# terms

id: PBO:0028958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_UDP-galactose_transmembrane_transport","termid":"PBO:0028958"}


id: GO:1903885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemokine (C-C motif) ligand 20 production.","definition_xrefs":["PMID:20054338","GO_REF:0000058","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 20 production","termid":"GO:1903884"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-C motif) ligand 20 production","termid":"GO:0036392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine (C-C motif) ligand 20 production","synonyms":[{"name":"down regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"down regulation of CCL-20 production","type":"exact"},{"name":"down regulation of CCL20 production","type":"exact"},{"name":"down regulation of chemokine (C-C motif) ligand 20 production","type":"exact"},{"name":"down-regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"down-regulation of CCL-20 production","type":"exact"},{"name":"down-regulation of CCL20 production","type":"exact"},{"name":"down-regulation of chemokine (C-C motif) ligand 20 production","type":"exact"},{"name":"downregulation of C-C motif chemokine 20 production","type":"exact"},{"name":"downregulation of CCL-20 production","type":"exact"},{"name":"downregulation of CCL20 production","type":"exact"},{"name":"downregulation of chemokine (C-C motif) ligand 20 production","type":"exact"},{"name":"inhibition of C-C motif chemokine 20 production","type":"narrow"},{"name":"inhibition of CCL-20 production","type":"narrow"},{"name":"inhibition of CCL20 production","type":"narrow"},{"name":"inhibition of chemokine (C-C motif) ligand 20 production","type":"narrow"},{"name":"negative regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"negative regulation of CCL-20 production","type":"exact"},{"name":"negative regulation of CCL20 production","type":"exact"}],"termid":"GO:1903885"}


id: PBO:0088897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glycoside hydrolase, family 5","termid":"PBO:0088897"}


id: PBO:0078910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 1-1","termid":"PBO:0078910"}


id: GO:0075133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a calcium or calmodulin-mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host calcium or calmodulin-mediated signal transduction","synonyms":[{"name":"modulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"exact"},{"name":"perturbation of host calcium or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075133"}


id: GO:0005902
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-based cell projection","termid":"GO:0098858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microvillus","secondary_identifiers":["Wikipedia:Microvillus","NIF_Subcellular:sao671419673"],"synonyms":[{"name":"microvilli","type":"related"}],"termid":"GO:0005902"}


id: PR:Q9Y825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcf3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C25H1.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.06","synonyms":[{"name":"Spom972h-pcf3","type":"exact"}],"termid":"PR:Q9Y825"}


id: PBO:0036355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body assembly protein","termid":"PBO:0036355"}


id: SO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base in the start codon is changed, but the start remains.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"initiator_codon_variant","termid":"SO:0001582"},{"relation_name":"is_a","term_name":"synonymous_variant","termid":"SO:0001819"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start_retained_variant","synonyms":[{"name":"snpEff:SYNONYMOUS_START","type":"exact"}],"termid":"SO:0002019"}


id: GO:1905179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle tissue regeneration.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","GO_REF:0000058","PMID:23222520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue regeneration","termid":"GO:1905178"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle tissue regeneration","termid":"GO:0061026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle tissue regeneration","synonyms":[{"name":"down regulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"down-regulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"downregulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"inhibition of cardiac muscle tissue regeneration","type":"narrow"}],"termid":"GO:1905179"}


id: PBO:0043221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Leyden crystal galectin","termid":"PBO:0043221"}


id: PBO:0054261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1646","termid":"PBO:0054261"}


id: GO:0007065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a male.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"male meiosis sister chromatid cohesion","termid":"GO:0007065"}


id: GO:0045204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK export from nucleus (obsolete GO:0045204)","synonyms":[{"name":"MAPK export from cell nucleus","type":"exact"},{"name":"MAPK export out of nucleus","type":"exact"},{"name":"MAPK transport from nucleus to cytoplasm","type":"exact"},{"name":"MAPK-nucleus export","type":"exact"},{"name":"cytoplasmic translocation of MAP kinase","type":"exact"},{"name":"cytoplasmic translocation of mitogen-activated protein kinase","type":"exact"}],"termid":"GO:0045204"}


id: FYPO:0000791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cortical patches is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"},{"relation_name":"is_a","term_name":"abnormal actin cortical patch","termid":"FYPO:0003987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin cortical patch morphology","synonyms":[{"name":"abnormal F-actin patch morphology","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch morphology during vegetative growth","type":"exact"},{"name":"abnormal actin patch morphology","type":"exact"}],"termid":"FYPO:0000791"}


id: PBO:0003279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase (predicted)","termid":"PBO:0003279"}


id: PBO:0077875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase pseudogene 2","termid":"PBO:0077875"}


id: SO:0000740
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a plastid such as a chloroplast.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_sequence","synonyms":[{"name":"plastid sequence","type":"exact"}],"termid":"SO:0000740"}


id: PBO:0029654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock","termid":"PBO:0029654"}


id: PBO:0058159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4453 host gene","termid":"PBO:0058159"}


id: GO:0001506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of neurotransmitters and the storage of the synthesized molecules.","definition_xrefs":["GOC:go_curators","ISBN:0123668387"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter biosynthetic process and storage (obsolete GO:0001506)","synonyms":[{"name":"neurotransmitter anabolism and storage","type":"exact"},{"name":"neurotransmitter biosynthetic process and storage","type":"exact"},{"name":"neurotransmitter formation and storage","type":"exact"},{"name":"neurotransmitter synthesis and storage","type":"exact"}],"termid":"GO:0001506"}


id: PBO:0030511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hesperadin","termid":"PBO:0030511"}


id: MOD:00366
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-sulfo-L-serine.","definition_xrefs":["PubMed:14752058","RESID:AA0361","Unimod:40#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 166.98-167.00 Da","termid":"MOD:00771"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-sulfo-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(sulfooxy)propanoic acid","type":"exact"},{"name":"2-amino-3-hydroxypropanoic acid 3-sulfate","type":"exact"},{"name":"MOD_RES Sulfoserine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"O-sulfo-L-serine","type":"exact"},{"name":"O3-sulfonoserine","type":"exact"},{"name":"O3-sulfoserine","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"serine sulfate ester","type":"exact"}],"termid":"MOD:00366"}


id: SO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation where it decreases transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_repressed","termid":"SO:0000126"},{"relation_name":"is_a","term_name":"autoregulated","termid":"SO:0000471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_autoregulated","synonyms":[{"name":"negatively autoregulated","type":"exact"}],"termid":"SO:0000473"}


id: RO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derives_from","termid":"RO:0001000"}


id: GO:1990760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when a change in the osmolarity occurs in the extracellular space of the cell in which the cation channel resides.","definition_xrefs":["PMID:18279313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osmosensor activity","termid":"GO:0005034"},{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0140299","GO:0022857","GO:0098772","GO:0038023","GO:0005215"],"is_obsolete":false,"name":"osmolarity-sensing monoatomic cation channel activity","synonyms":[{"name":"osmolarity-sensing cation channel activity","type":"broad"}],"termid":"GO:1990760"}


id: PR:O94586
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hnt1 gene.","definition_xrefs":["UniProtKB:O94586","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hit family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.14c","synonyms":[{"name":"Spom972h-hnt1","type":"exact"},{"name":"adenosine 5'-monophosphoramidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94586"}


id: SO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that is modified by editing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_attribute","termid":"SO:0000237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edited","termid":"SO:0000116"}


id: PBO:0088890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine/serine/threonine phosphatase","termid":"PBO:0088890"}


id: PR:Q9P7R6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3B subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20978:SF0","OMA:SCHPO03892","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C211.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.05","secondary_identifiers":["UniProtKB:Q9P7R6"],"synonyms":[{"name":"Spom972h-SF3B5","type":"exact"}],"termid":"PR:Q9P7R6"}


id: PBO:0090802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPA1 sodium ion/proton antiporter","termid":"PBO:0090802"}


id: GO:0034491
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"}]},"cv_name":"biological_process","definition":"The directed movement of neutral amino acids into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"amino acid transmembrane import into vacuole","termid":"GO:0032975"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"neutral amino acid transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034491","terms_by_termid":{"GO:0090516":null}}


id: PR:O60118
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L13, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04037","PANTHER:PTHR11545:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L13-like mitochondrial ribosomal protein Mrpl23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.04","secondary_identifiers":["UniProtKB:O60118"],"synonyms":[{"name":"54S ribosomal protein L23, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"SPBC16G5.04","type":"related"},{"name":"Spom972h-MRPL13","type":"exact"}],"termid":"PR:O60118"}


id: GO:0008298
data:
  {"annotated_genes":["SJAG_03696"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113459],"is_not":false,"summary":null,"term":"GO:0008298"}]},"cv_name":"biological_process","definition":"Any process in which mRNA is transported to, or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"},{"relation_name":"is_a","term_name":"cellular macromolecule localization","termid":"GO:0070727"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"intracellular mRNA localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"intracellular mRNA localisation","type":"exact"},{"name":"intracellular mRNA positioning","type":"narrow"},{"name":"mRNA localization, intracellular","type":"exact"},{"name":"mRNA positioning, intracellular","type":"narrow"}],"termid":"GO:0008298","terms_by_termid":{"GO:0008298":null}}


id: PBO:0086578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant exhibits poor growth at elevated pH and calcium","termid":"PBO:0086578"}


id: GO:1990478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultrasonic stimulus.","definition_xrefs":["PMID:20950932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ultrasound","termid":"GO:1990478"}


id: PBO:0058627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6759","termid":"PBO:0058627"}


id: PBO:0013838
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoPantothenate-Cysteine","termid":"PBO:0013838"}


id: PBO:0091928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalt/nickel-dependent phosphatase Duf89","termid":"PBO:0091928"}


id: GO:0035814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal sodium excretion","termid":"GO:0035813"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}


id: PomGeneEx:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present at levels that vary under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluctuates","termid":"PomGeneEx:0000008"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level fluctuates","synonyms":[{"name":"fluctuating protein level","type":"exact"},{"name":"protein expression fluctuates","type":"exact"}],"termid":"PomGeneEx:0000024"}


id: PBO:0027384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_chromatin_bridge","termid":"PBO:0027384"}


id: PBO:0071146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 10","termid":"PBO:0071146"}


id: PBO:0065401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 4","termid":"PBO:0065401"}


id: PR:000085731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 but not phosphorylated on Ser-10. UniProtKB:P10651, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:19362535","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me(K9),UnPhos(S10)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K9-methylated and unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K9MeUnPhos:1","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"exact"},{"name":"hht3/Me(K9),UnPhos(S10)","type":"exact"}],"termid":"PR:000085731"}


id: FYPO:0000107
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115391,115392,115569,115570],"is_not":false,"summary":null,"term":"FYPO:0000107"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to latrunculin A. Cells stop growing (and may die) at a concentration of latrunculin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to latrunculin A","references_by_uniquename":{"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"synonyms":[{"name":"hypersensitive to latrunculin A","type":"exact"},{"name":"sensitive to LAT-A","type":"exact"},{"name":"sensitive to LatA","type":"exact"},{"name":"sensitive to latrunculin A during mitotic cell cycle","type":"related"},{"name":"sensitive to latrunculin A during vegetative growth","type":"exact"}],"termid":"FYPO:0000107","terms_by_termid":{"FYECO:0000137":null,"FYPO:0000107":null,"FYPO_EXT:0000001":null}}


id: PBO:0030496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_iron-sulfur_cluster_binding","termid":"PBO:0030496"}


id: FYPO:0005367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus, has no septum, and progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000004"],"is_obsolete":false,"name":"inviable mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"inviable mononucleate aseptate cell with mitotic cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell arrested at G2/M","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable mononucleate aseptate vegetative cell with mitotic G2/M phase transition arrest","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic G2-phase arrested inviable mononucleate aseptate vegetative cell","type":"related"},{"name":"mitotic cell cycle arrest in G2-phase with inviable mononucleate aseptate cell","type":"related"}],"termid":"FYPO:0005367"}


id: PBO:0044605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 11","termid":"PBO:0044605"}


id: PBO:0090018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Lea1","termid":"PBO:0090018"}


id: GO:0010464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"}


id: PBO:0047146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 180 member B","termid":"PBO:0047146"}


id: FYPO:0000021
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115467,115493,115461,115456],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03453":null},"genotype_count":4,"genotypes_by_uniquename":{"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"spheroid vegetative cell","references_by_uniquename":{"PMID:29566183":null},"single_locus_annotated_genes":["SJAG_00514","SJAG_01794","SJAG_03453","SJAG_02819"],"single_locus_genotype_uniquenames":["scd1delta","efc25delta","ras1delta","scd2delta"],"synonyms":[{"name":"cell morphology, round vegetative cell","type":"related"},{"name":"cell morphology, rounded vegetative cell","type":"related"},{"name":"rounded vegetative cell","type":"exact"},{"name":"spheroid cell during vegetative growth","type":"exact"},{"name":"spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000021","terms_by_termid":{"FYECO:0000137":null,"FYPO:0002380":null}}


id: CHEBI:16238
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD","termid":"CHEBI:16238"}


id: GO:0035026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features of leading edge cells, cells at the front of a migrating epithelial sheet.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leading edge cell differentiation","termid":"GO:0035026"}


id: PBO:0045088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase pseudogene 1","termid":"PBO:0045088"}


id: GO:0003238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the conus arteriosus over time, from its formation to the mature structure. The conus arteriosus is a valved chamber with thick muscular walls stemming from the ventricle and connecting to the pulmonary trunk.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conus arteriosus development","termid":"GO:0003238"}


id: PBO:0083365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene TRM5/YHR070W","termid":"PBO:0083365"}


id: GO:0008710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + H+ + pimelyl-CoA = 8-amino-7-oxononanoate + CO2 + CoA.","definition_xrefs":["RHEA:20712","EC:2.3.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"8-amino-7-oxononanoate synthase activity","secondary_identifiers":["KEGG_REACTION:R03210","MetaCyc:7KAPSYN-RXN"],"synonyms":[{"name":"6-carboxyhexanoyl-CoA:L-alanine C-carboxyhexanoyltransferase (decarboxylating)","type":"related"},{"name":"7-KAP synthetase activity","type":"related"},{"name":"7-keto-8-amino-pelargonic acid synthetase activity","type":"related"},{"name":"7-keto-8-aminopelargonic acid synthetase activity","type":"related"},{"name":"7-keto-8-aminopelargonic synthetase activity","type":"related"},{"name":"8-amino-7-ketopelargonate synthase activity","type":"related"},{"name":"8-amino-7-oxopelargonate synthase activity","type":"related"},{"name":"AONS activity","type":"related"}],"termid":"GO:0008710"}


id: GO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure found in the nucleolus, which contains nearly completed preribosomal particles destined for the cytoplasm.","definition_xrefs":["PMID:10754561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005730"],"is_obsolete":false,"name":"granular component","secondary_identifiers":["NIF_Subcellular:sao1217793903"],"synonyms":[{"name":"pars granulosa","type":"broad"}],"termid":"GO:0001652"}


id: GO:1903136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cuprous ion, copper(1+).","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:24567322","GO_REF:0000067","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion binding","termid":"GO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0046872","GO:0003674"],"is_obsolete":false,"name":"cuprous ion binding","synonyms":[{"name":"Cu(+) binding","type":"exact"},{"name":"Cu(I) binding","type":"exact"},{"name":"copper(1+) binding","type":"exact"}],"termid":"GO:1903136"}


id: GO:2000782
data:
  {"annotated_genes":["SJAG_04522","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103741,112758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of cell polarity regulating cell shape.","definition_xrefs":["GOC:Mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity","termid":"GO:2000114"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"regulates","term_name":"establishment of cell polarity regulating cell shape","termid":"GO:0071964"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000782","terms_by_termid":{"GO:2000784":null}}


id: PBO:0086873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative sterol transfer protein; one of six StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes; has both GRAM and StART-like (VASt) domains; localizes to membrane contact sites throughout the cell, including nucleus-vacuole junctions and ER-mitochondrial contact sites","termid":"PBO:0086873"}


id: GO:0044064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host respiratory system process (obsolete GO:0044064)","synonyms":[{"name":"regulation by symbiont of host respiratory system process","type":"exact"}],"termid":"GO:0044064"}


id: SOFP:feature_property
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A general purpose relation between a biological feature and some value","definition_xrefs":["so:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_property","termid":"SOFP:feature_property"}


id: PBO:0017418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transformation_of","termid":"PBO:0017418"}


id: PBO:0030037
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss_during_meiotic_cell_cycle","termid":"PBO:0030037"}


id: PBO:0072170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 7","termid":"PBO:0072170"}


id: GO:0010810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:tb","GOC:dph","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-substrate adhesion","termid":"GO:0010810"}


id: GO:0051245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of the cellular defense response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular defense response","termid":"GO:0010185"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"negatively_regulates","term_name":"cellular defense response","termid":"GO:0006968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular defense response","synonyms":[{"name":"down regulation of cellular defense response","type":"exact"},{"name":"down-regulation of cellular defense response","type":"exact"},{"name":"downregulation of cellular defense response","type":"exact"},{"name":"inhibition of cellular defense response","type":"narrow"},{"name":"negative regulation of cellular defence response","type":"exact"}],"termid":"GO:0051245"}


id: PBO:0053137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine decarboxylase 1, pseudogene","termid":"PBO:0053137"}


