATO:0001067)","termid":"PATO:0001067"}


id: PBO:0049282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 1","termid":"PBO:0049282"}


id: FYPO:0001451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to freezing.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to cold","termid":"FYPO:0001450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to freezing","synonyms":[{"name":"increased growth during cellular response to freezing","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to freezing","type":"exact"},{"name":"resistance to freezing during mitotic cell cycle","type":"related"},{"name":"resistance to freezing during vegetative growth","type":"exact"},{"name":"resistant to freeze-thawing","type":"related"},{"name":"resistant to freezing","type":"exact"}],"termid":"FYPO:0001451"}


id: PBO:0075078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 128","termid":"PBO:0075078"}


id: PR:Q9UUA6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phospholipid phosphatase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol pyrophosphate phosphatase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.18","secondary_identifiers":["UniProtKB:Q9UUA6"],"synonyms":[{"name":"DGPP phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PLPP4","type":"exact"},{"name":"phosphatidate phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUA6"}


id: PBO:0004244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine decarboxylase proenzyme Spe2","termid":"PBO:0004244"}


id: PBO:0069467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 732, pseudogene","termid":"PBO:0069467"}


id: PBO:0050601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 11-beta dehydrogenase 1","termid":"PBO:0050601"}


id: RO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_killed_by","termid":"RO:0002627"}


id: PBO:0090916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone","termid":"PBO:0090916"}


id: PR:O13829
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp101 gene.","definition_xrefs":["UniProtKB:O13829","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 small nuclear ribonucleoprotein 70 kDa homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.13","synonyms":[{"name":"Spom972h-usp101","type":"exact"},{"name":"U1 70K (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U1 small nuclear ribonucleoprotein usp101 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U1 snRNP 70 kDa homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U1 snRNP protein usp101 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U1-70K (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13829"}


id: PBO:0036201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_microtubule_bundle","termid":"PBO:0036201"}


id: GO:0018447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: chloral hydrate = 3 H+ + 2 e- + trichloroacetate, and chloral hydrate + H2 = H2O + trichloroethanol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chloral hydrate dehydrogenase activity (obsolete GO:0018447)","termid":"GO:0018447"}


id: PBO:0048805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 1","termid":"PBO:0048805"}


id: PBO:0043600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer associated 1","termid":"PBO:0043600"}


id: PBO:0059424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRS2 pseudogene 1","termid":"PBO:0059424"}


id: PBO:0070763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 19","termid":"PBO:0070763"}


id: GO:0034948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dihydroxypseudooxynicotine + H2O = 2,6-dihydroxypyridine + 4-methylaminobutyrate.","definition_xrefs":["UM-BBD_reactionID:r0482"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dihydroxypseudooxynicotine hydrolase activity (obsolete GO:0034948)","termid":"GO:0034948"}


id: GO:0070962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070961"},{"relation_name":"is_a","term_name":"positive regulation of defense response to bacterium","termid":"GO:1900426"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of bacterium","synonyms":[{"name":"activation of neutrophil mediated killing of bacterium","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of bacterium","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"upregulation of neutrophil mediated killing of bacterium","type":"exact"}],"termid":"GO:0070962"}


id: GO:0032218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of riboflavin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Riboflavin (vitamin B2) is a water-soluble B-complex vitamin, converted in the cell to FMN and FAD, cofactors required for the function of flavoproteins.","definition_xrefs":["GOC:rn","PMID:16204239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"riboflavin transport","termid":"GO:0032218"}


id: PBO:0047441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma binding protein","termid":"PBO:0047441"}


id: PBO:0057924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3649","termid":"PBO:0057924"}


id: PBO:0045085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like canonical Notch ligand 3","termid":"PBO:0045085"}


id: PBO:0088094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uncharacterized protein of unknown function","termid":"PBO:0088094"}


id: PBO:0043161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing DFFA like effector a","termid":"PBO:0043161"}


id: GO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric complex which transfers a palmitoyl group onto serine, forming 3-dehydro-D-sphinganine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase complex","termid":"GO:0002178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"homodimeric serine palmitoyltransferase complex","termid":"GO:0002179"}


id: _global:promoter_of
data:
  {"annotation_feature_type":"gene","cv_name":"SO_feature_relations","definition":"Relation between a promoter and a gene.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_of","termid":"_global:promoter_of"}


id: PBO:0005731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type zinc finger protein","termid":"PBO:0005731"}


id: PBO:0042949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3","termid":"PBO:0042949"}


id: SO:0000204
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region at the 5' end of a mature transcript (preceding the initiation codon) that is not translated into a protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_UTR","secondary_identifiers":["http://en.wikipedia.org/wiki/5'_UTR"],"synonyms":[{"name":"5' UTR","type":"exact"},{"name":"INSDC_feature:5'UTR","type":"exact"},{"name":"five prime UTR","type":"exact"},{"name":"five_prime_untranslated_region","type":"exact"}],"termid":"SO:0000204"}


id: GO:0017135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The interaction with synapse-associated membrane-associated protein with guanylate kinase activity.","definition_xrefs":["PMID:10207005"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane-associated protein with guanylate kinase activity interacting (obsolete GO:0017135)","synonyms":[{"name":"membrane-associated protein with guanylate kinase activity interacting","type":"exact"}],"termid":"GO:0017135"}


id: PBO:0068057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 362","termid":"PBO:0068057"}


id: GO:0090186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of pancreatic juice secretion","termid":"GO:0090186"}


id: GO:0046568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NAD(P)+ = 3-methylbutanal + NAD(P)H + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["EC:1.1.1.265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase [NAD(P)+] activity","termid":"GO:0018455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-methylbutanal reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.1.1.265-RXN"],"synonyms":[{"name":"3-methylbutanal reductase [NAD(P)] activity","type":"related"},{"name":"3-methylbutanol:NAD(P) oxidoreductase activity","type":"exact"},{"name":"3-methylbutyraldehyde reductase activity","type":"exact"},{"name":"isoamyl alcohol oxidase activity","type":"exact"}],"termid":"GO:0046568"}


id: PBO:0027571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_pore_distribution_during_mitotic_interphase","termid":"PBO:0027571"}


id: GO:0103033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-lactose = beta-(1->6)-galactobiose.","definition_xrefs":["EC:5.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular acyltransferase activity","termid":"GO:0016867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"beta-galactosidase activity (lactose isomerization)","secondary_identifiers":["MetaCyc:RXN0-5363"],"termid":"GO:0103033"}


id: GO:0110122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a myotube cell from one site to another, often during the development of a multicellular organism. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate, and fuse.","definition_xrefs":["GOC:ha","PMID:29122742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell migration","termid":"GO:0014812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotube cell migration","termid":"GO:0110122"}


id: PR:Q9UTM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC139.05 gene.","definition_xrefs":["UniProtKB:Q9UTM8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase C139.05 [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.05","synonyms":[{"name":"SSDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC139.05","type":"exact"}],"termid":"PR:Q9UTM8"}


id: PBO:0048143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD6 antisense RNA 1","termid":"PBO:0048143"}


id: FYPO:0005420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron assimilation RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Iron assimilation RNAs are transcribed from genes whose products are involved in any process in which iron is solubilized and transported into a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased level of iron assimilation gene mRNA during vegetative growth","synonyms":[{"name":"increased iron assimilation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of iron assimilation gene RNA during vegetative growth","type":"exact"},{"name":"increased level of iron assimilation gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of iron assimilation gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005420"}


