# terms

id: FYPO:0002814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is abnormal. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to cell surface","synonyms":[{"name":"abnormal protein localisation to cell surface","type":"exact"},{"name":"abnormal protein localization to cell surface during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell surface during vegetative growth","type":"exact"}],"termid":"FYPO:0002814"}


id: PBO:0067294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 379, pseudogene","termid":"PBO:0067294"}


id: FYPO:0006914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing terconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on terconazole","synonyms":[{"name":"normal cell population growth in presence of terconazole","type":"exact"},{"name":"normal cell population growth on terconazole","type":"exact"},{"name":"normal cellular response to terconazole","type":"related"},{"name":"normal vegetative cell population growth on terconazole","type":"exact"}],"termid":"FYPO:0006914"}


id: PBO:0081730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 660","termid":"PBO:0081730"}


id: GO:0043669
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer part of the exine, which stains positively with basic fuchsin in optical microscopy and has higher electron density in conventionally prepared TEM sections.","definition_xrefs":["PMID:28904424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ectexine","termid":"GO:0043669"}


id: FYPO:0005889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium chloride. Cells stop growing (and may die) at a concentration of sodium chloride that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to sodium chloride","synonyms":[{"name":"hypersensitive to sodium chloride","type":"exact"},{"name":"sensitive to NaCl","type":"exact"},{"name":"sensitive to sodium chloride during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium chloride during vegetative growth","type":"exact"}],"termid":"FYPO:0005889"}


id: PBO:0017989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase Srm1 (predicted)","termid":"PBO:0017989"}


id: PBO:0002774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vigtamin H transporter (predicted)","termid":"PBO:0002774"}


id: RO:0002610
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two entities, where the entities exhibit a statistical dependence relationship. The entities may be statistical variables, or they may be other kinds of entities such as diseases, chemical entities or processes.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_dependence_to","termid":"RO:0002609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"correlated_with","termid":"RO:0002610"}


id: GO:0034889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: endosulfan hemisulfate + H2O = endosulfan monoalcohol + 2 H+ + sulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endosulfan hemisulfate sulfatase activity (obsolete GO:0034889)","termid":"GO:0034889"}


id: PR:O74520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp663 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C663.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.14c","synonyms":[{"name":"Spom972h-trp663","type":"exact"}],"termid":"PR:O74520"}


id: PBO:0090451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribose diphosphatase, NudF subfamily Ysa1","termid":"PBO:0090451"}


id: GO:0035967
data:
  {"annotated_genes":["SJAG_04471","SJAG_00270","SJAG_03841","SJAG_02419","SJAG_00552","SJAG_00681","SJAG_03482","SJAG_00790","SJAG_00403","SJAG_03611","SJAG_00226","SJAG_02341","SJAG_04567","SJAG_03345","SJAG_01768","SJAG_01737","SJAG_00173","SJAG_04103","SJAG_04187","SJAG_04435","SJAG_02601","SJAG_04612","SJAG_01516","SJAG_04283","SJAG_01160","SJAG_04118","SJAG_04262","SJAG_00564","SJAG_05022","SJAG_03815","SJAG_01858","SJAG_00219","SJAG_00530","SJAG_03657","SJAG_00054","SJAG_01556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106139,108439,106138,84109,100324,101325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[106140,106141,99031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034620"},{"annotations":[105878,106468,105774,109778,104131],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[90537,89582,112955,103300,109966,94789,113402,85697,113559,97321,88977,112196,110367,110233,105696],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030968"},{"annotations":[83832,99515,109140,85293],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[85549,89123],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036498"},{"annotations":[84366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034514"},{"annotations":[106995,86448],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein that is not folded in its correct three-dimensional structure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"response to topologically incorrect protein","termid":"GO:0035966"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00173":null,"SJAG_00219":null,"SJAG_00226":null,"SJAG_00270":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00552":null,"SJAG_00564":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_01160":null,"SJAG_01516":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_01768":null,"SJAG_01858":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02601":null,"SJAG_03345":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03657":null,"SJAG_03815":null,"SJAG_03841":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04187":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04471":null,"SJAG_04567":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to topologically incorrect protein","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to misfolded or unfolded protein","type":"related"}],"termid":"GO:0035967","terms_by_termid":{"GO:0030968":null,"GO:0034514":null,"GO:0034620":null,"GO:0036498":null,"GO:0071218":null,"GO:0071629":null,"GO:0071630":null,"GO:0180027":null}}