id: PBO:0067468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 597, pseudogene","termid":"PBO:0067468"}


id: GO:0061819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of small fragments of circular extrachromosomal DNA elements which contain telomeric DNA. It is speculated that telomeric DNA-containing double minutes are formed through a recombination event between the telomere and chromosome-internal TTAGGG-like sequences. Telomeric DNA-containing double minutes appear as two closely positioned dots in metaphase.","definition_xrefs":["PMID:2397458","PMID:14690602","GOC:BHF","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"telomeric DNA-containing double minutes formation","synonyms":[{"name":"TDMs formation","type":"exact"}],"termid":"GO:0061819"}


id: GO:0044781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a bacterial-type flagellum, a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope which functions in cell motility.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacterial-type flagellum organization","termid":"GO:0044781"}


id: GO:0005776
data:
  {"annotated_genes":["SJAG_03100","SJAG_01274","SJAG_04232","SJAG_02699","SJAG_01382","SJAG_02414","SJAG_04655","SJAG_01135","SJAG_06309"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71603,90661,93941,95773,99695,100934,113988],"is_not":false,"summary":null,"term":"GO:0005776"},{"annotations":[86106,109795],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000421"}]},"cv_name":"cellular_component","definition":"A double-membrane-bounded compartment that engulfs endogenous cellular material as well as invading microorganisms to target them to the lytic vacuole/lysosome for degradation as part of macroautophagy.","definition_xrefs":["PMID:11099404","GOC:autophagy","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01135":null,"SJAG_01274":null,"SJAG_01382":null,"SJAG_02414":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_04232":null,"SJAG_04655":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"autophagosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao8663416959"],"synonyms":[{"name":"autophagic vacuole","type":"exact"},{"name":"initial autophagic vacuole","type":"related"}],"termid":"GO:0005776","terms_by_termid":{"GO:0000421":null,"GO:0005776":null}}


id: GO:0004591
data:
  {"annotated_genes":["SJAG_02464"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106265],"is_not":false,"summary":null,"term":"GO:0004591"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + lipoamide + H+ = S-succinyldihydrolipoamide + CO2.","definition_xrefs":["EC:1.2.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","termid":"GO:0016624"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxoglutarate dehydrogenase (succinyl-transferring) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2OXOGLUTDECARB-RXN","RHEA:12188"],"synonyms":[{"name":"2-ketoglutarate dehydrogenase activity","type":"related"},{"name":"2-oxoglutarate dehydrogenase activity","type":"related"},{"name":"2-oxoglutarate: lipoate oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate:dihydrolipoyllysine-residue succinyltransferase-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-succinylating)","type":"related"},{"name":"2-oxoglutarate:lipoamide 2-oxidoreductase (decarboxylating and acceptor-succinylating) activity","type":"related"},{"name":"AKGDH activity","type":"related"},{"name":"OGDC activity","type":"related"},{"name":"alpha-ketoglutarate dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric acid dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric dehydrogenase activity","type":"related"},{"name":"alpha-oxoglutarate dehydrogenase activity","type":"related"},{"name":"ketoglutaric dehydrogenase activity","type":"related"},{"name":"oxoglutarate decarboxylase activity","type":"related"},{"name":"oxoglutarate dehydrogenase (lipoamide) activity","type":"exact"},{"name":"oxoglutarate dehydrogenase activity","type":"related"}],"termid":"GO:0004591","terms_by_termid":{"GO:0004591":null}}


id: SO:1000047
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal inversion that does not include the centromere.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"paracentric","termid":"SO:0001519"},{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paracentric_inversion","synonyms":[{"name":"paracentric inversion","type":"exact"}],"termid":"SO:1000047"}


id: GO:0000732
data:
  {"annotated_genes":["SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96727],"is_not":false,"summary":null,"term":"GO:0000732"},{"annotations":[96729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"The rejection of the broken 3' single-strand DNA molecule that formed heteroduplex DNA with its complement in an intact duplex DNA. The Watson-Crick base pairing in the original duplex is restored. The rejected 3' single-strand DNA molecule reanneals with its original complement to reform two intact duplex molecules.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA strand displacement","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-loop dissociation","type":"related"},{"name":"D-loop processing","type":"related"},{"name":"displacement loop dissociation","type":"related"},{"name":"displacement loop processing","type":"related"},{"name":"strand displacement","type":"exact"}],"termid":"GO:0000732","terms_by_termid":{"GO:0000732":null,"GO:1902346":null}}


id: PBO:0040311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 3","termid":"PBO:0040311"}


id: PBO:0072960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec1 family domain containing 2","termid":"PBO:0072960"}


id: GO:0017095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + heparan sulfate = adenosine 3',5'-bisphosphate + heparan sulfate 6-O-sulfate; results in 6-O-sulfation of glucosamine residues in heparan sulfate.","definition_xrefs":["PMID:8631808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"heparan sulfate 6-O-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2076419"],"synonyms":[{"name":"heparan sulphate 6-O-sulphotransferase activity","type":"exact"},{"name":"heparin 6-O-sulfotransferase activity","type":"related"}],"termid":"GO:0017095"}


id: PBO:0066434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated endocrine specific protein 18","termid":"PBO:0066434"}


id: PATO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer that has mass near a gravitational body.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Weight"],"direct_ancestors":[{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"weight","termid":"PATO:0000128"}


id: GO:1905760
data:
  {"annotated_genes":["SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87406],"is_not":false,"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"Any microtubule end that is part of a post-anaphase array microtubule.","definition_xrefs":["PMID:11007487","GO_REF:0000064","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"},{"relation_name":"part_of","term_name":"post-anaphase array microtubule","termid":"GO:1905759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02045":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"post-anaphase array microtubule end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule end of microtubule of PAA","type":"exact"},{"name":"microtubule end of microtubule of post-anaphase array","type":"exact"},{"name":"microtubule end of microtubule of post-anaphase microtubule array","type":"exact"},{"name":"microtubule end of microtubuli of PAA","type":"exact"},{"name":"microtubule end of microtubuli of post-anaphase array","type":"exact"},{"name":"microtubule end of microtubuli of post-anaphase microtubule array","type":"exact"},{"name":"microtubule end of microtubulus of PAA","type":"exact"},{"name":"microtubule end of microtubulus of post-anaphase array","type":"exact"},{"name":"microtubule end of microtubulus of post-anaphase microtubule array","type":"exact"},{"name":"microtubule end of neurotubule of PAA","type":"narrow"},{"name":"microtubule end of neurotubule of post-anaphase array","type":"narrow"},{"name":"microtubule end of neurotubule of post-anaphase microtubule array","type":"narrow"},{"name":"microtubule end of post-anaphase array microtubule","type":"exact"}],"termid":"GO:1905760","terms_by_termid":{"GO:1905760":null}}


id: PBO:0005030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mde7","termid":"PBO:0005030"}


id: PR:P04913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- htb1 gene.","definition_xrefs":["UniProtKB:P04913","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.09","synonyms":[{"name":"H2B.1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-htb1","type":"exact"}],"termid":"PR:P04913"}


id: GO:0051637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a Gram-positive bacterium.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete Gram-positive bacterial cell surface binding (obsolete GO:0051637)","synonyms":[{"name":"Gram-positive bacterial binding","type":"exact"},{"name":"Gram-positive bacterial cell surface binding","type":"exact"},{"name":"Gram-positive bacterium binding","type":"exact"},{"name":"Gram-positive bacterium cell surface binding","type":"exact"},{"name":"binding to Gram-positive bacterium","type":"exact"}],"termid":"GO:0051637"}


id: PBO:0034170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_transport_across","termid":"PBO:0034170"}


id: PBO:0087491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex; involved in both chromosomal DNA replication and inheritance of telomeric silencing; stabilizes the interaction of Pol epsilon with primer-template DNA, positively affecting the processivity of the polymerase and exonuclease activities of Pol epsilon; interacts with extranucleosomal DNA and acts as anchor point for ISW2 complex that retains its position on DNA during nucleosome mobilization","termid":"PBO:0087491"}


id: PBO:0063918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta pseudogene 1","termid":"PBO:0063918"}


id: GO:0071489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to red or far red light","termid":"GO:0071489"}


id: PBO:0035812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_tRNA_genes_during_vegetative_growth","termid":"PBO:0035812"}


id: PBO:0030086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_glutathione","termid":"PBO:0030086"}


id: PR:P35551
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA 2'-O-methyltransferase fibrillarin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03507","PRO:DNx","PANTHER:PTHR10335:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA 2'-O-methyltransferase fibrillarin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.10c","secondary_identifiers":["UniProtKB:P35551"],"synonyms":[{"name":"Spom972h-FBL","type":"exact"},{"name":"histone-glutamine methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P35551"}


id: GO:0046542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of alpha-factor, one of the two yeast mating factors, out of a cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-factor export (obsolete GO:0046542)","synonyms":[{"name":"alpha-factor export","type":"exact"}],"termid":"GO:0046542"}


id: PBO:0057120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 204","termid":"PBO:0057120"}


id: GO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome.","definition_xrefs":["ISBN:0198506732","ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"acrosomal vesicle","secondary_identifiers":["Wikipedia:Acrosome"],"synonyms":[{"name":"acrosomal granule","type":"exact"},{"name":"acrosome","type":"exact"}],"termid":"GO:0001669"}


id: PBO:0040364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 1","termid":"PBO:0040364"}


id: GO:1901778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentalenolactone.","definition_xrefs":["GOC:yaf","PMID:17178094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"pentalenolactone metabolic process","synonyms":[{"name":"pentalenolactone metabolism","type":"exact"}],"termid":"GO:1901778"}


id: PBO:0083405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YHR032C-A","termid":"PBO:0083405"}


id: PBO:0060010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 30","termid":"PBO:0060010"}


id: PBO:0045833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 23","termid":"PBO:0045833"}


id: GO:0018704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-chloro-2-hydroxymuconic semialdehyde + H+ + 2 e- = Cl- + 2-hydroxymuconic semialdehyde.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-chloro-2-hydroxymuconic semialdehyde dehalogenase activity (obsolete GO:0018704)","synonyms":[{"name":"5-chloro-2-hydroxymuconic semialdehyde dehalogenase activity","type":"exact"}],"termid":"GO:0018704"}


id: PBO:0038991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate lyase","termid":"PBO:0038991"}


id: PR:O42887
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8E4.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.03","synonyms":[{"name":"AUH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC8E4.03","type":"exact"},{"name":"agmatine ureohydrolase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42887"}


id: PBO:0070595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 62","termid":"PBO:0070595"}


id: PBO:0016518
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mkh1-Pek1-Pmk1 MAP kinase","termid":"PBO:0016518"}


id: PBO:0059270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L34","termid":"PBO:0059270"}


id: GO:0036176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a neutral pH (pH close to 7) stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["Wikipedia:PH","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to neutral pH","termid":"GO:0036176"}


id: PBO:0070139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 53 pseudogene","termid":"PBO:0070139"}


id: PBO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family","termid":"PBO:0000619"}


id: PBO:0046438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPM2A divergent transcript","termid":"PBO:0046438"}


id: PBO:0044614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 16","termid":"PBO:0044614"}


id: PBO:0002579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn10","termid":"PBO:0002579"}


id: GO:1905781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine exposure on apoptotic cell surface.","definition_xrefs":["GOC:kmv","GO_REF:0000058","PMID:17401362","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipid translocation","termid":"GO:0061093"},{"relation_name":"is_a","term_name":"negative regulation of execution phase of apoptosis","termid":"GO:1900118"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine exposure on apoptotic cell surface","termid":"GO:1905780"},{"relation_name":"negatively_regulates","term_name":"phosphatidylserine exposure on apoptotic cell surface","termid":"GO:0070782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"down regulation of externalization of phosphatidylserine","type":"exact"},{"name":"down regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"down-regulation of externalization of phosphatidylserine","type":"exact"},{"name":"down-regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"downregulation of externalization of phosphatidylserine","type":"exact"},{"name":"downregulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"inhibition of externalization of phosphatidylserine","type":"narrow"},{"name":"inhibition of phosphatidylserine exposure on apoptotic cell surface","type":"narrow"},{"name":"negative regulation of externalization of phosphatidylserine","type":"exact"}],"termid":"GO:1905781"}


id: FYPO:0000750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to silver ions. Cells stop growing (and may die) at a concentration of silver ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to silver ions","synonyms":[{"name":"hypersensitive to silver ions","type":"exact"},{"name":"sensitive to silver","type":"related"},{"name":"sensitive to silver ions during mitotic cell cycle","type":"related"},{"name":"sensitive to silver ions during vegetative growth","type":"exact"}],"termid":"FYPO:0000750"}


id: PBO:0080873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YME1L1 pseudogene 1","termid":"PBO:0080873"}


id: GO:0047170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate + sinapoyl-CoA = 2-O-sinapoyl-D-glucarate + CoA.","definition_xrefs":["EC:2.3.1.131","RHEA:23308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"glucarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02899","MetaCyc:2.3.1.131-RXN"],"synonyms":[{"name":"sinapoyl-CoA:glucarate O-(hydroxycinnamoyl)transferase activity","type":"related"}],"termid":"GO:0047170"}


id: GO:0050815
data:
  {"annotated_genes":["SJAG_03118","SJAG_04933"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71415,76870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated serine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphoserine residue binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoserine binding","type":"related"}],"termid":"GO:0050815","terms_by_termid":{"GO:1990269":null}}


id: GO:0070448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + laricitrin = S-adenosyl-L-homocysteine + syringetin.","definition_xrefs":["RHEA:25633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"laricitrin 5'-O-methyltransferase activity","secondary_identifiers":["EC:2.1.1.267","MetaCyc:RXN-8452","KEGG_REACTION:R06816"],"synonyms":[{"name":"CrCOMT2","type":"related"},{"name":"S-adenosyl-L-methionine:myricetin O-methyltransferase activity","type":"related"},{"name":"flavonoid 3',5'-O-dimethyltransferase activity","type":"related"}],"termid":"GO:0070448"}


id: PBO:0089673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multispanning 7TM plasma membrane rhodopsin family protein, implicated in signalling","termid":"PBO:0089673"}


id: PBO:0066057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor 2","termid":"PBO:0066057"}


id: PBO:0004076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga5","termid":"PBO:0004076"}


id: PBO:0058242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4529","termid":"PBO:0058242"}


id: PR:Q9HDX9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00773","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.11c","secondary_identifiers":["UniProtKB:Q9HDX9"],"synonyms":[{"name":"GluRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EARS2","type":"exact"},{"name":"glutamyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDX9"}


id: PBO:0056926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol oxygenase pseudogene 1","termid":"PBO:0056926"}


id: PBO:0040526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azurocidin 1","termid":"PBO:0040526"}


id: PBO:0060639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 2","termid":"PBO:0060639"}


id: PBO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family (predicted)","termid":"PBO:0000850"}


id: PBO:0079733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 10 (pseudogene)","termid":"PBO:0079733"}


id: GO:0034776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histamine stimulus. Histamine, the biogenic amine 2-(1H-imidazol-4-yl)ethanamine, is involved in local immune responses as well as regulating physiological function in the gut and acting as a neurotransmitter.","definition_xrefs":["GOC:vk","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to histamine","synonyms":[{"name":"response to histamine stimulus","type":"exact"}],"termid":"GO:0034776"}


id: GO:0000152
data:
  {"annotated_genes":["SJAG_04180","SJAG_02119","SJAG_00756","SJAG_00341","SJAG_03680","SJAG_02651","SJAG_01572","SJAG_03858","SJAG_02162","SJAG_03809","SJAG_03351","SJAG_01801","SJAG_05012","SJAG_03037","SJAG_01540","SJAG_04661","SJAG_03350","SJAG_05329","SJAG_02591","SJAG_02299","SJAG_00071","SJAG_04853","SJAG_00666","SJAG_03575","SJAG_00146","SJAG_02186","SJAG_05236","SJAG_04520","SJAG_02822","SJAG_03219","SJAG_01956","SJAG_03561","SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102292,95680,96210,92662,78916,63053,109279,108363,95685,89787,96877,91210,98381,87769,86369,77881,103724,97917,78717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005680"},{"annotations":[90386,113869,106616,114981,92787,110140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[90389,105210,93838,106454,86630,100976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"},{"annotations":[106096,87557,92750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033768"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex found in the nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00146":null,"SJAG_00341":null,"SJAG_00666":null,"SJAG_00756":null,"SJAG_01540":null,"SJAG_01572":null,"SJAG_01801":null,"SJAG_01956":null,"SJAG_02119":null,"SJAG_02162":null,"SJAG_02186":null,"SJAG_02299":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03037":null,"SJAG_03219":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03561":null,"SJAG_03575":null,"SJAG_03680":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04180":null,"SJAG_04520":null,"SJAG_04574":null,"SJAG_04661":null,"SJAG_04853":null,"SJAG_05012":null,"SJAG_05236":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000152","terms_by_termid":{"GO:0005680":null,"GO:0033768":null,"GO:0043224":null,"GO:0043494":null}}


id: PBO:0043396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X9-C motif containing 4","termid":"PBO:0043396"}


id: GO:0021964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the red nucleus of the midbrain towards target cells in the spinal cord.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rubrospinal tract morphogenesis","termid":"GO:0021964"}