id: PBO:0053910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1204","termid":"PBO:0053910"}


id: GO:0019078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A form of viral release in which the viral particles bud out through cellular membranes, resulting in cell lysis. It is also a form of viral envelopment.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete lytic viral budding (obsolete GO:0019078)","synonyms":[{"name":"lytic viral budding","type":"exact"}],"termid":"GO:0019078"}


id: PBO:0027919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_papuamide_B_during_vegetative_growth","termid":"PBO:0027919"}


id: PBO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member C","termid":"PBO:0047243"}


id: PBO:0059744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 18","termid":"PBO:0059744"}


id: GO:0098698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a postsynaptic specialization, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"is_a","term_name":"postsynaptic specialization organization","termid":"GO:0099084"},{"relation_name":"part_of","term_name":"postsynapse assembly","termid":"GO:0099068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"postsynaptic specialization assembly","termid":"GO:0098698"}


id: PBO:0056958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 20a","termid":"PBO:0056958"}


id: PBO:0057218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378f","termid":"PBO:0057218"}


id: PBO:0050857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of little elongation complex ELL subunit 2 pseudogene 2","termid":"PBO:0050857"}


id: GO:0002537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of nitric oxide following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitric oxide production involved in inflammatory response","synonyms":[{"name":"nitric oxide production involved in acute inflammatory response","type":"broad"},{"name":"production of nitric oxide involved in acute inflammatory response","type":"broad"},{"name":"production of nitric oxide involved in inflammatory response","type":"exact"}],"termid":"GO:0002537"}


id: PR:Q10098
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC15F9.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15F9.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15F9.01c","synonyms":[{"name":"Spom972h-SPAC15F9.01c","type":"exact"}],"termid":"PR:Q10098"}


id: GO:0002594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation via MHC class Ib","synonyms":[{"name":"activation of antigen processing and presentation via MHC class Ib","type":"narrow"},{"name":"stimulation of antigen processing and presentation via MHC class Ib","type":"narrow"},{"name":"up regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"up-regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"upregulation of antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002594"}


id: PBO:0077135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOR signaling pathway regulator","termid":"PBO:0077135"}


id: GO:0045858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heritable epigenetic process that increases the frequency, rate or extent of protein function by self-perpetuating conformational conversions of normal proteins in healthy cells. This is distinct from, though mechanistically analogous to, disease states associated with prion propagation and amyloidogenesis. A single protein, if it carries a glutamine/asparagine-rich ('prion') domain, can sometimes stably exist in at least two distinct physical states, each associated with a different phenotype; propagation of one of these traits is achieved by a self-perpetuating change in the protein from one form to the other, mediated by conformational changes in the glutamine/asparagine-rich domain. Prion domains are both modular and transferable to other proteins, on which they can confer a heritable epigenetic alteration of function; existing bioinformatics data indicate that they are rare in non-eukarya, but common in eukarya.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of molecular function, epigenetic (obsolete GO:0045858)","synonyms":[{"name":"activation of protein activity, epigenetic","type":"narrow"},{"name":"positive regulation of protein activity, epigenetic","type":"exact"},{"name":"stimulation of protein activity, epigenetic","type":"narrow"},{"name":"up regulation of protein activity, epigenetic","type":"exact"},{"name":"up-regulation of protein activity, epigenetic","type":"exact"},{"name":"upregulation of protein activity, epigenetic","type":"exact"}],"termid":"GO:0045858"}


id: PBO:0083919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forms the dehydrodolichyl diphosphate synthase (DDS) complex with NUS1; involved in synthesis of long-chain dolichols (19-22 isoprene units; as opposed to Rer2p which synthesizes shorter-chain dolichols); localizes to lipid bodies; transcription is induced during stationary phase","termid":"PBO:0083919"}


id: PBO:0077586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymopoietin","termid":"PBO:0077586"}


id: GO:0004074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bilirubin IXalpha + NAD(P)+ = biliverdin IXalpha + NAD(P)H + H+.","definition_xrefs":["EC:1.3.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"biliverdin reductase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:BILIVERDIN-REDUCTASE-RXN","Reactome:R-HSA-189384"],"synonyms":[{"name":"bilirubin:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0004074"}


id: GO:1901891
data:
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id: SO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic 2 bp region bordering exon. A splice_site that adjacent_to exon and overlaps intron.","definition_xrefs":["SO:ke","SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site","termid":"SO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis_splice_site","synonyms":[{"name":"cis splice site","type":"exact"}],"termid":"SO:0001419"}


id: GO:0044017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 27) = CoA + histone H3 N6-acetyl-L-lysine (position 27).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0034212","GO:0016746","GO:0003674","GO:0016740","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H3K27 acetyltransferase activity","secondary_identifiers":["EC:2.3.1.48"],"synonyms":[{"name":"histone H3-K27 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K27 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K27 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0044017"}


id: PBO:0092024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamine (uug), mitochondrial","termid":"PBO:0092024"}


id: PR:O59802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol N-acetylglucosaminyltransferase subunit C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12982:SF0","PRO:DNx","OMA:SCHPO04589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.04c","secondary_identifiers":["UniProtKB:O59802"],"synonyms":[{"name":"Spom972h-PIGC","type":"exact"}],"termid":"PR:O59802"}


id: PBO:0069584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 858, pseudogene","termid":"PBO:0069584"}


id: GO:0035504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myosin light chain kinase activity.","definition_xrefs":["GOC:bf","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myosin light chain kinase activity","termid":"GO:0035504"}


id: PBO:0088960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-ribose methyltransferase Trm7","termid":"PBO:0088960"}


id: GO:0018633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethyl sulfide + H+ + NADH + O2 = formaldehyde + H2O + methanethiol + NAD+.","definition_xrefs":["RHEA:31355","PMID:21216999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dimethyl sulfide monooxygenase activity","secondary_identifiers":["EC:1.14.13.131","UM-BBD_reactionID:r0208"],"synonyms":[{"name":"dimethyl sulphide monooxygenase activity","type":"exact"}],"termid":"GO:0018633"}


id: PBO:0077797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin family 1 member B","termid":"PBO:0077797"}


id: PBO:0052337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2026","termid":"PBO:0052337"}


id: PBO:0030121
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_zinc_ion_starvation","termid":"PBO:0030121"}


id: PBO:0079134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE domain containing 1","termid":"PBO:0079134"}


id: GO:0000796
data:
  {"annotated_genes":["SJAG_03161","SJAG_03832","SJAG_00871","SJAG_03682","SJAG_00768"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99277,108190,109533,112074,112693],"is_not":false,"summary":null,"term":"GO:0000796"}]},"cv_name":"cellular_component","definition":"A multisubunit protein complex that plays a central role in chromosome condensation in meiosis and mitosis.","definition_xrefs":["PMID:21795393","GOC:elh","PMID:17268547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00768":null,"SJAG_00871":null,"SJAG_03161":null,"SJAG_03682":null,"SJAG_03832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"condensin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008620","GO:0000799","GO:0000797","GO:0005676","GO:0061814","GO:0008621"],"synonyms":[{"name":"13S condensin complex","type":"narrow"},{"name":"8S condensin complex","type":"narrow"},{"name":"SMC complex","type":"related"},{"name":"Smc2-Smc4 complex","type":"narrow"},{"name":"condensin I complex","type":"narrow"},{"name":"condensin core heterodimer","type":"narrow"},{"name":"nuclear condensin complex","type":"narrow"}],"termid":"GO:0000796","terms_by_termid":{"GO:0000796":null}}