id: PBO:0079647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 S","termid":"PBO:0079647"}


id: PBO:0113539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein; involved in oxidative stress response and modulation of replicative lifespan; targeted to vacuole via AP-3 pathway; undergoes autophosphorylation, which is abolished by mutation of Asp781 in catalytic motif (D781N); P5 ATPase subfamily member with similarity to yeast Spf1p and homology to human ATP13A2 (PARK9), mutations in which are associated with Parkinson disease and Kufor-Rakeb syndrome","termid":"PBO:0113539"}


id: GO:0033868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + Goodpasture antigen-binding protein = ADP + Goodpasture antigen-binding phosphoprotein.","definition_xrefs":["EC:2.7.11.9"],"gene_count":0,"genotype_count":0,"name":"obsolete Goodpasture-antigen-binding protein kinase activity (obsolete GO:0033868)","secondary_identifiers":["MetaCyc:2.7.11.9-RXN"],"synonyms":[{"name":"ATP:Goodpasture antigen-binding protein phosphotransferase activity","type":"related"},{"name":"GPBP kinase activity","type":"related"},{"name":"GPBPK","type":"related"},{"name":"Goodpasture antigen-binding protein kinase activity","type":"related"},{"name":"STK11","type":"related"}],"termid":"GO:0033868"}


id: PBO:0047055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 117 member A","termid":"PBO:0047055"}


id: GO:2000516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell activation","termid":"GO:0046635"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000514"},{"relation_name":"positively_regulates","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"}


id: GO:1901220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber morphogenesis.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber morphogenesis","termid":"GO:1901219"},{"relation_name":"negatively_regulates","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac chamber morphogenesis","synonyms":[{"name":"down regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"down regulation of heart chamber morphogenesis","type":"exact"},{"name":"down-regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"down-regulation of heart chamber morphogenesis","type":"exact"},{"name":"downregulation of cardiac chamber morphogenesis","type":"exact"},{"name":"downregulation of heart chamber morphogenesis","type":"exact"},{"name":"inhibition of cardiac chamber morphogenesis","type":"narrow"},{"name":"inhibition of heart chamber morphogenesis","type":"narrow"},{"name":"negative regulation of heart chamber morphogenesis","type":"exact"}],"termid":"GO:1901220"}


id: GO:0043895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of part of a 1,4-alpha-D-glucan chain by formation of a 1,4-alpha-D-glucosidic bond.","definition_xrefs":["EC:2.4.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cyclomaltodextrin glucanotransferase activity","secondary_identifiers":["MetaCyc:2.4.1.19-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan 4-alpha-D-(1,4-alpha-D-glucano)-transferase (cyclizing)","type":"exact"},{"name":"BMA","type":"related"},{"name":"Bacillus macerans amylase","type":"related"},{"name":"CGTase","type":"related"},{"name":"alpha-1,4-glucan 4-glycosyltransferase, cyclizing","type":"related"},{"name":"alpha-cyclodextrin glucanotransferase","type":"related"},{"name":"alpha-cyclodextrin glycosyltransferase","type":"related"},{"name":"beta-cyclodextrin glucanotransferase","type":"related"},{"name":"beta-cyclodextrin glycosyltransferase","type":"related"},{"name":"cyclodextrin glucanotransferase","type":"broad"},{"name":"cyclodextrin glycosyltransferase","type":"related"},{"name":"cyclomaltodextrin glucotransferase","type":"related"},{"name":"cyclomaltodextrin glycosyltransferase","type":"related"},{"name":"gamma-cyclodextrin glycosyltransferase","type":"related"},{"name":"konchizaimu","type":"related"},{"name":"neutral-cyclodextrin glycosyltransferase","type":"related"}],"termid":"GO:0043895"}