id: PBO:0083065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrosphingosine 1-phosphate phosphatase; membrane protein involved in sphingolipid metabolism; YSR3 has a paralog, LCB3, that arose from the whole genome duplication","termid":"PBO:0083065"}


id: PBO:0027664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_heterochromatin_organization_during_vegetative_growth","termid":"PBO:0027664"}


id: PBO:0042815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide synthase 4","termid":"PBO:0042815"}


id: PBO:0084006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycine-tRNA synthetase, not expressed under normal growth conditions; expression is induced under heat, oxidative, pH, or ethanol stress conditions; more stable than the major glycine-tRNA synthetase Grs1p at 37 deg C; GRS2 has a paralog, GRS1, that arose from the whole genome duplication","termid":"PBO:0084006"}


id: PBO:0068480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 61, pseudogene","termid":"PBO:0068480"}


id: GO:0007615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The memory process that results in the formation of consolidated memory resistant to disruption of the patterned activity of the brain, without requiring protein synthesis.","definition_xrefs":["PMID:15143285","PMID:17088531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"memory","termid":"GO:0007613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anesthesia-resistant memory","termid":"GO:0007615"}


id: PBO:0076542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription activation suppressor family member 2","termid":"PBO:0076542"}


id: FYPO:0002362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3 acetylation occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone acetylation during vegetative growth","termid":"FYPO:0000331"},{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3 acetylation during mitotic cell cycle","type":"related"},{"name":"reduced histone H3 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002362"}


id: PBO:0045098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DM1 locus antisense RNA","termid":"PBO:0045098"}


id: GO:0072503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent cations at the level of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular divalent inorganic cation homeostasis (obsolete GO:0072503)","termid":"GO:0072503"}


id: PBO:0062036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 5","termid":"PBO:0062036"}


id: PBO:0087098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal lysine methyltransferase; specific for monomethylation of Rpl42ap and Rpl42bp (lysine 40); nuclear SET domain containing protein; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087098"}


id: PBO:0068414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanylyltransferase and 5'-phosphatase","termid":"PBO:0068414"}


id: PBO:0065437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 10","termid":"PBO:0065437"}


id: PBO:0085002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of actin nucleation-promoting factor activity; interacts with Las17p, a homolog of human Wiskott-Aldrich Syndrome protein (WASP), via an N-terminal SH3 domain, and along with PIN3 cooperatively inhibits the nucleation of actin filaments; overexpression blocks receptor-mediated endocytosis; protein increases in abundance and forms nuclear foci in response to DNA replication stress; LSB1 has a paralog, PIN3, that arose from the whole genome duplication","termid":"PBO:0085002"}


id: PBO:0071847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 42","termid":"PBO:0071847"}


id: PBO:0086569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YOR376W is not an essential gene","termid":"PBO:0086569"}


id: SO:0100013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Hydrophobic regions are regions with a low affinity for water.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"hydrophobic_region_of_peptide","synonyms":[{"name":"hydropathic","type":"related"},{"name":"hydrophobic region of peptide","type":"related"},{"name":"hydrophobic_region","type":"exact"},{"name":"hydrophobicity","type":"related"}],"termid":"SO:0100013"}


id: PBO:0064213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase B domain containing 2","termid":"PBO:0064213"}


id: GO:0000444
data:
  {"annotated_genes":["SJAG_01228","SJAG_00418","SJAG_03220","SJAG_02346"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91610,95344,106446,106490],"is_not":false,"summary":null,"term":"GO:0000444"}]},"cv_name":"cellular_component","definition":"A multiprotein kinetochore subcomplex that binds to centromeric chromatin and forms part of the outer kinetochore. It helps to recruit outer kinetochore subunits that will bind to microtubules. In humans, it consists of MIS12, DSN1, NSL1 and PMF1.","definition_xrefs":["GOC:krc","PMID:16585270","PMID:14633972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_01228":null,"SJAG_02346":null,"SJAG_03220":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0000776","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"MIS12/MIND type complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000818"],"synonyms":[{"name":"MIND complex","type":"exact"},{"name":"Mis12 complex","type":"narrow"},{"name":"Mtw1p Including Nnf1p-Nsl1p-Dsn1p complex","type":"related"},{"name":"nuclear MIS12/MIND complex","type":"related"}],"termid":"GO:0000444","terms_by_termid":{"GO:0000444":null}}


id: FYPO:0007210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total volume of all mitochondria in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrial morphology","termid":"FYPO:0003896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitochondrial volume","synonyms":[{"name":"normal mitochondrial volume during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial volume during vegetative growth","type":"exact"},{"name":"normal total mitochondrial volume","type":"exact"}],"termid":"FYPO:0007210"}


id: PBO:0053714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 923","termid":"PBO:0053714"}


id: PBO:0091097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF ATP-dependent chromatin remodeler Snf22","termid":"PBO:0091097"}


id: PBO:0091441
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not appear to be the ortholog of S. cerevisiae CYB2, missing the N-term cytochrome B2 domain","termid":"PBO:0091441"}


id: GO:0140648
data:
  {"annotated_genes":["SJAG_03486","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112658,114403],"is_not":false,"summary":null,"term":"GO:0140648"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["PMID:22375066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0110044"},{"relation_name":"positively_regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03486":null,"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140648","terms_by_termid":{"GO:0140648":null}}


id: GO:0021985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the neurohypophysis over time from its initial formation until its mature state. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"pituitary gland development","termid":"GO:0021983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurohypophysis development","synonyms":[{"name":"neurophysis development","type":"exact"},{"name":"posterior pituitary development","type":"exact"},{"name":"posterior pituitary gland development","type":"exact"}],"termid":"GO:0021985"}


id: GO:0031634
data:
  {"annotated_genes":["SJAG_00073","SJAG_04855","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990943"},{"annotations":[111185,98376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043110"},{"annotations":[98377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"}]},"cv_name":"molecular_function","definition":"Binding to replication fork barriers, sites that inhibit the progress of replication forks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"replication fork barrier binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031634","terms_by_termid":{"GO:0043110":null,"GO:0110035":null,"GO:1990943":null}}


id: PBO:0072566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRBP1 pseudogene 1","termid":"PBO:0072566"}


id: PR:Q9P7Q0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDT1-like protein C186.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.05c","synonyms":[{"name":"Spom972h-SPAC186.05c","type":"exact"}],"termid":"PR:Q9P7Q0"}


id: PBO:0071113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 115","termid":"PBO:0071113"}


id: GO:0030048
data:
  {"annotated_genes":["SJAG_00750","SJAG_03011","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033275"},{"annotations":[104269,112354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based process","termid":"GO:0030029"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00750":null,"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin filament-based movement","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030048","terms_by_termid":{"GO:0030050":null,"GO:0033275":null}}


id: PBO:0091666
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long non-coding RNAs (mlonRNA) initiated from sites upstream of fbp1 are transcribed prior to full transcriptional activation of fbp1 during glucose starvation","termid":"PBO:0091666"}


id: PBO:0036293
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective in Mitotic Arrest","termid":"PBO:0036293"}


id: GO:0042657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the lateral surface of major histocompatibility complex class II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class II protein binding","termid":"GO:0042289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"MHC class II protein binding, via lateral surface","synonyms":[{"name":"major histocompatibility complex class II protein binding, via lateral surface","type":"exact"}],"termid":"GO:0042657"}


id: PBO:0090239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glucose/fructose:proton symporter Ght6","termid":"PBO:0090239"}


id: PBO:0065324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 47, pseudogene","termid":"PBO:0065324"}


id: GO:1903850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cristae formation.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:pad","GOC:TermGenie","PMID:19279012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"regulates","term_name":"cristae formation","termid":"GO:0042407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"regulation of cristae formation","termid":"GO:1903850"}


id: GO:0102456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-sinapoyl-beta-D-glucose = cyanin betaine + trans-sinapate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 5-O-glucosyltransferase (sinapoyl-glucose dependent) activity (obsolete GO:0102456)","termid":"GO:0102456"}


id: GO:0021850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of glioblasts in the subpallium. These cells will give rise to oligodendrocytes.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblast division","termid":"GO:0048860"},{"relation_name":"part_of","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium glioblast cell division","synonyms":[{"name":"glioblast cell division in subpallium","type":"exact"},{"name":"glioblast division in ventral telencephalon","type":"exact"}],"termid":"GO:0021850"}


id: PBO:0035899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_secretion_during_vegetative_growth","termid":"PBO:0035899"}


id: GO:0033234
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57435],"is_not":false,"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of SUMO groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein sumoylation","termid":"GO:0033233"},{"relation_name":"is_a","term_name":"negative regulation of protein modification by small protein conjugation or removal","termid":"GO:1903321"},{"relation_name":"negatively_regulates","term_name":"protein sumoylation","termid":"GO:0016925"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein sumoylation","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"negative regulation of sumoylation","type":"exact"}],"termid":"GO:0033234","terms_by_termid":{"GO:0033234":null}}


id: GO:0002726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"is_a","term_name":"positive regulation of cytokine production involved in immune response","termid":"GO:0002720"},{"relation_name":"is_a","term_name":"regulation of T cell cytokine production","termid":"GO:0002724"},{"relation_name":"positively_regulates","term_name":"T cell cytokine production","termid":"GO:0002369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell cytokine production","synonyms":[{"name":"activation of T cell cytokine production","type":"narrow"},{"name":"positive regulation of T lymphocyte cytokine production","type":"exact"},{"name":"positive regulation of T-cell cytokine production","type":"exact"},{"name":"positive regulation of T-lymphocyte cytokine production","type":"exact"},{"name":"stimulation of T cell cytokine production","type":"narrow"},{"name":"up regulation of T cell cytokine production","type":"exact"},{"name":"up-regulation of T cell cytokine production","type":"exact"},{"name":"upregulation of T cell cytokine production","type":"exact"}],"termid":"GO:0002726"}


id: PBO:0027250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_dimethyl_sulfoxide","termid":"PBO:0027250"}


id: GO:0009025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tagatose 1,6-diphosphate = D-glyceraldehyde 3-phosphate + glycerone phosphate.","definition_xrefs":["EC:4.1.2.40","RHEA:22948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"tagatose-bisphosphate aldolase activity","secondary_identifiers":["MetaCyc:TAGAALDOL-RXN","KEGG_REACTION:R01069"],"synonyms":[{"name":"AgaY","type":"related"},{"name":"AgaZ","type":"related"},{"name":"D-tagatose-1,6-bisphosphate D-glyceraldehyde 3-phosphate-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"D-tagatose-1,6-bisphosphate aldolase activity","type":"related"},{"name":"D-tagatose-1,6-bisphosphate triosephosphate lyase activity","type":"exact"},{"name":"KbaY","type":"related"},{"name":"tagatose 1,6-diphosphate aldolase activity","type":"related"},{"name":"tagatose-1,6-bisphosphate aldolase 1","type":"exact"}],"termid":"GO:0009025"}


id: PR:Q9P6I4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1198.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6I4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase C1198.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.06c","synonyms":[{"name":"Spom972h-SPBC1198.06c","type":"exact"},{"name":"endo-alpha-1->6-D-mannanase C1198.06c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I4"}


id: PBO:0058419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4788","termid":"PBO:0058419"}


id: GO:2000299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Rho-dependent protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"},{"relation_name":"is_a","term_name":"regulation of Rho-dependent protein serine/threonine kinase activity","termid":"GO:2000298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Rho-dependent protein serine/threonine kinase activity","synonyms":[{"name":"negative regulation of ROCK kinase activity","type":"exact"},{"name":"negative regulation of Rho-associated protein kinase activity","type":"exact"}],"termid":"GO:2000299"}


id: PBO:0073770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 3","termid":"PBO:0073770"}


id: GO:0004105
data:
  {"annotated_genes":["SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111921],"is_not":false,"summary":null,"term":"GO:0004105"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + choline phosphate = diphosphate + CDP-choline.","definition_xrefs":["EC:2.7.7.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.7.7.15-RXN","Reactome:R-HSA-1483081","RHEA:18997"],"synonyms":[{"name":"CDP-choline pyrophosphorylase activity","type":"related"},{"name":"CDP-choline synthetase activity","type":"related"},{"name":"CTP-phosphocholine cytidylyltransferase activity","type":"related"},{"name":"CTP:choline-phosphate cytidylyltransferase activity","type":"exact"},{"name":"CTP:phosphocholine cytidylyltransferase activity","type":"related"},{"name":"CTP:phosphorylcholine cytidylyltransferase activity","type":"related"},{"name":"choline phosphate cytidylyltransferase activity","type":"related"},{"name":"cytidine diphosphocholine pyrophosphorylase activity","type":"related"},{"name":"phosphocholine cytidylyltransferase activity","type":"related"},{"name":"phosphorylcholine cytidylyltransferase activity","type":"related"},{"name":"phosphorylcholine transferase activity","type":"related"},{"name":"phosphorylcholine:CTP cytidylyltransferase activity","type":"related"}],"termid":"GO:0004105","terms_by_termid":{"GO:0004105":null}}


id: GO:1902194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["PMID:15574432","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"2-methylbut-2-enoyl-CoA(4-) metabolic process","termid":"GO:1902192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006790","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"2-methylbut-2-enoyl-CoA(4-) biosynthetic process","synonyms":[{"name":"2-methylbut-2-enoyl-CoA(4-) anabolism","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) biosynthesis","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) formation","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) synthesis","type":"exact"}],"termid":"GO:1902194"}


id: GO:0080069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-methylthioheptyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 7-methylthioheptyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desulfoglucosinolate sulfotransferase activity","termid":"GO:0047364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4332"],"termid":"GO:0080069"}


id: PBO:0111778
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYRK subfamily","termid":"PBO:0111778"}


id: GO:0099510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed change of cytosolic calcium ion concentration in the cytosol via the reversible binding of calcium ions to calcium-binding proteins in the cytosol thereby modulating the spatial and temporal dynamics of changes in cytosolic calcium concentrations.","definition_xrefs":["PMID:26190970","PMID:24442513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion binding","termid":"GO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcium ion binding involved in regulation of cytosolic calcium ion concentration","synonyms":[{"name":"regulation of cytosolic calcium ion concentration by calcium ion buffering","type":"exact"}],"termid":"GO:0099510"}


id: PBO:0054321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1713","termid":"PBO:0054321"}


id: PBO:0067972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 274","termid":"PBO:0067972"}


id: GO:0090230
data:
  {"annotated_genes":["SJAG_04638","SJAG_01837","SJAG_03048","SJAG_00718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[98471,112852,85682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of centromere complex assembly, the aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"centromere complex assembly","termid":"GO:0034508"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of centromere complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere licensing","type":"related"}],"termid":"GO:0090230","terms_by_termid":{"GO:1905560":null,"GO:1905561":null}}


id: PBO:0031885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome methytransferase involved in ribosome assembly Hpm1 (predicted)","termid":"PBO:0031885"}


id: GO:0007321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physical displacement of sperm stored from previous mating encounters.","definition_xrefs":["PMID:10440373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm competition","termid":"GO:0046692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm displacement","termid":"GO:0007321"}


id: PBO:0076987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 5","termid":"PBO:0076987"}


id: PBO:0040846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 1","termid":"PBO:0040846"}


id: GO:0045991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one carbon source leads to an increase in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["GOC:mah","PMID:10559153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription","termid":"GO:0045990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"carbon catabolite activation of transcription","synonyms":[{"name":"positive regulation of transcription by carbon catabolites","type":"exact"}],"termid":"GO:0045991"}


id: GO:0001155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RNA polymerase III transcription factor of the TFIIIA class, one of the factors involved in formation of the preinitiation complex (PIC) at RNA polymerase III promoters.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III general transcription initiation factor binding","termid":"GO:0001025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TFIIIA-class transcription factor binding","termid":"GO:0001155"}


id: GO:0018653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-methyl-2-oxo-1,2-dihydroquinoline + O2 + 2 H+ + 2 e- = H2O + 6-hydroxy-3-methyl-2-oxo-1,2-dihydroquinoline.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-methyl-2-oxo-1,2-dihydroquinoline 6-monooxygenase activity (obsolete GO:0018653)","secondary_identifiers":["UM-BBD_reactionID:r0046"],"termid":"GO:0018653"}


id: PBO:0071044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 46","termid":"PBO:0071044"}


id: PBO:0069806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1092, pseudogene","termid":"PBO:0069806"}


id: PBO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Sck1","termid":"PBO:0001534"}


id: GO:0046188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methane metabolic process","termid":"GO:0015947"},{"relation_name":"is_a","term_name":"alkane catabolic process","termid":"GO:0043448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"methane catabolic process","synonyms":[{"name":"methane breakdown","type":"exact"},{"name":"methane catabolism","type":"exact"},{"name":"methane degradation","type":"exact"}],"termid":"GO:0046188"}


id: GO:0098646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of collagen triple helices associated to form a sheet-like network.","definition_xrefs":["GOC:dos","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen network","termid":"GO:0098645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen sheet","synonyms":[{"name":"collagen hexagonal network","type":"exact"}],"termid":"GO:0098646"}


id: PBO:0017598
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mei2 Interacting Protein","termid":"PBO:0017598"}


id: PBO:0047060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A2, pseudogene","termid":"PBO:0047060"}


id: PBO:0088096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Unique component of the U4/U6.U5 tri-snRNP particle; tri-snRNP is required for conformational changes which result in the catalytic activation of the spliceosome; dispensable for spliceosome assembly","termid":"PBO:0088096"}


