# terms

id: GO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a collectin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:add","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"collectin receptor activity","termid":"GO:0001863"}


id: GO:0071810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of fever generation via regulation of the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fever generation","termid":"GO:0031620"},{"relation_name":"is_a","term_name":"regulation of prostaglandin secretion","termid":"GO:0032306"},{"relation_name":"regulates","term_name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of fever generation by regulation of prostaglandin secretion","termid":"GO:0071810"}


id: PBO:0063959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 gamma","termid":"PBO:0063959"}


id: SO:1000080
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000080 sequence_variant_increasing_rate_of_transcription (obsolete SO:1000080)","synonyms":[{"name":"mutation increasing rate of transcription","type":"related"},{"name":"sequence variation increasing rate of transcription","type":"exact"}],"termid":"SO:1000080"}


id: PBO:0086661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified as interacting with Hsp82p in a high-throughput two-hybrid screen; YOR097C is not an essential gene","termid":"PBO:0086661"}


id: GO:0016626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an acceptor other than NAD, NADP, oxygen, an iron-sulfur protein, disulphide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors (obsolete GO:0016626)","synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors","type":"exact"}],"termid":"GO:0016626"}


id: PBO:0017086
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously incorrectly annotated as the ortholog Sae2p","termid":"PBO:0017086"}


id: FYPO:0005592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lysophosphatidylethanolamine level measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular lysophosphatidylethanolamine level","synonyms":[{"name":"decreased cellular lysophosphatidylethanolamine level during vegetative growth","type":"exact"},{"name":"decreased lysophosphatidylethanolamine accumulation","type":"related"},{"name":"reduced cellular lysophosphatidylethanolamine level","type":"exact"}],"termid":"FYPO:0005592"}


id: PR:Q9HE15
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1399.04c gene.","definition_xrefs":["UniProtKB:Q9HE15","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.04c","synonyms":[{"name":"Spom972h-SPAC1399.04c","type":"exact"},{"name":"UMP pyrophosphorylase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE15"}


id: GO:1900506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iron-sulfur-molybdenum cofactor assembly.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"},{"relation_name":"regulates","term_name":"iron-sulfur-molybdenum cofactor assembly","termid":"GO:0044593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0016226"],"is_obsolete":false,"name":"regulation of iron-sulfur-molybdenum cofactor assembly","synonyms":[{"name":"regulation of FeMoco assembly","type":"exact"},{"name":"regulation of FeMoco biosynthetic process","type":"exact"},{"name":"regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"regulation of iron molybdenum cofactor biosynthetic process","type":"exact"}],"termid":"GO:1900506"}


id: GO:0018394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-lysine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine acetylation","termid":"GO:0018394"}


id: PR:Q9P6I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6I1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.09","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc16","type":"exact"},{"name":"ubiquitin carrier protein 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I1"}


id: GO:0047805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP = 3',5'-cyclic CMP + diphosphate + H+.","definition_xrefs":["RHEA:14737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829","GO:0009975"],"is_obsolete":false,"name":"cytidylate cyclase activity","secondary_identifiers":["EC:4.6.1.6","KEGG_REACTION:R00574","MetaCyc:CYTIDYLATE-CYCLASE-RXN"],"synonyms":[{"name":"3',5'-cyclic-CMP synthase activity","type":"related"},{"name":"3'5'-cyclic-CMP synthase activity","type":"related"},{"name":"CTP diphosphate-lyase (cyclizing)","type":"related"},{"name":"CTP diphosphate-lyase (cyclizing; 3',5'-cyclic-CMP-forming)","type":"related"},{"name":"cytidyl cyclase activity","type":"related"},{"name":"cytidylyl cyclase activity","type":"related"}],"termid":"GO:0047805"}


id: PBO:0088841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin Phb2","termid":"PBO:0088841"}


id: PR:000027552
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 that has been post-translationally modified to include at least one phosphorylated residue.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2","termid":"PR:000027545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.2 phosphorylated form","synonyms":[{"name":"HTA2/PhosRes+","type":"exact"}],"termid":"PR:000027552"}


id: MOD:00159
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-phosphopantetheine-L-serine.","definition_xrefs":["PubMed:12869567","PubMed:10320345","PubMed:4568609","Unimod:49#S","DeltaMass:0","PubMed:12057197","PubMed:10997907","RESID:AA0150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-phosphopantetheine-L-serine","synonyms":[{"name":"(2R)-2-hydroxy-3,3-dimethyl-4-[(2S)-2-amino-2-carboxyethyl]phosphonato-N-(3-oxo-3-[(2-sulfanylethyl)amino]propyl)butanamide","type":"exact"},{"name":"4'-Phosphopantetheine","type":"exact"},{"name":"MOD_RES O-(pantetheine 4'-phosphoryl)serine","type":"exact"},{"name":"O-phosphopantetheine-L-serine","type":"exact"},{"name":"OPpantSer","type":"exact"},{"name":"Phosphopantetheine","type":"related"}],"termid":"MOD:00159"}


id: GO:0032453
data:
  {"annotated_genes":["SJAG_01465","SJAG_03635","SJAG_03286"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83431],"is_not":false,"summary":null,"term":"GO:0032453"},{"annotations":[92718,109218,83432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 4 of the histone H3 protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0032452"],"is_obsolete":false,"name":"histone H3K4 demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9822461","Reactome:R-HSA-9822467"],"synonyms":[{"name":"histone H3-K4 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-4 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"histone demethylase activity (H3K4-specific)","type":"exact"}],"termid":"GO:0032453","terms_by_termid":{"GO:0032453":null,"GO:0034647":null}}


id: PBO:0062885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OVCH1 antisense RNA 1","termid":"PBO:0062885"}


id: GO:0042993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription factor import into nucleus (obsolete GO:0042993)","synonyms":[{"name":"activation of transcription factor import into nucleus","type":"narrow"},{"name":"positive regulation of transcription factor import into cell nucleus","type":"exact"},{"name":"positive regulation of transcription factor transport from cytoplasm to nucleus","type":"exact"},{"name":"positive regulation of transcription factor-nucleus import","type":"exact"},{"name":"stimulation of transcription factor import into nucleus","type":"narrow"},{"name":"up regulation of transcription factor import into nucleus","type":"exact"},{"name":"up-regulation of transcription factor import into nucleus","type":"exact"},{"name":"upregulation of transcription factor import into nucleus","type":"exact"}],"termid":"GO:0042993"}


id: GO:0004196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the degradation of gelatin; little activity on hemoglobin. Specificity on B chain of insulin more restricted than pepsin A; does not cleave Phe1-Val2, Gln4-His5 or Gly23-Phe24.","definition_xrefs":["EC:3.4.23.25"],"gene_count":0,"genotype_count":0,"name":"obsolete saccharopepsin activity (obsolete GO:0004196)","synonyms":[{"name":"PRA","type":"related"},{"name":"Saccharomyces aspartic proteinase activity","type":"narrow"},{"name":"aspartic proteinase yscA","type":"related"},{"name":"proteinase A","type":"related"},{"name":"proteinase yscA","type":"related"},{"name":"saccharomyces aspartic proteinase activity","type":"related"},{"name":"saccharomyces cerevisiae aspartic proteinase A","type":"related"},{"name":"saccharopepsin activity","type":"exact"},{"name":"yeast endopeptidase A activity","type":"narrow"},{"name":"yeast proteinase A","type":"related"}],"termid":"GO:0004196"}


id: GO:0045769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asymmetric cell division","termid":"GO:0009786"},{"relation_name":"is_a","term_name":"negative regulation of cell division","termid":"GO:0051782"},{"relation_name":"negatively_regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asymmetric cell division","synonyms":[{"name":"down regulation of asymmetric cell division","type":"exact"},{"name":"down-regulation of asymmetric cell division","type":"exact"},{"name":"downregulation of asymmetric cell division","type":"exact"},{"name":"inhibition of asymmetric cell division","type":"narrow"}],"termid":"GO:0045769"}


id: GO:0034924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-3,4-phenanthrenedihydrodiol-4-carboxylate = 3,4-dihydroxyphenanthrene + H+ + 2 e- + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-3,4-phenanthrenedihydrodiol-4-carboxylate dehydrogenase activity (obsolete GO:0034924)","termid":"GO:0034924"}


id: PBO:0000885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2' O-ribose methyltransferase Mrm2-like (predicted)","termid":"PBO:0000885"}


id: PBO:0088342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A scaffold subunit Paa1","termid":"PBO:0088342"}


id: GO:0097197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pre-organized unit composed either of adhesion molecules (mainly integrins and members of the Ig superfamily), signaling receptors and/or enzyme-enriched plasma membrane domains that compartmentalizes cellular processes. Tetraspanin-enriched microdomains might be specially suited for the regulation of avidity of adhesion receptors and the compartmentalization of enzymatic activities.","definition_xrefs":["GOC:ans","PMID:19709882","PMID:21930792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"tetraspanin-enriched microdomain","synonyms":[{"name":"TEM","type":"exact"},{"name":"membrane tetraspanin-enriched microdomain","type":"exact"}],"termid":"GO:0097197"}


id: GO:0140892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction chloride(in) + 2 hydrogencarbonate(out) + Na+(out) = chloride(out) + 2 hydrogencarbonate(in) + Na+(in).","definition_xrefs":["PMID:8189393","PMID:20389022","PMID:18577713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"},{"relation_name":"is_a","term_name":"chloride:bicarbonate antiporter activity","termid":"GO:0140900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium,bicarbonate:chloride antiporter activity","secondary_identifiers":["TC:2.A.31.2.4"],"synonyms":[{"name":"sodium,hydrogencarbonate:chloride antiporter activity","type":"exact"},{"name":"sodium-dependent chloride/bicarbonate exchanger activity","type":"exact"}],"termid":"GO:0140892"}


id: PBO:0026660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_inositol_starvation","termid":"PBO:0026660"}


id: PBO:0061314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPHS1 adhesion molecule, nephrin","termid":"PBO:0061314"}


id: PBO:0027344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_primase_activity","termid":"PBO:0027344"}


id: PBO:0045314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-deoxynucleoside 5'-phosphate N-hydrolase 1","termid":"PBO:0045314"}


id: GO:0047200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydrodipicolinate + acetyl-CoA + H2O = L-2-acetamido-6-oxopimelate + CoA.","definition_xrefs":["RHEA:13085","EC:2.3.1.89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"tetrahydrodipicolinate N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04364","MetaCyc:2.3.1.89-RXN"],"synonyms":[{"name":"acetyl-CoA:(S)-2,3,4,5-tetrahydrodipicolinate-2,6-dicarboxylate N2-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:(S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate 2-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-2,3,4,5-tetrahydrodipicolinate N2-acetyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate acetylase activity","type":"related"},{"name":"tetrahydrodipicolinate:acetyl-CoA acetyltransferase activity","type":"related"}],"termid":"GO:0047200"}


id: PBO:0052098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 1","termid":"PBO:0052098"}


id: PBO:0036000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_medial_cortical_node_condensation","termid":"PBO:0036000"}


id: GO:0033327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis.","definition_xrefs":["PMID:12050120","GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Leydig cell differentiation","termid":"GO:0033327"}


id: PR:P36607
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad8 gene.","definition_xrefs":["UniProtKB:P36607","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.01c","synonyms":[{"name":"DNA repair protein RAD5 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad8","type":"exact"}],"termid":"PR:P36607"}


id: PBO:0067356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 454, pseudogene","termid":"PBO:0067356"}


id: PR:Q9P7M4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPAP27G11.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.14c","synonyms":[{"name":"Spom972h-SPAP27G11.14c","type":"exact"}],"termid":"PR:Q9P7M4"}


id: PBO:0089383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase Pyp1","termid":"PBO:0089383"}


id: PBO:0041497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 57","termid":"PBO:0041497"}


id: GO:0043409
data:
  {"annotated_genes":["SJAG_03893","SJAG_03263","SJAG_00975","SJAG_02013","SJAG_05000","SJAG_02233","SJAG_04825","SJAG_04522","SJAG_02392","SJAG_02000","SJAG_03185","SJAG_01114"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84243,103260],"is_not":false,"summary":null,"term":"GO:0043409"},{"annotations":[103739,95522,114487,91904,103168,99918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[91079,92026,87684,95524,113256,114488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[103261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00975":null,"SJAG_01114":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03893":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of MAPK cascade","type":"exact"},{"name":"down regulation of MAPKKK cascade","type":"exact"},{"name":"down-regulation of MAPK cascade","type":"exact"},{"name":"down-regulation of MAPKKK cascade","type":"exact"},{"name":"downregulation of MAPK cascade","type":"exact"},{"name":"downregulation of MAPKKK cascade","type":"exact"},{"name":"inhibition of MAPK cascade","type":"narrow"},{"name":"inhibition of MAPKKK cascade","type":"narrow"},{"name":"negative regulation of MAP kinase cascade","type":"exact"},{"name":"negative regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"negative regulation of MAPKKK cascade","type":"exact"},{"name":"negative regulation of mitogen activated protein kinase cascade","type":"exact"},{"name":"negative regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"}],"termid":"GO:0043409","terms_by_termid":{"GO:0043409":null,"GO:0180040":null,"GO:1903138":null,"GO:1903753":null}}


id: GO:0030137
data:
  {"annotated_genes":["SJAG_04402","SJAG_01285","SJAG_00192","SJAG_04474","SJAG_04002","SJAG_03368","SJAG_02482","SJAG_01508","SJAG_04569","SJAG_01927","SJAG_02234","SJAG_04391","SJAG_04070"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87630,89166,89254,95597,110294],"is_not":false,"summary":null,"term":"GO:0030137"},{"annotations":[109905,103246,89253,94616,112544,99371,94527,100233,113577],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"}]},"cv_name":"cellular_component","definition":"A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport.","definition_xrefs":["GOC:mah","PMID:11252894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi-associated vesicle","termid":"GO:0005798"},{"relation_name":"is_a","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_01285":null,"SJAG_01508":null,"SJAG_01927":null,"SJAG_02234":null,"SJAG_02482":null,"SJAG_03368":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04474":null,"SJAG_04569":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"COPI-coated vesicle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"coatomer","type":"related"}],"termid":"GO:0030137","terms_by_termid":{"GO:0030126":null,"GO:0030137":null}}


id: GO:0031768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ghrelin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ghrelin receptor binding","synonyms":[{"name":"ghrelin receptor ligand","type":"narrow"},{"name":"type 1 growth hormone secretagogue GH-releasing peptide receptor binding","type":"exact"}],"termid":"GO:0031768"}


id: GO:0018639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: toluene + 1/2 O2 = benzyl alcohol, and xylene + 1/2 O2 = methylbenzyl alcohol.","definition_xrefs":["UM-BBD_enzymeID:e0172"],"gene_count":0,"genotype_count":0,"name":"obsolete xylene monooxygenase activity (obsolete GO:0018639)","termid":"GO:0018639"}


id: PATO:0000823
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000823 quinine taste (obsolete PATO:0000823)","termid":"PATO:0000823"}


id: PBO:0076510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 10","termid":"PBO:0076510"}


id: PBO:0045603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 14 (pseudogene)","termid":"PBO:0045603"}


id: PBO:0063095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARD3 divergent transcript","termid":"PBO:0063095"}


id: GO:0150008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endocytosis of large regions of presynaptic membrane after intense stimulation-mediated fusion of multiple synaptic vesicles. Bulk endocytosis is triggered by high loads of membrane addition through exocytosis of synaptic vesicles and elevated concentration of calcium in the presynapse.","definition_xrefs":["GOC:aruk","GOC:ha","PMID:19266323","PMID:28391090","GOC:bc","PMID:18250322","PMID:18579735","PMID:26430111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"bulk synaptic vesicle endocytosis","synonyms":[{"name":"ADBE","type":"exact"},{"name":"activity-dependent bulk endocytosis","type":"exact"},{"name":"activity-dependent bulk synaptic vesicle endocytosis","type":"exact"},{"name":"bulk endocytosis","type":"exact"}],"termid":"GO:0150008"}


id: FYPO:0004801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication begins later than normal during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PMID:25891897","PMID:22558440","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of premeiotic DNA replication","termid":"FYPO:0004628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"delayed onset of premeiotic DNA replication during azygotic meiosis","synonyms":[{"name":"delayed onset of DNA replication before azygotic meiotic cell cycle","type":"exact"},{"name":"delayed onset of premeiotic DNA replication during azygotic meiosis","type":"related"},{"name":"delayed onset of premeiotic DNA replication during azygotic meiosis and sporulation","type":"exact"},{"name":"delayed premeiotic DNA replication during azygotic meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004801"}


id: PR:Q9UTN6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A global transcription activator SNF2L2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit snf21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.01","secondary_identifiers":["UniProtKB:Q9UTN6"],"synonyms":[{"name":"ATP-dependent helicase snf21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RSC complex subunit snf21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SMARCA2","type":"exact"}],"termid":"PR:Q9UTN6"}