id: PBO:0003265
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Immunosuppressant and Temperature Sensitive","termid":"PBO:0003265"}


id: PBO:0090450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of chronological lifespan protein Ecl1","termid":"PBO:0090450"}


id: GO:2000024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leaf development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leaf development","termid":"GO:2000024"}


id: PBO:0042384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD276 molecule","termid":"PBO:0042384"}


id: GO:0042323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the duration or quality of non-rapid eye movement (NREM) sleep.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of circadian sleep/wake cycle, sleep","termid":"GO:0042321"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, non-REM sleep","termid":"GO:0045188"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, non-REM sleep","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, non-REM sleep","type":"narrow"},{"name":"negative regulation of non-REM sleep","type":"exact"}],"termid":"GO:0042323"}


id: PBO:0003772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain-binding protein 4 (predicted)","termid":"PBO:0003772"}


id: PR:000050537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf3 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been trimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00083.","definition_xrefs":["PMID:22150589","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf3 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050528"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf3/Me3:(K20)","pombase_gene_id":"SPBC1105.12","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00083","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf3 gene translation product, initiator methionine removed trimethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf3/InitMet-/Me3:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00083","type":"broad"},{"name":"hhf3/Me3:(K20)","type":"exact"},{"name":"histone H4 K20me3 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf3 K20me3 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050537"}


id: PBO:0042237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle progression 1","termid":"PBO:0042237"}


id: PBO:0070194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 116 pseudogene","termid":"PBO:0070194"}


id: PBO:0051916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 1 pseudogene 1","termid":"PBO:0051916"}


id: GO:0035911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the descending aorta are generated and organized. The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["Wikipedia:Descending_aorta","MA:0002571","UBERON:0001514","GOC:dgh","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"descending aorta development","termid":"GO:0035906"},{"relation_name":"part_of","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"descending aorta morphogenesis","termid":"GO:0035911"}


id: GO:0016540
data:
  {"annotated_genes":["SJAG_02902"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92476],"is_not":false,"summary":null,"term":"GO:0016540"}]},"cv_name":"biological_process","definition":"Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein.","definition_xrefs":["PMID:9335337","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02902":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"protein autoprocessing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016540","terms_by_termid":{"GO:0016540":null}}


id: GO:0050072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7-methylguanosine 5'-triphospho-5'-polynucleotide + H2O = 7-methylguanosine 5'-phosphate + polynucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete m7G(5')pppN diphosphatase activity (obsolete GO:0050072)","synonyms":[{"name":"M(7)G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:0050072"}


id: PBO:0039766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 1 (Colton blood group)","termid":"PBO:0039766"}


id: PBO:0004444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRDE-2 family protein (predicted)","termid":"PBO:0004444"}


id: PBO:0051054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2/OR15-2A (non-functional)","termid":"PBO:0051054"}


id: GO:0010378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the circadian clock maintains robust and accurate timing over a broad range of physiological temperatures. The circadian clock is an endogenous 24-h timer found in most eukaryotes and in photosynthetic bacteria. The clock drives rhythms in the physiology, biochemistry, and metabolism of the organisms.","definition_xrefs":["PMID:16617099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"temperature compensation of the circadian clock","synonyms":[{"name":"regulation of the circadian clock by temperature","type":"related"}],"termid":"GO:0010378"}


id: GO:0007462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the R1/R6 photoreceptors commit to their cell fate. R1 and R6 are paired photoreceptors which contribute the outer rhabdomeres.","definition_xrefs":["PMID:3076112","PMID:3937883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor fate commitment","termid":"GO:0001752"},{"relation_name":"part_of","term_name":"R1/R6 cell differentiation","termid":"GO:0048052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R1/R6 cell fate commitment","termid":"GO:0007462"}


id: GO:0072464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of meiotic spindle assembly checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to meiotic cell cycle checkpoint signaling","termid":"GO:0072410"},{"relation_name":"is_a","term_name":"response to spindle assembly checkpoint signaling","termid":"GO:0072485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to meiotic spindle assembly checkpoint signaling","synonyms":[{"name":"meiotic spindle assembly checkpoint effector process","type":"exact"},{"name":"response to signal involved in meiotic spindle assembly checkpoint","type":"exact"}],"termid":"GO:0072464"}


id: PBO:0048683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 2","termid":"PBO:0048683"}


id: MOD:01791
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal phosphohistidine residue to phosphohistidine immonium ion.","definition_xrefs":["PubMed:20847263","PubMed:18688235","PubMed:17690871"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"phosphorylated L-histidine","termid":"MOD:00890"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphohistidine immonium ion","synonyms":[{"name":"2-(1H-imidazolyl)ethaniminium","type":"exact"}],"termid":"MOD:01791"}


id: PATO:0001890
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being divided into three branches.","definition_xrefs":["InfoVisual:InfoVisual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"},{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite","synonyms":[{"name":"trifurcate","type":"exact"}],"termid":"PATO:0001890"}


id: FYPO:0006624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in the plasma membrane is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"},{"relation_name":"is_a","term_name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level","termid":"FYPO:0006488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane","synonyms":[{"name":"increased 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level in plasma membrane","type":"exact"},{"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in cell membrane","type":"exact"},{"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"increased plasma membrane PI(3,4,5)P3 level","type":"exact"},{"name":"increased plasma membrane phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006624"}


id: GO:0102473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: eriodictyol dibenzoylmethane tautomer + UDP-alpha-D-glucose = 8C-beta-D-glucosyl-2-hydroxyeriodictyol + UDP(3-) + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete eriodictyol dibenzoylmethane tautomer 8C-glucosyltransferase activity (obsolete GO:0102473)","termid":"GO:0102473"}


id: PBO:0066892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 192","termid":"PBO:0066892"}


id: PBO:0061527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSL1 component of MIS12 kinetochore complex","termid":"PBO:0061527"}


id: GO:0032438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule organization","termid":"GO:0048753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanosome organization","synonyms":[{"name":"melanosome organisation","type":"exact"},{"name":"melanosome organization and biogenesis","type":"related"}],"termid":"GO:0032438"}


id: GO:0000943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of the retrotransposon RNA genome, reverse transcriptase, integrase, and associated molecules required for reproduction and integration of the retrotransposon into the host genome; the main structural molecule of the nucleocapsid is often a gag protein homolog.","definition_xrefs":["PMID:10861903","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"retrotransposon nucleocapsid","secondary_identifiers":["Wikipedia:Virus-like_particle"],"synonyms":[{"name":"VLP","type":"exact"},{"name":"Virus-like particle","type":"exact"}],"termid":"GO:0000943"}


id: GO:0002174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mammary stem cell population by cell division. Mammary stem cells are a source of cells for growth of the mammary gland during puberty and gestation. These cells can give rise to both the luminal and myoepithelial cell types of the gland, and can regenerate the entire organ.","definition_xrefs":["PMID:15987436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary stem cell proliferation","termid":"GO:0002174"}


id: PBO:0062944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 2","termid":"PBO:0062944"}


id: GO:0060015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become granulosa cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"granulosa cell differentiation","termid":"GO:0060014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell fate commitment","termid":"GO:0060015"}