id: GO:0039010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the pronephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of pronephric tubule identity","termid":"GO:0039005"},{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in pronephric nephron development","termid":"GO:0072196"},{"relation_name":"part_of","term_name":"pronephric distal tubule morphogenesis","termid":"GO:0039013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric distal tubule identity","termid":"GO:0039010"}


id: GO:0016410
data:
  {"annotated_genes":["SJAG_00102","SJAG_03162","SJAG_03288","SJAG_01899","SJAG_00469","SJAG_02726","SJAG_01619","SJAG_04791","SJAG_01638","SJAG_00246","SJAG_02773","SJAG_03961","SJAG_02990","SJAG_02085","SJAG_00676","SJAG_02842","SJAG_04131","SJAG_01826","SJAG_04631","SJAG_00695","SJAG_03112","SJAG_02165","SJAG_01877","SJAG_03537","SJAG_01204","SJAG_02296","SJAG_00519","SJAG_01592","SJAG_04535","SJAG_00097","SJAG_02309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101513],"is_not":false,"summary":null,"term":"GO:0016410"},{"annotations":[77280,91831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003870"},{"annotations":[96708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004059"},{"annotations":[88788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046941"},{"annotations":[84269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047198"},{"annotations":[96709,83447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004145"},{"annotations":[69696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004343"},{"annotations":[98722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004358"},{"annotations":[104495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004379"},{"annotations":[114718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[87436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010484"},{"annotations":[87437,86790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[87438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[95044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[105457,105458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[87439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[114719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[84465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[95045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046972"},{"annotations":[84466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[84467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"},{"annotations":[108059,98723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004042"},{"annotations":[98685,107257,99132,113429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008080"},{"annotations":[95046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106226"},{"annotations":[114166,111510,99693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004596"},{"annotations":[95047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140065"},{"annotations":[87440,95048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140064"},{"annotations":[95049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034212"},{"annotations":[85429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990190"},{"annotations":[100108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061733"},{"annotations":[99694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120518"},{"annotations":[85430,114720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990189"},{"annotations":[108214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046027"},{"annotations":[88639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990883"},{"annotations":[87927,106211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050291"},{"annotations":[103449,88641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051392"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl 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id: PBO:0045811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 1","termid":"PBO:0045811"}


id: GO:0006777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.","definition_xrefs":["PMID:22370186","ISSN:09498257","PMID:23201473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"},{"relation_name":"is_a","term_name":"molybdopterin cofactor biosynthetic process","termid":"GO:0032324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Mo-molybdopterin cofactor biosynthetic process","secondary_identifiers":["MetaCyc:PWY-6823"],"synonyms":[{"name":"Mo-molybdopterin cofactor anabolism","type":"exact"},{"name":"Mo-molybdopterin cofactor biosynthesis","type":"exact"},{"name":"Mo-molybdopterin cofactor formation","type":"exact"},{"name":"Mo-molybdopterin cofactor synthesis","type":"exact"},{"name":"Moco biosynthesis","type":"exact"},{"name":"Moco biosynthetic process","type":"exact"},{"name":"molybdenum cofactor biosynthetic process","type":"related"}],"termid":"GO:0006777"}


id: GO:0015885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of 5-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate, into, out of, within, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"5-formyltetrahydrofolate transport","termid":"GO:0015885"}


id: GO:0060045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation.","definition_xrefs":["GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle tissue growth","termid":"GO:0055023"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell proliferation","termid":"GO:0060043"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell proliferation","termid":"GO:0060038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell proliferation","synonyms":[{"name":"positive regulation of heart muscle cell proliferation","type":"related"}],"termid":"GO:0060045"}


id: PBO:0066561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh associated glycoprotein","termid":"PBO:0066561"}


id: GO:0000045
data:
  {"annotated_genes":["SJAG_05017","SJAG_01876","SJAG_02699","SJAG_04502","SJAG_04655","SJAG_02640","SJAG_02441","SJAG_04232","SJAG_03100","SJAG_03851","SJAG_01467","SJAG_06309","SJAG_05289","SJAG_01561","SJAG_00029","SJAG_01274","SJAG_02414","SJAG_01251","SJAG_00114","SJAG_00645","SJAG_04294","SJAG_01283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71606,83866,86110,87640,88648,88938,90669,90854,92699,93659,93945,96060,99699,100714,105557,105902,107838,109802,109996,113994],"is_not":false,"summary":null,"term":"GO:0000045"},{"annotations":[104693,104783],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000786"}]},"cv_name":"biological_process","definition":"The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm.","definition_xrefs":["PMID:9412464","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"is_a","term_name":"autophagosome organization","termid":"GO:1905037"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00114":null,"SJAG_00645":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01467":null,"SJAG_01561":null,"SJAG_01876":null,"SJAG_02414":null,"SJAG_02441":null,"SJAG_02640":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04294":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05017":null,"SJAG_05289":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0044085","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"autophagosome assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PAS formation","type":"narrow"},{"name":"autophagic vacuole assembly","type":"exact"},{"name":"autophagic vacuole formation","type":"related"},{"name":"autophagosome biosynthesis","type":"exact"},{"name":"autophagosome formation","type":"exact"}],"termid":"GO:0000045","terms_by_termid":{"GO:0000045":null,"GO:2000786":null}}


id: FYPO:0001238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing staurosporine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on staurosporine","synonyms":[{"name":"normal cell population growth in presence of staurosporine","type":"exact"},{"name":"normal cell population growth on staurosporine","type":"exact"},{"name":"normal cellular response to staurosporine","type":"related"},{"name":"normal vegetative cell population growth on staurosporine","type":"exact"}],"termid":"FYPO:0001238"}


id: RO:HOM0000011
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves genes that diverged after a duplication event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paralogy_relationship_with","synonyms":[{"name":"paralogous to","type":"exact"}],"termid":"RO:HOM0000011"}


id: GO:0060194
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["GOC:dph","GOC:jp","PMID:18075583","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"antisense RNA transcription","termid":"GO:0009300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"regulation of antisense RNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060194","terms_by_termid":{"GO:0060195":null}}


id: FYPO:0004835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus during cellular response to hydrogen peroxide","synonyms":[{"name":"abolished protein localisation to nucleus during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein localization to nucleus during cellular response to H2O2","type":"exact"},{"name":"abolished protein localization to nucleus during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleus during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"nuclear exclusion during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear protein exclusion during cellular response to hydrogen peroxide","type":"related"},{"name":"protein localization to nucleus abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004835"}


id: PBO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraganglioma","termid":"PBO:0002592"}


id: FYPO:0006055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is normal (i.e. indistinguishable from wild type) during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle pole body","termid":"FYPO:0003541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole body during meiosis II","synonyms":[{"name":"normal protein localisation to meiotic spindle pole body during meiosis II","type":"exact"},{"name":"normal protein localization to meiotic SPB during meiosis II","type":"exact"},{"name":"normal protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006055"}


id: PBO:0039296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG10 alpha-1,2-glucosyltransferase B","termid":"PBO:0039296"}


id: PBO:0079880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 1B","termid":"PBO:0079880"}


id: PBO:0071836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 31","termid":"PBO:0071836"}


id: PBO:0073521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding protein 4","termid":"PBO:0073521"}


id: GO:0006282
data:
  {"annotated_genes":["SJAG_00369","SJAG_03160","SJAG_01205","SJAG_00573","SJAG_04039","SJAG_02104","SJAG_03695","SJAG_03417","SJAG_03048","SJAG_04457","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71299,89923,106321],"is_not":false,"summary":null,"term":"GO:0006282"},{"annotations":[98460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[107908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[108185,113450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[103534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[102692,86939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[105450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA repair.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00573":null,"SJAG_00823":null,"SJAG_01205":null,"SJAG_02104":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03417":null,"SJAG_03695":null,"SJAG_04039":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006282","terms_by_termid":{"GO:0006282":null,"GO:0010569":null,"GO:0045739":null,"GO:1904332":null,"GO:2000779":null,"GO:2001033":null,"GO:2001034":null}}


id: PBO:0030019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_thin,_elongated_vegetative_cell","termid":"PBO:0030019"}


id: GO:1901105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetracenomycin C.","definition_xrefs":["GOC:yaf","UniPathway:UPA00174","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"tetracenomycin C metabolic process","termid":"GO:1901104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0019748","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tetracenomycin C catabolic process","synonyms":[{"name":"tetracenomycin C breakdown","type":"exact"},{"name":"tetracenomycin C catabolism","type":"exact"},{"name":"tetracenomycin C degradation","type":"exact"}],"termid":"GO:1901105"}


id: GO:0042851
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid.","definition_xrefs":["GOC:jl","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-alanine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-alanine metabolism","type":"exact"}],"termid":"GO:0042851","terms_by_termid":{"GO:0042853":null}}


id: PBO:0073330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 6","termid":"PBO:0073330"}


id: PBO:0048168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M-phase specific E3 ubiquitin protein ligase","termid":"PBO:0048168"}


id: PBO:0047047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member B","termid":"PBO:0047047"}


id: GO:0070280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxal, 3-hydroxy-5-(hydroxymethyl)-2-methylpyridine-4-carbaldehyde, a form of vitamin B6.","definition_xrefs":["GOC:mah","CHEBI:17310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyridoxal binding","termid":"GO:0070280"}


id: PBO:0087719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for stable association of Srb10p-Srb11p kinase; essential for transcriptional regulation","termid":"PBO:0087719"}


id: FYPO:0006210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ion starvation is lower than normal during spore germination. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:28572514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to copper ion starvation during vegetative growth","termid":"FYPO:0003280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion starvation during spore germination","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion starvation during spore germination","type":"related"},{"name":"decreased RNA level during cellular response to copper ion depletion during spore germination","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion deprivation during spore germination","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion starvation during spore germination during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper starvation during spore germination","type":"exact"},{"name":"decreased RNA level during copper ion starvation during spore germination","type":"exact"},{"name":"decreased mRNA level during cellular response to copper ion starvation during spore germination","type":"narrow"},{"name":"decreased transcript level during cellular response to copper ion starvation during spore germination","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion starvation during spore germination","type":"exact"}],"termid":"FYPO:0006210"}


id: GO:0070202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location on a chromosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein localization to chromosome","synonyms":[{"name":"regulation of establishment of protein localisation to chromosome","type":"exact"}],"termid":"GO:0070202"}


id: GO:0160070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of tetrahydroxoborate within a cell.","definition_xrefs":["PMID:15525507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular borate homeostasis","synonyms":[{"name":"intracellular boron homeostasis","type":"exact"},{"name":"intracellular tetrahydroxoborate homeostasis","type":"exact"}],"termid":"GO:0160070"}


id: PBO:0066841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 141","termid":"PBO:0066841"}


id: GO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process in which immunoglobulin genes are diversified through the mechanism of gene conversion.","definition_xrefs":["GOC:add","PMID:14991701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via gene conversion","termid":"GO:0002565"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"},{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"gene conversion of immunoglobulin genes","synonyms":[{"name":"gene conversion of antibody genes","type":"exact"}],"termid":"GO:0002206"}


id: PR:Q9HFE5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apm1 gene.","definition_xrefs":["UniProtKB:Q9HFE5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit mu-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.07","synonyms":[{"name":"Spom972h-apm1","type":"exact"},{"name":"clathrin assembly protein complex 1 mu-1 medium chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mu-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFE5"}


id: PBO:0014303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMR domain protein, possibly involved in DNA repair and neddylation","termid":"PBO:0014303"}


id: PBO:0064158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIC","termid":"PBO:0064158"}


id: GO:0016011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that includes alpha- and beta-dystroglycan, which are alternative products of the same gene; the laminin-binding component of the dystrophin-associated glycoprotein complex, providing a link between the subsarcolemmal cytoskeleton (in muscle cells) and the extracellular matrix. Alpha-dystroglycan is an extracellular protein binding to alpha-laminin and to beta-dystroglycan; beta-dystroglycan is a transmembrane protein which binds alpha-dystroglycan and dystrophin.","definition_xrefs":["PMID:16710609","PMID:15117830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"dystrophin-associated glycoprotein complex","termid":"GO:0016010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"dystroglycan complex","termid":"GO:0016011"}


id: GO:0004179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal amino acid, Xaa-Xbb- from a peptide, amide or arylamide. Xaa is preferably Ala, but may be most amino acids including Pro (slow action). When a terminal hydrophobic residue is followed by a prolyl residue, the two may be released as an intact Xaa-Pro dipeptide.","definition_xrefs":["EC:3.4.11.2"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane alanyl aminopeptidase activity (obsolete GO:0004179)","secondary_identifiers":["MetaCyc:3.4.11.2-RXN"],"synonyms":[{"name":"CD13","type":"related"},{"name":"L-alanine aminopeptidase activity","type":"related"},{"name":"alanine-specific aminopeptidase activity","type":"related"},{"name":"alanyl aminopeptidase activity","type":"related"},{"name":"amino-oligopeptidase activity","type":"related"},{"name":"aminopeptidase M activity","type":"narrow"},{"name":"aminopeptidase N activity","type":"narrow"},{"name":"cysteinylglycinase activity","type":"related"},{"name":"cysteinylglycine dipeptidase activity","type":"related"},{"name":"membrane alanine aminopeptidase activity","type":"narrow"},{"name":"membrane alanyl aminopeptidase activity","type":"exact"},{"name":"membrane aminopeptidase I activity","type":"narrow"},{"name":"microsomal aminopeptidase activity","type":"narrow"},{"name":"particle-bound aminopeptidase activity","type":"narrow"},{"name":"peptidase E activity","type":"broad"},{"name":"pseudo leucine aminopeptidase activity","type":"related"}],"termid":"GO:0004179"}


id: GO:0061179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the regulated release of insulin that contributes to the response of a cell to glucose.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of insulin secretion","termid":"GO:0046676"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of insulin secretion involved in cellular response to glucose stimulus","termid":"GO:0061178"},{"relation_name":"negatively_regulates","term_name":"insulin secretion involved in cellular response to glucose stimulus","termid":"GO:0035773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of insulin secretion involved in cellular response to glucose stimulus","synonyms":[{"name":"negative regulation of insulin secretion in response to glucose","type":"related"},{"name":"negative regulation of insulin secretion involved in cellular response to glucose","type":"exact"}],"termid":"GO:0061179"}


id: PBO:0082073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoserine aminotransferase; catalyzes the formation of phosphoserine from 3-phosphohydroxypyruvate, required for serine and glycine biosynthesis; regulated by the general control of amino acid biosynthesis mediated by Gcn4p; protein abundance increases in response to DNA replication stress","termid":"PBO:0082073"}


id: PBO:0084294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intracellular sporulation-specific glucoamylase; involved in glycogen degradation; induced during starvation of a/a diploids late in sporulation, but dispensable for sporulation","termid":"PBO:0084294"}


id: _global:is_kinase_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"_global:molecular_interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","secondary_identifiers":["RO:0002481"],"termid":"_global:is_kinase_activity"}


id: GO:0045997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid biosynthetic process","termid":"GO:0007554"},{"relation_name":"is_a","term_name":"negative regulation of ecdysteroid metabolic process","termid":"GO:0045965"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid biosynthetic process","termid":"GO:0045456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ecdysteroid biosynthetic process","synonyms":[{"name":"down regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"down-regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"downregulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"inhibition of ecdysteroid biosynthetic process","type":"narrow"},{"name":"negative regulation of ecdysteroid anabolism","type":"exact"},{"name":"negative regulation of ecdysteroid biosynthesis","type":"exact"},{"name":"negative regulation of ecdysteroid formation","type":"exact"},{"name":"negative regulation of ecdysteroid synthesis","type":"exact"}],"termid":"GO:0045997"}


id: PBO:0029526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_elongated_cell","termid":"PBO:0029526"}


id: GO:0003937
data:
  {"annotated_genes":["SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115159],"is_not":false,"summary":null,"term":"GO:0003937"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide.","definition_xrefs":["EC:3.5.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohydrolase activity","termid":"GO:0019238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"IMP cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73797","RHEA:18445","MetaCyc:IMPCYCLOHYDROLASE-RXN"],"synonyms":[{"name":"IMP 1,2-hydrolase (decyclizing)","type":"related"},{"name":"IMP synthetase activity","type":"related"},{"name":"inosinate cyclohydrolase activity","type":"related"},{"name":"inosinicase activity","type":"related"}],"termid":"GO:0003937","terms_by_termid":{"GO:0003937":null}}


id: PATO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis and towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotational curvature","termid":"PATO:0001787"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral and rotional curvature","termid":"PATO:0002049"}


id: PBO:0076665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor T","termid":"PBO:0076665"}


id: PBO:0029760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_after_spore_germination_with_elongated_germ_tube","termid":"PBO:0029760"}


id: FYPO:0001952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of calcium ions out of a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal calcium export","termid":"FYPO:0001951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased calcium export","synonyms":[{"name":"decreased calcium efflux from cell","type":"exact"},{"name":"decreased calcium export during mitotic cell cycle","type":"related"},{"name":"decreased calcium export during vegetative growth","type":"exact"},{"name":"decreased calcium export from cell","type":"narrow"},{"name":"decreased calcium ion export","type":"exact"},{"name":"decreased cellular calcium export","type":"exact"},{"name":"reduced calcium export","type":"exact"}],"termid":"FYPO:0001952"}