id: GO:0033806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine + fluoroacetaldehyde = acetaldehyde + 4-fluoro-L-threonine.","definition_xrefs":["RHEA:11748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016744"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016744"],"is_obsolete":false,"name":"fluorothreonine transaldolase activity","secondary_identifiers":["EC:2.2.1.8"],"synonyms":[{"name":"fluoroacetaldehyde:L-threonine aldehydetransferase activity","type":"related"}],"termid":"GO:0033806"}


id: PBO:0038897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor A3","termid":"PBO:0038897"}


id: GO:0002772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to an inhibitory C-type lectin receptor capable of inhibiting an immune effector process contributing to an immune response.","definition_xrefs":["PMID:15771571","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"inhibitory C-type lectin receptor signaling pathway","synonyms":[{"name":"Ly49 inhibitory receptor signaling pathway","type":"related"},{"name":"inhibitory C-type lectin receptor signalling pathway","type":"exact"}],"termid":"GO:0002772"}


id: GO:0009950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the dorsal/ventral axis. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral axis specification","synonyms":[{"name":"dorsal-ventral axis specification","type":"exact"},{"name":"dorsal/ventral axis determination","type":"related"},{"name":"dorsoventral axis specification","type":"exact"}],"termid":"GO:0009950"}


id: PBO:0039954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 1","termid":"PBO:0039954"}


id: CHEBI:30911
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucitol","termid":"CHEBI:30911"}


id: PBO:0011061
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"approved_timestamp","termid":"PBO:0011061"}


id: FYPO:0007199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mRNA splicing via the spliceosome of introns that have one or more deviations from optimal cis-splicing sequences is decreased. Nonconsensus features may include a longer distance between the branch point and 3' splice site, lacking a polypyrimidine tract, or use of alternative 5' splice sites.","definition_xrefs":["PomBase:mah","PMID:28446597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"decreased splicing of mRNA introns with nonconsensus cis-splicing sequences","synonyms":[{"name":"decreased mRNA splicing, via spliceosome, introns with nonconsensus cis-splicing sequences","type":"exact"},{"name":"decreased nuclear mRNA splicing, via spliceosome, introns with nonconsensus cis-splicing sequences","type":"exact"},{"name":"decreased splicing of mRNA introns with nonconsensus cis-splicing sequences","type":"broad"},{"name":"decreased splicing of mRNA introns with nonconsensus cis-splicing sequences during mitotic cell cycle","type":"related"},{"name":"decreased splicing of mRNA introns with nonconsensus cis-splicing sequences during vegetative growth","type":"exact"},{"name":"reduced splicing of mRNA introns with nonconsensus cis-splicing sequences","type":"exact"}],"termid":"FYPO:0007199"}


id: GO:2000554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 1 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell cytokine production","termid":"GO:0002724"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"},{"relation_name":"regulates","term_name":"T-helper 1 cell cytokine production","termid":"GO:0035744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of T-helper 1 cell cytokine production","synonyms":[{"name":"regulation of Th1 cell cytokine production","type":"exact"}],"termid":"GO:2000554"}


id: GO:0051512
data:
  {"annotated_genes":["SJAG_02392","SJAG_03581","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91900,90620,85895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell morphogenesis","termid":"GO:0010770"},{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"positively_regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of unidimensional cell growth","type":"narrow"},{"name":"positive regulation of cell elongation","type":"narrow"},{"name":"stimulation of unidimensional cell growth","type":"narrow"},{"name":"up regulation of unidimensional cell growth","type":"exact"},{"name":"up-regulation of unidimensional cell growth","type":"exact"},{"name":"upregulation of unidimensional cell growth","type":"exact"}],"termid":"GO:0051512","terms_by_termid":{"GO:0051519":null}}


id: PR:O94711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.11c","synonyms":[{"name":"Spom972h-gyp2","type":"exact"}],"termid":"PR:O94711"}


id: PBO:0063803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase regulatory subunit alpha 2","termid":"PBO:0063803"}


id: PR:P78937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sua1 gene.","definition_xrefs":["UniProtKB:P78937","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate adenylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.08c","synonyms":[{"name":"ATP-sulfurylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sua1","type":"exact"},{"name":"sulfate adenylate transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78937"}


id: GO:1901091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein tetramerization.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein oligomerization","termid":"GO:0032460"},{"relation_name":"is_a","term_name":"regulation of protein tetramerization","termid":"GO:1901090"},{"relation_name":"negatively_regulates","term_name":"protein tetramerization","termid":"GO:0051262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of protein tetramerization","synonyms":[{"name":"down regulation of protein tetramer assembly","type":"exact"},{"name":"down regulation of protein tetramer biosynthesis","type":"exact"},{"name":"down regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"down regulation of protein tetramer formation","type":"exact"},{"name":"down regulation of protein tetramerization","type":"exact"},{"name":"down-regulation of protein tetramer assembly","type":"exact"},{"name":"down-regulation of protein tetramer biosynthesis","type":"exact"},{"name":"down-regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"down-regulation of protein tetramer formation","type":"exact"},{"name":"down-regulation of protein tetramerization","type":"exact"},{"name":"downregulation of protein tetramer assembly","type":"exact"},{"name":"downregulation of protein tetramer biosynthesis","type":"exact"},{"name":"downregulation of protein tetramer biosynthetic process","type":"exact"},{"name":"downregulation of protein tetramer formation","type":"exact"},{"name":"downregulation of protein tetramerization","type":"exact"},{"name":"inhibition of protein tetramer assembly","type":"narrow"},{"name":"inhibition of protein tetramer biosynthesis","type":"narrow"},{"name":"inhibition of protein tetramer biosynthetic process","type":"narrow"},{"name":"inhibition of protein tetramer formation","type":"narrow"},{"name":"inhibition of protein tetramerization","type":"narrow"},{"name":"negative regulation of protein tetramer assembly","type":"exact"},{"name":"negative regulation of protein tetramer biosynthesis","type":"exact"},{"name":"negative regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"negative regulation of protein tetramer formation","type":"exact"}],"termid":"GO:1901091"}


id: RO:0002596
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between c and p if and only if c is capable of some activity a, and a regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_regulating","termid":"RO:0002596"}


id: PR:O42911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm25 gene.","definition_xrefs":["UniProtKB:O42911","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.04","synonyms":[{"name":"Spom972h-rsm25","type":"exact"}],"termid":"PR:O42911"}


id: GO:0100055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylserine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100055)","termid":"GO:0100055"}


id: GO:0031031
data:
  {"annotated_genes":["SJAG_00082","SJAG_03048","SJAG_03936","SJAG_01805","SJAG_04776"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83575,86034,89847,98481,106661],"is_not":false,"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of septation initiation signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of division septum assembly","termid":"GO:0010973"},{"relation_name":"is_a","term_name":"regulation of septation initiation signaling","termid":"GO:0031029"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"septation initiation signaling","termid":"GO:0031028"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03936":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"positive regulation of septation initiation signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of septation initiation signaling","type":"narrow"},{"name":"positive regulation of septation initiation network","type":"exact"},{"name":"positive regulation of septation initiation signaling cascade","type":"related"},{"name":"positive regulation of septation initiation signalling","type":"exact"},{"name":"stimulation of septation initiation signaling","type":"narrow"},{"name":"up regulation of septation initiation signaling","type":"exact"},{"name":"up-regulation of septation initiation signaling","type":"exact"},{"name":"upregulation of septation initiation signaling","type":"exact"}],"termid":"GO:0031031","terms_by_termid":{"GO:0031031":null}}


id: GO:0004414
data:
  {"annotated_genes":["SJAG_00395"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107233],"is_not":false,"summary":null,"term":"GO:0004414"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + acetyl-CoA = O-acetyl-L-homoserine + CoA.","definition_xrefs":["EC:2.3.1.31","RHEA:13701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00395":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"homoserine O-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOMOSERINE-O-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R01776"],"synonyms":[{"name":"L-homoserine O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-homoserine O-acetyltransferase activity","type":"related"},{"name":"homoserine O-trans-acetylase activity","type":"related"},{"name":"homoserine acetyltransferase activity","type":"related"},{"name":"homoserine transacetylase activity","type":"broad"},{"name":"homoserine-O-transacetylase activity","type":"related"}],"termid":"GO:0004414","terms_by_termid":{"GO:0004414":null}}


id: PBO:0087544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of ribosome-associated quality control trigger complex (RQT); the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0087544"}


id: GO:0052019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of hormones or growth regulators in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host hormone or growth regulator levels (obsolete GO:0052019)","synonyms":[{"name":"modulation by organism of hormone or growth regulator levels in other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052019"}


id: PBO:0073998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5","termid":"PBO:0073998"}


id: PBO:0042014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 71","termid":"PBO:0042014"}


id: PBO:0091538
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human TPM1 skeletal muscle isoform","termid":"PBO:0091538"}


id: PBO:0090752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Stt4","termid":"PBO:0090752"}


id: GO:0015787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of UDP-glucuronic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-glucuronic acid is a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"UDP-glucuronic acid transmembrane transport","synonyms":[{"name":"UDP-glucuronic acid transport","type":"related"}],"termid":"GO:0015787"}


id: PBO:0087667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner ring of the nuclear pore complex (NPC); contributes to NPC assembly and tethering of DNA to the nuclear periphery; both Nup170p and NUP157p are similar to human Nup155p; NUP157 has a paralog, NUP170, that arose from the whole genome duplication","termid":"PBO:0087667"}


id: PBO:0027715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_5'-end_processing","termid":"PBO:0027715"}


id: PBO:0069130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 380, pseudogene","termid":"PBO:0069130"}


id: GO:2000413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibronectin-dependent thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thymocyte migration","termid":"GO:2000410"},{"relation_name":"regulates","term_name":"fibronectin-dependent thymocyte migration","termid":"GO:0072681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibronectin-dependent thymocyte migration","synonyms":[{"name":"regulation of fibronectin-dependent immature T cell migration","type":"related"},{"name":"regulation of fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"regulation of fibronectin-dependent immature T-cell migration","type":"related"},{"name":"regulation of fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"regulation of fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000413"}


id: PBO:0028403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ubiquinone_binding","termid":"PBO:0028403"}


id: GO:0103118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-3-O-[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosamine(1-) + an (3R)-3-hydroxymyristoyl-[acp] = UDP-2,3-bis[O-(3R)-3-hydroxymyristoyl]-alpha-D-glucosamine + H+ + a holo-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.191","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase activity","secondary_identifiers":["MetaCyc:UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN","GO:0043764","RHEA:17817"],"synonyms":[{"name":"UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase activity","type":"related"}],"termid":"GO:0103118"}


id: PBO:0087700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RecQ (Sgs1p) - Topo III (Top3p) complex; stimulates superhelical relaxing, DNA catenation/decatenation and ssDNA binding activities of Top3p; involved in response to DNA damage; functions in S phase-mediated cohesion establishment via a pathway involving the Ctf18-RFC complex and Mrc1p; stimulates Top3p DNA catenation/decatenation activity; null mutants display increased rates of recombination and delayed S phase","termid":"PBO:0087700"}


id: GO:0031887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid droplet along a microtubule, mediated by motor proteins.","definition_xrefs":["PMID:9491895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lipid droplet transport along microtubule","synonyms":[{"name":"adiposome transport along microtubule","type":"exact"},{"name":"lipid body transport along microtubule","type":"exact"},{"name":"lipid particle transport along microtubule","type":"exact"}],"termid":"GO:0031887"}


id: PR:G2TRT4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP domain-containing new25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.21","synonyms":[{"name":"Spom972h-new25","type":"exact"}],"termid":"PR:G2TRT4"}


id: PBO:0074721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 80A","termid":"PBO:0074721"}


id: PBO:0046878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A3, pseudogene","termid":"PBO:0046878"}


id: PBO:0005686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 6 (predicted)","termid":"PBO:0005686"}


id: PBO:0089064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-dependent formaldehyde dehydrogenase","termid":"PBO:0089064"}


id: GO:0016074
data:
  {"annotated_genes":["SJAG_00752","SJAG_06613","SJAG_03984","SJAG_03179","SJAG_01369","SJAG_01176","SJAG_04754","SJAG_03234","SJAG_00854","SJAG_02350","SJAG_01521","SJAG_04942","SJAG_04768","SJAG_03448","SJAG_02553","SJAG_04321","SJAG_02382","SJAG_03112","SJAG_04527","SJAG_00943","SJAG_01191","SJAG_03745","SJAG_04153"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113850],"is_not":false,"summary":null,"term":"GO:0016074"},{"annotations":[106335,104222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000494"},{"annotations":[98262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[91400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"},{"annotations":[87112,100886,111470,109645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034965"},{"annotations":[88270,109421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"},{"annotations":[88273,93319,98173,91972,102583,111609,89105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071051"},{"annotations":[88856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031126"},{"annotations":[84413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016077"},{"annotations":[86825,83537,85116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043144"},{"annotations":[99131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034247"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving snoRNA, small nucleolar RNA, any of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins. They participate in the processing or modifications of many RNAs, mostly ribosomal RNAs (rRNAs) though snoRNAs are also known to target other classes of RNA, including spliceosomal RNAs, tRNAs, and mRNAs via a stretch of sequence that is complementary to a sequence in the targeted RNA.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_00854":null,"SJAG_00943":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01369":null,"SJAG_01521":null,"SJAG_02350":null,"SJAG_02382":null,"SJAG_02553":null,"SJAG_03112":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03448":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04754":null,"SJAG_04768":null,"SJAG_04942":null,"SJAG_06613":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box C/D sRNA metabolic process","type":"narrow"},{"name":"snoRNA metabolism","type":"narrow"}],"termid":"GO:0016074","terms_by_termid":{"GO:0000494":null,"GO:0000495":null,"GO:0016074":null,"GO:0016077":null,"GO:0031126":null,"GO:0034247":null,"GO:0034965":null,"GO:0043144":null,"GO:0071036":null,"GO:0071051":null,"GO:0106410":null}}


id: PBO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK inhibitor Srw1","termid":"PBO:0002630"}


id: GO:0048817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of hair follicle maturation.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"is_a","term_name":"negative regulation of hair follicle development","termid":"GO:0051799"},{"relation_name":"negatively_regulates","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hair follicle maturation","synonyms":[{"name":"down regulation of hair follicle maturation","type":"exact"},{"name":"down-regulation of hair follicle maturation","type":"exact"},{"name":"downregulation of hair follicle maturation","type":"exact"},{"name":"inhibition of hair follicle maturation","type":"narrow"}],"termid":"GO:0048817"}


id: PBO:0039303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALK receptor tyrosine kinase","termid":"PBO:0039303"}


id: SO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that decreases transcript stability with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_stability_variant","termid":"SO:0001546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_transcript_stability_variant","synonyms":[{"name":"decrease transcript stability variant","type":"exact"}],"termid":"SO:0001547"}


id: PR:C6Y4D3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4D3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.12c","synonyms":[{"name":"Spom972h-ecl1","type":"exact"}],"termid":"PR:C6Y4D3"}


id: GO:0010653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell communication via chemical coupling. Cell communication by chemical coupling is the process that mediates signaling interactions between one cell and another cell by the transfer of small, water-soluble molecules or metabolites between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:tb","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication by chemical coupling","termid":"GO:0010645"},{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"negatively_regulates","term_name":"cell communication by chemical coupling","termid":"GO:0010643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell communication by chemical coupling","termid":"GO:0010653"}


id: PBO:0060890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NETO1 divergent transcript","termid":"PBO:0060890"}


id: GO:1990601
data:
  {"annotated_genes":["SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100275],"is_not":false,"summary":null,"term":"GO:1990601"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within 5' overhang single-stranded deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["PMID:25203555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA endodeoxyribonuclease activity","termid":"GO:0000014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140097","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"5' overhang single-stranded DNA endodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990601","terms_by_termid":{"GO:1990601":null}}


id: GO:1990834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an odorant stimulus. An odorant is any substance capable of stimulating the sense of smell.","definition_xrefs":["PMID:11268007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to odorant","termid":"GO:1990834"}


id: PomGeneEx:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present at a higher level under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased","termid":"PomGeneEx:0000002"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level increased","synonyms":[{"name":"increased protein level","type":"exact"},{"name":"protein expression increased","type":"exact"}],"termid":"PomGeneEx:0000018"}


id: GO:0030232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex that binds to the insulin control element (ICE), a DNA sequence element found within the 5'-flanking region of the insulin gene, and activates ICE-mediated transcription.","definition_xrefs":["PMID:7935390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"insulin control element activator complex","synonyms":[{"name":"ICE activator complex","type":"exact"}],"termid":"GO:0030232"}


id: PBO:0084542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; ERP6 has a paralog, ERP1, that arose from the whole genome duplication","termid":"PBO:0084542"}