id: GO:1902579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A localization which involves another organism.","definition_xrefs":["GOC:jl","GO_REF:0000089","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism localization (obsolete GO:1902579)","synonyms":[{"name":"multi organism localization","type":"exact"}],"termid":"GO:1902579"}


id: GO:0050328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-tetrahydroberberine + 2 O2 = berberine + 2 H2O2.","definition_xrefs":["EC:1.3.3.8","MetaCyc:TETRAHYDROBERBERINE-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tetrahydroberberine oxidase activity","secondary_identifiers":["RHEA:13489"],"synonyms":[{"name":"(S)-THB oxidase activity","type":"related"},{"name":"(S)-tetrahydroberberine:oxygen oxidoreductase activity","type":"related"},{"name":"THB oxidase activity","type":"related"}],"termid":"GO:0050328"}


id: PBO:0091137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L30","termid":"PBO:0091137"}


id: PBO:0017406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, uncharacterized","termid":"PBO:0017406"}


id: GO:0003684
data:
  {"annotated_genes":["SJAG_03734","SJAG_04147","SJAG_01049","SJAG_02556","SJAG_03722","SJAG_02545","SJAG_04778","SJAG_01119","SJAG_00941","SJAG_03855","SJAG_16460","SJAG_00995","SJAG_02334","SJAG_04372","SJAG_04791","SJAG_02828","SJAG_05372","SJAG_02698","SJAG_02079","SJAG_00634","SJAG_05257","SJAG_01887","SJAG_03906","SJAG_02261","SJAG_04410","SJAG_00640","SJAG_04089","SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61761,84213,84327,88201,89028,90658,92238,94253,97662,99005,100106,104243,106962,107090,107390,107568,107702,107885,110447,112430,113321,113499,113769,114942],"is_not":false,"summary":null,"term":"GO:0003684"},{"annotations":[97660,103191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032131"},{"annotations":[103193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140431"},{"annotations":[84214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032132"},{"annotations":[90910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032357"},{"annotations":[91934,111855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990165"}]},"cv_name":"molecular_function","definition":"Binding to damaged DNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00634":null,"SJAG_00640":null,"SJAG_00941":null,"SJAG_00995":null,"SJAG_01049":null,"SJAG_01119":null,"SJAG_01887":null,"SJAG_01971":null,"SJAG_02079":null,"SJAG_02261":null,"SJAG_02334":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02698":null,"SJAG_02828":null,"SJAG_03722":null,"SJAG_03734":null,"SJAG_03855":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04147":null,"SJAG_04372":null,"SJAG_04410":null,"SJAG_04778":null,"SJAG_04791":null,"SJAG_05257":null,"SJAG_05372":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"damaged DNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA repair enzyme","type":"related"},{"name":"DNA repair protein","type":"related"}],"termid":"GO:0003684","terms_by_termid":{"GO:0003684":null,"GO:0032131":null,"GO:0032132":null,"GO:0032357":null,"GO:0140431":null,"GO:1990165":null}}


id: PBO:0052292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 1 like","termid":"PBO:0052292"}


id: GO:0019529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.","definition_xrefs":["GOC:jl","ISBN:0198600461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taurine metabolic process","termid":"GO:0019530"},{"relation_name":"is_a","term_name":"alkanesulfonate catabolic process","termid":"GO:0046306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"taurine catabolic process","secondary_identifiers":["MetaCyc:TAURINEDEG-PWY"],"synonyms":[{"name":"taurine breakdown","type":"exact"},{"name":"taurine catabolism","type":"exact"},{"name":"taurine degradation","type":"exact"}],"termid":"GO:0019529"}


id: PBO:0069814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1100, pseudogene","termid":"PBO:0069814"}


id: PBO:0088287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein But1","termid":"PBO:0088287"}


id: GO:0006465
data:
  {"annotated_genes":["SJAG_02867","SJAG_03648","SJAG_01179","SJAG_01750","SJAG_02809","SJAG_03121","SJAG_04583","SJAG_03737","SJAG_03261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83684,90761,94495,99183,99931,104206,105326,107134,108709],"is_not":false,"summary":null,"term":"GO:0006465"}]},"cv_name":"biological_process","definition":"The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell.","definition_xrefs":["GOC:mah","PMID:31214988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01179":null,"SJAG_01750":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_03121":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03737":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"signal peptide processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"leader peptide processing","type":"exact"}],"termid":"GO:0006465","terms_by_termid":{"GO:0006465":null}}


id: PBO:0074245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 1 like","termid":"PBO:0074245"}


id: PBO:0073776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 9","termid":"PBO:0073776"}


id: PBO:0042547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 11B","termid":"PBO:0042547"}


id: GO:0002290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a gamma-delta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","PMID:8717523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"},{"relation_name":"is_a","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell activation involved in immune response","synonyms":[{"name":"gamma-delta T cell activation during immune response","type":"related"},{"name":"gamma-delta T lymphocyte activation during immune response","type":"related"},{"name":"gamma-delta T-cell activation during immune response","type":"related"},{"name":"gamma-delta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002290"}


id: PBO:0059340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS9 antisense RNA 2","termid":"PBO:0059340"}


id: GO:0032813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the tumor necrosis factor receptor superfamily.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"tumor necrosis factor receptor superfamily binding","synonyms":[{"name":"TNF receptor superfamily binding","type":"exact"}],"termid":"GO:0032813"}


id: PATO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being away from or on the opposite side of the central axis.","definition_xrefs":["medical-dictionary:http://medical-dictionary.thefreedictionary.com/abaxial"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abaxial to","termid":"PATO:0002046"}


id: PBO:0003170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTLH domain","termid":"PBO:0003170"}


id: SO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The variable region of an immunoglobulin polypeptide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_region","termid":"SO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"V_region","synonyms":[{"name":"INSDC_feature:V_region","type":"exact"},{"name":"V region","type":"exact"}],"termid":"SO:0001833"}


id: GO:1905142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apical ectodermal ridge formation.","definition_xrefs":["PMID:18359901","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of apical ectodermal ridge formation","termid":"GO:1905140"},{"relation_name":"positively_regulates","term_name":"apical ectodermal ridge formation","termid":"GO:1905139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apical ectodermal ridge formation","synonyms":[{"name":"activation of AER formation","type":"related"},{"name":"positive regulation of AER formation","type":"related"},{"name":"positive regulation of apical epidermal ridge formation","type":"exact"},{"name":"positive regulation of crista ectodermalis apicalis formation","type":"related"},{"name":"up regulation of AER formation","type":"related"},{"name":"up regulation of apical ectodermal ridge formation","type":"exact"},{"name":"up regulation of apical epidermal ridge formation","type":"exact"},{"name":"up regulation of crista ectodermalis apicalis formation","type":"related"},{"name":"up-regulation of AER formation","type":"related"},{"name":"up-regulation of apical ectodermal ridge formation","type":"exact"},{"name":"up-regulation of apical epidermal ridge formation","type":"exact"},{"name":"up-regulation of crista ectodermalis apicalis formation","type":"related"},{"name":"upregulation of AER formation","type":"related"},{"name":"upregulation of apical ectodermal ridge formation","type":"exact"},{"name":"upregulation of apical epidermal ridge formation","type":"exact"},{"name":"upregulation of crista ectodermalis apicalis formation","type":"related"}],"termid":"GO:1905142"}