id: PBO:0071623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 41","termid":"PBO:0071623"}


id: GO:0045156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of electrons within the cyclic electron transport pathway of photosynthesis.","definition_xrefs":["ISBN:0716731363","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity","synonyms":[{"name":"cytochrome","type":"related"},{"name":"cytochrome bc1 complex","type":"narrow"}],"termid":"GO:0045156"}


id: RO:0001023
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a condition (a phenotype or disease) of a host and a material entity, in which the material entity is part of the host itself, and the condition results in pathological processes that include an abnormally strong immune response against the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_autoimmune_trigger","termid":"RO:0001023"}


id: PBO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 1","termid":"PBO:0051929"}


id: PBO:0047704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN2 pseudogene 1","termid":"PBO:0047704"}


id: PBO:0077461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 184C","termid":"PBO:0077461"}


id: PBO:0043211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 4","termid":"PBO:0043211"}


id: PBO:0066224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 27","termid":"PBO:0066224"}


id: GO:0047838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylose + NAD+ = D-xylonolactone + NADH.","definition_xrefs":["EC:1.1.1.175","MetaCyc:D-XYLOSE-1-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-xylose 1-dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:13861"],"synonyms":[{"name":"(NAD)-linked D-xylose dehydrogenase activity","type":"related"},{"name":"D-xylose 1-dehydrogenase (NAD) activity","type":"exact"},{"name":"D-xylose dehydrogenase activity","type":"related"},{"name":"D-xylose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"NAD-D-xylose","type":"related"},{"name":"NAD-D-xylose dehydrogenase activity","type":"related"},{"name":"NAD-linked D-xylose dehydrogenase activity","type":"related"}],"termid":"GO:0047838"}


id: GO:1900554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asperfuranone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"asperfuranone metabolic process","termid":"GO:1900552"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"asperfuranone biosynthetic process","synonyms":[{"name":"asperfuranone anabolism","type":"exact"},{"name":"asperfuranone biosynthesis","type":"exact"},{"name":"asperfuranone formation","type":"exact"},{"name":"asperfuranone synthesis","type":"exact"}],"termid":"GO:1900554"}


id: PBO:0060953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor kappa B subunit 1","termid":"PBO:0060953"}


id: PBO:0070634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 5","termid":"PBO:0070634"}


id: PBO:0028073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_anucleate_cell_(obsolete_FYPO:0003761)","termid":"PBO:0028073"}


id: GO:0072537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a fibroblast resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["GOC:mah","CL:0000057","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast activation","termid":"GO:0072537"}


id: GO:0042714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins on DNA or RNA to form the complex that mediates dosage compensation on one or more X chromosomes.","definition_xrefs":["PMID:11102361","GOC:jl","PMID:12672493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"sex-chromosome dosage compensation","termid":"GO:0007549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0006325"],"is_obsolete":false,"name":"dosage compensation complex assembly","termid":"GO:0042714"}


id: GO:0010462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of light-activated voltage-gated calcium channel activity.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of light-activated voltage-gated calcium channel activity (obsolete GO:0010462)","termid":"GO:0010462"}


id: GO:0061259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the glomerular mesangial cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric mesangial cell differentiation","termid":"GO:0061260"},{"relation_name":"is_a","term_name":"glomerular mesangial cell differentiation","termid":"GO:0072008"},{"relation_name":"part_of","term_name":"mesonephric glomerular mesangium development","termid":"GO:0061247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangial cell differentiation","termid":"GO:0061259"}


id: GO:1905521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage migration.","definition_xrefs":["PMID:25749876","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage migration","termid":"GO:1905521"}


id: PBO:0072567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRBP1 pseudogene 2","termid":"PBO:0072567"}


id: PBO:0081259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 29, pseudogene","termid":"PBO:0081259"}


id: GO:0033875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ribonucleoside bisphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside bisphosphate metabolic process","synonyms":[{"name":"ribonucleoside bisphosphate metabolism","type":"exact"}],"termid":"GO:0033875"}


id: GO:0070264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIE contains a specific subset of ribosomal proteins.","definition_xrefs":["GOC:jp","PMID:19116144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIIE complex","termid":"GO:0070264"}


id: GO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a calcium channel in the bitten organism.","definition_xrefs":["GOC:jl","PMID:20920515","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of calcium channel activity in another organism","termid":"GO:0044472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044473"}


id: PBO:0069049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 295, pseudogene","termid":"PBO:0069049"}


id: PBO:0055575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3011","termid":"PBO:0055575"}


id: GO:0033564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone is directed to a specific target site along the anterior-posterior body axis in response to a combination of attractive and repulsive cues. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior axon guidance","synonyms":[{"name":"anterior-posterior axon guidance","type":"exact"},{"name":"anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:0033564"}


id: PBO:0038420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A1BG antisense RNA 1","termid":"PBO:0038420"}


id: PBO:0078334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-6","termid":"PBO:0078334"}


id: GO:0001925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of B-1 B cell differentiation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B-1 B cell differentiation","termid":"GO:0001924"},{"relation_name":"is_a","term_name":"negative regulation of B cell differentiation","termid":"GO:0045578"},{"relation_name":"negatively_regulates","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B-1 B cell differentiation","synonyms":[{"name":"down regulation of B-1 B cell differentiation","type":"exact"},{"name":"down-regulation of B-1 B cell differentiation","type":"exact"},{"name":"downregulation of B-1 B cell differentiation","type":"exact"},{"name":"inhibition of B-1 B cell differentiation","type":"narrow"},{"name":"negative regulation of B-1 B cell development","type":"related"},{"name":"negative regulation of B-1 B lymphocyte differentiation","type":"exact"},{"name":"negative regulation of B-1 B-cell differentiation","type":"exact"},{"name":"negative regulation of B-1 B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0001925"}


id: PBO:0030318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_oleoyl-CoA_ligase_activity","termid":"PBO:0030318"}


id: GO:0018215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by phosphopantetheinylation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein phosphopantetheinylation","synonyms":[{"name":"protein amino acid phosphopantetheinylation","type":"exact"}],"termid":"GO:0018215"}


id: PBO:0056795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"milk fat globule EGF and factor V/VIII domain containing","termid":"PBO:0056795"}


id: PBO:0091982
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective Meiosis and Sporulation","termid":"PBO:0091982"}


id: GO:1903287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion import across the plasma membrane.","definition_xrefs":["GOC:rl","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:10636900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transport","termid":"GO:1901380"},{"relation_name":"is_a","term_name":"regulation of potassium ion import","termid":"GO:1903286"},{"relation_name":"negatively_regulates","term_name":"potassium ion import across plasma membrane","termid":"GO:1990573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of potassium ion import across plasma membrane","synonyms":[{"name":"down regulation of potassium import","type":"broad"},{"name":"down regulation of potassium ion import","type":"broad"},{"name":"down regulation of potassium ion uptake","type":"broad"},{"name":"down-regulation of potassium import","type":"broad"},{"name":"down-regulation of potassium ion import","type":"broad"},{"name":"down-regulation of potassium ion uptake","type":"broad"},{"name":"downregulation of potassium import","type":"broad"},{"name":"downregulation of potassium ion import","type":"broad"},{"name":"downregulation of potassium ion uptake","type":"broad"},{"name":"inhibition of potassium import","type":"narrow"},{"name":"inhibition of potassium ion import","type":"narrow"},{"name":"inhibition of potassium ion uptake","type":"narrow"},{"name":"negative regulation of potassium import","type":"broad"},{"name":"negative regulation of potassium ion import","type":"broad"},{"name":"negative regulation of potassium ion uptake","type":"broad"}],"termid":"GO:1903287"}


id: PBO:0079550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 3","termid":"PBO:0079550"}


id: PBO:0028810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0028810"}


id: PBO:0045879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 3","termid":"PBO:0045879"}


id: PBO:0005179
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia","termid":"PBO:0005179"}


id: PBO:0076902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 56, pseudogene","termid":"PBO:0076902"}


id: GO:0031604
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits forming the outer ring of the core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, alpha-subunit complex","termid":"GO:0019773"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome core complex","termid":"GO:0031601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear proteasome core complex, alpha-subunit complex","termid":"GO:0031604"}


id: PBO:0110325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR2 pseudogene 1","termid":"PBO:0110325"}


id: GO:0000332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Provision of the template used by reverse transcriptase to synthesize the G-rich strand of telomeric DNA.","definition_xrefs":["PMID:11812242","PMID:7958872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA template activity","termid":"GO:0000497"},{"relation_name":"part_of","term_name":"telomerase activity","termid":"GO:0003720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"part_of","termid":"GO:0016779"},{"rel_name":"part_of","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"part_of","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003824","GO:0005488","GO:0016779","GO:0140097","GO:0016740","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"template for synthesis of G-rich strand of telomere DNA activity","synonyms":[{"name":"telomerase RNA","type":"exact"},{"name":"telomerase, template","type":"exact"}],"termid":"GO:0000332"}


id: FYPO:0000993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3-phosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphatidylinositol-3-phosphate level","termid":"FYPO:0000992"},{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3-phosphate level","synonyms":[{"name":"decreased PI-3-P accumulation","type":"related"},{"name":"decreased cellular PI(3)P level","type":"exact"},{"name":"decreased cellular PI-3-P level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3-phosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3-phosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3-phosphate level","type":"exact"}],"termid":"FYPO:0000993"}


id: PBO:0062987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PACRG antisense RNA 2","termid":"PBO:0062987"}


id: GO:0060772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial pattern formation process that results in the formation of leaf primordia around the center of a shoot apical meristem.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllotactic patterning","termid":"GO:0060771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf phyllotactic patterning","termid":"GO:0060772"}


id: GO:0090337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.","definition_xrefs":["GOC:jh","PMID:12810699","PMID:15923184","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"regulates","term_name":"formin-nucleated actin cable assembly","termid":"GO:0070649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of formin-nucleated actin cable assembly","termid":"GO:0090337"}


id: GO:0106240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:O2 + peregrinol + reduced [NADPH--hemoprotein reductase] = H+ + H2O + labd-13Z-ene-9,15,16-triol + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:29315936","GOC:eab","RHEA:62192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"labd-13Z-ene-9,15,16-triol synthase activity","termid":"GO:0106240"}


id: PBO:0073429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a, subunit 3 pseudogene 1","termid":"PBO:0073429"}


id: PBO:0046307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal-neural cortex 1","termid":"PBO:0046307"}


id: GO:2001023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to drug.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to xenobiotic stimulus","termid":"GO:0009410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to drug","synonyms":[{"name":"regulation of drug resistance","type":"related"},{"name":"regulation of drug susceptibility/resistance","type":"related"}],"termid":"GO:2001023"}


id: _global:integral_part_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X integral_part_of Y if and only if: X part_of Y and Y has_part X.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral_part_of","termid":"_global:integral_part_of"}


id: GO:0005678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin assembly complex (obsolete GO:0005678)","synonyms":[{"name":"chromatin assembly complex","type":"exact"},{"name":"nucleosome assembly complex","type":"narrow"}],"termid":"GO:0005678"}


id: PBO:0000329
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minichromosome InStability","termid":"PBO:0000329"}


id: PBO:0066704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 1","termid":"PBO:0066704"}


id: PBO:0066939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 241","termid":"PBO:0066939"}


id: PBO:0061864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized low density lipoprotein receptor 1","termid":"PBO:0061864"}


id: GO:0042766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of nucleosomes along a DNA fragment.","definition_xrefs":["PMID:12006495"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosome mobilization (obsolete GO:0042766)","synonyms":[{"name":"nucleosome sliding","type":"exact"}],"termid":"GO:0042766"}


id: SO:0001193
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of GNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"GNA","termid":"SO:0001192"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Glycerol_nucleic_acid"],"synonyms":[{"name":"GNA oligo","type":"exact"},{"name":"glycerol nucleic acid","type":"exact"},{"name":"glycol nucleic acid","type":"exact"}],"termid":"SO:0001193"}


id: FYPO:0007040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal alkaline phosphatase activity","termid":"FYPO:0007040"}


id: PBO:0081187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc fingers and homeoboxes 3","termid":"PBO:0081187"}


id: PBO:0040309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 1","termid":"PBO:0040309"}


id: GO:0140664
data:
  {"annotated_genes":["SJAG_00757","SJAG_02226","SJAG_01620","SJAG_02267","SJAG_01410","SJAG_02187","SJAG_01807","SJAG_02748","SJAG_01419","SJAG_02708"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84632,87785,88703,92990,95149,96636,96668,100688,102186,112616],"is_not":false,"summary":null,"term":"GO:0140664"}]},"cv_name":"molecular_function","definition":"A molecule that recognises toxic DNA structures, and initiates a signaling response, driven by ATP hydrolysis.","definition_xrefs":["PMID:33510387","PMID:33302090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"},{"relation_name":"is_a","term_name":"DNA damage sensor activity","termid":"GO:0140612"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0003824","GO:0098772","GO:0003674","GO:0140097","GO:0140299"],"is_obsolete":false,"name":"ATP-dependent DNA damage sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent DNA damage sensing activity","type":"exact"}],"termid":"GO:0140664","terms_by_termid":{"GO:0140664":null}}


id: GO:0090553
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection part that is the apical most portion of a unicellular trichome apex.","definition_xrefs":["GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"unicellular trichome apex","termid":"GO:0090552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unicellular trichome tip","termid":"GO:0090553"}


id: FYPO:0005854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin cables is increased.","definition_xrefs":["PomBase:mah","PMID:12764130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"increased actin cable assembly","synonyms":[{"name":"actin bundling increased","type":"related"},{"name":"increased actin bundling","type":"related"},{"name":"increased actin cable assembly during mitotic cell cycle","type":"related"},{"name":"increased actin cable assembly during vegetative growth","type":"exact"},{"name":"increased formin-nucleated actin cable assembly","type":"exact"}],"termid":"FYPO:0005854"}


id: FYPO:0000384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of macroautophagy is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased macroautophagy","synonyms":[{"name":"autophagy: increased","type":"broad"}],"termid":"FYPO:0000384"}


id: PBO:0005909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonate/alpha-ketoglutare dioxygenase (predicted)","termid":"PBO:0005909"}


id: PBO:0085533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S30, no bacterial homolog; RPS30B has a paralog, RPS30A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085533"}


id: PBO:0081136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP30 zinc finger protein","termid":"PBO:0081136"}


id: PBO:0047553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF10 antisense RNA 1","termid":"PBO:0047553"}


id: FYPO:0002668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002668"}


id: PBO:0076704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF4 antisense RNA 1","termid":"PBO:0076704"}


id: FYPO:0005272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule plus-end directed mitotic chromosome migration does not occur. In microtubule plus-end directed mitotic chromosome migration, chromosomes that are laterally attached to one or more mitotic spindle microtubules migrate towards the spindle equator via plus-end-directed movement along the microtubules.","definition_xrefs":["GO:0099606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule plus-end directed mitotic chromosome migration","termid":"FYPO:0005271"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000138","FYPO:0000337","FYPO:0000641","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished microtubule plus-end directed mitotic chromosome migration","synonyms":[{"name":"abolished microtubule plus-end directed chromosome migration during mitosis","type":"exact"},{"name":"abolished microtubule plus-end directed mitotic chromosome migration during vegetative growth","type":"exact"},{"name":"abolished microtubule plus-end-directed mitotic chromosome migration","type":"exact"},{"name":"abolished plus-end directed chromosome gliding","type":"exact"},{"name":"microtubule plus-end directed mitotic chromosome migration abolished","type":"exact"}],"termid":"FYPO:0005272"}


id: GO:0044530
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Multicomponent complex of RNA and proteins that is composed of four active spliceosomes, termed native spliceosomes, connected to each other by the pre-mRNA. The supraspliceosome is the nuclear machine where the pre-mRNA processing takes place, like the 5'-end capping, 3'-end cleavage, splicing and editing.","definition_xrefs":["GOC:jl","PMID:19282290","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"supraspliceosomal complex","synonyms":[{"name":"supraspliceosome complex","type":"exact"}],"termid":"GO:0044530"}


id: GO:0043155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the light-dependent reaction of photosynthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"},{"relation_name":"is_a","term_name":"negative regulation of photosynthesis","termid":"GO:1905156"},{"relation_name":"negatively_regulates","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of photosynthesis, light reaction","synonyms":[{"name":"down regulation of photosynthesis, light reaction","type":"exact"},{"name":"down-regulation of photosynthesis, light reaction","type":"exact"},{"name":"downregulation of photosynthesis, light reaction","type":"exact"},{"name":"inhibition of photosynthesis, light reaction","type":"narrow"}],"termid":"GO:0043155"}


id: PBO:0029243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_caffeine","termid":"PBO:0029243"}


id: GO:0003376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by sphingosine-1-phosphate binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:ascb_2009","PMID:22001186","PMID:14592418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"sphingolipid mediated signaling pathway","termid":"GO:0090520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sphingosine-1-phosphate receptor signaling pathway","secondary_identifiers":["GO:0001789"],"synonyms":[{"name":"S1P receptor signaling pathway","type":"exact"},{"name":"S1P signaling pathway","type":"related"},{"name":"S1P-activated G-protein coupled receptor signaling pathway","type":"exact"},{"name":"S1P-activated GPCR signaling pathway","type":"exact"},{"name":"S1P-stimulated signal transduction pathway","type":"exact"},{"name":"sphingolipid signaling pathway","type":"broad"},{"name":"sphingolipid signalling pathway","type":"broad"}],"termid":"GO:0003376"}