id: GO:0042480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eye photoreceptor development.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of eye photoreceptor cell development","termid":"GO:0042478"},{"relation_name":"negatively_regulates","term_name":"eye photoreceptor cell development","termid":"GO:0042462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eye photoreceptor cell development","synonyms":[{"name":"down regulation of eye photoreceptor cell development","type":"exact"},{"name":"down-regulation of eye photoreceptor cell development","type":"exact"},{"name":"downregulation of eye photoreceptor cell development","type":"exact"},{"name":"inhibition of eye photoreceptor cell development","type":"narrow"},{"name":"negative regulation of eye photoreceptor development","type":"exact"}],"termid":"GO:0042480"}


id: GO:1902330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in bacterial-type DNA replication (obsolete GO:1902330)","synonyms":[{"name":"replication priming involved in bacterial-type DNA replication","type":"related"}],"termid":"GO:1902330"}


id: PBO:0050345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 47","termid":"PBO:0050345"}


id: PBO:0018255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med27","termid":"PBO:0018255"}


id: PBO:0073060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 domain containing 1 pseudogene 2","termid":"PBO:0073060"}


id: PBO:0043780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A6","termid":"PBO:0043780"}


id: PBO:0059807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 33","termid":"PBO:0059807"}


id: GO:0060454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"regulation of gastric acid secretion","termid":"GO:0060453"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"positively_regulates","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastric acid secretion","termid":"GO:0060454"}


id: PR:O74897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1-complex protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.13","synonyms":[{"name":"Spom972h-swc5","type":"exact"}],"termid":"PR:O74897"}


id: PBO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.7","termid":"PBO:0000395"}


id: PBO:0080063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32","termid":"PBO:0080063"}


id: PBO:0064773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 4","termid":"PBO:0064773"}


id: FYPO:0001175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing maltose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on maltose carbon source","synonyms":[{"name":"normal cell population growth on maltose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on maltose carbon source","type":"exact"}],"termid":"FYPO:0001175"}


id: PBO:0040180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate beta-hydroxylase domain containing 1","termid":"PBO:0040180"}


id: GO:0000264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Subunit of a heterotrimeric G-protein GTPase; associates tightly with the gamma subunit.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heterotrimeric G-protein GTPase, beta-subunit (obsolete GO:0000264)","synonyms":[{"name":"heterotrimeric G-protein GTPase, beta-subunit","type":"exact"}],"termid":"GO:0000264"}


id: GO:1990898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which SPO11/Rec12-oligonucleotide complexes are removed from 5' DNA double-strand breaks induced during meiosis. Proteins involved in this process include the MRX/MRN complex and Sae2/Ctp1/RBBP8(CtIP).","definition_xrefs":["PMID:26130711"],"gene_count":0,"genotype_count":0,"name":"obsolete meiotic DNA double-strand break clipping (obsolete GO:1990898)","termid":"GO:1990898"}


id: FYPO:0005863
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that dots cannot be observed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased punctate nuclear protein localization","termid":"FYPO:0002624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"loss of punctate nuclear protein localization","synonyms":[{"name":"abolished punctate nuclear protein localization","type":"exact"},{"name":"loss of punctate nuclear protein localisation","type":"exact"},{"name":"loss of punctate nuclear protein localization during mitotic cell cycle","type":"related"},{"name":"loss of punctate nuclear protein localization during vegetative growth","type":"exact"},{"name":"nuclear dots absent","type":"related"}],"termid":"FYPO:0005863"}


id: PBO:0061734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoredoxin like 1","termid":"PBO:0061734"}


id: GO:0006762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrofolate reduction (obsolete GO:0006762)","synonyms":[{"name":"dihydrofolate reduction","type":"exact"}],"termid":"GO:0006762"}


id: GO:1903102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","GOC:bhm","PMID:19037259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate biosynthetic process","termid":"GO:0046854"},{"relation_name":"is_a","term_name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process","termid":"GO:1903100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate biosynthetic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate anabolism","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate biosynthesis","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate formation","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate synthesis","type":"exact"}],"termid":"GO:1903102"}


id: PBO:0045486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSC1/DSC2 antisense RNA","termid":"PBO:0045486"}


id: PBO:0085755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in bud growth and assembly of the septin ring; proposed to have kinase-dependent and kinase-independent activities; negatively regulates Fpk1p kinase that stimulates phospholipid flippases Dnf1p and Dnf2p; undergoes autophosphorylation; similar to Hsl1p; GIN4 has a paralog, KCC4, that arose from the whole genome duplication","termid":"PBO:0085755"}


id: PBO:0075205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 17","termid":"PBO:0075205"}


id: GO:1905067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in heart development.","definition_xrefs":["GOC:BHF","GOC:bc","GOC:TermGenie","PMID:25034767","GO_REF:0000058","GOC:BHF_miRNA"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in heart development (obsolete GO:1905067)","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt signaling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt-activated signaling pathway involved in heart development","type":"narrow"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:1905067"}


id: PBO:0050728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 14","termid":"PBO:0050728"}


id: CHEBI:16761
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP","termid":"CHEBI:16761"}


id: PBO:0053543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 548","termid":"PBO:0053543"}


id: PBO:0029978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_export_from_nucleus","termid":"PBO:0029978"}


id: PBO:0039839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 9","termid":"PBO:0039839"}


id: PBO:0071472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 13","termid":"PBO:0071472"}


id: GO:1901201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extracellular matrix assembly.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"regulates","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular matrix assembly","termid":"GO:1901201"}


id: PBO:0069801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1087, pseudogene","termid":"PBO:0069801"}


id: GO:0022627
data:
  {"annotated_genes":["SJAG_02253","SJAG_02904","SJAG_04814","SJAG_04174","SJAG_00503","SJAG_01512","SJAG_01132","SJAG_02894","SJAG_02340","SJAG_03859","SJAG_04475","SJAG_04476","SJAG_04998","SJAG_04029","SJAG_02335","SJAG_00069","SJAG_03262","SJAG_04672","SJAG_03424","SJAG_04746","SJAG_02870","SJAG_02585","SJAG_01632","SJAG_04168","SJAG_01609","SJAG_04663","SJAG_01366","SJAG_03034","SJAG_00733","SJAG_02280","SJAG_04695","SJAG_02861","SJAG_03788","SJAG_02020","SJAG_00523","SJAG_02224","SJAG_02749","SJAG_03568","SJAG_01387","SJAG_02522","SJAG_01287","SJAG_01548","SJAG_00468","SJAG_02477","SJAG_01296","SJAG_02682","SJAG_02803","SJAG_04188","SJAG_03422","SJAG_03762","SJAG_04342","SJAG_00465","SJAG_02479","SJAG_04324","SJAG_03254","SJAG_01226","SJAG_04204","SJAG_02046","SJAG_02184","SJAG_00544","SJAG_04256"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73687,83695,83696,84676,84677,84711,84712,84961,84962,86586,86587,87032,87033,87387,87622,89038,89039,89555,89556,89711,89712,89713,90598,90599,90795,90948,90949,91726,91727,92402,92403,92490,92491,92627,93475,93476,94410,94411,94710,94711,94739,94740,95233,95234,95431,95733,95734,95873,95874,96122,96123,96546,96859,96860,97633,97634,97807,97808,97809,99923,99967,99973,100358,100359,100548,101516,101517,101543,101544,101678,101781,101782,101795,101796,102169,102170,102199,102819,102820,102915,102916,104038,104039,106116,106751,107549,107550,107752,107753,107754,108483,108484,109259,109260,109580,109581,109582,110354,110355,110702,110703,112465,112466,112603,113584,113590,114879],"is_not":false,"summary":null,"term":"GO:0022627"}]},"cv_name":"cellular_component","definition":"The small subunit of a ribosome located in the cytosol.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small ribosomal subunit","termid":"GO:0015935"},{"relation_name":"part_of","term_name":"cytosolic ribosome","termid":"GO:0022626"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00069":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00503":null,"SJAG_00523":null,"SJAG_00544":null,"SJAG_00733":null,"SJAG_01132":null,"SJAG_01226":null,"SJAG_01287":null,"SJAG_01296":null,"SJAG_01366":null,"SJAG_01387":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01609":null,"SJAG_01632":null,"SJAG_02020":null,"SJAG_02046":null,"SJAG_02184":null,"SJAG_02224":null,"SJAG_02253":null,"SJAG_02280":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02522":null,"SJAG_02585":null,"SJAG_02682":null,"SJAG_02749":null,"SJAG_02803":null,"SJAG_02861":null,"SJAG_02870":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03034":null,"SJAG_03254":null,"SJAG_03262":null,"SJAG_03422":null,"SJAG_03424":null,"SJAG_03568":null,"SJAG_03762":null,"SJAG_03788":null,"SJAG_03859":null,"SJAG_04029":null,"SJAG_04168":null,"SJAG_04174":null,"SJAG_04188":null,"SJAG_04204":null,"SJAG_04256":null,"SJAG_04324":null,"SJAG_04342":null,"SJAG_04475":null,"SJAG_04476":null,"SJAG_04663":null,"SJAG_04672":null,"SJAG_04695":null,"SJAG_04746":null,"SJAG_04814":null,"SJAG_04998":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0022626"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0022626","GO:0005575","GO:0032991","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"cytosolic small ribosomal subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030873","GO:0030499","GO:0009283","GO:0005843"],"synonyms":[{"name":"30S ribosomal subunit","type":"narrow"},{"name":"40S ribosomal subunit","type":"narrow"},{"name":"eukaryotic ribosomal SSU","type":"narrow"},{"name":"prokaryotic small ribosomal subunit","type":"narrow"}],"termid":"GO:0022627","terms_by_termid":{"GO:0022627":null}}


id: PBO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase Spk1","termid":"PBO:0001833"}


id: PBO:0113425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Secreted alpha-galactosidase; required for catabolic conversion of melibiose to glucose and galactose; regulated by several GAL genes; mapped to -77.0 cM on chrII","termid":"PBO:0113425"}


id: PBO:0001027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Usp (universal stress protein) family protein, implicated in meiotic chromosome segregation","termid":"PBO:0001027"}


id: GO:2001096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a cellotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cellotriose transport","termid":"GO:2001096"}


id: PBO:0089999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase","termid":"PBO:0089999"}


id: GO:0140573
data:
  {"annotated_genes":["SJAG_00302"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115774],"is_not":false,"summary":null,"term":"GO:0140573"}]},"cv_name":"cellular_component","definition":"A complex comprised of DNA wound around a multisubunit core and associated proteins containing the histone H3, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["PMID:33155135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome","termid":"GO:0000786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"histone H3-containing nucleosome","references_by_uniquename":{"PMID:24184107":null},"synonyms":[{"name":"histone H3 containing nucleosome","type":"exact"}],"termid":"GO:0140573","terms_by_termid":{"GO:0140573":null}}


id: PBO:0030625
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_tyrosine_phosphorylation","termid":"PBO:0030625"}


id: PBO:0074464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase acid like 3A","termid":"PBO:0074464"}


id: GO:0141111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of of cGAS/STING signaling pathway.","definition_xrefs":["PMID:37802025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cGAS/STING signaling pathway","termid":"GO:0140896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cGAS/STING signaling pathway","termid":"GO:0141111"}


id: FYPO:0005003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the composition of a protein complex differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein complex composition","synonyms":[{"name":"abnormal protein complex stoichiometry","type":"exact"},{"name":"abnormal protein-containing complex composition","type":"exact"}],"termid":"FYPO:0005003"}


id: PBO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit d (predicted)","termid":"PBO:0002114"}


id: FYPO:0006382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall organization is abnormal when the cell is subject to nitrogen starvation. Cell wall organization results in the assembly, arrangement of constituent parts, or disassembly of the fungal-type cell wall.","definition_xrefs":["GO:0031505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall organization","termid":"FYPO:0004805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004805"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004805","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell wall organization during nitrogen starvation","synonyms":[{"name":"abnormal cell wall organisation during nitrogen starvation","type":"exact"},{"name":"abnormal cell wall organization during nitrogen depletion","type":"exact"},{"name":"abnormal cell wall organization during nitrogen deprivation","type":"exact"},{"name":"abnormal fungal-type cell wall organization during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006382"}


id: GO:1904083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of epiboly.","definition_xrefs":["GOC:TermGenie","PMID:24892953","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of epiboly (obsolete GO:1904083)","synonyms":[{"name":"regulation of epiboly","type":"exact"}],"termid":"GO:1904083"}


id: PBO:0074635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 29","termid":"PBO:0074635"}


id: GO:1900376
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"regulates","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:1900376","terms_by_termid":{"GO:1905569":null}}


id: PBO:0062759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 4","termid":"PBO:0062759"}


id: GO:0097055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of agmatine ((4-aminobutyl)guanidine, NH2-CH2-CH2-CH2-CH2-NH-C(-NH2)(=NH)). Agmatine is the decarboxylation product of the amino acid arginine and is an intermediate in polyamine biosynthesis. It is synthesized in the brain, stored in synaptic vesicles, accumulated by uptake, released by membrane depolarization, and inactivated by agmatinase.","definition_xrefs":["GOC:yaf","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"agmatine biosynthetic process","synonyms":[{"name":"agmatine anabolism","type":"exact"},{"name":"agmatine biosynthesis","type":"exact"},{"name":"agmatine formation","type":"exact"},{"name":"agmatine synthesis","type":"exact"}],"termid":"GO:0097055"}


id: PBO:0029296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_S-adenosyl-3-thiopropylamine_level_during_G0","termid":"PBO:0029296"}


id: GO:0052414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving glucans within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont glucan (obsolete GO:0052414)","termid":"GO:0052414"}


id: GO:0150064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Early postnatal vertebrate developmental process, during which axons of retinal ganglion cells (RGCs), transmitting overlapping inputs from both eyes, segregate into distinct eye-specific non-overlapping regions in the dorsal lateral geniculate nucleus (dLGN) of the thalamus.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:29322522","PMID:22632727","PMID:16025107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"},{"relation_name":"part_of","term_name":"visual system development","termid":"GO:0150063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vertebrate eye-specific patterning","synonyms":[{"name":"binocular vision development","type":"related"},{"name":"eye-specific patterning","type":"broad"},{"name":"eye-specific segregation","type":"broad"},{"name":"vertebrate eye-specific segregation","type":"exact"}],"termid":"GO:0150064"}


id: PBO:0046847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 7 pseudogene 2","termid":"PBO:0046847"}


id: PR:Q9P6Q5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01122","PANTHER:PTHR11241:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine 5'-triphosphate nucleotidohydrolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.05c","secondary_identifiers":["UniProtKB:Q9P6Q5"],"synonyms":[{"name":"Spom972h-DUT","type":"exact"},{"name":"dUTP pyrophosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dUTPase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6Q5"}


id: FYECO:0000137
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 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sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and 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type"}]}]},"win1delta":{"display_name":"win1delta","display_uniquename":"win1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04777:allele-1","expression":"Null"}]}]},"wis1delta":{"display_name":"wis1delta","display_uniquename":"wis1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02342:allele-1","expression":"Null"}]}]},"wis4delta":{"display_name":"wis4delta","display_uniquename":"wis4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03384:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01946","SJAG_03596","SJAG_05207","SJAG_02392","SJAG_01680","SJAG_00028","SJAG_03575","SJAG_04280","SJAG_00118","SJAG_01143","SJAG_02266","SJAG_03892","SJAG_04522","SJAG_03198","SJAG_01205"],"name":"YES","references_by_uniquename":{"PMID:20368354":null,"PMID:22300943":null,"PMID:23090706":null,"PMID:23786411":null,"PMID:25866389":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32915139":null,"PMID:36058798":null,"PMID:36695178":null,"PMID:37164017":null,"PMID:37233261":null},"secondary_identifiers":["FYECO:0000012"],"single_locus_annotated_genes":["SJAG_01745","SJAG_04777","SJAG_04332","SJAG_04284","SJAG_02771","SJAG_03143","SJAG_02923","SJAG_04883","SJAG_00266","SJAG_02592","SJAG_01205","SJAG_00514","SJAG_01143","SJAG_01946","SJAG_02252","SJAG_01410","SJAG_04522","SJAG_04280","SJAG_02266","SJAG_04009","SJAG_01794","SJAG_04287","SJAG_02013","SJAG_03596","SJAG_01050","SJAG_00993","SJAG_03920","SJAG_03720","SJAG_01680","SJAG_00429","SJAG_00364","SJAG_01753","SJAG_00409","SJAG_03581","SJAG_02379","SJAG_02819","SJAG_04312","SJAG_04551","SJAG_02392","SJAG_03198","SJAG_02527","SJAG_03384","SJAG_00028","SJAG_03753","SJAG_04697","SJAG_01355","SJAG_01181","SJAG_03453","SJAG_00118","SJAG_02576","SJAG_05207","SJAG_01956","SJAG_03048","SJAG_03892","SJAG_02486","SJAG_04843","SJAG_02342","SJAG_00601","SJAG_04671","SJAG_03351","SJAG_01605","SJAG_01718","SJAG_03575"],"single_locus_genotype_uniquenames":["oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","crb2delta","byr2delta","gef1delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","wis4delta","mid2delta","pom1delta","chk1delta","gms1delta","rad9delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pek1delta","lem2delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","tel1delta","pyp1delta","ste11delta","pmk1delta","pka1delta","cem1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","mrc1delta","scd2delta","ace2delta","sty1delta","mid1delta","mdh1delta","sdh3delta","nur1delta","rad24delta","rad26delta","byr1delta","efc25delta","win1delta","cds1delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","rad51delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","ras1delta","oar2delta","cox6delta","sep1delta","rad1delta","spk1delta","gap1delta","wis1delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","fum1delta","rga6delta","nup61delta","gpd1delta","rip1delta","scd1delta","mkh1delta","rad25delta","cmp7delta","rad3delta","chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type","ptp4delta","rga4delta","atf1delta","ste6delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"YE","type":"narrow"},{"name":"YE4S","type":"narrow"},{"name":"YE5S","type":"narrow"},{"name":"complex medium","type":"related"},{"name":"glucose rich medium","type":"exact"},{"name":"normal glucose rich medium","type":"exact"},{"name":"standard dextrose rich medium","type":"exact"},{"name":"standard glucose rich medium","type":"exact"}],"termid":"FYECO:0000137","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000103":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYECO:0000338":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0050996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT122 pseudogene 3","termid":"PBO:0050996"}