id: GO:0106024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of onset of pupariation.","definition_xrefs":["PMID:26510564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of pupariation","termid":"GO:0106023"},{"relation_name":"negatively_regulates","term_name":"pupariation","termid":"GO:0035073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pupariation","termid":"GO:0106024"}


id: FYPO:0002506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein palmitoylation during vegetative growth","synonyms":[{"name":"abnormal protein palmitoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002506"}


id: GO:0052314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytoalexins, any of a range of substances produced by plants as part of their defense response.","definition_xrefs":["Wikipedia:Phytoalexin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"phytoalexin metabolic process","synonyms":[{"name":"phytoalexin metabolism","type":"exact"}],"termid":"GO:0052314"}


id: PBO:0003162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N alpha-acetylation related protein Nat2 (predicted)","termid":"PBO:0003162"}


id: PBO:0005279
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. Pombe Centromere","termid":"PBO:0005279"}


id: FYPO:0004334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah","PMID:22139357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to nucleus during cellular response to hydrogen peroxide","synonyms":[{"name":"increased protein localisation to nucleus during cellular response to hydrogen peroxide","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to H2O2","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleus during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0004334"}


id: PBO:0082011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZSWIM8 antisense RNA 1","termid":"PBO:0082011"}


id: PR:P0CY16
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mat3-Mc gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CY16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced mating-type M-specific polypeptide Mc (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.02","synonyms":[{"name":"Spom972h-mat3-Mc","type":"exact"},{"name":"mat-Mc (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CY16"}


id: PBO:0063952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-5-phosphate 4-kinase type 2 alpha","termid":"PBO:0063952"}


id: PBO:0074841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 34","termid":"PBO:0074841"}


id: PBO:0063430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 4","termid":"PBO:0063430"}


id: PBO:0075301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2","termid":"PBO:0075301"}


id: GO:1900060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a ceramide biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:15302821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sphingolipid biosynthetic process","termid":"GO:0090155"},{"relation_name":"is_a","term_name":"regulation of ceramide biosynthetic process","termid":"GO:2000303"},{"relation_name":"negatively_regulates","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ceramide biosynthetic process","synonyms":[{"name":"down regulation of ceramide anabolism","type":"exact"},{"name":"down regulation of ceramide biosynthesis","type":"exact"},{"name":"down regulation of ceramide biosynthetic process","type":"related"},{"name":"down regulation of ceramide formation","type":"exact"},{"name":"down regulation of ceramide synthesis","type":"exact"},{"name":"down-regulation of ceramide anabolism","type":"exact"},{"name":"down-regulation of ceramide biosynthesis","type":"exact"},{"name":"down-regulation of ceramide biosynthetic process","type":"related"},{"name":"down-regulation of ceramide formation","type":"exact"},{"name":"down-regulation of ceramide synthesis","type":"exact"},{"name":"downregulation of ceramide anabolism","type":"exact"},{"name":"downregulation of ceramide biosynthesis","type":"exact"},{"name":"downregulation of ceramide biosynthetic process","type":"related"},{"name":"downregulation of ceramide formation","type":"exact"},{"name":"downregulation of ceramide synthesis","type":"exact"},{"name":"inhibition of ceramide anabolism","type":"exact"},{"name":"inhibition of ceramide biosynthesis","type":"exact"},{"name":"inhibition of ceramide biosynthetic process","type":"related"},{"name":"inhibition of ceramide formation","type":"exact"},{"name":"inhibition of ceramide synthesis","type":"exact"},{"name":"negative regulation of ceramide anabolism","type":"exact"},{"name":"negative regulation of ceramide biosynthesis","type":"exact"},{"name":"negative regulation of ceramide formation","type":"exact"},{"name":"negative regulation of ceramide synthesis","type":"exact"}],"termid":"GO:1900060"}


id: FYPO:0006312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-3'-diphospho-5'-guanosine diphosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA-3'-diphospho-5'-guanosine diphosphatase activity","termid":"FYPO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA-3'-diphospho-5'-guanosine diphosphatase activity","synonyms":[{"name":"reduced DNA-3'-diphospho-5'-guanosine diphosphatase activity","type":"exact"}],"termid":"FYPO:0006312"}


id: FYPO:0003080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished genetic imprinting at mating-type locus","synonyms":[{"name":"abolished genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"genetic imprinting at mating-type locus abolished","type":"exact"},{"name":"genetic imprinting at mating-type locus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003080"}


id: PBO:0072061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 31","termid":"PBO:0072061"}


id: FYPO:0007918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA 3' end processing is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}


id: FYPO:0006826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4-fluorophenylalanine. Cells stop growing (and may die) at a concentration of 4-fluorophenylalanine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to 4-fluorophenylalanine","synonyms":[{"name":"hypersensitive to 4-fluorophenylalanine","type":"exact"},{"name":"sensitive to 4-fluorophenylalanine during mitotic cell cycle","type":"related"},{"name":"sensitive to 4-fluorophenylalanine during vegetative growth","type":"exact"},{"name":"sensitive to p-fluoro-phenylalanine","type":"exact"},{"name":"sensitive to p-fluorophenylalanine","type":"exact"}],"termid":"FYPO:0006826"}


id: PBO:0066301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 3","termid":"PBO:0066301"}


id: PBO:0039325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase pseudogene 2","termid":"PBO:0039325"}


id: PBO:0058126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4428","termid":"PBO:0058126"}


id: SO:0000577
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of chromosome where the spindle fibers attach during mitosis and meiosis.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere","secondary_identifiers":["http://en.wikipedia.org/wiki/Centromere"],"synonyms":[{"name":"INSDC_feature:centromere","type":"exact"}],"termid":"SO:0000577"}


id: PBO:0061444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NR2F2 antisense RNA 1","termid":"PBO:0061444"}


id: GO:1900066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ethanol catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:10608811","PMID:7760841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ethanol catabolic process","termid":"GO:1900065"},{"relation_name":"is_a","term_name":"positive regulation of cellular alcohol catabolic process","termid":"GO:1900421"},{"relation_name":"positively_regulates","term_name":"ethanol catabolic process","termid":"GO:0006068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ethanol catabolic process","synonyms":[{"name":"activation of ethanol breakdown","type":"narrow"},{"name":"activation of ethanol catabolic process","type":"narrow"},{"name":"activation of ethanol catabolism","type":"narrow"},{"name":"activation of ethanol degradation","type":"narrow"},{"name":"positive regulation of ethanol breakdown","type":"exact"},{"name":"positive regulation of ethanol catabolism","type":"exact"},{"name":"positive regulation of ethanol degradation","type":"exact"},{"name":"up regulation of ethanol breakdown","type":"exact"},{"name":"up regulation of ethanol catabolic process","type":"related"},{"name":"up regulation of ethanol catabolism","type":"exact"},{"name":"up regulation of ethanol degradation","type":"exact"},{"name":"up-regulation of ethanol breakdown","type":"exact"},{"name":"up-regulation of ethanol catabolic process","type":"related"},{"name":"up-regulation of ethanol catabolism","type":"exact"},{"name":"up-regulation of ethanol degradation","type":"exact"},{"name":"upregulation of ethanol breakdown","type":"exact"},{"name":"upregulation of ethanol catabolic process","type":"related"},{"name":"upregulation of ethanol catabolism","type":"exact"},{"name":"upregulation of ethanol degradation","type":"exact"}],"termid":"GO:1900066"}


id: PBO:0113754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu18, C2 domain","termid":"PBO:0113754"}