id: PBO:0028338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_DNA_level_during_vegetative_growth","termid":"PBO:0028338"}


id: PBO:0074688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 68","termid":"PBO:0074688"}


id: PR:Q9HDX5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ARV1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14467:SF0","PRO:DNx","OMA:SCHPO00777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arv1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.15","secondary_identifiers":["UniProtKB:Q9HDX5"],"synonyms":[{"name":"Spom972h-ARV1","type":"exact"}],"termid":"PR:Q9HDX5"}


id: PBO:0091532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin bimC subfamily","termid":"PBO:0091532"}


id: PBO:0054141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1507","termid":"PBO:0054141"}


id: GO:0047598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + NADP+ = 7-dehydrocholesterol + H+ + NADPH.","definition_xrefs":["RHEA:23984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"7-dehydrocholesterol reductase activity","secondary_identifiers":["EC:1.3.1.21","MetaCyc:RXN66-323","Reactome:R-HSA-196402","Reactome:R-HSA-6807055"],"synonyms":[{"name":"7-DHC reductase activity","type":"related"},{"name":"cholesterol:NADP+ delta7-oxidoreductase activity","type":"related"},{"name":"sterol Delta(7)-reductase activity","type":"broad"},{"name":"sterol delta7-reductase activity","type":"related"}],"termid":"GO:0047598"}


id: PBO:0084409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysophospholipase; hydrolyzes lysophosphatidylserine to release free fatty acid; involved in regulated cell death; localizes to both the nucleus and cytoplasm; contains a catalytic triad of Ser-His-Asp that is part of an alpha/beta hydrolase fold and a lipase motif (GXSXG); sequence similarity to Fsh2p and Fsh3p and the human candidate tumor suppressor and serine hydrolase, OVCA2","termid":"PBO:0084409"}


id: GO:0098543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from another organism is received and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of other organism","secondary_identifiers":["GO:0051824"],"synonyms":[{"name":"recognition of other organism during symbiotic interaction","type":"narrow"},{"name":"recognition of other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0098543"}


id: PBO:0076922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor CP2","termid":"PBO:0076922"}


id: PBO:0045556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 8","termid":"PBO:0045556"}


id: PBO:0077140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 1","termid":"PBO:0077140"}


id: PBO:0086854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; associates with mRNAs encoding cell wall proteins in high-throughput studies; deletion mutants display increased sensitivity to some cell wall disrupting agents; expression negatively regulated by cAMP","termid":"PBO:0086854"}


id: PBO:0070163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 77 pseudogene","termid":"PBO:0070163"}


id: FYPO:0001753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow normally (i.e. indistinguishably from wild type) under anaerobic conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal anaerobic cell population growth","synonyms":[{"name":"normal anaerobic growth","type":"broad"}],"termid":"FYPO:0001753"}


id: PBO:0004856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn13a","termid":"PBO:0004856"}


id: PBO:0003046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght4","termid":"PBO:0003046"}


id: GO:0106057
data:
  {"annotated_genes":["SJAG_03799","SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97078,112298],"is_not":false,"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcineurin-mediated signaling.","definition_xrefs":["PMID:25081204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium-mediated signaling","termid":"GO:0050849"},{"relation_name":"is_a","term_name":"regulation of calcineurin-mediated signaling","termid":"GO:0106056"},{"relation_name":"negatively_regulates","term_name":"calcineurin-mediated signaling","termid":"GO:0097720"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03799":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcineurin-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106057","terms_by_termid":{"GO:0106057":null}}


id: PR:O14293
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atd1 gene.","definition_xrefs":["UniProtKB:O14293","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase-like protein C9E9.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.09c","synonyms":[{"name":"Spom972h-atd1","type":"exact"}],"termid":"PR:O14293"}


id: RO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite that kills or sterilizes its host","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasitoid_of","termid":"RO:0002208"}


id: FYPO:0006881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phytoceramide measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phytoceramide level","synonyms":[{"name":"decreased cellular phytoceramide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phytoceramide level during vegetative growth","type":"exact"},{"name":"decreased phytoceramide accumulation","type":"related"},{"name":"reduced cellular phytoceramide level","type":"exact"}],"termid":"FYPO:0006881"}


id: PBO:0013798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, nucleoporin Nup37","termid":"PBO:0013798"}


id: PR:O14093
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 54 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12965:SF0","PRO:DNx","OMA:SCHPO01639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.10","secondary_identifiers":["UniProtKB:O14093"],"synonyms":[{"name":"Spom972h-VPS54","type":"exact"}],"termid":"PR:O14093"}


id: PBO:0062914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2X 6","termid":"PBO:0062914"}


id: GO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antimicrobial peptide production.","definition_xrefs":["GOC:add","PMID:11807545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"positive regulation of antimicrobial humoral response","termid":"GO:0002760"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"positively_regulates","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antimicrobial peptide production","synonyms":[{"name":"activation of antimicrobial peptide production","type":"narrow"},{"name":"antimicrobial peptide induction","type":"exact"},{"name":"stimulation of antimicrobial peptide production","type":"narrow"},{"name":"up regulation of antimicrobial peptide production","type":"exact"},{"name":"up-regulation of antimicrobial peptide production","type":"exact"},{"name":"upregulation of antimicrobial peptide production","type":"exact"}],"termid":"GO:0002225"}


id: PBO:0091463
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ell Binding Protein","termid":"PBO:0091463"}


id: GO:0060500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the initial primordium of the lung is formed.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in lung bud formation (obsolete GO:0060500)","termid":"GO:0060500"}


id: PBO:0067967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 269","termid":"PBO:0067967"}


id: PBO:0064496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLR1H antisense, pseudogene","termid":"PBO:0064496"}


id: PBO:0077158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 1, transcriptional corepressor","termid":"PBO:0077158"}


id: PBO:0077318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 53","termid":"PBO:0077318"}


id: GO:0048693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of collateral sprouting of an injured axon.","definition_xrefs":["GOC:lm","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of collateral sprouting","termid":"GO:0048670"},{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"regulates","term_name":"collateral sprouting of injured axon","termid":"GO:0048674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collateral sprouting of injured axon","termid":"GO:0048693"}


id: MOD:01751
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-129 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"},{"relation_name":"derives_from","term_name":"cysTMT6plex-129 reporter+balance reagent cysteine disulfide","termid":"MOD:01826"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-129 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-129 reporter fragment","type":"exact"}],"termid":"MOD:01751"}


id: SO:0001202
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ambisense_RNA_virus is a ss_RNA_viral_sequence that is the sequence of a single stranded RNA virus with both messenger and anti messenger polarity.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_RNA_viral_sequence","termid":"SO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ambisense_ssRNA_viral_sequence","synonyms":[{"name":"ambisense single stranded RNA virus","type":"exact"},{"name":"ambisense ssRNA viral sequence","type":"exact"}],"termid":"SO:0001202"}


id: PBO:0044408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily F member 1","termid":"PBO:0044408"}


id: PR:O13947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial tRNA-specific 2-thiouridylase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11933:SF0","PRO:DNx","OMA:SCHPO00647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA-specific 2-thiouridylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.04","secondary_identifiers":["UniProtKB:O13947"],"synonyms":[{"name":"Spom972h-TRMU","type":"exact"}],"termid":"PR:O13947"}


id: PBO:0084615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloprotease; involved in N-terminal processing of pro-a-factor to mature form; expressed in both haploids and diploids; one of two yeast homologs of human insulin-degrading enzyme (hIDE); homolog Axl1p is also involved in processing of pro-a-factor","termid":"PBO:0084615"}


id: PBO:0062988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PACRG antisense RNA 3","termid":"PBO:0062988"}


id: PBO:0016902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U3","termid":"PBO:0016902"}


id: PBO:0064454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pogo transposable element derived with KRAB domain","termid":"PBO:0064454"}


id: PBO:0042701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF2 antisense RNA 1","termid":"PBO:0042701"}


id: PBO:0086019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; associates with rDNA chromatin in vivo; TBS1 has a paralog, HAL9, that arose from the whole genome duplication","termid":"PBO:0086019"}


id: FYPO:0001211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Glc3Man9GlcNAc measured in a cell is too low to detect. Glc3Man9GlcNAc2 is an N-glycan that is involved in post-translational modification of proteins, and consists of a branched ten-membered mannooligosaccharide containing three D-glucose residues, nine D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["PMID:9813085","CHEBI:53019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide absent from cell","termid":"FYPO:0001209"},{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"Glc3Man9GlcNAc absent from cell","synonyms":[{"name":"G3M9 glycan absent from cell","type":"exact"},{"name":"Glc3Man9GlcNAc absent from cell during mitotic cell cycle","type":"related"},{"name":"Glc3Man9GlcNAc absent from cell during vegetative growth","type":"exact"},{"name":"Glc3Man9GlcNAc2 absent from cell","type":"exact"},{"name":"absent Glc3Man9GlcNAc","type":"exact"}],"termid":"FYPO:0001211"}


id: PBO:0028940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(U)_polymerase_activity","termid":"PBO:0028940"}


id: PATO:0001488
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a cell by virtue of whether the bearer exhibits the ability to move spontaneously.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular motility","termid":"PATO:0001488"}


id: PBO:0071210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 51","termid":"PBO:0071210"}


id: GO:0031858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pituitary adenylate cyclase-activating polypeptide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"pituitary adenylate cyclase-activating polypeptide receptor binding","synonyms":[{"name":"PACAP receptor binding","type":"exact"},{"name":"pituitary adenylate cyclase activating peptide receptor binding","type":"exact"},{"name":"pituitary adenylate cyclase-activating peptide receptor ligand","type":"narrow"}],"termid":"GO:0031858"}


id: PBO:0053957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1264","termid":"PBO:0053957"}


id: PBO:0111682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase/lipase implicated in lipid catobolism or detoxification","termid":"PBO:0111682"}


id: PBO:0046255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 4","termid":"PBO:0046255"}


id: PBO:0051839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor substrate 1","termid":"PBO:0051839"}


id: PBO:0035851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035851"}


id: GO:0110107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of imaginal disc-derived wing vein specification.","definition_xrefs":["GOC:ha","PMID:11861482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"imaginal disc-derived wing vein specification","termid":"GO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc-derived wing vein specification","termid":"GO:0110107"}


id: PBO:0065672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type T","termid":"PBO:0065672"}


id: GO:1905362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endosomal vesicle fusion.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:26911690","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of endosomal vesicle fusion","termid":"GO:1905364"},{"relation_name":"negatively_regulates","term_name":"endosomal vesicle fusion","termid":"GO:0034058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of endosomal vesicle fusion","synonyms":[{"name":"down regulation of endosomal vesicle fusion","type":"exact"},{"name":"down regulation of endosome vesicle fusion","type":"exact"},{"name":"down-regulation of endosomal vesicle fusion","type":"exact"},{"name":"down-regulation of endosome vesicle fusion","type":"exact"},{"name":"downregulation of endosomal vesicle fusion","type":"exact"},{"name":"downregulation of endosome vesicle fusion","type":"exact"},{"name":"inhibition of endosomal vesicle fusion","type":"narrow"},{"name":"inhibition of endosome vesicle fusion","type":"narrow"},{"name":"negative regulation of endosome vesicle fusion","type":"exact"}],"termid":"GO:1905362"}


id: GO:0015833
data:
  {"annotated_genes":["SJAG_01983","SJAG_00922","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91578,99118,104111],"is_not":false,"summary":null,"term":"GO:0015833"}]},"cv_name":"biological_process","definition":"The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01660":null,"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"peptide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015833","terms_by_termid":{"GO:0015833":null}}


id: FYPO:0000516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear import is normal (i.e. indistinguishable from wild type). Nuclear import is the directed movement of any substance into the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleocytoplasmic transport","termid":"FYPO:0008138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear import","synonyms":[{"name":"normal nuclear import during mitotic cell cycle","type":"related"},{"name":"normal nuclear import during vegetative growth","type":"exact"},{"name":"nuclear import: normal","type":"related"}],"termid":"FYPO:0000516"}


id: PBO:0014243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit Mdm10 (predicted)","termid":"PBO:0014243"}


id: PBO:0072446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 10","termid":"PBO:0072446"}


id: PBO:0052149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel interacting protein 4","termid":"PBO:0052149"}


id: _global:starts
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X starts Y if X is part of Y, and A and Y share a 5' or N-terminal boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts","termid":"_global:starts"}


id: PBO:0085500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein arginine N-methyltransferase; exhibits septin and Hsl1p-dependent localization to the bud neck in budded cells and periodic Hsl1p-dependent phosphorylation; required with Hsl1p, and Elm1p for the mother-bud neck recruitment, phosphorylation, and degradation of Swe1p; responsible for symmetric dimethylation of histone H4 on Arg3; relocalizes away from bud neck upon DNA replication stress; human homolog PRMT5 can complement yeast hsl7 mutant","termid":"PBO:0085500"}


id: GO:0035218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the leg imaginal disc over time, from its initial formation through to its metamorphosis to form adult structures including the leg, coxa and ventral thoracic pleura.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leg disc development","termid":"GO:0035218"}


id: GO:0034501
data:
  {"annotated_genes":["SJAG_04126","SJAG_03540","SJAG_03327","SJAG_01297","SJAG_04259","SJAG_02336","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97417,97884,109944],"is_not":false,"summary":null,"term":"GO:0034501"},{"annotations":[100018,104395,114840,96469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the kinetochore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, centromeric region","termid":"GO:0071459"},{"relation_name":"is_a","term_name":"protein localization to condensed chromosome","termid":"GO:1903083"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03327":null,"SJAG_03540":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"condensin localization to kinetochore","type":"narrow"},{"name":"protein localisation to kinetochore","type":"exact"}],"termid":"GO:0034501","terms_by_termid":{"GO:0034501":null,"GO:0140210":null}}


id: GO:0110093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile nucleus furthest from the direction of movement.","definition_xrefs":["GOC:kmv","PMID:24335254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleus lagging edge","termid":"GO:0110093"}


id: PBO:0082371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor","termid":"PBO:0082371"}


id: GO:0075193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont haustorium mother cell formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"haustorium mother cell formation","termid":"GO:0075192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of haustorium mother cell formation","synonyms":[{"name":"regulation of haustorium mother cell formation on or near host","type":"exact"}],"termid":"GO:0075193"}


id: GO:0050757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of the enzyme thymidylate synthase, which catalyzes the reaction: 5,10-methylenetetrahydrofolate + dUMP = dihydrofolate + dTMP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thymidylate synthase biosynthetic process (obsolete GO:0050757)","synonyms":[{"name":"thymidylate synthase anabolism","type":"exact"},{"name":"thymidylate synthase biosynthesis","type":"exact"},{"name":"thymidylate synthase formation","type":"exact"},{"name":"thymidylate synthase synthesis","type":"exact"}],"termid":"GO:0050757"}


id: GO:0018427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of copper into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"copper incorporation into metallo-sulfur cluster","synonyms":[{"name":"copper incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018427"}


id: PBO:0089761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific family with conserved tryptophan","termid":"PBO:0089761"}


id: GO:0043981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 5 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K5 acetylation (obsolete GO:0043981)","synonyms":[{"name":"histone H4 acetylation at K5","type":"exact"}],"termid":"GO:0043981"}


id: PBO:0056331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 12","termid":"PBO:0056331"}


id: PBO:0063875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class F pseudogene 1","termid":"PBO:0063875"}


id: PBO:0058871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9903","termid":"PBO:0058871"}


id: PBO:0088142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar RNase of the T(2) family; relocalizes to the cytosol where it cleaves tRNAs upon oxidative or stationary phase stress; required for tRNA-specific translational pausing during oxidative stress; promotes apoptosis under stress conditions and this function is independent of Rny1p catalytic activity","termid":"PBO:0088142"}


id: GO:0060478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The calcium ion regulated exocytosis which results in fusion of the acrosomal vesicle with the plasma membrane of the sperm as part of the acrosome reaction.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"},{"relation_name":"part_of","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"acrosomal vesicle exocytosis","synonyms":[{"name":"acrosomal granule exocytosis","type":"related"},{"name":"acrosome exocytosis","type":"exact"}],"termid":"GO:0060478"}


id: PBO:0018292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med19","termid":"PBO:0018292"}


id: PBO:0029650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleus_location","termid":"PBO:0029650"}


id: PBO:0041209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 1 pseudogene 1","termid":"PBO:0041209"}


id: PBO:0042851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 61","termid":"PBO:0042851"}


id: FYPO:0006928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which one or both nuclear membrane(s) form blebs. Membrane blebbing usually leads to decreases in nuclear size and the nucleus:cytoplasm volume ratio.","definition_xrefs":["PomBase:mah","PMID:31015410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"nuclear membrane blebbing","synonyms":[{"name":"nuclear envelope blebbing","type":"related"},{"name":"nuclear membrane blebbing during mitotic cell cycle","type":"related"},{"name":"nuclear membrane blebbing during vegetative growth","type":"exact"}],"termid":"FYPO:0006928"}


id: PBO:0005668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell end marker Tea1","termid":"PBO:0005668"}