id: GO:0090139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which mitochondrial chromosomal DNA and associated proteins organize into a compact, orderly structure.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial chromosome packaging","synonyms":[{"name":"mitochondrial DNA packaging","type":"exact"}],"termid":"GO:0090139"}


id: PBO:0057721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-6","termid":"PBO:0057721"}


id: GO:0072147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular parietal epithelial cell. Glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport. These cells may also give rise to podocytes.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"glomerular parietal epithelial cell differentiation","termid":"GO:0072139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular parietal epithelial cell fate commitment","synonyms":[{"name":"Bowman's capsule cell fate commitment","type":"exact"}],"termid":"GO:0072147"}


id: PBO:0081454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 321, pseudogene","termid":"PBO:0081454"}


id: PBO:0091172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex Dpy-30 domain subunit Sdc1","termid":"PBO:0091172"}


id: PBO:0088149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar ubiquitin ligase-substrate adaptor; delivered to vacuole using ubiquitin as a sorting signal; presumably functions within the endosomal-vacuolar trafficking pathway, affecting events that determine whether plasma membrane proteins are degraded or routed to the plasma membrane; RCR2 has a paralog, RCR1, that arose from the whole genome duplication","termid":"PBO:0088149"}


id: GO:0150018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a basal dendrite over time, from its formation to the mature structure.","definition_xrefs":["PMID:22683681","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basal dendrite development","termid":"GO:0150018"}


id: PBO:0004523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate isomerase (predicted)","termid":"PBO:0004523"}


id: PBO:0069595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 871, pseudogene","termid":"PBO:0069595"}


id: GO:0018104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of covalently linking peptidoglycan (murein) to proteins.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan biosynthetic process","termid":"GO:0009252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"peptidoglycan-protein cross-linking","termid":"GO:0018104"}


id: GO:0050767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neurogenesis, the generation of cells in the nervous system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system development","termid":"GO:0051960"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neurogenesis","termid":"GO:0050767"}


id: PATO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001175 urine composition (obsolete PATO:0001175)","termid":"PATO:0001175"}


id: PBO:0090148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin, C-terminal","termid":"PBO:0090148"}


id: PBO:0082097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"73 kDa subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; relocates to the cytosol under hypoxic conditions; deletion mutants are temperature-sensitive; SNF12 has a paralog, RSC6, that arose from the whole genome duplication","termid":"PBO:0082097"}


id: GO:0070484
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dehydro-D-arabinono-1,4-lactone, the gamma-lactone (5R)-3,4-dihydroxy-5-(hydroxymethyl)furan-2(5H)-one.","definition_xrefs":["GOC:cjk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dehydro-D-arabinono-1,4-lactone metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dehydro-D-arabinono-1,4-lactone metabolism","type":"exact"}],"termid":"GO:0070484","terms_by_termid":{"GO:0070485":null}}


id: GO:0046992
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061686"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which X-H and Y-H form X-Y.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.21.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with other acceptors","type":"narrow"}],"termid":"GO:0046992","terms_by_termid":{"GO:0061686":null}}


id: GO:0000172
data:
  {"annotated_genes":["SJAG_01551","SJAG_01369","SJAG_04582","SJAG_01623","SJAG_03425","SJAG_00955","SJAG_03234","SJAG_04916","SJAG_06613","SJAG_02553","SJAG_02547","SJAG_03952","SJAG_03796"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87111,90747,92557,92854,95570,100664,100884,101771,101772,109643,111468,111556,114763],"is_not":false,"summary":null,"term":"GO:0000172"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains an RNA molecule of the snoRNA family, and cleaves the rRNA precursor as part of rRNA transcript processing. It also has other roles: In S. cerevisiae it is involved in cell cycle-regulated degradation of daughter cell-specific mRNAs, while in mammalian cells it also enters the mitochondria and processes RNAs to create RNA primers for DNA replication.","definition_xrefs":["PMID:14729943","PMID:10690410","PMID:7510714","GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA-containing ribonucleoprotein complex","termid":"GO:0005732"},{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00955":null,"SJAG_01369":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ribonuclease MRP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNase MRP complex","type":"exact"},{"name":"ribonuclease mitochondrial RNA processing complex","type":"exact"}],"termid":"GO:0000172","terms_by_termid":{"GO:0000172":null}}


id: PBO:0055919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A7, pseudogene","termid":"PBO:0055919"}


id: GO:0031371
data:
  {"annotated_genes":["SJAG_02319","SJAG_00293","SJAG_00320","SJAG_03006","SJAG_02918"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112961],"is_not":false,"summary":null,"term":"GO:0031371"},{"annotations":[89421,87256,115014,112379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033503"}]},"cv_name":"cellular_component","definition":"Any complex that possesses ubiquitin conjugating enzyme activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_02319":null,"SJAG_02918":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ubiquitin conjugating enzyme complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"E2 complex","type":"related"}],"termid":"GO:0031371","terms_by_termid":{"GO:0031371":null,"GO:0033503":null}}


id: PBO:0068110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 417","termid":"PBO:0068110"}


id: PBO:0046959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 81 member A","termid":"PBO:0046959"}


id: GO:0005146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an leukemia inhibitory factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"leukemia inhibitory factor receptor binding","synonyms":[{"name":"leukemia inhibitory factor","type":"narrow"},{"name":"leukemia inhibitory factor receptor ligand","type":"narrow"}],"termid":"GO:0005146"}


id: PBO:0064566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP1 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064566"}


id: FYPO:0002797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein degradation","synonyms":[{"name":"decreased protein breakdown","type":"exact"},{"name":"decreased protein catabolic process","type":"exact"},{"name":"decreased protein catabolism","type":"exact"},{"name":"reduced protein degradation","type":"exact"}],"termid":"FYPO:0002797"}


id: FYECO:0000118
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glutathione was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glutathione","synonyms":[{"name":"GSH added","type":"exact"},{"name":"L-gamma-glutamyl-L-cysteinylglycine added","type":"exact"}],"termid":"FYECO:0000118"}


id: PBO:0043878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB binding protein","termid":"PBO:0043878"}


id: GO:1900119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of execution phase of apoptosis","termid":"GO:1900117"},{"relation_name":"positively_regulates","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of execution phase of apoptosis","synonyms":[{"name":"activation of execution phase of apoptosis","type":"narrow"},{"name":"up regulation of execution phase of apoptosis","type":"exact"},{"name":"up-regulation of execution phase of apoptosis","type":"exact"},{"name":"upregulation of execution phase of apoptosis","type":"exact"}],"termid":"GO:1900119"}


id: GO:0051717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,4,5-trisphosphate + phosphate.","definition_xrefs":["RHEA:77155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.62-RXN","Reactome:R-HSA-1855200","Reactome:R-HSA-1855205"],"synonyms":[{"name":"inositol (1,3,4,5)-tetrakisphosphate 3-phosphatase activity","type":"related"},{"name":"inositol 1,3,4,5-tetrakisphosphate 3-phosphomonoesterase activity","type":"related"},{"name":"inositol 1,3,4,5-tetrakisphosphate-5-phosphomonoesterase activity","type":"related"}],"termid":"GO:0051717"}


id: PBO:0091473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7b","termid":"PBO:0091473"}


id: PBO:0072624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 10 homolog B2","termid":"PBO:0072624"}


id: FYPO:0003864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount a specific substance measured in a cell is lower than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of substance in cell during G0","synonyms":[{"name":"decreased accumulation of substance in cell during G0","type":"related"},{"name":"decreased level of substance in cell during cell quiescence","type":"exact"},{"name":"decreased level of substance in cell during quiescence","type":"exact"},{"name":"decreased substance level during G0","type":"exact"},{"name":"reduced level of substance in cell during G0","type":"exact"}],"termid":"FYPO:0003864"}


id: MOD:00957
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of, or a change resulting in an alteration of the measured molecular mass of, a peptide or protein amino acid residue with a secondary loss of a neutral carbon dioxide molecular fragment.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified residue with neutral loss of carbon dioxide","synonyms":[{"name":"dCO2ModRes","type":"exact"}],"termid":"MOD:00957"}


id: GO:0060031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interdigitation of cells along the mediolateral axis during gastrulation.","definition_xrefs":["PMID:12062082","GOC:dgf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mediolateral intercalation","termid":"GO:0060031"}


id: PBO:0064036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 70","termid":"PBO:0064036"}


id: PBO:0076583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 8","termid":"PBO:0076583"}


id: GO:0022883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a zinc ion or zinc ions from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"monoatomic cation efflux transmembrane transporter activity","termid":"GO:0046583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"zinc efflux transmembrane transporter activity","synonyms":[{"name":"zinc efflux permease activity","type":"exact"}],"termid":"GO:0022883"}


id: PBO:0088028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein; component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRNA; required for the biogenesis of18S rRNA","termid":"PBO:0088028"}


id: PBO:0089235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial nuclease Lcl3, implicated in DNA repair","termid":"PBO:0089235"}


id: PBO:0048693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIS family zinc finger 2","termid":"PBO:0048693"}


id: PBO:0090591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial LYR family protein Lyr2","termid":"PBO:0090591"}


id: PBO:0039533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD34C antisense RNA 1","termid":"PBO:0039533"}


id: PBO:0067898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 200","termid":"PBO:0067898"}


id: PBO:0081246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 17","termid":"PBO:0081246"}


id: GO:0046729
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stable empty viral capsid produced during the assembly of viruses.","definition_xrefs":["ISBN:1555811272","ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral procapsid","termid":"GO:0046729"}


id: PR:O14317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp203 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2-C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.08","synonyms":[{"name":"Spom972h-rpp203","type":"exact"}],"termid":"PR:O14317"}


id: PBO:0013785
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli MutY","termid":"PBO:0013785"}


id: PBO:0000289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR21 family","termid":"PBO:0000289"}


id: GO:0102638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate + [1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate = [1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete [1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase activity (obsolete GO:0102638)","termid":"GO:0102638"}


id: PBO:0073464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFTPD antisense RNA 1","termid":"PBO:0073464"}


id: _global:transcribed_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Inverse of transcribed_from.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_to","termid":"_global:transcribed_to"}


id: PBO:0044624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin domain containing 2B","termid":"PBO:0044624"}


id: PBO:0068012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 317","termid":"PBO:0068012"}


id: PBO:0050998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 172","termid":"PBO:0050998"}


id: GO:0036398
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multi-protein complex containing at least the T-cell receptor complex and the LAT (linker for activation of T cells) scaffold protein. Also contains a variety of signaling proteins including co-receptors, kinases, phosphatases and adaptors such as CD8. Connects events on the plasma membrane to distal signaling cascades to ultimately modulate T cell biology.","definition_xrefs":["PMID:17534068","GOC:krc","PMID:22426112","PMID:20107804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TCR signalosome","synonyms":[{"name":"LAT signalosome","type":"exact"},{"name":"linker for activation of T cells signalosome","type":"exact"}],"termid":"GO:0036398"}


id: PBO:0084675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial asparaginyl-tRNA synthetase","termid":"PBO:0084675"}


id: GO:1990906
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium-like cell projection emanating from the inner segment and running alongside the outer segment of photoreceptors.","definition_xrefs":["GOC:dph","PMID:25125189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"accessory outer segment","termid":"GO:1990906"}


id: PR:Q10323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphoceramide mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.11c","synonyms":[{"name":"IPC mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-imt3","type":"exact"}],"termid":"PR:Q10323"}


id: GO:1902709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a plumbagin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23028742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to plumbagin","termid":"GO:1902708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to plumbagin","termid":"GO:1902709"}


id: PBO:0068890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 131, pseudogene","termid":"PBO:0068890"}


id: PBO:0047685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin leucine rich transmembrane protein 2","termid":"PBO:0047685"}


id: GO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the site where a daughter cell will form, in organisms that reproduce by budding. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0007163","GO:0008150"],"is_obsolete":false,"name":"cellular bud site selection","synonyms":[{"name":"bud site selection/establishment of cell polarity","type":"broad"}],"termid":"GO:0000282"}


id: PBO:0040266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atlastin GTPase 1","termid":"PBO:0040266"}


id: PBO:0108682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion_or_chimera","termid":"PBO:0108682"}


id: PBO:0091115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aspartase, involved in protein processing","termid":"PBO:0091115"}


id: GO:0009918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-dehydroepisterol = 24-methylenecholesterol.","definition_xrefs":["ISBN:0943088399"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol delta7 reductase activity (obsolete GO:0009918)","synonyms":[{"name":"sterol delta-7 reductase activity","type":"exact"}],"termid":"GO:0009918"}


id: PBO:0071627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 46","termid":"PBO:0071627"}


id: PR:O13731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubr11 gene.","definition_xrefs":["UniProtKB:O13731","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase ubr11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.11","synonyms":[{"name":"N-end-recognizing protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"N-recognin-11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubr11","type":"exact"}],"termid":"PR:O13731"}


id: PBO:0064673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 8","termid":"PBO:0064673"}


id: PR:O14295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- plr1 gene.","definition_xrefs":["UniProtKB:O14295","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.11","synonyms":[{"name":"PL reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PL-red (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-plr1","type":"exact"}],"termid":"PR:O14295"}


id: SO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variable gene that rearranges at the DNA level and codes the variable region of the variable domain of an Immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_V_gene","synonyms":[{"name":"IGV_gene","type":"exact"},{"name":"IG_variable_gene","type":"exact"},{"name":"Immunoglobulin_variable_gene","type":"exact"}],"termid":"SO:0002126"}


id: PBO:0069863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1150, pseudogene","termid":"PBO:0069863"}


id: PBO:0029693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_iron_level","termid":"PBO:0029693"}


id: GO:0050686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mRNA processing.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"is_a","term_name":"negative regulation of mRNA metabolic process","termid":"GO:1903312"},{"relation_name":"negatively_regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"negative regulation of mRNA processing","synonyms":[{"name":"down regulation of mRNA processing","type":"exact"},{"name":"down-regulation of mRNA processing","type":"exact"},{"name":"downregulation of mRNA processing","type":"exact"},{"name":"inhibition of mRNA processing","type":"narrow"}],"termid":"GO:0050686"}


id: GO:0102813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cyanidin 3-(p-coumaroyl)-glucoside = shisonin + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-D-glucose:cyanidin 3-(p-coumaroyl)-glucoside 5-O-glucosyltransferase activity (obsolete GO:0102813)","termid":"GO:0102813"}


id: PBO:0013448
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soluble Myh1 level decreases in presence of cisplatin or hydrogen peroxide","termid":"PBO:0013448"}


id: GO:1904079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any negative regulation of transcription from RNA polymerase II promoter that is involved in negative regulation of neuron apoptotic process.","definition_xrefs":["PMID:20150917","GO_REF:0000060","GOC:kmv","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process (obsolete GO:1904079)","synonyms":[{"name":"down regulation of global transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in neuron survival","type":"related"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"narrow"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"narrow"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in neuron survival","type":"narrow"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in neuron survival","type":"related"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"narrow"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"narrow"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in neuron survival","type":"narrow"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in neuron survival","type":"related"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"narrow"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"narrow"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in neuron survival","type":"narrow"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in neuron survival","type":"related"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"narrow"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"narrow"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in neuron survival","type":"narrow"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in neuron survival","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in down regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in down-regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in downregulation of neuron apoptosis","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in inhibition of neuron apoptosis","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in negative regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in neuron survival","type":"related"},{"name":"negative regulation of transcription from Pol II promoter involved in down regulation of neuron apoptosis","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter involved in down-regulation of neuron apoptosis","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter involved in downregulation of neuron apoptosis","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter involved in inhibition of neuron apoptosis","type":"narrow"},{"name":"negative regulation of transcription from Pol II promoter involved in negative regulation of neuron apoptosis","type":"narrow"},{"name":"negative regulation of transcription from Pol II promoter involved in negative regulation of neuron apoptotic process","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter involved in negative regulation of programmed cell death, neurons","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter involved in neuron survival","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in neuron survival","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in down regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in down-regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in downregulation of neuron apoptosis","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in inhibition of neuron apoptosis","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in negative regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in neuron survival","type":"related"}],"termid":"GO:1904079"}