id: PBO:0061606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleobindin 2","termid":"PBO:0061606"}


id: FYPO:0003456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize methionine or purines, and therefore requires methionine and at least one purine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for methionine","termid":"FYPO:0000040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for methionine and purine","synonyms":[{"name":"growth auxotrophic for methionine and purine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for methionine and purine during vegetative growth","type":"exact"},{"name":"methionine and purine auxotrophy","type":"exact"}],"termid":"FYPO:0003456"}


id: GO:0106026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Gly-tRNA(Ala).","definition_xrefs":["PMID:28362257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0140101","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"Gly-tRNA(Ala) hydrolase activity","termid":"GO:0106026"}


id: PBO:0046472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERBIN divergent transcript","termid":"PBO:0046472"}


id: PBO:0028782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transposable_element-derived_small_RNA_level","termid":"PBO:0028782"}


id: GO:0030247
data:
  {"annotated_genes":["SJAG_00981","SJAG_00667","SJAG_03535"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96233],"is_not":false,"summary":null,"term":"GO:0030247"},{"annotations":[91759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030248"},{"annotations":[114693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001065"}]},"cv_name":"molecular_function","definition":"Binding to a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_00981":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"polysaccharide binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0002506"],"synonyms":[{"name":"polysaccharide assembly with MHC class II protein complex","type":"narrow"}],"termid":"GO:0030247","terms_by_termid":{"GO:0030247":null,"GO:0030248":null,"GO:2001065":null}}


id: GO:0160091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of circular RNAs (circRNAs) by back-splicing circularization of pre-mRNAs in a spliceosome-dependent process.","definition_xrefs":["PMID:25768908","PMID:28625552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"spliceosome-depend formation of circular RNA","termid":"GO:0160091"}


id: PBO:0109310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of numb-protein X 2B, pseudogene","termid":"PBO:0109310"}


id: GO:0060720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of spongiotrophoblast cells, resulting in the expansion of the population in the spongiotrophoblast layer.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in embryonic placenta development","termid":"GO:0060722"},{"relation_name":"part_of","term_name":"spongiotrophoblast layer developmental growth","termid":"GO:0090214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spongiotrophoblast cell proliferation","termid":"GO:0060720"}


id: GO:0009770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Energized reaction-center P700 chlorophylls on photosystem I donate an electron to a loosely bound Quinone acceptor molecule X, on the stromal surface of the thylakoid membrane. The result is charge separation; a negative charge on the stromal side of the thylakoid membrane and a positive charge on the luminal side.","definition_xrefs":["GOC:jid","ISBN:0716731363","ISBN:0816017360"],"gene_count":0,"genotype_count":0,"name":"obsolete primary charge separation in photosystem I (obsolete GO:0009770)","termid":"GO:0009770"}


id: PBO:0044710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 10 pseudogene 1","termid":"PBO:0044710"}


id: PBO:0072659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 1","termid":"PBO:0072659"}


id: PBO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase","termid":"PBO:0001460"}


id: PBO:0045734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F associated phosphoprotein","termid":"PBO:0045734"}


id: GO:0050344
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cinnamate + H+ + NADPH + O2 = 2-coumarate + H2O + NADP+.","definition_xrefs":["EC:1.14.13.14","RHEA:10956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"trans-cinnamate 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02254","MetaCyc:TRANS-CINNAMATE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"cinnamate 2-hydroxylase activity","type":"related"},{"name":"cinnamate 2-monooxygenase activity","type":"related"},{"name":"cinnamic 2-hydroxylase activity","type":"related"},{"name":"cinnamic acid 2-hydroxylase activity","type":"related"},{"name":"trans-cinnamate,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"trans-cinnamic acid 2-hydroxylase activity","type":"exact"}],"termid":"GO:0050344"}


id: PR:O74984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC338.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein homolog C338.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.06c","synonyms":[{"name":"Spom972h-SPCC338.06c","type":"exact"}],"termid":"PR:O74984"}


id: PBO:0072577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 homolog, RNA polymerase I transcription factor","termid":"PBO:0072577"}


id: GO:0050172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + O2 = 2-phenylacetamide + CO2 + H2O.","definition_xrefs":["RHEA:10712","EC:1.13.12.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenylalanine 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00690","MetaCyc:PHENYLALANINE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"L-phenylalanine oxidase (deaminating and decarboxylating)","type":"related"},{"name":"L-phenylalanine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"l-phenylalanine oxidase (deaminating and decarboxylating) activity","type":"related"},{"name":"phenylalanine (deaminating, decarboxylating) oxidase activity","type":"related"},{"name":"phenylalanine (deaminating, decarboxylating)oxidase activity","type":"related"}],"termid":"GO:0050172"}


id: GO:0060548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell death (obsolete GO:0060548)","termid":"GO:0060548"}


id: PBO:0028355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatase_activity","termid":"PBO:0028355"}


id: GO:0045823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heart contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"is_a","term_name":"positive regulation of blood circulation","termid":"GO:1903524"},{"relation_name":"positively_regulates","term_name":"heart contraction","termid":"GO:0060047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart contraction","synonyms":[{"name":"activation of heart contraction","type":"narrow"},{"name":"positive regulation of cardiac contraction","type":"exact"},{"name":"stimulation of heart contraction","type":"narrow"},{"name":"up regulation of heart contraction","type":"exact"},{"name":"up-regulation of heart contraction","type":"exact"},{"name":"upregulation of heart contraction","type":"exact"}],"termid":"GO:0045823"}


id: PBO:0058958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 2","termid":"PBO:0058958"}


id: PBO:0066206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 20","termid":"PBO:0066206"}


id: PBO:0081278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 45","termid":"PBO:0081278"}


id: PBO:0059814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 40","termid":"PBO:0059814"}


id: GO:0018880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-chlorobiphenyl, a member of the polychlorinated biphenyl (PCB) group of compounds, a very stable group of synthetic organic compounds composed of a biphenyl nucleus with 1-10 chlorine substituents. 4-chlorobiphenyl has been used as a model substrate to investigate PCB degradation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"4-chlorobiphenyl metabolic process","secondary_identifiers":["UM-BBD_pathwayID:cbp"],"synonyms":[{"name":"4-chlorobiphenyl metabolism","type":"exact"}],"termid":"GO:0018880"}


id: GO:0043558
data:
  {"annotated_genes":["SJAG_00690","SJAG_02072","SJAG_04873","SJAG_03869","SJAG_04383","SJAG_00169","SJAG_00786","SJAG_02592","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88840,95414,111777,90408,88537,105808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[100077,91270,99434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of translation initiation in response to stress","type":"exact"}],"termid":"GO:0043558","terms_by_termid":{"GO:1990611":null,"GO:1990625":null}}


id: PBO:0031907
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia","termid":"PBO:0031907"}


id: GO:0007516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hemocyte over time, from its formation to the mature structure. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte development","synonyms":[{"name":"arthropod blood cell development","type":"exact"}],"termid":"GO:0007516"}


id: PBO:0040937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 8","termid":"PBO:0040937"}


id: MOD:00494
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:12185208","Unimod:123#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-iodoacetyl, p-chlorobenzyl-12C6-glucamine","synonyms":[{"name":"ICAT-H","type":"related"},{"name":"N-iodoacetyl, p-chlorobenzyl-12C6-glucamine","type":"related"}],"termid":"MOD:00494"}