id: GO:0016521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of pituitary adenylate cyclase activating polypeptide, a peptide produced in the hypothalamus that binds to receptors to exert pleiotropic effects including control of neurotransmitter release, vasodilation, bronchodilation, activation of intestinal motility, increase in insulin and histamine secretion, immune modulation, and stimulation of cell proliferation and differentiation.","definition_xrefs":["GOC:mah","PMID:19805477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0005515","GO:0003674","GO:0140677","GO:0005488"],"is_obsolete":false,"name":"pituitary adenylate cyclase activating polypeptide activity","synonyms":[{"name":"pituitary adenylyl cyclase activating polypeptide activity","type":"exact"}],"termid":"GO:0016521"}


id: GO:0160052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The mitotic cell cycle process in which the nuclear envelope, including nuclear pores, is equally distributed to the two daughter cells during the mitotic cell cycle.","definition_xrefs":["PMID:24184107","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic nuclear envelope segregation","references_by_uniquename":{"PMID:24184107":null},"termid":"GO:0160052"}


id: GO:0031831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5B serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 5B serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 5B receptor binding","type":"exact"},{"name":"type 5B serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031831"}


id: PBO:0066625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC8 guanine nucleotide exchange factor B","termid":"PBO:0066625"}


id: GO:0010408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the cell wall arabinogalactan II glycoprotein variant which contains both an arabinogalactan protein (AGP) motif and a fasciclin domain.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinogalactan protein metabolic process","termid":"GO:0010405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"fasciclin-like arabinogalactan protein metabolic process","synonyms":[{"name":"fasciclin-like arabinogalactan protein metabolism","type":"exact"}],"termid":"GO:0010408"}


id: PBO:0072909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAN domain containing 2 pseudogene","termid":"PBO:0072909"}


id: GO:0075272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of zygosporangium development","termid":"GO:0075272"}


id: PBO:0046070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 1","termid":"PBO:0046070"}


id: PBO:0039496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A19, pseudogene","termid":"PBO:0039496"}


id: PBO:0058556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6165","termid":"PBO:0058556"}


id: GO:0050672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell proliferation","termid":"GO:0032945"},{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte activation","termid":"GO:0051250"},{"relation_name":"negatively_regulates","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte proliferation","synonyms":[{"name":"down regulation of lymphocyte proliferation","type":"exact"},{"name":"down-regulation of lymphocyte proliferation","type":"exact"},{"name":"downregulation of lymphocyte proliferation","type":"exact"},{"name":"inhibition of lymphocyte proliferation","type":"narrow"}],"termid":"GO:0050672"}


id: PBO:0039252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 3 family member A2","termid":"PBO:0039252"}


id: GO:0180027
data:
  {"annotated_genes":["SJAG_05022","SJAG_03657","SJAG_03345","SJAG_04612"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83832,85293,99515,109140],"is_not":false,"summary":null,"term":"GO:0180027"}]},"cv_name":"biological_process","definition":"A protein quality control pathway that removes ubiquitinated proteins from the nuclear inner membrane before transferring them to the proteasome for degradation.","definition_xrefs":["PMID:37694715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein quality control by the ubiquitin-proteasome system","termid":"GO:0071630"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_03657":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"inner nuclear membrane-associated protein degradation pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"INMAD pathway","type":"exact"}],"termid":"GO:0180027","terms_by_termid":{"GO:0180027":null}}


id: GO:0034248
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314","SJAG_00792","SJAG_01402","SJAG_01187","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"},{"annotations":[111642,107515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[85725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[95109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"},{"annotations":[74893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_00792":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_02380":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of amide metabolism","type":"exact"},{"name":"regulation of cellular amide metabolic process","type":"exact"}],"termid":"GO:0034248","terms_by_termid":{"GO:0010510":null,"GO:0043456":null,"GO:1905569":null,"GO:1905857":null,"GO:2001211":null}}