id: GO:0000354
data:
  {"annotated_genes":["SJAG_04230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114011],"is_not":false,"summary":null,"term":"GO:0000354"}]},"cv_name":"biological_process","definition":"Assembly of a spliceosomal complex containing the intact pre-mRNA and all of the spliceosomal snRNPs. This occurs when the tri-snRNP associates with the pre-mRNA and associated snRNPs in an ATP-dependent manner.","definition_xrefs":["ISBN:0879695897","GOC:krc","GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"},{"relation_name":"part_of","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0065003","GO:0044085","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"cis assembly of pre-catalytic spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000360","GO:0000361"],"synonyms":[{"name":"cis assembly of U12-type pre-catalytic spliceosome","type":"narrow"},{"name":"cis assembly of U2-type pre-catalytic spliceosome","type":"narrow"},{"name":"formation of spliceosomal A2-1 complex","type":"narrow"},{"name":"formation of spliceosomal B1 complex","type":"narrow"},{"name":"spliceosomal A2-1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A2-1 complex formation","type":"narrow"},{"name":"spliceosomal B1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal B1 complex formation","type":"narrow"}],"termid":"GO:0000354","terms_by_termid":{"GO:0000354":null}}


id: PR:O13765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lariat debranching enzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12849:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lariat debranching enzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.02c","secondary_identifiers":["UniProtKB:O13765"],"synonyms":[{"name":"SPAC17A5.02c","type":"related"},{"name":"Spom972h-DBR1","type":"exact"}],"termid":"PR:O13765"}


id: PBO:0025419
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic disorders","termid":"PBO:0025419"}


id: GO:0032493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipoprotein stimulus.","definition_xrefs":["GOC:add","PMID:12077222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bacterial lipoprotein","termid":"GO:0032493"}


id: PBO:0074293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcolemma associated protein","termid":"PBO:0074293"}


id: PBO:0076423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 10","termid":"PBO:0076423"}


id: GO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protease or a peptidase.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protease binding","secondary_identifiers":["Reactome:R-HSA-1297354"],"termid":"GO:0002020"}


id: GO:0015847
data:
  {"annotated_genes":["SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103203],"is_not":false,"summary":null,"term":"GO:0015847"}]},"cv_name":"biological_process","definition":"The directed movement of putrescine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Putrescine is 1,4-diaminobutane, the polyamine formed by decarboxylation of ornithine and the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"polyamine transport","termid":"GO:0015846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"putrescine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015847","terms_by_termid":{"GO:0015847":null}}


id: PBO:0034488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_boundary_element_IRC1L","termid":"PBO:0034488"}


id: PBO:0038427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-2-macroglobulin pseudogene 1","termid":"PBO:0038427"}


id: GO:1903438
data:
  {"annotated_genes":["SJAG_04597","SJAG_01188","SJAG_04776","SJAG_01805","SJAG_05290","SJAG_03342","SJAG_03631","SJAG_01787","SJAG_04468","SJAG_02392","SJAG_00845","SJAG_01114","SJAG_02838","SJAG_00514","SJAG_03704","SJAG_04666","SJAG_03581","SJAG_00082","SJAG_03936"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86030,90452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[90453,106660,83573,109516,90623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[91908,86800,115627,106904,99817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[109517,102499,103169,101293,114072,89843,85273,85900,111633,88441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[83574,90456,88442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GO_REF:0000058","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinesis","termid":"GO:1903490"},{"relation_name":"positively_regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"activation of mitotic cytokinetic process","type":"narrow"},{"name":"up regulation of mitotic cytokinetic process","type":"exact"},{"name":"up-regulation of mitotic cytokinetic process","type":"exact"},{"name":"upregulation of mitotic cytokinetic process","type":"exact"}],"termid":"GO:1903438","terms_by_termid":{"GO:0140281":null,"GO:1903473":null,"GO:1903501":null,"GO:1903617":null,"GO:1905758":null}}


id: PR:O74556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC970.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase C970.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.02","synonyms":[{"name":"Spom972h-SPCC970.02","type":"exact"},{"name":"endo-alpha-1->6-D-mannanase C970.02 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74556"}


id: GO:0004416
data:
  {"annotated_genes":["SJAG_01596"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96407],"is_not":false,"summary":null,"term":"GO:0004416"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-(2-hydroxyacyl)glutathione + H2O = glutathione + a 2-hydroxy carboxylate.","definition_xrefs":["EC:3.1.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01596":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:25245","MetaCyc:GLYOXII-RXN","Reactome:R-HSA-6783221"],"synonyms":[{"name":"S-(2-hydroxyacyl)glutathione hydrolase activity","type":"related"},{"name":"S-2-hydroxylacylglutathione hydrolase activity","type":"related"},{"name":"acetoacetylglutathione hydrolase activity","type":"related"},{"name":"glyoxalase II activity","type":"related"}],"termid":"GO:0004416","terms_by_termid":{"GO:0004416":null}}


id: PR:O74330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S27-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11594:SF0","PRO:DNx","OMA:SCHPO02489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.10","secondary_identifiers":["UniProtKB:O74330"],"synonyms":[{"name":"Spom972h-RPS27L","type":"exact"}],"termid":"PR:O74330"}


id: PR:Q09823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec10 gene.","definition_xrefs":["UniProtKB:Q09823","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.04c","synonyms":[{"name":"Spom972h-rec10","type":"exact"}],"termid":"PR:Q09823"}


id: GO:1900756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protein processing that takes place in the phagosome. Most protein processing in the phagosome represents protein degradation.","definition_xrefs":["GOC:TermGenie","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"protein processing in phagocytic vesicle","synonyms":[{"name":"peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"peptidolysis during protein maturation in phagosome","type":"related"},{"name":"protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"protein maturation by proteolysis in phagosome","type":"related"},{"name":"protein processing in phagosome","type":"exact"}],"termid":"GO:1900756"}


id: GO:0070107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070107"}


id: PBO:0076689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 6","termid":"PBO:0076689"}


id: PBO:0080889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein C2","termid":"PBO:0080889"}


id: PBO:0079016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TruB pseudouridine synthase family member 1","termid":"PBO:0079016"}


id: GO:1900856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of fumitremorgin B biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of fumitremorgin B biosynthetic process (obsolete GO:1900856)","synonyms":[{"name":"down regulation of fumitremorgin B biosynthetic process","type":"exact"},{"name":"down-regulation of fumitremorgin B biosynthetic process","type":"exact"},{"name":"downregulation of fumitremorgin B biosynthetic process","type":"exact"}],"termid":"GO:1900856"}


id: GO:0070774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phytoceramide + H2O = a fatty acid + phytosphingosine.","definition_xrefs":["GOC:pde","PMID:11356846"],"gene_count":0,"genotype_count":0,"name":"obsolete phytoceramidase activity (obsolete GO:0070774)","termid":"GO:0070774"}


id: PBO:0011443
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kelley-Seegmiller syndrome","termid":"PBO:0011443"}


id: GO:1902147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cytokinesis checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to cell cycle checkpoint signaling","termid":"GO:1902145"},{"relation_name":"regulates","term_name":"response to cytokinesis checkpoint signaling","termid":"GO:0072399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cytokinesis checkpoint signaling","secondary_identifiers":["GO:1902149"],"synonyms":[{"name":"regulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in cytokinesis checkpoint","type":"exact"}],"termid":"GO:1902147"}


id: GO:0004059
data:
  {"annotated_genes":["SJAG_02296"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96708],"is_not":false,"summary":null,"term":"GO:0004059"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an aralkylamine = CoA + an N-acetylaralkylamine.","definition_xrefs":["EC:2.3.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"aralkylamine N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ARALKYLAMINE-N-ACETYLTRANSFERASE-RXN","Reactome:R-HSA-209792","RHEA:20497"],"synonyms":[{"name":"AANAT activity","type":"related"},{"name":"acetyl-CoA:2-arylethylamine N-acetyltransferase activity","type":"related"},{"name":"arylalkylamine N-acetyltransferase activity","type":"related"},{"name":"melatonin rhythm enzyme activity","type":"related"},{"name":"serotonin N-acetyltransferase activity","type":"narrow"},{"name":"serotonin acetylase activity","type":"narrow"},{"name":"serotonin acetyltransferase activity","type":"narrow"}],"termid":"GO:0004059","terms_by_termid":{"GO:0004059":null}}


id: PBO:0081157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFPM1 antisense RNA 1","termid":"PBO:0081157"}


id: PBO:0065922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB, member of RAS oncogene family like 2A","termid":"PBO:0065922"}


id: PBO:0063601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 13","termid":"PBO:0063601"}


id: GO:0006135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydropteridine reduction (obsolete GO:0006135)","synonyms":[{"name":"dihydropteridine reduction","type":"exact"}],"termid":"GO:0006135"}


id: GO:0007409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"De novo generation of a long process of a neuron, including the terminal branched region. Refers to the morphogenesis or creation of shape or form of the developing axon, which carries efferent (outgoing) action potentials from the cell body towards target cells.","definition_xrefs":["GOC:dph","ISBN:0198506732","GOC:pr","GOC:pg","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonogenesis","secondary_identifiers":["GO:0007410"],"synonyms":[{"name":"axon growth","type":"narrow"},{"name":"axon morphogenesis","type":"exact"},{"name":"neuron long process generation","type":"exact"}],"termid":"GO:0007409"}


id: GO:0070174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of enamel mineralization, the deposition of calcium salts in tooth enamel.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tooth mineralization","termid":"GO:0070171"},{"relation_name":"is_a","term_name":"regulation of enamel mineralization","termid":"GO:0070173"},{"relation_name":"negatively_regulates","term_name":"enamel mineralization","termid":"GO:0070166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of enamel mineralization","termid":"GO:0070174"}


id: PBO:0030396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleus:cytoplasm_ratio","termid":"PBO:0030396"}


id: PBO:0060325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin ID","termid":"PBO:0060325"}


id: GO:0062029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of stress-granule assembly, the aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.","definition_xrefs":["PMID:20180778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress granule assembly","termid":"GO:0062028"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"stress granule assembly","termid":"GO:0034063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of stress granule assembly","termid":"GO:0062029"}


id: PBO:0043228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiotrophin like cytokine factor 1","termid":"PBO:0043228"}


id: GO:0060352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a cell adhesion molecule due to biosynthesis or secretion.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell adhesion molecule production","termid":"GO:0060352"}


id: GO:0021919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the spatial identity of regions along the dorsal-ventral axis of the spinal cord.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","PMID:12593981","GO_REF:0000021"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in spinal cord dorsal/ventral patterning (obsolete GO:0021919)","synonyms":[{"name":"BMP signaling pathway in spinal cord dorsoventral patterning","type":"exact"},{"name":"BMP signaling pathway involved in spinal cord dorsal-ventral patterning","type":"exact"},{"name":"BMP signalling pathway involved in spinal cord dorsal-ventral patterning","type":"exact"},{"name":"bone morphogenetic protein signaling pathway in spinal cord dorsal-ventral patterning","type":"exact"},{"name":"bone morphogenetic protein signalling pathway involved in spinal cord dorsal-ventral patterning","type":"exact"}],"termid":"GO:0021919"}


id: FYPO:0004473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that enters the cell cycle but then undergoes cell cycle arrest with unreplicated DNA, and eventually dies.","definition_xrefs":["PomBase:mah","PMID:9356477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with unreplicated DNA","termid":"FYPO:0001430"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, cell cycle arrest","termid":"FYPO:0001924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, cell cycle arrest with unreplicated DNA","synonyms":[{"name":"inviable following spore germination, without cell division, cell cycle arrest with unreplicated DNA","type":"exact"},{"name":"inviable germinated spore, without cell division, cell cycle arrest with unreplicated DNA","type":"exact"},{"name":"lethal after spore germination, without cell division, cell cycle arrest with unreplicated DNA","type":"exact"}],"termid":"FYPO:0004473"}


id: PBO:0113116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein involved in endocytosis and autophagy; homologous to Chediak-Higashi syndrome and Beige proteins, both of which are implicated in disease syndromes in human and mouse, respectively, due to defective lysosomal trafficking; mutant phenotype and genetic interactions suggest a role in protein sorting","termid":"PBO:0113116"}


id: GO:0071575
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that penetrate only the external side of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of external side of plasma membrane (obsolete GO:0071575)","synonyms":[{"name":"integral to external leaflet of plasma membrane","type":"exact"},{"name":"integral to external side of plasma membrane","type":"narrow"}],"termid":"GO:0071575"}


id: PBO:0086648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus and nucleus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086648"}


id: GO:0098571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the plastid thylakoid membrane that faces the lumen, and any proteins embedded in it or loosely bound to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"plastid thylakoid membrane","termid":"GO:0055035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"lumenal side of plastid thylakoid membrane","termid":"GO:0098571"}


id: PBO:0055023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2438","termid":"PBO:0055023"}


id: GO:0042754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a circadian rhythm behavior.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian rhythm","synonyms":[{"name":"down regulation of circadian rhythm","type":"exact"},{"name":"down-regulation of circadian rhythm","type":"exact"},{"name":"downregulation of circadian rhythm","type":"exact"},{"name":"inhibition of circadian rhythm","type":"narrow"}],"termid":"GO:0042754"}


id: PBO:0003159
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.6","termid":"PBO:0003159"}


id: PBO:0087704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; affects transcription by acting as target of activators and repressors; forms part of the tail domain of mediator","termid":"PBO:0087704"}


id: PR:Q09900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3802 gene.","definition_xrefs":["UniProtKB:Q09900","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L38-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.12","synonyms":[{"name":"Spom972h-rpl3802","type":"exact"}],"termid":"PR:Q09900"}


id: RO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of enables","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enabled_by","termid":"RO:0002333"}


id: PBO:0060144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-methyltetrahydrofolate-homocysteine methyltransferase","termid":"PBO:0060144"}


id: GO:0034578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: limonene + H2O = alpha-terpineol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete limonene 8-hydratase activity (obsolete GO:0034578)","termid":"GO:0034578"}


id: PBO:0038711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 6","termid":"PBO:0038711"}


id: PATO:0000685
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000685 relative incidence value (obsolete PATO:0000685)","termid":"PATO:0000685"}


id: PBO:0002756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Rvb1","termid":"PBO:0002756"}


id: GO:0045744
data:
  {"annotated_genes":["SJAG_01245","SJAG_00266","SJAG_02426","SJAG_02481","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106072"},{"annotations":[104096,112554,88110,96522,88775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"down-regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"downregulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"inhibition of G-protein coupled receptor protein signaling pathway","type":"narrow"},{"name":"negative regulation of G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"negative regulation of G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"negative regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"negative regulation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"negative regulation of G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"negative regulation of GPCR protein signaling pathway","type":"exact"},{"name":"negative regulation of GPCR protein signalling pathway","type":"exact"}],"termid":"GO:0045744","terms_by_termid":{"GO:0106072":null,"GO:0110034":null}}


id: GO:0001982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The lowering of the number of nerve impulses from baroreceptors as a result of decreased stretch of an artery that results in an increased in sympathetic nerve impulses to peripheral blood vessels.","definition_xrefs":["ISBN:0721643949","ISBN:0323031951","GOC:mtg_cardio","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","termid":"GO:0001978"},{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}


id: FYPO:0003844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation does not occur over all or part of the chromosomes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0000337"],"is_obsolete":false,"name":"abolished mitotic chromosome condensation","synonyms":[{"name":"abolished chromosome condensation during mitotic cell cycle","type":"related"},{"name":"abolished mitotic chromosome condensation during vegetative growth","type":"exact"},{"name":"mitotic chromosome condensation abolished","type":"exact"}],"termid":"FYPO:0003844"}


id: PBO:0060524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl-tRNA synthetase 1 pseudogene 2","termid":"PBO:0060524"}


id: PBO:0047629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"firre intergenic repeating RNA element","termid":"PBO:0047629"}


id: PBO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc2","termid":"PBO:0001459"}


id: PBO:0088920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in vesicle-mediated transport","termid":"PBO:0088920"}


id: PBO:0043763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX11 pseudogene 1","termid":"PBO:0043763"}


id: PBO:0066822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 121","termid":"PBO:0066822"}


id: PBO:0077050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRB antisense RNA 1","termid":"PBO:0077050"}


id: PATO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being oblong, with the lower end very much attenuated.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oblong","termid":"PATO:0000946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatulate","synonyms":[{"name":"spathulate","type":"exact"}],"termid":"PATO:0001937"}


id: GO:0015382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + Na+(out) = sulfate(in) + Na+(in).","definition_xrefs":["TC:2.A.47.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sodium:sulfate symporter activity","secondary_identifiers":["Reactome:R-HSA-433099","Reactome:R-HSA-433114"],"synonyms":[{"name":"sodium:sulfate cotransporter activity","type":"broad"},{"name":"sodium:sulphate symporter activity","type":"exact"}],"termid":"GO:0015382"}


id: PBO:0073234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 7","termid":"PBO:0073234"}


id: GO:0045876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sister chromatid cohesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid cohesion","termid":"GO:0007063"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sister chromatid cohesion","synonyms":[{"name":"activation of sister chromatid cohesion","type":"narrow"},{"name":"stimulation of sister chromatid cohesion","type":"narrow"},{"name":"up regulation of sister chromatid cohesion","type":"exact"},{"name":"up-regulation of sister chromatid cohesion","type":"exact"},{"name":"upregulation of sister chromatid cohesion","type":"exact"}],"termid":"GO:0045876"}