id: PBO:0060360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoferlin","termid":"PBO:0060360"}


id: PBO:0064212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLBD1 antisense RNA 1","termid":"PBO:0064212"}


id: GO:0045828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving isoprenoid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"positively_regulates","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of isoprenoid metabolic process","synonyms":[{"name":"activation of isoprenoid metabolic process","type":"narrow"},{"name":"positive regulation of isoprenoid metabolism","type":"exact"},{"name":"stimulation of isoprenoid metabolic process","type":"narrow"},{"name":"up regulation of isoprenoid metabolic process","type":"exact"},{"name":"up-regulation of isoprenoid metabolic process","type":"exact"},{"name":"upregulation of isoprenoid metabolic process","type":"exact"}],"termid":"GO:0045828"}


id: GO:1901920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any peptidyl-tyrosine dephosphorylation that is involved in activation of protein kinase activity.","definition_xrefs":["GOC:TermGenie","PMID:1756737"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tyrosine dephosphorylation involved in activation of protein kinase activity (obsolete GO:1901920)","synonyms":[{"name":"peptidyl-tyrosine dephosphorylation involved in protein kinase activation","type":"related"}],"termid":"GO:1901920"}


id: GO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response driven by antigen recognition by antibodies bound to Fc receptors basophils, occurring within minutes after exposure of a sensitized individual to the antigen, and leading to the release of a variety of inflammatory mediators such as histamines.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basophil mediated immunity","termid":"GO:0002560"},{"relation_name":"is_a","term_name":"type I hypersensitivity","termid":"GO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type I hypersensitivity mediated by basophils","termid":"GO:0002559"}


id: GO:0034684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphav subunit and one beta5 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"integrin alphav-beta5 complex","synonyms":[{"name":"ITGAV-ITGB5 complex","type":"narrow"},{"name":"alphav-beta5 integrin complex","type":"exact"}],"termid":"GO:0034684"}


id: GO:0070306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lens fiber cell, any of the elongated, tightly packed cells that make up the bulk of the mature lens in the camera-type eye. The cytoplasm of a lens fiber cell is devoid of most intracellular organelles including the cell nucleus, and contains primarily crystallins, a group of water-soluble proteins expressed in vary large quantities.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"lens development in camera-type eye","termid":"GO:0002088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell differentiation","synonyms":[{"name":"lens fibre cell differentiation","type":"exact"}],"termid":"GO:0070306"}


id: FYPO:0005696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from the interphase microtubule organizing center does not occur. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cytoplasmic interphase microtubule nucleation","termid":"FYPO:0004766"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule nucleation from iMTOC","synonyms":[{"name":"abolished cytoplasmic interphase microtubule nucleation from iMTOC","type":"exact"},{"name":"abolished cytoplasmic microtubule nucleation from iMTOC during mitotic interphase","type":"exact"},{"name":"abolished interphase cytoplasmic microtubule nucleation from iMTOC","type":"exact"},{"name":"abolished interphase microtubule nucleation from iMTOC during mitotic cell cycle","type":"exact"},{"name":"abolished interphase microtubule nucleation from iMTOC during vegetative growth","type":"exact"},{"name":"abolished microtubule nucleation from interphase microtubule organizing center","type":"exact"},{"name":"abolished microtubule nucleation from interphase microtubule organizing centre","type":"exact"},{"name":"cytoplasmic microtubule nucleation from iMTOC abolished","type":"exact"}],"termid":"FYPO:0005696"}


id: GO:0097190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals which triggers the apoptotic death of a cell. The pathway starts with reception of a signal, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"apoptotic signaling pathway","secondary_identifiers":["GO:0008624"],"synonyms":[{"name":"apoptotic signalling pathway","type":"exact"},{"name":"induction of apoptosis by extracellular signals","type":"exact"}],"termid":"GO:0097190"}


id: PBO:0017573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc6 (predicted)","termid":"PBO:0017573"}


id: MOD:00303
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts seven L-histidinine residues and a four-copper one-sulfur one-hydroxide cluster to heptakis-L-histidino tetracopper mu4-sulfide hydroxide.","definition_xrefs":["PubMed:11041839","RESID:AA0298","PubMed:11024061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heptakis-L-histidino tetracopper mu4-sulfide hydroxide","synonyms":[{"name":"heptakis-L-histidino tetracopper mu4-sulfide hydroxide","type":"exact"},{"name":"mu4-sulfido bis(bis-N1'-histidino copper)(N1'-histidino-N3'-histidino copper)(N3'-histidino hydroxide copper)","type":"exact"},{"name":"nitrous oxide reductase nosZ CuZ cluster","type":"exact"},{"name":"pentakis-L-N1'-histidino-bis-L-N3'-histidino tetracopper sulfide hydroxide","type":"exact"}],"termid":"MOD:00303"}


id: SO:0001451
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A positively charged, hydorophilic amino acid encoded by the codons CGN (CGT, CGC, CGA and CGG), AGA and AGG.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine","synonyms":[{"name":"Arg","type":"exact"},{"name":"R","type":"exact"}],"termid":"SO:0001451"}


id: PBO:0017876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine aminotransferase Rhp1602 (predicted)","termid":"PBO:0017876"}


id: GO:0002238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octamer oligosaccharide.","definition_xrefs":["GOC:sm","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external biotic stimulus","termid":"GO:0043207"},{"relation_name":"part_of","term_name":"response to fungus","termid":"GO:0009620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to molecule of fungal origin","synonyms":[{"name":"response to fungus associated molecule","type":"exact"}],"termid":"GO:0002238"}


id: GO:0102720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + benzyl alcohol = benzyl acetate + CoA. Also converts (E)-cinnamyl alcohol into (E)-cinnamyl acetate.","definition_xrefs":["EC:2.3.1.224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetyl-coenzyme A:acetyl alcohol acetyltransferase activity","termid":"GO:0102720"}


id: GO:0097686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A horn-shaped dinoflagellate apex found in thecate species.","definition_xrefs":["GOC:at","PMID:7002229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinoflagellate apex","termid":"GO:0097683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate apical horn","termid":"GO:0097686"}


id: GO:0019292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-tyrosine from other compounds, including chorismate, via the intermediate 4-hydroxyphenylpyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate","secondary_identifiers":["MetaCyc:TYRSYN"],"synonyms":[{"name":"L-tyrosine anabolism from chorismate via 4-hydroxyphenylpyruvate","type":"exact"},{"name":"L-tyrosine biosynthetic process from chorismate via p-hydroxyphenylpyruvate","type":"exact"},{"name":"L-tyrosine formation from chorismate via 4-hydroxyphenylpyruvate","type":"exact"},{"name":"L-tyrosine synthesis from chorismate via 4-hydroxyphenylpyruvate","type":"exact"},{"name":"tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate","type":"broad"}],"termid":"GO:0019292"}


id: GO:1905751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endosome to plasma membrane protein transport.","definition_xrefs":["GOC:TermGenie","PMID:22869721","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"is_a","term_name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"},{"relation_name":"is_a","term_name":"positive regulation of endocytic recycling","termid":"GO:2001137"},{"relation_name":"positively_regulates","term_name":"endosome to plasma membrane protein transport","termid":"GO:0099638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endosome to plasma membrane protein transport","synonyms":[{"name":"activation of endosome to plasma membrane protein transport","type":"narrow"},{"name":"up regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"up-regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"upregulation of endosome to plasma membrane protein transport","type":"exact"}],"termid":"GO:1905751"}