id: PBO:0055359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2788","termid":"PBO:0055359"}


id: PBO:0077380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 121","termid":"PBO:0077380"}


id: PBO:0027622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_linear_element_morphology","termid":"PBO:0027622"}


id: GO:0044294
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The migrating motile tip of a growing nerve cell dendrite.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth cone","termid":"GO:0030426"},{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic growth cone","secondary_identifiers":["NIF_Subcellular:sao1594955670"],"synonyms":[{"name":"dendrite growth cone","type":"exact"}],"termid":"GO:0044294"}


id: GO:0098989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by glutamate binding to an NMDA-selective glutamate receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["ISBN:9780071120005","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor signaling pathway","termid":"GO:0035235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"NMDA selective glutamate receptor signaling pathway","termid":"GO:0098989"}


id: GO:0031963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with cortisol and transmitting the signal within the cell to trigger a change in cell activity or function.","definition_xrefs":["GOC:mah","PMID:12511169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear glucocorticoid receptor activity","termid":"GO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0003700","GO:0140110","GO:0038023"],"is_obsolete":false,"name":"nuclear cortisol receptor activity","synonyms":[{"name":"cortisol receptor activity","type":"broad"}],"termid":"GO:0031963"}


id: FYPO:0004151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of pyridoxine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular pyridoxine level","synonyms":[{"name":"decreased cellular pyridoxine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular pyridoxine level during vegetative growth","type":"exact"},{"name":"decreased pyridoxine accumulation","type":"related"},{"name":"reduced cellular pyridoxine level","type":"exact"}],"termid":"FYPO:0004151"}


id: GO:0097723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled movement of an amoeboid sperm cell.","definition_xrefs":["GOC:cilia","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm motility","termid":"GO:0097722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amoeboid sperm motility","synonyms":[{"name":"ameboid sperm motility","type":"exact"},{"name":"ameboid sperm movement","type":"exact"},{"name":"amoeboid sperm movement","type":"exact"}],"termid":"GO:0097723"}


id: MOD:01795
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 1x(13)C,3x(2)H C(6)-labeled L-methionine.","definition_xrefs":["PubMed:18688235","PubMed:15782174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"1x(13)C,3x(2)H labeled monomethylated residue","termid":"MOD:01794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(13)C,3x(2)H C(6)-labeled L-methionine","synonyms":[{"name":"Methyl:2H(3)13C(1)","type":"related"}],"termid":"MOD:01795"}


id: GO:0071738
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgD immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:11282392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgD immunoglobulin complex","termid":"GO:0071738"}


id: GO:1905700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xenobiotic transmembrane export. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GO_REF:0000058","GOC:krc","PMID:15198509","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1905699"},{"relation_name":"is_a","term_name":"negative regulation of response to drug","termid":"GO:2001024"},{"relation_name":"negatively_regulates","term_name":"xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1990961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","synonyms":[{"name":"down regulation of drug transmembrane export","type":"narrow"},{"name":"down-regulation of drug transmembrane export","type":"narrow"},{"name":"downregulation of drug transmembrane export","type":"narrow"},{"name":"inhibition of drug transmembrane export","type":"narrow"},{"name":"negative regulation of drug transmembrane export","type":"narrow"},{"name":"negative regulation of xenobiotic transmembrane export","type":"narrow"}],"termid":"GO:1905700"}


id: GO:1990816
data:
  {"annotated_genes":["SJAG_05184","SJAG_02578"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86247,90357],"is_not":false,"summary":null,"term":"GO:1990816"}]},"cv_name":"cellular_component","definition":"A zone of apposition between the vacuolar membrane and the mitochondrial outer membrane, important for transfer of lipids between the two organelles.","definition_xrefs":["PMID:25026035","PMID:25026036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02578":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vacuole-mitochondrion membrane contact site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vCLAMP","type":"exact"},{"name":"vacuole and mitochondria patch","type":"exact"}],"termid":"GO:1990816","terms_by_termid":{"GO:1990816":null}}