id: PBO:0066776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 74","termid":"PBO:0066776"}


id: PBO:0075674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase small subunit B","termid":"PBO:0075674"}


id: PBO:0012017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialar to S. pombe SPAC1F8.07c (paralog)","termid":"PBO:0012017"}


id: GO:0036166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reversible switch of a cell from one cell type or form to another, at a frequency above the expected frequency for somatic mutations. Phenotypic switching involves changes in cell morphology and altered gene expression patterns. For example, Candida albicans switches from white cells to opaque cells for sexual mating. Phenotypic switching also occurs in multicellular organisms; smooth muscle cells (SMCs) exhibit phenotypic transitions to allow rapid adaption to fluctuating environmental cues.","definition_xrefs":["GOC:di","PMID:12443899","PMID:8456504","Wikipedia:Phenotypic_switching","PMID:22406749","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenotypic switching","synonyms":[{"name":"phenotypic dimorphism","type":"related"}],"termid":"GO:0036166"}


id: MOD:02061
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-selenocysteine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-selenocysteine residue","termid":"MOD:02061"}


id: GO:0047137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-acetamidofluorene + NAD(P)+ + H2O = N-hydroxy-2-acetamidofluorene + NAD(P)H + H+.","definition_xrefs":["EC:1.7.1.12","MetaCyc:1.7.1.12-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"N-hydroxy-2-acetamidofluorene reductase activity","synonyms":[{"name":"2-acetamidofluorene:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"N-hydroxy-2-acetylaminofluorene reductase activity","type":"related"},{"name":"NAD(P)H2:N-hydroxy-2-acetamidofluorene N-oxidoreductase activity","type":"related"},{"name":"NAD(P)H:N-hydroxy-2-acetamidofluorene N-oxidoreductase activity","type":"related"}],"termid":"GO:0047137"}


id: PBO:0088525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex zinc finger subunit Yth1","termid":"PBO:0088525"}


id: PBO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor (predicted)","termid":"PBO:0002206"}


id: PBO:0003755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein Mlo3","termid":"PBO:0003755"}


id: PBO:0111857
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 family co-repressor","termid":"PBO:0111857"}


id: PBO:0051866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon stimulated exonuclease gene 20","termid":"PBO:0051866"}


id: PATO:0002073
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that arises from the synergistic strength of bond affinities between multiple bond interactions.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avidity","termid":"PATO:0002073"}


id: PBO:0079951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 4","termid":"PBO:0079951"}


id: PBO:0064198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta enriched 1","termid":"PBO:0064198"}


id: GO:0008998
data:
  {"annotated_genes":["SJAG_02948"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71077],"is_not":false,"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [thioredoxin]-disulfide + a 2'-deoxyribonucleoside 5'-triphosphate + H2O = [thioredoxin]-dithiol + a ribonucleoside 5'-triphosphate.","definition_xrefs":["RHEA:12701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor","termid":"GO:0016728"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ribonucleoside-triphosphate reductase (thioredoxin) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.17.4.2","MetaCyc:1.17.4.2-RXN"],"synonyms":[{"name":"2'-deoxyribonucleoside-triphosphate:oxidized-thioredoxin 2'-oxidoreductase activity","type":"related"},{"name":"2'-deoxyribonucleoside-triphosphate:thioredoxin-disulfide 2'-oxidoreductase activity","type":"related"},{"name":"ribonucleoside-triphosphate reductase activity","type":"exact"},{"name":"ribonucleotide reductase activity","type":"broad"}],"termid":"GO:0008998","terms_by_termid":{"GO:0008998":null}}


id: PBO:0076624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor E like","termid":"PBO:0076624"}


id: PBO:0039034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 11","termid":"PBO:0039034"}


id: PBO:0087480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromatin assembly factor I (CAF-1), with Rlf2p and Msi1p; chromatin assembly by CAF-1 is important for multiple processes including silencing at telomeres, mating type loci, and rDNA; maintenance of kinetochore structure, deactivation of the DNA damage checkpoint after DNA repair, chromatin dynamics during transcription; and repression of divergent transcription; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087480"}


id: GO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C3d product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"complement component C3d receptor activity","termid":"GO:0001860"}


id: PBO:0031082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_metabolism_phenotype","termid":"PBO:0031082"}


id: GO:0072062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the S1 cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"proximal convoluted tubule segment 1 development","termid":"GO:0072031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal convoluted tubule segment 1 cell differentiation","synonyms":[{"name":"S1 cell differentiation","type":"exact"}],"termid":"GO:0072062"}


id: PBO:0029544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_mixed_population_including_long_cells_(obsolete_FYPO:0002178)","termid":"PBO:0029544"}


id: GO:0032457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of membrane-bounded vesicles from peripheral endocytic compartments back to the plasma membrane where they are recycled for further rounds of transport.","definition_xrefs":["GOC:ecd","PMID:16473635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic recycling","termid":"GO:0032456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"fast endocytic recycling","synonyms":[{"name":"direct endocytic recycling","type":"exact"}],"termid":"GO:0032457"}


id: GO:1905402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of activated CD8-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905402"}


id: GO:0006589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of octopamine, 1-(p-hydroxyphenyl)-2-aminoethanol. The D enantiomer is about one-tenth as active as norepinephrine and is found in the salivary glands of Octopus and Eledone species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"octopamine metabolic process","termid":"GO:0046333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"octopamine biosynthetic process","synonyms":[{"name":"octopamine anabolism","type":"exact"},{"name":"octopamine biosynthesis","type":"exact"},{"name":"octopamine formation","type":"exact"},{"name":"octopamine synthesis","type":"exact"}],"termid":"GO:0006589"}


id: PBO:0057077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR155 host gene","termid":"PBO:0057077"}


id: PBO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase","termid":"PBO:0001668"}


id: GO:0090328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of olfactory learning. Olfactory learning is any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"olfactory learning","termid":"GO:0008355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olfactory learning","termid":"GO:0090328"}


id: GO:0106213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which outer kinetochore components delocalize from the centromere, contributing to the rearrangement of chromosomes into the orientation characteristic of meiotic prophase I.","definition_xrefs":["GOC:mah","PMID:27611693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"kinetochore disassembly involved in meiotic chromosome organization","synonyms":[{"name":"kinetochore disassembly from spindle pole body involved in chromosome organization involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0106213"}


id: PBO:0080111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urotensin 2B","termid":"PBO:0080111"}


id: GO:0010726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["GOC:hjd","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide metabolic process","termid":"GO:0010310"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species metabolic process","termid":"GO:2000379"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"positive regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010726"}


id: FYPO:0001198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular calcium level","synonyms":[{"name":"increased calcium accumulation","type":"related"},{"name":"increased cellular calcium ion level","type":"exact"},{"name":"increased cellular calcium level during mitotic cell cycle","type":"related"},{"name":"increased cellular calcium level during vegetative growth","type":"exact"}],"termid":"FYPO:0001198"}


id: GO:0097524
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane that is part of a sperm cell.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"sperm plasma membrane","termid":"GO:0097524"}


id: PBO:0029194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_kinetochore","termid":"PBO:0029194"}


id: FYPO:0000673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal septum assembly","synonyms":[{"name":"normal division septum assembly","type":"exact"},{"name":"normal septation","type":"broad"},{"name":"normal septum assembly during mitotic cell cycle","type":"related"},{"name":"normal septum assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0000673"}


id: PBO:0055199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2624","termid":"PBO:0055199"}


id: GO:0032555
data:
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id: PR:O74802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.09","secondary_identifiers":["UniProtKB:O74802"],"synonyms":[{"name":"3-hydroxyisobutyryl-coenzyme A hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HIB-CoA hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HIBYL-CoA-H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC2D10.09","type":"related"},{"name":"Spom972h-HIBCH","type":"exact"}],"termid":"PR:O74802"}


id: PBO:0113114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) localized protein; involved in ER-associated protein degradation (ERAD), ER stress, and homeostasis; acts as disaggregase that removes misfolded membrane protein aggregates; interacts with components of ERAD-L and ERAD-C and Cdc48p; derlin-like family member similar to Der1p","termid":"PBO:0113114"}


id: PBO:0069659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 936, pseudogene","termid":"PBO:0069659"}


id: GO:0002943
data:
  {"annotated_genes":["SJAG_03240","SJAG_00174","SJAG_01041","SJAG_03236"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60318,64322,65197,65198,85488,100803,105766,114590],"is_not":false,"summary":null,"term":"GO:0002943"}]},"cv_name":"biological_process","definition":"The process whereby a uridine in a transfer RNA is converted to dihydrouridine.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_01041":null,"SJAG_03236":null,"SJAG_03240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA dihydrouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0002943","terms_by_termid":{"GO:0002943":null}}


id: PBO:0063514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 2","termid":"PBO:0063514"}


id: GO:0070074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle that forms part of the apical complex; a small, threadlike structure located is close proximity to the subpellicular microtubules. Its contents include a rhomboid protease (PfROM1 in Plasmodium falciparum) that moves from the lateral asymmetric localization to the merozoite apical pole and the posterior pole upon release of merozoites from schizonts.","definition_xrefs":["PMID:18048320","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mononeme","termid":"GO:0070074"}


id: PBO:0056037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent transforming growth factor beta binding protein 2","termid":"PBO:0056037"}


id: GO:0097439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which tolerance to severe drying is acquired, before entering into a dry, either dormant or quiescent state.","definition_xrefs":["GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of desiccation tolerance","termid":"GO:0097439"}


id: MOD:00581
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one (18)O atom for one (16)O atom.","definition_xrefs":["OMSSA:87","Unimod:258","PubMed:11467524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O substituted residue","termid":"MOD:00845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O monosubstituted residue","synonyms":[{"name":"Label:18O(1)","type":"related"},{"name":"O18 Labeling","type":"related"},{"name":"ctermpepo18","type":"exact"}],"termid":"MOD:00581"}


id: FYPO:0002221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through the anaphase of meiosis II is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of meiotic cell cycle phase","termid":"FYPO:0002220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of meiotic anaphase II","synonyms":[{"name":"delayed meiotic anaphase II progression","type":"related"},{"name":"increased duration of meiotic anaphase II progression","type":"exact"},{"name":"prolonged meiotic anaphase II","type":"exact"}],"termid":"FYPO:0002221"}


id: PBO:0087427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit beta1 of the nascent polypeptide-associated complex (NAC); involved in protein targeting, associated with cytoplasmic ribosomes; enhances DNA binding of the Gal4p activator; homolog of human BTF3b; EGD1 has a paralog, BTT1, that arose from the whole genome duplication","termid":"PBO:0087427"}


id: CL:0002674
data:
  {"annotation_feature_type":"gene","cv_name":"cell","definition":"A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus.","definition_xrefs":["GOC:tfm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell","termid":"CL:0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H minus","termid":"CL:0002674"}


id: RO:0002104
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between a cell c and a protein complex or protein p if and only if that cell has as part a plasma_membrane[GO:0005886], and that plasma membrane has p as part.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_plasma_membrane_part","termid":"RO:0002104"}


id: FYPO:0000779
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is longer than normal and has an abnormal shape featuring a constriction at the center of the cell, corresponding to the cell division site. In some such cells, the diameter at the ends is much greater than in wild-type cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated aseptate vegetative cell","termid":"FYPO:0000950"},{"relation_name":"is_a","term_name":"elongated vegetative cell with central constriction","termid":"FYPO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000032","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"inviable elongated vegetative cell with central constriction","secondary_identifiers":["FYPO:0000018"],"synonyms":[{"name":"lethal; elongated vegetative cell with central constriction","type":"exact"},{"name":"cell morphology, elongated dumbbell","type":"related"},{"name":"cell morphology, long dumbbell","type":"related"},{"name":"elongated dumbbell morphology","type":"related"},{"name":"inviable elongated cell with central constriction during mitotic cell cycle","type":"related"},{"name":"inviable elongated cell with central constriction during vegetative growth","type":"exact"},{"name":"inviable elongated dumbbell-shaped vegetative cell","type":"related"},{"name":"inviable elongated swollen vegetative cell with constricted region at cell division site","type":"exact"}],"termid":"FYPO:0000779"}


id: PBO:0083951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of the translation initiation factor eIF2B; the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a negative regulator of GCN4 expression","termid":"PBO:0083951"}


id: FYPO:0001116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to oxidative stress","termid":"FYPO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"decreased RNA level during cellular response to H2O2","type":"exact"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"decreased transcript level during cellular response to hydrogen peroxide","type":"exact"},{"name":"reduced RNA level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001116"}


id: GO:0099533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the concentration of calcium ions in the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytosolic calcium ion concentration","termid":"GO:0007204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"}


id: PBO:0035818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_gene_conversion_during_vegetative_growth","termid":"PBO:0035818"}


id: PBO:0057733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1321","termid":"PBO:0057733"}


id: FYPO:0005197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased protein phosphorylation during glucose starvation","synonyms":[{"name":"increased protein phosphorylation during glucose depletion","type":"exact"},{"name":"increased protein phosphorylation during glucose deprivation","type":"exact"}],"termid":"FYPO:0005197"}


id: GO:0048357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the flower stem.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"pedicel mucilage metabolic process","termid":"GO:0048362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pedicel mucilage biosynthetic process","synonyms":[{"name":"pedicel mucilage anabolism","type":"exact"},{"name":"pedicel mucilage biosynthesis","type":"exact"},{"name":"pedicel mucilage formation","type":"exact"},{"name":"pedicel mucilage synthesis","type":"exact"}],"termid":"GO:0048357"}


id: PBO:0058989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT11 transcription factor 7 cofactor","termid":"PBO:0058989"}


id: PATO:0000829
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000829 absolute visual ability value (obsolete PATO:0000829)","termid":"PATO:0000829"}


id: PATO:0002226
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cylindrical shape quality inhering in a bearer by virtue of the bearer's being imperfectly cylindrical or approximately cylindrical.","direct_ancestors":[{"relation_name":"is_a","term_name":"cylindrical","termid":"PATO:0001873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subcylindrical","termid":"PATO:0002226"}


id: GO:1990397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces queuosine from derivatives of it, without de novo synthesis.","definition_xrefs":["PMID:24911101","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"queuosine biosynthetic process","termid":"GO:0008616"},{"relation_name":"is_a","term_name":"nucleoside salvage","termid":"GO:0043174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"queuosine salvage","termid":"GO:1990397"}


id: PBO:0036382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl3, DIPSY family","termid":"PBO:0036382"}


id: PR:O13982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An angio-associated migratory cell protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C25H1.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.08c","secondary_identifiers":["UniProtKB:O13982"],"synonyms":[{"name":"Spom972h-AAMP","type":"exact"}],"termid":"PR:O13982"}


id: GO:0035251
data:
  {"annotated_genes":["SJAG_02222","SJAG_00876","SJAG_01427","SJAG_01288","SJAG_00129","SJAG_05285","SJAG_04571","SJAG_01531","SJAG_03587","SJAG_00394"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102221,87620,90505,109320,111987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[89379,97144,92586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[111988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[107228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[109924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to an acceptor molecule.","definition_xrefs":["PMID:19858195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00394":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_04571":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"UDP-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1912353"],"termid":"GO:0035251","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004581":null,"GO:0140752":null}}


id: PBO:0074598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 10","termid":"PBO:0074598"}


id: PBO:0003405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate chain Dic1","termid":"PBO:0003405"}


id: GO:0046259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of trinitrotoluene, a methylated benzene molecule with three NO2 groups attached to it.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete trinitrotoluene biosynthetic process (obsolete GO:0046259)","synonyms":[{"name":"trinitrotoluene anabolism","type":"exact"},{"name":"trinitrotoluene biosynthesis","type":"exact"},{"name":"trinitrotoluene biosynthetic process","type":"exact"},{"name":"trinitrotoluene formation","type":"exact"},{"name":"trinitrotoluene synthesis","type":"exact"}],"termid":"GO:0046259"}


id: FYPO:0001414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sulfide (S2-). Cells stop growing (and may die) at a concentration of sulfide ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to sulfide","synonyms":[{"name":"hypersensitive to sulfide","type":"exact"},{"name":"sensitive to sulfide during mitotic cell cycle","type":"related"},{"name":"sensitive to sulfide during vegetative growth","type":"exact"},{"name":"sensitive to sulfide ions","type":"exact"},{"name":"sensitive to sulphide","type":"exact"}],"termid":"FYPO:0001414"}