id: PBO:0078175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-6","termid":"PBO:0078175"}


id: GO:0047567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyloxindole + NADP+ = 3-methyleneoxindole + H+ + NADPH.","definition_xrefs":["RHEA:20257","EC:1.3.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-methyleneoxindole reductase activity","secondary_identifiers":["MetaCyc:3-METHYLENEOXINDOLE-REDUCTASE-RXN","KEGG_REACTION:R03930"],"synonyms":[{"name":"3-methyl-1,3-dihydroindol-2-one:NADP+ oxidoreductase activity","type":"related"},{"name":"3-methyloxindole:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047567"}


id: PBO:0058108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4323","termid":"PBO:0058108"}


id: PR:Q09755
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24H6.10c gene.","definition_xrefs":["UniProtKB:Q09755","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.10c","synonyms":[{"name":"3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAHP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC24H6.10c","type":"exact"},{"name":"phospho-2-keto-3-deoxyheptonate aldolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09755"}


id: GO:0009936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A group of proteins located within the cell walls of plants, both dicots and grasses, that play an essential role in loosening cell walls during cell growth. They are hydrophobic, non glycosylated proteins of about 30kDa.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete expansin (obsolete GO:0009936)","synonyms":[{"name":"expansin","type":"exact"}],"termid":"GO:0009936"}


id: PBO:0054919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2333","termid":"PBO:0054919"}


id: PBO:0047046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member A","termid":"PBO:0047046"}


id: PBO:0049058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 63","termid":"PBO:0049058"}


id: GO:0035798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n-alkanal + NADP+ = alk-2-enal + NADPH + H+.","definition_xrefs":["PMID:16299173","RHEA:13737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-alkenal reductase [NAD(P)+] activity","termid":"GO:0032440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-alkenal reductase (NADPH) activity","secondary_identifiers":["EC:1.3.1.102"],"synonyms":[{"name":"NADPH:2-alkenal alpha,beta-hydrogenase activity","type":"exact"}],"termid":"GO:0035798"}


id: PBO:0082739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; essential for mitotic growth; RSC6 has a paralog, SNF12, that arose from the whole genome duplication","termid":"PBO:0082739"}


id: PBO:0042484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 9","termid":"PBO:0042484"}


id: SO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 2KB 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upstream_gene_variant","termid":"SO:0001631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2KB_upstream_variant","synonyms":[{"name":"2KB upstream variant","type":"exact"},{"name":"near-gene-5","type":"exact"}],"termid":"SO:0001636"}


id: GO:0016986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Plays a role in regulating transcription initiation.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription initiation factor activity (obsolete GO:0016986)","synonyms":[{"name":"transcription initiation factor activity","type":"exact"},{"name":"transcriptional initiation factor activity","type":"exact"}],"termid":"GO:0016986"}


id: MOD:01982
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["ChEBI:17750","RESID:AA0619","PubMed:23978223","PubMed:23818633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethylglycine","synonyms":[{"name":"(trimethylammonio)ethanoic acid","type":"exact"},{"name":"1-carboxy-N,N,N-trimethylmethanazanium","type":"exact"},{"name":"2-trimethylammonioacetate","type":"exact"},{"name":"MOD_RES N,N,N-trimethylglycine","type":"exact"},{"name":"N,N,N-trimethylglycine cation","type":"exact"},{"name":"N,N,N-trimethylglycinium","type":"exact"},{"name":"N2Me3+Gly","type":"exact"},{"name":"betaine","type":"exact"},{"name":"carboxy-N,N,N-trimethylmethanaminium","type":"exact"},{"name":"carboxymethyl-trimethylazanium","type":"exact"},{"name":"glycine betaine","type":"exact"}],"termid":"MOD:01982"}


id: PBO:0074080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 4","termid":"PBO:0074080"}


id: FYPO:0004103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, and shaped in the form of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"viable spheroid vegetative cell","termid":"FYPO:0002380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"viable spherical vegetative cell","synonyms":[{"name":"spherical viable cell","type":"exact"},{"name":"viable spherical cell","type":"exact"},{"name":"viable spherical cell during vegetative growth","type":"exact"},{"name":"viable spherical vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004103"}


id: GO:0039722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a toll-like receptor signaling pathway in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:15944308","PMID:18327267","PMID:17299722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host toll-like receptor signaling pathway","synonyms":[{"name":"inhibition of host TLR pathway by virus","type":"narrow"},{"name":"suppression by virus of host TLR signaling pathway","type":"narrow"},{"name":"suppression by virus of host toll-like receptor signaling pathway","type":"narrow"}],"termid":"GO:0039722"}


id: GO:0071683
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite that is found on a sensory neuron, and directly transduces a sensory signal from the sensory neuron to another neuron.","definition_xrefs":["GOC:dos","GOC:kmv","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sensory dendrite","termid":"GO:0071683"}


id: PBO:0031031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_organization","termid":"PBO:0031031"}


id: MOD:00453
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a quaternary amine reagent light form group.","definition_xrefs":["PubMed:11857757","Unimod:60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent light form (N-term & K)","synonyms":[{"name":"GIST-Quat","type":"related"},{"name":"Quaternary amine labeling reagent light form (N-term & K)","type":"related"}],"termid":"MOD:00453"}


id: PBO:0080600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 35","termid":"PBO:0080600"}


id: PBO:0045637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 49 (pseudogene)","termid":"PBO:0045637"}


id: PBO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mdm10 (predicted)","termid":"PBO:0001300"}


id: PBO:0057052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 138-1","termid":"PBO:0057052"}


id: PR:Q9Y7V0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug117 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7V0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 117 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.11c","synonyms":[{"name":"Spom972h-mug117","type":"exact"}],"termid":"PR:Q9Y7V0"}


id: GO:0022011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system axon ensheathment","termid":"GO:0032292"},{"relation_name":"is_a","term_name":"myelination","termid":"GO:0042552"},{"relation_name":"part_of","term_name":"Schwann cell development","termid":"GO:0014044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination in peripheral nervous system","synonyms":[{"name":"peripheral nervous system myelination","type":"exact"}],"termid":"GO:0022011"}


id: GO:0016826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid sulfur-nitrogen bond.","definition_xrefs":["EC:3.10.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on acid sulfur-nitrogen bonds","synonyms":[{"name":"hydrolase activity, acting on acid sulphur-nitrogen bonds","type":"exact"}],"termid":"GO:0016826"}


id: PBO:0013077
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisB","termid":"PBO:0013077"}


id: PBO:0079791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A12, pseudogene","termid":"PBO:0079791"}


id: PBO:0029425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_palmitoylation","termid":"PBO:0029425"}


id: GO:0015438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + teichoic acid(in) = ADP + phosphate + teichoic acid(out).","definition_xrefs":["PMID:7565096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type teichoic acid transporter activity","secondary_identifiers":["GO:0015162","EC:7.5.2.4","MetaCyc:3.6.3.40-RXN"],"synonyms":[{"name":"ABC-type teichoic-acid transporter","type":"exact"},{"name":"ATP-dependent teichoic acid transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled teichoic acid transmembrane transporter activity","type":"related"},{"name":"teichoic acid transmembrane transporter activity","type":"broad"},{"name":"teichoic-acid ABC transporter","type":"exact"},{"name":"teichoic-acid-transporting ATPase activity","type":"related"}],"termid":"GO:0015438"}


id: PBO:0007714
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible frameshifted","termid":"PBO:0007714"}


id: GO:0019211
data:
  {"annotated_genes":["SJAG_00526","SJAG_01142","SJAG_00369","SJAG_03793","SJAG_04968","SJAG_00883","SJAG_03681","SJAG_01270","SJAG_04638","SJAG_00095","SJAG_00078"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103362,114748],"is_not":false,"summary":null,"term":"GO:0019211"},{"annotations":[93768,112071,114127,88957,102694,111137,113221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072542"},{"annotations":[85996,93931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"phosphatase regulator activity","termid":"GO:0019208"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01142":null,"SJAG_01270":null,"SJAG_03681":null,"SJAG_03793":null,"SJAG_04638":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"phosphatase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019211","terms_by_termid":{"GO:0008160":null,"GO:0019211":null,"GO:0072542":null}}


id: GO:0036446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an undifferentiated cell acquires the features of a myofibroblast cell.","definition_xrefs":["GOC:nhn","CL:0000186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast differentiation","synonyms":[{"name":"myofibroblast cell differentiation","type":"exact"}],"termid":"GO:0036446"}


id: PR:Q9P6M5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC652.01 gene.","definition_xrefs":["UniProtKB:Q9P6M5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C652.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC652.01","synonyms":[{"name":"Spom972h-SPAC652.01","type":"exact"}],"termid":"PR:Q9P6M5"}


id: PBO:0063856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P38 inhibited cutaneous squamous cell carcinoma associated lincRNA","termid":"PBO:0063856"}


id: GO:1901629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of presynaptic membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"presynaptic membrane organization","termid":"GO:0097090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of presynaptic membrane organization","synonyms":[{"name":"regulation of pre-synaptic membrane organization","type":"exact"},{"name":"regulation of presynaptic membrane organisation","type":"exact"}],"termid":"GO:1901629"}


id: GO:0051940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of catecholamine neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"regulates","term_name":"catecholamine uptake involved in synaptic transmission","termid":"GO:0051934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"regulation of catecholamine neurotransmitter reuptake","type":"exact"},{"name":"regulation of catecholamine neurotransmitter uptake","type":"exact"},{"name":"regulation of catecholamine uptake during transmission of nerve impulse","type":"broad"}],"termid":"GO:0051940"}


id: PBO:0031450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pre-replicative_complex_assembly","termid":"PBO:0031450"}


id: PBO:0061000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHP2 ribonucleoprotein","termid":"PBO:0061000"}


id: PBO:0091106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex platform subcomplex scaffold subunit Apc1","termid":"PBO:0091106"}


id: FYPO:0005336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular histone level","termid":"FYPO:0004981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal level of histone H3 in cell","synonyms":[{"name":"normal accumulation of histone H3 in cell","type":"related"},{"name":"normal cellular histone H3 level","type":"exact"},{"name":"normal histone H3 level during vegetative growth","type":"exact"},{"name":"normal level of histone H3 in cell during mitotic cell cycle","type":"related"},{"name":"normal level of histone H3 in cell during vegetative growth","type":"exact"}],"termid":"FYPO:0005336"}


id: GO:0098505
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91136],"is_not":false,"summary":null,"term":"GO:0098505"}]},"cv_name":"molecular_function","definition":"Binding to G-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["PMID:11349150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"G-rich strand telomeric DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098505","terms_by_termid":{"GO:0098505":null}}


id: PBO:0040545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-glucuronyltransferase 3","termid":"PBO:0040545"}


id: GO:0050740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine.","definition_xrefs":["RESID:AA0349"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine (obsolete GO:0050740)","termid":"GO:0050740"}


id: PBO:0053416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 354","termid":"PBO:0053416"}


id: PBO:0046448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymal peptidase inhibitor","termid":"PBO:0046448"}


id: PBO:0113357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for sporulation; induced during meiosis and sporulation; gene is a member of Centroid, a centromere-linked gene family; not an essential gene; YNL034W has a paralog, YNL018C, that arose from a segmental duplication","termid":"PBO:0113357"}


id: GO:0090557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of a barrier between endothelial cell layers of the intestine to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.","definition_xrefs":["GOC:krc","PMID:22155109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of endothelial intestinal barrier","termid":"GO:0090557"}


id: PBO:0071845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 40","termid":"PBO:0071845"}


id: SO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Morpholino oligos are synthesized from four different Morpholino subunits, each of which contains one of the four genetic bases (A, C, G, T) linked to a 6-membered morpholine ring. Eighteen to 25 subunits of these four subunit types are joined in a specific order by non-ionic phosphorodiamidate intersubunit linkages to give a Morpholino.","direct_ancestors":[{"relation_name":"has_quality","term_name":"morpholino_backbone","termid":"SO:0001183"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morpholino_oligo","synonyms":[{"name":"morphant","type":"broad"},{"name":"morpholino","type":"exact"},{"name":"morpholino oligo","type":"exact"}],"termid":"SO:0000034"}


id: PBO:0045638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 50 (pseudogene)","termid":"PBO:0045638"}


id: PBO:0066252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein X-linked 2","termid":"PBO:0066252"}


id: PBO:0058717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6845","termid":"PBO:0058717"}


id: PBO:0044694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-dopachrome tautomerase like","termid":"PBO:0044694"}


id: PBO:0063286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 12","termid":"PBO:0063286"}


id: GO:0035517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric protein complex that removes monoubiquitin from histone H2A. In Drosophila and mammals, the core of the complex is composed of Calypso/BAP1 and Asx/ASXL1, respectively.","definition_xrefs":["PMID:20436459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PcG protein complex","termid":"GO:0031519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"PR-DUB complex","synonyms":[{"name":"Polycomb repressive deubiquitinase complex","type":"exact"}],"termid":"GO:0035517"}


id: PBO:0014256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex (RQC) complex subunit Rqc1 (predicted)","termid":"PBO:0014256"}


id: GO:1900590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of violaceol I.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"violaceol I metabolic process","termid":"GO:1900588"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"violaceol I biosynthetic process","synonyms":[{"name":"violaceol I anabolism","type":"exact"},{"name":"violaceol I biosynthesis","type":"exact"},{"name":"violaceol I formation","type":"exact"},{"name":"violaceol I synthesis","type":"exact"}],"termid":"GO:1900590"}


id: PBO:0036307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb2","termid":"PBO:0036307"}


id: PBO:0062878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthodenticle homeobox 2","termid":"PBO:0062878"}


id: PBO:0068542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 148, pseudogene","termid":"PBO:0068542"}


id: PBO:0041896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caveolae associated protein 2","termid":"PBO:0041896"}


id: PBO:0069445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 710, pseudogene","termid":"PBO:0069445"}


id: PBO:0074174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 1","termid":"PBO:0074174"}


id: PBO:0048614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 6","termid":"PBO:0048614"}


id: GO:0000389
data:
  {"annotated_genes":["SJAG_00225","SJAG_01214"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97332,104997],"is_not":false,"summary":null,"term":"GO:0000389"}]},"cv_name":"biological_process","definition":"Recognition of the intron 3'-splice site by components of the assembling U2- or U12-type spliceosome.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splice site recognition","termid":"GO:0006376"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00225":null,"SJAG_01214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0016071","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"mRNA 3'-splice site recognition","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000383","GO:0000382"],"synonyms":[{"name":"U12-type nuclear mRNA 3'-splice site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA 3'-splice site recognition","type":"narrow"},{"name":"nuclear mRNA 3'-splice site recognition","type":"exact"}],"termid":"GO:0000389","terms_by_termid":{"GO:0000389":null}}


id: PBO:0066291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member S, pseudogene","termid":"PBO:0066291"}


id: FYPO:0000392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the metaphase/anaphase transition under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell cycle arrest at mitotic metaphase/anaphase transition (obsolete FYPO:0000392)","synonyms":[{"name":"abnormal cell cycle arrest at metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition with condensed chromosomes","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at metaphase/anaphase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase arrest","type":"exact"},{"name":"cell cycle passage through the metaphase-anaphase transition: arrested","type":"related"}],"termid":"FYPO:0000392"}


id: GO:0071010
data:
  {"annotated_genes":["SJAG_03547","SJAG_00249","SJAG_03995","SJAG_01301","SJAG_01870","SJAG_00859","SJAG_00147","SJAG_02304","SJAG_00809","SJAG_03469","SJAG_00498","SJAG_02185","SJAG_00911","SJAG_00577","SJAG_00322","SJAG_01654","SJAG_02844","SJAG_04911","SJAG_02558","SJAG_05240","SJAG_02279","SJAG_01008","SJAG_03210","SJAG_05009","SJAG_04214","SJAG_00504","SJAG_00058","SJAG_03983","SJAG_00225","SJAG_04163","SJAG_00474","SJAG_04318"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104893,106794,93903,106783,108802,105633,112576,99309,106191,102877,91655,90965,108516,84552,103063,87586,97824,91384,89407,114892,101988,110009,101634,97330,91225,109432,106765,92393,98643,89076,102518,111408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by association of the 5' splice site and the branch point sequence with specific snRNPs. The prespliceosome includes many proteins in addition to those found in the bound snRNPs. Commitment to a given pair of 5' and 3' splice sites occurs at the time of prespliceosome formation. Prespliceosome complexes are not active for splicing, but are instead an early step in the assembly of a spliceosomal complex.","definition_xrefs":["PMID:19239890","GOC:ab","GOC:mah","GOC:krc","PMID:17332742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01301":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02558":null,"SJAG_02844":null,"SJAG_03210":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"prespliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mammalian spliceosomal complex A","type":"narrow"},{"name":"prespliceosomal complex","type":"exact"},{"name":"yeast spliceosomal complex B","type":"narrow"}],"termid":"GO:0071010","terms_by_termid":{"GO:0071004":null}}


id: PATO:0001571
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's being made wider or larger in all dimensions.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilated","termid":"PATO:0001571"}


id: PBO:0031177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe,_small_cell","termid":"PBO:0031177"}


id: GO:0110165
data:
  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