id: PBO:0017446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pathogen_of","termid":"PBO:0017446"}


id: PBO:0040858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridge-like lipid transfer protein family member 3B","termid":"PBO:0040858"}


id: PBO:0065146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protamine 2","termid":"PBO:0065146"}


id: PBO:0086144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for normal metabolism of the rRNA primary transcript; nucleolar protein; proposed to be involved in ribosome biogenesis","termid":"PBO:0086144"}


id: MOD:00434
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a hexose sugar group through a glycosidic bond.","definition_xrefs":["Unimod:41","DeltaMass:203","PubMed:15279557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"hexosylated residue","synonyms":[{"name":"Hex","type":"exact"},{"name":"Hexose","type":"related"},{"name":"Hexoses (Fru, Gal, Glc, Man)","type":"exact"},{"name":"O-Glycosyl-","type":"exact"}],"termid":"MOD:00434"}


id: PBO:0087241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine protease and general molecular chaperone; cleaves Roq1p, which modifies the substrate specificity of the Ubr1p Ub-ligase, promoting the stress-induced homeostatically-regulated protein degradation (SHRED) of misfolded and native ER-membrane and cytosolic proteins; chaperone activity involved in the heat stress response; promotes apoptosis through proteolysis of Bir1p; role in lipid homeostasis; mammalian Omi/HtrA2 serine protease family member","termid":"PBO:0087241"}


id: PBO:0044802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 103A","termid":"PBO:0044802"}


id: GO:0036370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding a D-alanine and presenting it for processing or offloading to a cognate enzyme. Covalently binds the D-alanine via a phosphopantetheine prosthetic group and mediates protein-protein interactions with the enzyme conferring specificity. The carrier protein provides an essential link between the D-alanine-D-alanyl carrier protein ligase and the incorporation of D-alanine into lipoteichoic acid by transferring activated D-alanine to cell membrane phosphatidylglycerol (PG).","definition_xrefs":["PMID:8682792","PMID:22750871","GOC:crds","PMID:11222605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphopantetheine-dependent carrier activity","termid":"GO:0140414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"D-alanyl carrier activity","synonyms":[{"name":"D-alanyl carrier protein","type":"related"}],"termid":"GO:0036370"}


id: PBO:0005594
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT Organizer","termid":"PBO:0005594"}


id: GO:1902390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of N-terminal peptidyl-serine acetylation.","definition_xrefs":["PMID:23912279","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of N-terminal peptidyl-serine acetylation (obsolete GO:1902390)","termid":"GO:1902390"}


id: PBO:0071463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 4","termid":"PBO:0071463"}


id: PBO:0005662
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Thi1","termid":"PBO:0005662"}


id: PBO:0079409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 3","termid":"PBO:0079409"}


id: GO:0140545
data:
  {"annotated_genes":["SJAG_03345","SJAG_04187"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85302,100329],"is_not":false,"summary":null,"term":"GO:0140545"}]},"cv_name":"molecular_function","definition":"An ATP-dependent molecular chaperone activity that mediates the solubilization of ordered protein aggregates.","definition_xrefs":["PMID:26312418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"protein-containing complex destabilizing activity","termid":"GO:0140776"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"ATP-dependent protein disaggregase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein disaggregase activity","type":"broad"},{"name":"protein unfoldase activity","type":"broad"}],"termid":"GO:0140545","terms_by_termid":{"GO:0140545":null}}


id: GO:0050484
data:
  {"annotated_genes":["SJAG_01055"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113354],"is_not":false,"summary":null,"term":"GO:0050484"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'-GMP + H2O = guanosine + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-nucleotidase activity","termid":"GO:0008253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01055":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"GMP 5'-nucleotidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-7609","RHEA:27714"],"synonyms":[{"name":"GMP 5' nucleotidase activity","type":"exact"},{"name":"IMP-GMP specific 5'-nucleotidase activity","type":"related"}],"termid":"GO:0050484","terms_by_termid":{"GO:0050484":null}}