id: PBO:0029635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_growth","termid":"PBO:0029635"}


id: PR:O94679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A condensin complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03605","PRO:DNx","PANTHER:PTHR14222:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.13","secondary_identifiers":["UniProtKB:O94679"],"synonyms":[{"name":"Spom972h-NCAPD2","type":"exact"},{"name":"XCAP-D2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p128 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:O94679"}


id: PBO:0057362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ae-2","termid":"PBO:0057362"}


id: PBO:0079377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 12","termid":"PBO:0079377"}


id: PBO:0075315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOCS6 pseudogene 1","termid":"PBO:0075315"}


id: PBO:0038656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 6, lysophosphatidic","termid":"PBO:0038656"}


id: PBO:0087652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterohexameric cochaperone prefoldin complex; complex binds specifically to cytosolic chaperonin and transfers target proteins to it","termid":"PBO:0087652"}


id: PBO:0049474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme K","termid":"PBO:0049474"}


id: PBO:0018075
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae DCP1","termid":"PBO:0018075"}


id: PBO:0057169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320e","termid":"PBO:0057169"}


id: PBO:0060155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 3 (pseudogene)","termid":"PBO:0060155"}


id: GO:0032002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-28 and interleukin-29. It is composed of an alpha and a beta receptor subunit (in human IFNLR1/IL28Ralpha & IL10RB) and either Interleukin-28 (IFNL2 or IFNL3) or Interleukin-29 (IFNL1).","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"interleukin-28 receptor complex","synonyms":[{"name":"IL-28 receptor complex","type":"exact"}],"termid":"GO:0032002"}


id: PBO:0091194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser","termid":"PBO:0091194"}


id: PBO:0088710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2457 family conserved fungal protein","termid":"PBO:0088710"}


id: PBO:0059220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 2B","termid":"PBO:0059220"}


id: PBO:0114485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial repliratory complex assembly factro/arginine methyltransferase, human NDUFAF7 ortholog","termid":"PBO:0114485"}


id: PBO:0059562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1F","termid":"PBO:0059562"}


id: PBO:0066154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP6 pseudogene 1","termid":"PBO:0066154"}


id: GO:0033749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the methyl group from a modified arginine residue at position 3 of the histone H4 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H4 demethylase activity","termid":"GO:0141058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0032452","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"histone H4R3 demethylase activity","synonyms":[{"name":"histone H4-methyl-arginine-3 demethylase activity","type":"exact"},{"name":"histone H4R3me demethylase activity","type":"exact"},{"name":"histone demethylase activity (H4-R3 specific)","type":"exact"}],"termid":"GO:0033749"}


id: PBO:0040962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 33","termid":"PBO:0040962"}


id: PBO:0005600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase-lipase family protein","termid":"PBO:0005600"}


id: PBO:0069135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 386, pseudogene","termid":"PBO:0069135"}


id: PBO:0030477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_serine_level","termid":"PBO:0030477"}


id: PR:Q9P7K3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized kinase C24B10.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.02c","synonyms":[{"name":"Spom972h-SPCC24B10.02c","type":"exact"}],"termid":"PR:Q9P7K3"}


id: GO:0004728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.","definition_xrefs":["EC:3.1.3.48"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer, downstream of receptor, with protein tyrosine phosphatase activity (obsolete GO:0004728)","synonyms":[{"name":"receptor signaling protein tyrosine phosphatase activity","type":"exact"},{"name":"receptor signalling protein tyrosine phosphatase activity","type":"exact"}],"termid":"GO:0004728"}


id: PBO:0083926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fumarase; converts fumaric acid to L-malic acid in the TCA cycle; cytosolic and mitochondrial distribution determined by the N-terminal targeting sequence, protein conformation, and status of glyoxylate shunt; phosphorylated in mitochondria","termid":"PBO:0083926"}


id: PBO:0075919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 11","termid":"PBO:0075919"}


id: GO:0005362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose(out) + Na+(out) = D-glucose(in) + Na+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose:sodium symporter activity","termid":"GO:0005412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"low-affinity D-glucose:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-429567"],"synonyms":[{"name":"low-affinity glucose-sodium cotransporter activity","type":"broad"},{"name":"low-affinity glucose:sodium symporter activity","type":"exact"}],"termid":"GO:0005362"}


id: PBO:0072219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 2","termid":"PBO:0072219"}


id: GO:0045898
data:
  {"annotated_genes":["SJAG_01771","SJAG_00766"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85741,111349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of RNA polymerase II transcriptional preinitiation complex assembly.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"regulates","term_name":"RNA polymerase II preinitiation complex assembly","termid":"GO:0051123"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00766":null,"SJAG_01771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0044085","GO:0006351","GO:0006355","GO:0065003"],"is_obsolete":false,"name":"regulation of RNA polymerase II transcription preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of RNA polymerase II transcriptional pre-initiation complex assembly","type":"exact"},{"name":"regulation of RNA polymerase II transcriptional pre-initiation complex biosynthesis","type":"exact"},{"name":"regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"regulation of RNA polymerase II transcriptional preinitiation complex formation","type":"related"}],"termid":"GO:0045898","terms_by_termid":{"GO:0045899":null}}


id: PBO:0050521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D9","termid":"PBO:0050521"}


id: GO:0030315
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane.","definition_xrefs":["ISBN:0815316194","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcolemma","termid":"GO:0042383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"T-tubule","secondary_identifiers":["Wikipedia:T-tubule"],"synonyms":[{"name":"transverse tubule","type":"exact"},{"name":"triad","type":"related"}],"termid":"GO:0030315"}


id: PBO:0059283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L40 pseudogene 1","termid":"PBO:0059283"}


id: PBO:0087898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; involved in cell-type-specific transcription and pheromone response; plays a central role in the formation of both repressor and activator complexes; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087898"}


id: PR:Q874R1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q874R1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.04","synonyms":[{"name":"Spom972h-rho4","type":"exact"}],"termid":"PR:Q874R1"}


id: PBO:0057590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 892c","termid":"PBO:0057590"}


id: GO:0044857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of plasma membrane rafts.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft organization","termid":"GO:0031579"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane raft organization","termid":"GO:0044857"}


id: PBO:0030255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_during_vegetative_growth","termid":"PBO:0030255"}


id: GO:2000984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP citrate synthase activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of ATP citrate synthase activity","termid":"GO:2000983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ATP citrate synthase activity","synonyms":[{"name":"negative regulation of ATP citrate (pro-S)-lyase activity","type":"exact"},{"name":"negative regulation of ATP-citrate (pro-S)-lyase activity","type":"exact"},{"name":"negative regulation of ATP-citrate (pro-S-)-lyase activity","type":"exact"},{"name":"negative regulation of ATP-citric lyase activity","type":"exact"},{"name":"negative regulation of ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity","type":"exact"},{"name":"negative regulation of ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating)","type":"related"},{"name":"negative regulation of acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]","type":"related"},{"name":"negative regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity","type":"exact"},{"name":"negative regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating)","type":"exact"},{"name":"negative regulation of adenosine triphosphate citrate lyase activity","type":"exact"},{"name":"negative regulation of citrate cleavage enzyme activity","type":"related"},{"name":"negative regulation of citrate-ATP lyase activity","type":"exact"},{"name":"negative regulation of citric cleavage enzyme activity","type":"related"}],"termid":"GO:2000984"}


id: PR:Q9P4W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps403 gene.","definition_xrefs":["UniProtKB:Q9P4W9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.07","synonyms":[{"name":"Spom972h-rps403","type":"exact"}],"termid":"PR:Q9P4W9"}


id: GO:0040040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior that is dependent upon the sensation of temperature.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermosensory behavior","synonyms":[{"name":"behavioral response to temperature stimulus","type":"exact"},{"name":"behavioural response to temperature stimulus","type":"exact"},{"name":"thermosensory behaviour","type":"exact"}],"termid":"GO:0040040"}


id: GO:0097097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nasal suture is generated and organized.","definition_xrefs":["GOC:sl","GOC:pr","Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system","Wikipedia:Cranial_sutures"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial suture morphogenesis","termid":"GO:0097096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nasal suture morphogenesis","synonyms":[{"name":"internasal suture morphogenesis","type":"exact"}],"termid":"GO:0097097"}


id: GO:0021955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process from a neuron whose cell body resides in the central nervous system. The process carries efferent (outgoing) action potentials from the cell body towards target cells.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonogenesis","termid":"GO:0007409"},{"relation_name":"part_of","term_name":"central nervous system neuron development","termid":"GO:0021954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system neuron axonogenesis","termid":"GO:0021955"}


id: PBO:0045959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR antisense RNA 1","termid":"PBO:0045959"}


id: PATO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female receptivity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female receptivity","termid":"PATO:0001720"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased female receptivity","synonyms":[{"name":"high female receptivity","type":"exact"}],"termid":"PATO:0001723"}


id: PBO:0041223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 pseudogene 3","termid":"PBO:0041223"}


id: PBO:0024480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITH domain-containing protein","termid":"PBO:0024480"}


id: GO:0004760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + pyruvate = 3-hydroxypyruvate + L-alanine.","definition_xrefs":["EC:2.6.1.51","RHEA:22852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-serine-pyruvate transaminase activity","secondary_identifiers":["GO:0004762","KEGG_REACTION:R00585","MetaCyc:SERINE--PYRUVATE-AMINOTRANSFERASE-RXN","GO:0004761","GO:0004763"],"synonyms":[{"name":"L-serine:pyruvate aminotransferase activity","type":"related"},{"name":"SPT","type":"related"},{"name":"hydroxypyruvate:L-alanine transaminase activity","type":"related"},{"name":"serine--pyruvate aminotransferase activity","type":"related"},{"name":"serine-pyruvate aminotransferase activity","type":"exact"},{"name":"serine-pyruvate aminotransferase, type 1","type":"narrow"},{"name":"serine-pyruvate aminotransferase, type 2A","type":"narrow"},{"name":"serine-pyruvate aminotransferase, type 2B","type":"narrow"}],"termid":"GO:0004760"}


id: FYPO:0003530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type). The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000298","FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"normal intra-S DNA damage checkpoint","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0003530"}


id: GO:0050730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"}


id: PBO:0029309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spheroid_cell","termid":"PBO:0029309"}


id: MOD:00451
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a propanoyl group.","definition_xrefs":["Unimod:58#N-term","PubMed:11999733","PubMed:12175151","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propanoylated residue","termid":"MOD:01894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"alpha-amino propanoylated residue","synonyms":[{"name":"Propionate labeling reagent light form (N-term & K)","type":"related"},{"name":"Propionyl","type":"related"}],"termid":"MOD:00451"}


id: GO:0006197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate deaminase reaction (obsolete GO:0006197)","synonyms":[{"name":"adenylate deaminase reaction","type":"exact"}],"termid":"GO:0006197"}


id: PBO:0091455
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptide TRNA Hydrolase","termid":"PBO:0091455"}


id: PBO:0047890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(6)(q13)","termid":"PBO:0047890"}


id: GO:0052035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of the inflammatory response of the host organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host inflammatory response (obsolete GO:0052035)","synonyms":[{"name":"activation by symbiont of host inflammatory response","type":"narrow"},{"name":"positive regulation by organism of inflammatory response of other organism involved in symbiotic interaction","type":"broad"},{"name":"stimulation by symbiont of host inflammatory response","type":"narrow"},{"name":"up regulation by symbiont of host inflammatory response","type":"exact"},{"name":"up-regulation by symbiont of host inflammatory response","type":"exact"},{"name":"upregulation by symbiont of host inflammatory response","type":"exact"}],"termid":"GO:0052035"}


id: GO:0018535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotine + acceptor + H2O = (S)-6-hydroxynicotine + reduced acceptor.","definition_xrefs":["EC:1.5.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"nicotine dehydrogenase activity","secondary_identifiers":["RHEA:14769","MetaCyc:NICOTINE-DEHYDROGENASE-RXN","UM-BBD_enzymeID:r0979","UM-BBD_enzymeID:r0978"],"synonyms":[{"name":"D-nicotine oxidase activity","type":"related"},{"name":"nicotine oxidase activity","type":"related"},{"name":"nicotine:(acceptor) 6-oxidoreductase (hydroxylating)","type":"related"},{"name":"nicotine:acceptor 6-oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0018535"}


id: PBO:0059351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S15 pseudogene 2","termid":"PBO:0059351"}


id: GO:1901350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cell-cell signaling that is involved in cell-cell junction organization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling involved in cell-cell junction organization (obsolete GO:1901350)","synonyms":[{"name":"cell-cell signaling involved in cell-cell junction assembly and maintenance","type":"exact"},{"name":"cell-cell signaling involved in cell-cell junction biogenesis","type":"related"},{"name":"cell-cell signaling involved in cell-cell junction organisation","type":"exact"},{"name":"cell-cell signaling involved in intercellular junction assembly and maintenance","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction assembly and maintenance","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction biogenesis","type":"related"},{"name":"cell-cell signalling involved in cell-cell junction organisation","type":"exact"},{"name":"cell-cell signalling involved in cell-cell junction organization","type":"exact"},{"name":"cell-cell signalling involved in intercellular junction assembly and maintenance","type":"exact"}],"termid":"GO:1901350"}


id: PBO:0004423
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ace2 target genes","termid":"PBO:0004423"}


id: PBO:0086388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cell wall mannoprotein; member of the Srp1p/Tip1p family of serine-alanine-rich proteins; transcription is induced by cold shock and anaerobiosis; TIR2 has a paralog, TIR3, that arose from the whole genome duplication","termid":"PBO:0086388"}


id: SO:0001706
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 4th residue (a lysine), from the start of the H3 protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K4_methylation_site","termid":"SO:0001734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K4_trimethylation","synonyms":[{"name":"H3K4 tri-methylation","type":"exact"},{"name":"H3K4me3","type":"related"}],"termid":"SO:0001706"}


id: GO:1904080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in neuron fate specification.","definition_xrefs":["GO_REF:0000060","GOC:kmv","GOC:TermGenie","PMID:11959845"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in neuron fate specification (obsolete GO:1904080)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in neuron fate specification","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in neuron fate specification","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global involved in neuron fate specification","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"}],"termid":"GO:1904080"}


id: PBO:0075232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 5 pseudogene 2","termid":"PBO:0075232"}


id: PBO:0030538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level_during_glucose_starvation","termid":"PBO:0030538"}


id: GO:0060039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery.","definition_xrefs":["PMID:16376438","GOC:dph","GOC:rph","PMID:15138308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericardium development","termid":"GO:0060039"}


id: GO:0004506
data:
  {"annotated_genes":["SJAG_00370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107958],"is_not":false,"summary":null,"term":"GO:0004506"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + squalene = (S)-2,3-epoxysqualene + H2O + NADP+.","definition_xrefs":["RHEA:25282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"squalene monooxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02874","EC:1.14.14.17","Reactome:R-HSA-191299","MetaCyc:SQUALENE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"squalene 2,3-oxidocyclase activity","type":"related"},{"name":"squalene epoxidase activity","type":"related"},{"name":"squalene hydroxylase activity","type":"related"},{"name":"squalene oxydocyclase activity","type":"related"},{"name":"squalene,NADPH:oxygen oxidoreductase (2,3-epoxidizing) activity","type":"exact"},{"name":"squalene-2,3-epoxidase activity","type":"related"},{"name":"squalene-2,3-epoxide cyclase activity","type":"related"}],"termid":"GO:0004506","terms_by_termid":{"GO:0004506":null}}


id: PR:O13804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17H9.07 gene.","definition_xrefs":["UniProtKB:O13804","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17H9.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.07","synonyms":[{"name":"Spom972h-SPAC17H9.07","type":"exact"}],"termid":"PR:O13804"}


id: PBO:0051328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-19 (pseudogene)","termid":"PBO:0051328"}


id: PR:O13862
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- deb1 gene.","definition_xrefs":["UniProtKB:O13862","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator protein rdp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B1.01","synonyms":[{"name":"Spom972h-deb1","type":"exact"},{"name":"rhp51-DRE-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13862"}


id: PBO:0088075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease that cleaves ubiquitin-protein fusions; involved in cell cycle progression through S phase; UBP7 has a paralog, UBP11, that arose from the whole genome duplication","termid":"PBO:0088075"}


id: GO:0009759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of indole glucosinolates, sulfur-containing compounds that have a common structure linked to an R group derived from tryptophan.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"},{"relation_name":"is_a","term_name":"indole glucosinolate metabolic process","termid":"GO:0042343"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"indole glucosinolate biosynthetic process","synonyms":[{"name":"indole glucosinolate anabolism","type":"exact"},{"name":"indole glucosinolate biosynthesis","type":"exact"},{"name":"indole glucosinolate formation","type":"exact"},{"name":"indole glucosinolate synthesis","type":"exact"}],"termid":"GO:0009759"}