id: GO:1900015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytokine production involved in inflammatory response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"cytokine production involved in inflammatory response","termid":"GO:0002534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of cytokine production involved in inflammatory response","synonyms":[{"name":"regulation of cytokine production involved in acute inflammatory response","type":"narrow"}],"termid":"GO:1900015"}


id: GO:0010067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the primary vascular tissue.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"procambium histogenesis","termid":"GO:0010067"}


id: PBO:0000998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid reductase (predicted)","termid":"PBO:0000998"}


id: GO:0007191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by dopamine binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating dopamine receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"activation of adenylate cyclase activity by dopamine receptor signalling pathway","type":"related"},{"name":"dopamine receptor, adenylate cyclase activating pathway","type":"exact"},{"name":"dopamine receptor, adenylyl cyclase activating pathway","type":"exact"}],"termid":"GO:0007191"}


id: PBO:0072204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 3","termid":"PBO:0072204"}


id: PBO:0003916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2B subunit","termid":"PBO:0003916"}


id: PBO:0071923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4 X-linked","termid":"PBO:0071923"}


id: SO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U14 small nucleolar RNA (U14 snoRNA) is required for early cleavages of eukaryotic precursor rRNAs. In yeasts, this molecule possess a stem-loop region (known as the Y-domain) which is essential for function. A similar structure, but with a different consensus sequence, is found in plants, but is absent in vertebrates.","definition_xrefs":["PMID:2551119"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"U14_snoRNA_primary_transcript","termid":"SO:0005837"},{"relation_name":"is_a","term_name":"C_D_box_snoRNA","termid":"SO:0000593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U14_snoRNA","secondary_identifiers":["SO:0005839"],"synonyms":[{"name":"U14 small nucleolar RNA","type":"exact"},{"name":"U14 snoRNA","type":"exact"},{"name":"small nucleolar RNA U14","type":"exact"},{"name":"snoRNA U14","type":"exact"}],"termid":"SO:0000403"}


id: PBO:0079256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 28","termid":"PBO:0079256"}


id: PBO:0054097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1450","termid":"PBO:0054097"}


id: MOD:00107
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to L-tryptophan amide.","definition_xrefs":["PubMed:3947348","RESID:AA0098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tryptophan amide","synonyms":[{"name":"(2S)-2-amino-3-(1H-indol-3-yl)propanamide","type":"exact"},{"name":"L-tryptophan amide","type":"exact"},{"name":"MOD_RES Tryptophan amide","type":"exact"},{"name":"TrpN","type":"exact"},{"name":"amidated L-tryptophan","type":"exact"},{"name":"tryptophanamide","type":"exact"}],"termid":"MOD:00107"}


id: PBO:0042155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 16","termid":"PBO:0042155"}


id: PBO:0003634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta subunit Git5","termid":"PBO:0003634"}


id: GO:0031570
data:
  {"annotated_genes":["SJAG_01205","SJAG_01146","SJAG_01708","SJAG_02563","SJAG_01873","SJAG_01855","SJAG_00640","SJAG_04671","SJAG_02074","SJAG_02026","SJAG_01429","SJAG_02266","SJAG_03026","SJAG_03898","SJAG_04332","SJAG_00169","SJAG_03048","SJAG_00486","SJAG_05373","SJAG_04140","SJAG_03160","SJAG_03927","SJAG_00429","SJAG_01010","SJAG_01677","SJAG_01605","SJAG_03695","SJAG_03942","SJAG_00364","SJAG_02771","SJAG_04280","SJAG_03720","SJAG_01044","SJAG_02576","SJAG_04287","SJAG_01084","SJAG_01076","SJAG_00623","SJAG_01680","SJAG_02098","SJAG_00327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000077"},{"annotations":[88549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[102726,112228,87452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[105446,102728,110417,112172,112404,95268,87814,107339,78754,89600,89980,98453,110622,113890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[112980,103964,113280,87453,105447,102729,108182,95269,113449,112230,95437,99426,89981,88550,90004,85152,96619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[87330,105806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[110418,97135,107877,113195,95438,102730,86241,85153,87454,105448,89983,96620,87815,84581,113891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[84582,85200,108184,86472,88551,96940,95439,103795,112231,85154,102731,98455,90583,95270,113281,97606,112232,87455,92066,107878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signaling process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and progresses through signal transduction and ends with cell cycle effector processes.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072401"],"synonyms":[{"name":"DNA integrity checkpoint","type":"exact"},{"name":"signal transduction involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:0031570","terms_by_termid":{"GO:0000077":null,"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0033315":null,"GO:0044773":null,"GO:0044778":null}}


id: PBO:0043922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 1","termid":"PBO:0043922"}


id: GO:0102407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: C22:0-DCA-CoA + sn-glycerol 3-phosphate = coenzyme A + 2-C22:0-DCA-LPA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate C22:0-DCA-CoA acyl transferase activity (obsolete GO:0102407)","termid":"GO:0102407"}


id: PBO:0081265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF32 antisense RNA 3","termid":"PBO:0081265"}


id: PBO:0075313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5 pseudogene 5","termid":"PBO:0075313"}


id: PBO:0078610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64","termid":"PBO:0078610"}


id: GO:2000815
data:
  {"annotated_genes":["SJAG_03886","SJAG_05014","SJAG_02573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85832,86224,87546],"is_not":false,"summary":null,"term":"GO:2000815"}]},"cv_name":"biological_process","definition":"A process of regulation of mRNA stability that is involved in a response to oxidative stress.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability involved in response to stress","termid":"GO:0010610"},{"relation_name":"part_of","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02573":null,"SJAG_03886":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA stability involved in response to oxidative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000815","terms_by_termid":{"GO:2000815":null}}


id: PBO:0069817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1103, pseudogene","termid":"PBO:0069817"}


id: PBO:0076108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 16","termid":"PBO:0076108"}


id: GO:0043476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of coloring matter in a particular location in an organism, tissue or cell, occurring in response to some external stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment accumulation","synonyms":[{"name":"pigment accumulation in response to external stimulus","type":"exact"}],"termid":"GO:0043476"}


id: PBO:0055580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3016","termid":"PBO:0055580"}


id: PBO:0091552
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleterious Haploid Meiosis","termid":"PBO:0091552"}


id: GO:0009035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to give random double-stranded fragments with terminal 5' or 3' protrusions, driven by ATP hydrolysis. Cleavage is dependent on the presence in the DNA of a specific recognition site. Cleavage may occur hundreds or thousands of base pairs away from the recognition site due to translocation of DNA.","definition_xrefs":["PMID:15788748","PMID:15300241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA translocase activity","termid":"GO:0015616"},{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"},{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0140097","GO:0016788"],"is_obsolete":false,"name":"type I site-specific deoxyribonuclease activity","secondary_identifiers":["EC:3.1.21.3","MetaCyc:3.1.21.3-RXN"],"synonyms":[{"name":"ATP-dependent DNase activity","type":"related"},{"name":"adenosine triphosphate-dependent deoxyribonuclease activity","type":"related"},{"name":"deoxyribonuclease (ATP- and S-adenosyl-L-methionine-dependent)","type":"related"},{"name":"deoxyribonuclease (adenosine triphosphate-hydrolyzing)","type":"related"},{"name":"type I restriction enzyme activity","type":"exact"}],"termid":"GO:0009035"}