id: GO:0015716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phosphonates into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A phosphonate is any salt, anion, or ester of phosphonic acid (HPO(OH)2).","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"organic phosphonate transport","secondary_identifiers":["GO:0042916"],"synonyms":[{"name":"alkylphosphonate transport","type":"narrow"}],"termid":"GO:0015716"}


id: PBO:0035975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_dNTP_level","termid":"PBO:0035975"}


id: PBO:0085360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoprotein involved in vacuole inheritance; degraded in late M phase of the cell cycle; acts as a vacuole-specific receptor for myosin Myo2p; involved in regulation of asymmetric inheritance of aggregated/misfolded proteins and age reset","termid":"PBO:0085360"}


id: PBO:0000663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn5","termid":"PBO:0000663"}


id: PBO:0011466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inheritance GTPase, tubulin-like (predicted)","termid":"PBO:0011466"}


id: GO:0046720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of citric acid, 2-hydroxy-1,2,3-propanetricarboxylic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate transport","termid":"GO:0015746"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"citric acid secretion","synonyms":[{"name":"citrate secretion","type":"exact"}],"termid":"GO:0046720"}


id: GO:0018313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein active site cross-link from the alpha-carboxyl carbon of residue N, an alanine, to the alpha-amino nitrogen of residue N+2, a glycine, coupled with the formation of a double bond to the alpha-amino nitrogen of residue N+1 which loses one hydrogen, and the loss of a molecule of water.","definition_xrefs":["RESID:AA0187"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-alanyl-5-imidazolinone glycine (obsolete GO:0018313)","termid":"GO:0018313"}


id: GO:0031244
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the cell outer membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of cell outer membrane","synonyms":[{"name":"extrinsic to cell outer membrane","type":"narrow"}],"termid":"GO:0031244"}


id: GO:0043306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mast cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of mast cell degranulation","termid":"GO:0043304"},{"relation_name":"positively_regulates","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell degranulation","synonyms":[{"name":"activation of mast cell degranulation","type":"narrow"},{"name":"positive regulation of mast cell granule exocytosis","type":"exact"},{"name":"stimulation of mast cell degranulation","type":"narrow"},{"name":"up regulation of mast cell degranulation","type":"exact"},{"name":"up-regulation of mast cell degranulation","type":"exact"},{"name":"upregulation of mast cell degranulation","type":"exact"}],"termid":"GO:0043306"}


id: PBO:0041036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRAF pseudogene 1","termid":"PBO:0041036"}


id: PBO:0068305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 10","termid":"PBO:0068305"}


id: PBO:0076256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small vasohibin binding protein","termid":"PBO:0076256"}


id: MOD:01547
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01547"}


id: PBO:0057121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 205","termid":"PBO:0057121"}


id: PBO:0027469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_NAD(P)H_oxidase_activity","termid":"PBO:0027469"}


id: GO:0017118
data:
  {"annotated_genes":["SJAG_01164"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101351],"is_not":false,"summary":null,"term":"GO:0017118"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lipoyl-5'-AMP + L-lysyl-[lipoyl-carrier protein] = (R)-N6-lipoyl-L-lysyl-[lipoyl-carrier protein] + AMP + 2 H+.","definition_xrefs":["RHEA:20473","PMID:10103005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"lipoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017118","terms_by_termid":{"GO:0017118":null}}


id: PBO:0070828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 7","termid":"PBO:0070828"}


id: PBO:0003796
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome","termid":"PBO:0003796"}


id: PR:Q9Y800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug97 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 97 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.11c","synonyms":[{"name":"Spom972h-mug97","type":"exact"},{"name":"meiotic expression up-regulated protein 33 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y800"}