id: GO:0044679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which catalyzes the conversion of methanophenazine and hydrogen to form dihydromethanophenazine. This typically consists of three polypeptides.","definition_xrefs":["GOC:mengo_curators","PMID:9555882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methanophenazine reducing hydrogenase complex","termid":"GO:0044679"}


id: PBO:0067212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 278, pseudogene","termid":"PBO:0067212"}


id: PBO:0049588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 6","termid":"PBO:0049588"}


id: MOD:01296
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to monosodium L-glutamate.","definition_xrefs":["PubMed:12216740","Unimod:30#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosodium salt","termid":"MOD:00423"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium L-glutamate","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"MSG","type":"exact"},{"name":"Na1Glu","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:01296"}


id: GO:0030174
data:
  {"annotated_genes":["SJAG_03048","SJAG_02074","SJAG_00364","SJAG_03720","SJAG_04671","SJAG_03438","SJAG_01210","SJAG_02162","SJAG_03160","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98464,105022,93840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[108186,99428,113451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[85093,102732,112406,98470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[95440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903466"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of initiation of DNA-dependent DNA replication; the process in which DNA becomes competent to replicate. In eukaryotes, replication competence is established in early G1 and lost during the ensuing S phase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"regulates","term_name":"DNA replication initiation","termid":"GO:0006270"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01210":null,"SJAG_02074":null,"SJAG_02162":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"regulation of DNA-templated DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication licencing","type":"exact"},{"name":"DNA replication licensing","type":"exact"},{"name":"regulation of DNA replication initiation","type":"broad"},{"name":"regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"GO:0030174","terms_by_termid":{"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: GO:0097104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a postsynaptic membrane, a specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft).","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:21424692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic membrane organization","termid":"GO:0001941"},{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"part_of","term_name":"postsynapse assembly","termid":"GO:0099068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0061024"],"is_obsolete":false,"name":"postsynaptic membrane assembly","synonyms":[{"name":"post-synaptic membrane assembly","type":"exact"}],"termid":"GO:0097104"}


id: PBO:0070420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase","termid":"PBO:0070420"}


id: PBO:0054916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2330","termid":"PBO:0054916"}


id: GO:1990817
data:
  {"annotated_genes":["SJAG_04946","SJAG_00797","SJAG_03257","SJAG_02720","SJAG_01176","SJAG_02370","SJAG_02725","SJAG_02383"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67974,84417,87695,92311,96178,99944,107445,114160],"is_not":false,"summary":null,"term":"GO:1990817"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA(n) = diphosphate + RNA(n)-3'-adenine ribonucleotide. The primer may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group.","definition_xrefs":["PMID:13965521","RHEA:11332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01176":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02720":null,"SJAG_02725":null,"SJAG_03257":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"poly(A) RNA polymerase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN","Reactome:R-HSA-72185","EC:2.7.7.19","Reactome:R-HSA-9833031"],"synonyms":[{"name":"NTP polymerase activity","type":"broad"},{"name":"RNA adenylating enzyme","type":"exact"},{"name":"RNA adenyltransferase activity","type":"exact"},{"name":"RNA adenylyltransferase activity","type":"exact"},{"name":"poly(A) polymerase activity","type":"related"},{"name":"polynucleotide adenylyltransferase activity","type":"exact"}],"termid":"GO:1990817","terms_by_termid":{"GO:1990817":null}}


id: PBO:0003392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl reductase (predicted)","termid":"PBO:0003392"}


id: GO:0032896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + AH2 + O2 = palmitoleic acid (16:1delta9) + A + 2 H2O.","definition_xrefs":["GOC:kmv","PMID:16443825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"palmitoyl-CoA 9-desaturase activity","synonyms":[{"name":"palmitoyl-CoA delta9-desaturase activity","type":"exact"}],"termid":"GO:0032896"}


id: PBO:0048414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 3","termid":"PBO:0048414"}


id: PBO:0091585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga9","termid":"PBO:0091585"}


id: PBO:0004662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase epsilon subunit (predicted)","termid":"PBO:0004662"}


id: PBO:0087045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L21A; homologous to mammalian ribosomal protein L21, no bacterial homolog; RPL21A has a paralog, RPL21B, that arose from the whole genome duplication","termid":"PBO:0087045"}


id: PBO:0054737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2146","termid":"PBO:0054737"}


id: GO:0039707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components by a virus to form a pore complex in a membrane of a host organism.","definition_xrefs":["GOC:jl","PMID:12972148","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete virus-mediated pore formation in host cell membrane (obsolete GO:0039707)","synonyms":[{"name":"pore formation by virus in membrane of host cell","type":"exact"},{"name":"pore formation in membrane of host cell by virus","type":"exact"},{"name":"viroporin","type":"related"}],"termid":"GO:0039707"}


id: GO:0030568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the serine endopeptidase plasmin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete plasmin inhibitor activity (obsolete GO:0030568)","synonyms":[{"name":"plasmin inhibitor activity","type":"exact"}],"termid":"GO:0030568"}


id: SO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with a minus 1 frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"minus_1_frameshift","termid":"SO:0000866"},{"relation_name":"is_a","term_name":"mRNA_with_frameshift","termid":"SO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_minus_1_frameshift","synonyms":[{"name":"mRNA with minus 1 frameshift","type":"exact"}],"termid":"SO:0000282"}


id: PBO:0081601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 525","termid":"PBO:0081601"}


id: GO:0062078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a TSC1-TSC2 complex.","definition_xrefs":["PMID:28561066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TSC1-TSC2 complex binding","synonyms":[{"name":"tuberin sclerosis complex binding","type":"exact"},{"name":"tuberin-hamartin complex binding","type":"exact"}],"termid":"GO:0062078"}


id: PBO:0081813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 6, Y-linked","termid":"PBO:0081813"}


id: FYPO:0007069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which assembly of the ribosomal small subunit is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal ribosomal small subunit assembly","synonyms":[{"name":"abnormal 40S preribosome assembly","type":"narrow"},{"name":"abnormal 40S ribosomal subunit assembly","type":"narrow"},{"name":"abnormal pre-40S ribosome assembly","type":"narrow"},{"name":"abnormal ribosomal small subunit assembly during mitotic cell cycle","type":"related"},{"name":"abnormal ribosomal small subunit assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007069"}


id: SO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA generally longer than 200 nucleotides that cannot be classified as any other ncRNA subtype. Similar to mRNAs, lncRNAs are mainly transcribed by RNA polymerase II, are often capped by 7-methyl guanosine at their 5' ends, polyadenylated at their 3' ends and may be spliced.","definition_xrefs":["HGNC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA","secondary_identifiers":["http://www.gencodegenes.org/gencode_biotypes.html"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:lncRNA","type":"exact"},{"name":"lncRNA_transcript","type":"exact"},{"name":"long non-coding RNA","type":"exact"}],"termid":"SO:0001877"}


id: GO:2000210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anoikis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of anoikis","termid":"GO:2000209"},{"relation_name":"positively_regulates","term_name":"anoikis","termid":"GO:0043276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anoikis","synonyms":[{"name":"positive regulation of detachment induced cell death","type":"exact"},{"name":"positive regulation of suspension induced apoptosis","type":"exact"}],"termid":"GO:2000210"}


id: PBO:0078917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 6-1","termid":"PBO:0078917"}


id: PBO:0046246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL2 antisense RNA 1","termid":"PBO:0046246"}


id: PBO:0029893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_phleomycin","termid":"PBO:0029893"}


id: MOD:01008
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a benzyl (phenylmethyl) group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}


id: PBO:0064626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase 2","termid":"PBO:0064626"}


id: PBO:0047267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 246 member B","termid":"PBO:0047267"}


id: PBO:0072420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 25","termid":"PBO:0072420"}


id: GO:0000073
data:
  {"annotated_genes":["SJAG_00773","SJAG_00794","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74498,90809,91357],"is_not":false,"summary":null,"term":"GO:0000073"}]},"cv_name":"biological_process","definition":"The release of duplicated mitotic spindle pole bodies (SPBs) that begins with the nucleation of microtubules from each SPB within the nucleus, leading to V-shaped spindle microtubules. Interpolar microtubules that elongate from each pole are interconnected, forming overlapping microtubules. Capturing and antiparallel sliding apart of microtubules promotes the initial separation of the SPB.","definition_xrefs":["GOC:vw","GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body separation","termid":"GO:0110100"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"},{"relation_name":"part_of","term_name":"mitotic spindle pole body organization","termid":"GO:1905047"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0007049","GO:0000070","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"initial mitotic spindle pole body separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030475"],"termid":"GO:0000073","terms_by_termid":{"GO:0000073":null}}


id: PBO:0046324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 2","termid":"PBO:0046324"}


id: FYPO:0005569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the establishment or maintenance of cell polarity is abnormal when the cell undergoes transition from G0 phase to G1.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell polarity","termid":"FYPO:0005568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0005568"],"is_obsolete":false,"name":"abnormal cell polarity during G0 to G1 transition","synonyms":[{"name":"abnormal cell polarity during cell cycle re-entry","type":"exact"},{"name":"abnormal cell polarity during cell quiescence to G1 transition","type":"exact"},{"name":"abnormal cell polarity during exit from cell quiescence","type":"exact"},{"name":"abnormal cell polarity during quiescence to G1 transition","type":"exact"},{"name":"abnormal cell polarity during recovery from quiescence","type":"exact"},{"name":"abnormal cell polarity process during G0 to G1 transition","type":"exact"},{"name":"abnormal establishment or maintenance of cell polarity during G0 to G1 transition","type":"exact"},{"name":"cell polarity defects during G0 to G1 transition","type":"exact"}],"termid":"FYPO:0005569"}


id: PBO:0070684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 55","termid":"PBO:0070684"}


id: PBO:0048300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase","termid":"PBO:0048300"}


id: PBO:0038719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 14","termid":"PBO:0038719"}


id: GO:0043401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by a steroid hormone binding to a receptor.","definition_xrefs":["PMID:12606724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"steroid hormone receptor signaling pathway","synonyms":[{"name":"steroid hormone mediated signalling","type":"exact"},{"name":"steroid hormone-mediated signaling pathway","type":"exact"}],"termid":"GO:0043401"}


id: PBO:0046532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERBB receptor feedback inhibitor 1","termid":"PBO:0046532"}


id: PBO:0068611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 62, pseudogene","termid":"PBO:0068611"}


id: PBO:0046271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 10","termid":"PBO:0046271"}


id: PBO:0085836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and endoplasmic reticulum","termid":"PBO:0085836"}


id: FYECO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing glycerol as the sole carbon source, yeast extract and other components. The concentration of glycerol is typically around 2-3% and supplemented with trace amounts of another carbon source (e.g. glucose).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol YE","secondary_identifiers":["FYECO:0000083"],"synonyms":[{"name":"glycerol rich medium","type":"broad"},{"name":"glycerol sole carbon source YE","type":"related"},{"name":"glycerol sole carbon source rich medium","type":"exact"},{"name":"non-fermentable glycerol sole carbon source rich medium","type":"exact"},{"name":"nonfermentable glycerol sole carbon source rich medium","type":"related"}],"termid":"FYECO:0000138"}


id: GO:0005912
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction composed of the epithelial cadherin-catenin complex. The epithelial cadherins, or E-cadherins, of each interacting cell extend through the plasma membrane into the extracellular space and bind to each other. The E-cadherins bind to catenins on the cytoplasmic side of the membrane, where the E-cadherin-catenin complex binds to cytoskeletal components and regulatory and signaling molecules.","definition_xrefs":["PMID:20571587","GOC:aruk","PMID:28096264","GOC:mah","GOC:bc","PMID:17854762","PMID:21422226","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"adherens junction","secondary_identifiers":["GO:0005913","Wikipedia:Adherens_junction"],"synonyms":[{"name":"cell-cell adherens junction","type":"exact"}],"termid":"GO:0005912"}


id: PBO:0029259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029259"}


id: PBO:0076792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin epsilon and delta complex 2","termid":"PBO:0076792"}


id: GO:0019940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete SUMO-dependent protein catabolic process (obsolete GO:0019940)","synonyms":[{"name":"SUMO-dependent protein breakdown","type":"exact"},{"name":"SUMO-dependent protein catabolic process","type":"exact"},{"name":"SUMO-dependent protein catabolism","type":"exact"},{"name":"SUMO-dependent protein degradation","type":"exact"}],"termid":"GO:0019940"}


id: PBO:0000037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase interaction types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_genetically","termid":"PBO:0000037"}


id: PBO:0074324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ArfGAP2","termid":"PBO:0074324"}


id: GO:0045976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the embryonic mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"negatively_regulates","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic cell cycle, embryonic","synonyms":[{"name":"down regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through embryonic mitotic cell cycle","type":"narrow"},{"name":"negative regulation of embryonic mitotic cell cycle","type":"exact"},{"name":"negative regulation of embryonic mitotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through embryonic mitotic cell cycle","type":"exact"}],"termid":"GO:0045976"}


id: GO:1904942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac ventricle formation.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","PMID:23575307","GO_REF:0000058","GOC:bc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"regulates","term_name":"cardiac ventricle formation","termid":"GO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac ventricle formation","termid":"GO:1904942"}


id: PBO:0079924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URB1 antisense RNA 1 (head to head)","termid":"PBO:0079924"}


id: PBO:0057203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 374b","termid":"PBO:0057203"}


id: GO:0019159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-nicotinamide D-ribonucleotide + H2O = beta-nicotinate D-ribonucleotide + NH3.","definition_xrefs":["EC:3.5.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"nicotinamide-nucleotide amidase activity","secondary_identifiers":["MetaCyc:NMNAMIDOHYDRO-RXN","RHEA:12400"],"synonyms":[{"name":"NMN amidohydrolase","type":"narrow"},{"name":"NMN deamidase activity","type":"related"},{"name":"nicotinamide mononucleotide amidohydrolase activity","type":"related"},{"name":"nicotinamide mononucleotide deamidase activity","type":"related"},{"name":"nicotinamide-D-ribonucleotide amidohydrolase activity","type":"related"}],"termid":"GO:0019159"}


id: GO:0018877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-1,2,3,4,5,6-hexachlorocyclohexane, a halogenated organic insecticide that has been used worldwide for agriculture and public health.","definition_xrefs":["UM-BBD_pathwayID:hch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexachlorocyclohexane metabolic process","termid":"GO:0019497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-1,2,3,4,5,6-hexachlorocyclohexane metabolic process","synonyms":[{"name":"beta-1,2,3,4,5,6-hexachlorocyclohexane metabolism","type":"exact"}],"termid":"GO:0018877"}


id: GO:0034134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 2.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 2 signaling pathway","synonyms":[{"name":"TLR2 signaling pathway","type":"exact"},{"name":"toll-like receptor 2 signalling pathway","type":"exact"}],"termid":"GO:0034134"}


id: PBO:0065653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRD divergent transcript","termid":"PBO:0065653"}


id: PBO:0028743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0028743"}


id: GO:0061079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the left horn of the sinus venosus from its initial formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"sinus venosus development","termid":"GO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left horn of sinus venosus development","termid":"GO:0061079"}


id: GO:0050623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-canadine + 2 NADP+ = berberine + H+ + 2 NADPH.","definition_xrefs":["EC:1.5.1.31","RHEA:21268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"berberine reductase activity","secondary_identifiers":["KEGG_REACTION:R07169","MetaCyc:1.5.1.31-RXN"],"synonyms":[{"name":"(R)-canadine synthase activity","type":"related"},{"name":"(R)-tetrahydroberberine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050623"}


id: PBO:0045577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase","termid":"PBO:0045577"}


id: SO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from nuclear sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"nuclear_sequence","termid":"SO:0000738"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear_gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Nuclear_gene"],"synonyms":[{"name":"nuclear gene","type":"exact"}],"termid":"SO:0000087"}


id: PATO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A broken quality inhering in a bearer by virtue of the bearer's being broken into multiple contiguous wholes.","definition_xrefs":["PATOC:GJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"broken","termid":"PATO:0001444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shattered","termid":"PATO:0002081"}


id: GO:0034673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of inhibin, type III transforming growth factor beta receptor (also known as betaglycan), and the type II activin receptor ActRII. The complex is thought to negatively regulate the activity of activin B.","definition_xrefs":["GOC:BHF","PMID:10746731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"inhibin-betaglycan-ActRII complex","termid":"GO:0034673"}


id: PBO:0039790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAF pseudogene 1","termid":"PBO:0039790"}


id: PBO:0036261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAMP complex ATP-dependent RNA helicase subunit Mtr4","termid":"PBO:0036261"}


id: PBO:0070125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 39 pseudogene","termid":"PBO:0070125"}


id: PBO:0083955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger protein; negatively regulates nitrogen catabolic gene expression by competing with Gat1p for GATA site binding; function requires a repressive carbon source; dimerizes with Dal80p and binds to Tor1p; GZF3 has a paralog, DAL80, that arose from the whole genome duplication","termid":"PBO:0083955"}


id: PBO:0061393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin/nucleoplasmin 2","termid":"PBO:0061393"}


id: GO:0042336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Synthesis and deposition of a protein-based noncellular, hardened, or membranous secretion from an epithelial sheet, occurring as part of the molting cycle. Examples of this process are found in invertebrate species.","definition_xrefs":["GOC:dph","GOC:mtg_sensu","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cuticle development involved in protein-based cuticle molting cycle (obsolete GO:0042336)","synonyms":[{"name":"cuticle anabolism during molting","type":"broad"},{"name":"cuticle biosynthetic process during molting","type":"broad"},{"name":"cuticle development involved in protein-based cuticle molting cycle","type":"exact"},{"name":"cuticle formation during molting","type":"broad"},{"name":"cuticle synthesis during molting","type":"broad"}],"termid":"GO:0042336"}


id: PBO:0040070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin beta 1","termid":"PBO:0040070"}


id: GO:0038159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a the C-X-C chemokine type 4 receptor on the surface of a cell binding to one of it's physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"C-X-C chemokine receptor CXCR4 signaling pathway","synonyms":[{"name":"CXCR4 signaling pathway","type":"exact"}],"termid":"GO:0038159"}


id: GO:1901572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving chemical substance.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical substance metabolic process (obsolete GO:1901572)","synonyms":[{"name":"chemical substance metabolic process","type":"exact"},{"name":"chemical substance metabolism","type":"exact"}],"termid":"GO:1901572"}


id: PBO:0087608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres","termid":"PBO:0087608"}


id: GO:0072595
data:
  {"annotated_genes":["SJAG_01001"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"}]},"cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location a specific location on or in an organelle, and is prevented from moving elsewhere. Encompasses establishment of localization in the membrane or lumen of a membrane-bounded organelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"},{"relation_name":"part_of","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein localization in organelle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of protein localisation to organelle","type":"exact"},{"name":"maintenance of protein localization to organelle","type":"exact"}],"termid":"GO:0072595","terms_by_termid":{"GO:0006621":null}}


id: PBO:0053106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer immune cell infiltration associated lncRNA","termid":"PBO:0053106"}


id: PR:Q9P7M0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized aarF domain-containing protein kinase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03860","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 family protein C21C3.03, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.03","secondary_identifiers":["UniProtKB:Q9P7M0"],"synonyms":[{"name":"Spom972h-ADCK2","type":"exact"}],"termid":"PR:Q9P7M0"}


id: PBO:0028593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_heat","termid":"PBO:0028593"}


id: GO:0071329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sucrose","termid":"GO:0009744"},{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sucrose stimulus","termid":"GO:0071329"}


id: PR:O94704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iec3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.04","synonyms":[{"name":"Spom972h-iec3","type":"exact"}],"termid":"PR:O94704"}


id: GO:0072052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"juxtaglomerular apparatus development","termid":"GO:0072051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"}


id: PBO:0049980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIKESHI pseudogene 1","termid":"PBO:0049980"}


id: GO:0010492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of shoot apical meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:dph","GOC:tb","PMID:17461786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of shoot apical meristem identity","termid":"GO:0010492"}


id: SO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of peptide sequence used to target the polypeptide molecule to a specific organelle.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"peptide_localization_signal","synonyms":[{"name":"localization signal","type":"related"},{"name":"peptide localization signal","type":"exact"}],"termid":"SO:0001527"}


id: PBO:0084469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKKK acting in the protein kinase C signaling pathway; the kinase C signaling pathway controls cell integrity; upon activation by Pkc1p phosphorylates downstream kinases Mkk1p and Mkk2p; MAPKKK is an acronym for mitogen-activated protein (MAP) kinase kinase kinase","termid":"PBO:0084469"}


id: GO:1901480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oleate from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","RHEA:33655","PMID:19493158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transmembrane transporter activity","termid":"GO:0005324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"oleate transmembrane transporter activity","synonyms":[{"name":"oleate transporter activity","type":"related"}],"termid":"GO:1901480"}


id: PBO:0069802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1088, pseudogene","termid":"PBO:0069802"}


id: PBO:0003671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tricarboxylic acid transporter (predicted)","termid":"PBO:0003671"}


id: GO:0016668
data:
  {"annotated_genes":["SJAG_03290","SJAG_05027","SJAG_02016","SJAG_00489","SJAG_04399","SJAG_01162","SJAG_03653","SJAG_01693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91097],"is_not":false,"summary":null,"term":"GO:0016668"},{"annotations":[83466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004148"},{"annotations":[101340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004362"},{"annotations":[102912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047134"},{"annotations":[113657,83807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004783"},{"annotations":[78056,106229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00489":null,"SJAG_01162":null,"SJAG_01693":null,"SJAG_02016":null,"SJAG_03290":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016654","EC:1.8.1.-"],"synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, disulfide as acceptor","type":"exact"},{"name":"oxidoreductase activity, acting on NADH or NADPH, disulphide as acceptor","type":"exact"},{"name":"oxidoreductase activity, acting on a sulfur group of donors, NAD or NADP as acceptor","type":"related"},{"name":"oxidoreductase activity, acting on sulphur group of donors, NAD or NADP as acceptor","type":"exact"}],"termid":"GO:0016668","terms_by_termid":{"GO:0004148":null,"GO:0004362":null,"GO:0004783":null,"GO:0004791":null,"GO:0016668":null,"GO:0047134":null}}


id: PBO:0069844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1130, pseudogene","termid":"PBO:0069844"}


id: PBO:0113284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; mutations in membrane-spanning domains permit cation and histidinol uptake","termid":"PBO:0113284"}


id: PR:O14417
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic spindle assembly checkpoint protein MAD2A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:KER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle assembly checkpoint protein MAD2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.06","secondary_identifiers":["PR:000035572","UniProtKB:O14417"],"synonyms":[{"name":"Spom972h-MAD2L1","type":"exact"}],"termid":"PR:O14417"}


id: PBO:0083942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma glutamylcysteine synthetase; catalyzes the first step in glutathione (GSH) biosynthesis; expression induced by oxidants, cadmium, and mercury; protein abundance increases in response to DNA replication stress","termid":"PBO:0083942"}


id: PR:O74341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit gamma that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03080","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.08c","secondary_identifiers":["UniProtKB:O74341"],"synonyms":[{"name":"CCT-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT3","type":"exact"},{"name":"TCP-1-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74341"}


id: PBO:0065829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6C antisense RNA 1","termid":"PBO:0065829"}


id: GO:2000963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellooligosaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide metabolic process","termid":"GO:2000960"},{"relation_name":"regulates","term_name":"cellooligosaccharide catabolic process","termid":"GO:2000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellooligosaccharide catabolic process","synonyms":[{"name":"regulation of cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000963"}


id: PBO:0039730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C1 pseudogene 1","termid":"PBO:0039730"}


id: PBO:0029007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_splicing_of_long_introns","termid":"PBO:0029007"}


id: PBO:0067737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 36","termid":"PBO:0067737"}


id: PBO:0064148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 1","termid":"PBO:0064148"}


id: GO:0061723
data:
  {"annotated_genes":["SJAG_01561","SJAG_06309","SJAG_04963","SJAG_01783","SJAG_03851","SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86113,93675,94681,96366,104778,105904],"is_not":false,"summary":null,"term":"GO:0061723"}]},"cv_name":"biological_process","definition":"The selective degradation of glycogen by macroautophagy.","definition_xrefs":["PMID:21893048","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen catabolic process","termid":"GO:0005980"},{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_03851":null,"SJAG_04963":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006091","GO:0044248","GO:0006914","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glycophagy","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061723","terms_by_termid":{"GO:0061723":null}}


id: PBO:0013781
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by T. reesei dpm1","termid":"PBO:0013781"}


id: PBO:0040241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 2A","termid":"PBO:0040241"}


id: PBO:0085779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the AP180 family, involved in clathrin cage assembly; binds Pan1p and clathrin; YAP1802 has a paralog, YAP1801, that arose from the whole genome duplication","termid":"PBO:0085779"}


id: PBO:0068258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 5","termid":"PBO:0068258"}


id: PBO:0031253
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_cytokinesis","termid":"PBO:0031253"}


id: FYPO:0005101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and a polyuridylated RNA (poly(U)RNA) is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-RNA interaction","termid":"FYPO:0002134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased poly(U) RNA binding","synonyms":[{"name":"decreased polyU RNA binding","type":"exact"},{"name":"decreased polyuridylated RNA binding","type":"exact"},{"name":"decreased protein-poly(U) RNA interaction","type":"exact"},{"name":"reduced poly(U) RNA binding","type":"exact"}],"termid":"FYPO:0005101"}


id: GO:0106350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 5 isopentenyl diphosphate = 5 diphosphate + all-trans-octaprenyl diphosphate.","definition_xrefs":["PMID:8037730","RHEA:27798","PMID:3519603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"octaprenyl pyrophosphate synthase activity","secondary_identifiers":["EC:2.5.1.90"],"termid":"GO:0106350"}


id: PBO:0006310
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level","termid":"PBO:0006310"}


id: PBO:0047659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 10","termid":"PBO:0047659"}


id: SO:0000324
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide sequence that may be used to identify a larger sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tag","termid":"SO:0000324"}


id: PBO:0055698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLGL scribble cell polarity complex component 1","termid":"PBO:0055698"}


id: PBO:0060111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 12","termid":"PBO:0060111"}


id: PBO:0049069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 85","termid":"PBO:0049069"}


id: FYPO:0007892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone exchange at subtelomeric heterochromatin is increased. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PomBase:vw","PMID:34731638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone turnover","termid":"FYPO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone turnover at subtelomeric heterochromatin","termid":"FYPO:0007892"}


id: PBO:0056147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mab-21 like 2","termid":"PBO:0056147"}


id: GO:0106027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a neuron, e.g. an axon, or a dendrite.","definition_xrefs":["GOC:aruk","PMID:11585923","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection organization","termid":"GO:0106027"}


id: PR:O94490
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C417.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.09c","synonyms":[{"name":"Spom972h-SPCC417.09c","type":"exact"}],"termid":"PR:O94490"}


id: PBO:0060481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 3","termid":"PBO:0060481"}


id: GO:0030275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a LRR domain (leucine rich repeats) of a protein.","definition_xrefs":["GOC:go_curators","Pfam:PF00560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"LRR domain binding","termid":"GO:0030275"}


id: PBO:0048422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger domain containing 2B","termid":"PBO:0048422"}


id: FYPO:0004922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus, has no septum, is elongated, and progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated mononucleate aseptate cell","termid":"FYPO:0000839"},{"relation_name":"is_a","term_name":"inviable mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0005367"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0007701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0000032","FYPO:0000631","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell arrested at G2/M","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic G2/M phase transition arrest","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic G2-phase arrested elongated inviable mononucleate aseptate vegetative cell","type":"related"},{"name":"mitotic cell cycle arrest in G2-phase with elongated inviable mononucleate aseptate cell","type":"related"}],"termid":"FYPO:0004922"}


id: PBO:0064994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 1","termid":"PBO:0064994"}


id: PBO:0066400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 3 alpha","termid":"PBO:0066400"}


id: GO:0042961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + antimonite(in) = ADP + phosphate + antimonite(out).","definition_xrefs":["EC:7.3.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimonite transmembrane transporter activity","termid":"GO:0015104"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled antimonite transmembrane transporter activity","synonyms":[{"name":"ATP-dependent antimonite transporter activity","type":"exact"},{"name":"antimonite-transporting ATPase activity","type":"exact"}],"termid":"GO:0042961"}


id: FYECO:0000359
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which clotrimazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ clotrimazole","termid":"FYECO:0000359"}


id: PBO:0030725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_uracil","termid":"PBO:0030725"}


id: PBO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine deaminase Ccd1 (predicted)","termid":"PBO:0002223"}


id: PBO:0067980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 282","termid":"PBO:0067980"}


id: GO:0034974
data:
  {"annotated_genes":["SJAG_01495","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83964,106431],"is_not":false,"summary":null,"term":"GO:0034974"}]},"cv_name":"cellular_component","definition":"A protein complex involved that contains proteins known in Schizosaccharomyces as Swi5 monomers and Swi2, and is involved in mating type switching.","definition_xrefs":["PMID:14663140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01495":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Swi5-Swi2 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Swi5 complex","type":"broad"}],"termid":"GO:0034974","terms_by_termid":{"GO:0034974":null}}


id: GO:0042656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the phosphorylation and activation of JUN kinase kinase kinases (JNKKKs).","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAP kinase kinase kinase kinase activity","termid":"GO:0008349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0004672","GO:0003824","GO:0140096","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"JUN kinase kinase kinase kinase activity","synonyms":[{"name":"JUNKKKK activity","type":"exact"}],"termid":"GO:0042656"}


id: PBO:0063463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor alpha","termid":"PBO:0063463"}


id: PBO:0002646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg9 (predicted)","termid":"PBO:0002646"}


id: PBO:0062829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncostatin M receptor","termid":"PBO:0062829"}


id: GO:0021834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that guide olfactory bulb interneuron precursors down concentration gradients towards the olfactory bulb.","definition_xrefs":["PMID:12626695","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"embryonic olfactory bulb interneuron precursor migration","termid":"GO:0021831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration","synonyms":[{"name":"negative chemotaxis involved in embryonic olfactory bulb interneuron precursor migration","type":"exact"}],"termid":"GO:0021834"}


id: PBO:0067258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 332, pseudogene","termid":"PBO:0067258"}


id: GO:0003921
data:
  {"annotated_genes":["SJAG_04634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97279],"is_not":false,"summary":null,"term":"GO:0003921"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + XMP + NH4(+) = AMP + diphosphate + GMP + 2H+.","definition_xrefs":["RHEA:18301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"part_of","term_name":"GMP synthase (glutamine-hydrolyzing) activity","termid":"GO:0003922"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"part_of","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"part_of","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"GMP synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GMP-SYN-NH3-RXN"],"termid":"GO:0003921","terms_by_termid":{"GO:0003921":null}}


id: PBO:0054860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2274","termid":"PBO:0054860"}


id: GO:1903302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pyruvate kinase activity.","definition_xrefs":["PMID:15804508","GOC:TermGenie","GO_REF:0000059","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pyruvate kinase activity","synonyms":[{"name":"regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"regulation of phosphoenolpyruvate kinase activity","type":"exact"}],"termid":"GO:1903302"}


id: FYPO:0005436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0000293","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished double-strand break repair","synonyms":[{"name":"abolished double-strand break repair during mitotic cell cycle","type":"related"},{"name":"abolished double-strand break repair during vegetative growth","type":"exact"},{"name":"double-strand break repair abolished","type":"exact"}],"termid":"FYPO:0005436"}


id: GO:0046778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that interferes with the processing of mRNA in the host cell.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by virus of host mRNA processing (obsolete GO:0046778)","synonyms":[{"name":"viral perturbation of host mRNA processing","type":"exact"}],"termid":"GO:0046778"}


id: GO:0072050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the S-shaped body is generated and organized. The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"S-shaped body morphogenesis","termid":"GO:0072050"}


id: PBO:0048260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase 2","termid":"PBO:0048260"}


id: PBO:0018198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone (predicted)","termid":"PBO:0018198"}


id: GO:0047160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-sn-glycerol 3-phosphate + acetyl-CoA = 1-alkyl-2-acetyl-sn-glycerol 3-phosphate + CoA.","definition_xrefs":["RHEA:18557","EC:2.3.1.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"alkylglycerophosphate 2-O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03455","MetaCyc:2.3.1.105-RXN"],"synonyms":[{"name":"acetyl-CoA:1-alkyl-sn-glycero-3-phosphate 2-O-acetyltransferase activity","type":"related"},{"name":"alkyllyso-GP:acetyl-CoA acetyltransferase activity","type":"related"}],"termid":"GO:0047160"}


id: GO:0090262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-excision repair","termid":"GO:2000819"},{"relation_name":"regulates","term_name":"transcription-coupled nucleotide-excision repair","termid":"GO:0006283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription-coupled nucleotide-excision repair","termid":"GO:0090262"}


id: PBO:0087549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauA globular domain of TFIIIC that binds DNA at the BoxA promoter sites of tRNA and similar genes; human homolog is TFIIIC-63","termid":"PBO:0087549"}


id: SO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence [5'-TCG(G/C)(A/T)xxTTxAA], bound by the transcription factor Pho7.","definition_xrefs":["PMID:28811350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho7_binding_site","synonyms":[{"name":"Pho7 binding site","type":"exact"}],"termid":"SO:0002216"}


id: FYPO:0000853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is abnormal. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nucleosome positioning","synonyms":[{"name":"abnormal nucleosome occupancy","type":"related"},{"name":"abnormal nucleosome positioning during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing","type":"exact"}],"termid":"FYPO:0000853"}