id: GO:0005080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein kinase C.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein kinase C binding","secondary_identifiers":["GO:0097024","GO:0072568","GO:0072569"],"synonyms":[{"name":"PKC alpha binding","type":"exact"},{"name":"PKC binding","type":"exact"},{"name":"PKC delta binding","type":"exact"},{"name":"PKC eta binding","type":"exact"},{"name":"protein kinase C alpha binding","type":"narrow"},{"name":"protein kinase C delta binding","type":"narrow"},{"name":"protein kinase C eta binding","type":"narrow"}],"termid":"GO:0005080"}


id: GO:0004736
data:
  {"annotated_genes":["SJAG_00464"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101558],"is_not":false,"summary":null,"term":"GO:0004736"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + bicarbonate + pyruvate = ADP + 2 H+ + oxaloacetate + phosphate.","definition_xrefs":["EC:6.4.1.1","RHEA:20844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"pyruvate carboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00344","MetaCyc:PYRUVATE-CARBOXYLASE-RXN","Reactome:R-HSA-70501"],"synonyms":[{"name":"pyruvate:carbon-dioxide ligase (ADP-forming)","type":"related"},{"name":"pyruvic carboxylase activity","type":"related"}],"termid":"GO:0004736","terms_by_termid":{"GO:0004736":null}}


id: GO:0043863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-2-ketopimelate = succinate semialdehyde + pyruvate.","definition_xrefs":["MetaCyc:4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-2-ketopimelate aldolase activity","secondary_identifiers":["RHEA:25788"],"synonyms":[{"name":"2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase activity","type":"exact"},{"name":"HHED aldolase activity","type":"exact"},{"name":"HpaI","type":"related"},{"name":"HpcH","type":"related"}],"termid":"GO:0043863"}


id: PBO:0068741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 4, pseudogene","termid":"PBO:0068741"}


id: PBO:0027299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_cell_cycle_arrest_phenotype","termid":"PBO:0027299"}


id: GO:0009139
data:
  {"annotated_genes":["SJAG_04657","SJAG_00779","SJAG_02874","SJAG_04665","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[91538,103386,88460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[114198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[114200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[111740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate biosynthetic process","termid":"GO:0009133"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate metabolic process","termid":"GO:0009138"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside diphosphate anabolism","type":"exact"},{"name":"pyrimidine nucleoside diphosphate biosynthesis","type":"exact"},{"name":"pyrimidine nucleoside diphosphate formation","type":"exact"},{"name":"pyrimidine nucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009139","terms_by_termid":{"GO:0006225":null,"GO:0006227":null,"GO:0006233":null,"GO:0006240":null,"GO:0046705":null}}


id: PBO:0004234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh1","termid":"PBO:0004234"}


id: GO:0034900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(N-formyl)-formiminopyruvate + H2O = 3-formiminopyruvate + formate.","definition_xrefs":["UM-BBD_reactionID:r1399"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-(N-formyl)-formiminopyruvate hydrolase activity (obsolete GO:0034900)","termid":"GO:0034900"}


id: GO:0061756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a leukocyte to vascular endothelial cell via adhesion molecules.","definition_xrefs":["GOC:add","GOC:BHF","GOC:BHF_miRNA","PMID:23897866","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}


id: GO:2001195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysine biosynthetic process via alpha-aminoadipate and saccharopine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lysine biosynthetic process via aminoadipic acid","termid":"GO:1902987"},{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:2001194"},{"relation_name":"negatively_regulates","term_name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:0051975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"negative regulation of lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"negative regulation of lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:2001195"}


id: PBO:0051607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 31 receptor A","termid":"PBO:0051607"}


id: GO:0009471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class III cytochrome c (obsolete GO:0009471)","synonyms":[{"name":"class III cytochrome c","type":"exact"}],"termid":"GO:0009471"}


id: GO:0080183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as the result of a photooxidative stress, the light-dependent generation of active oxygen species. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism.","definition_xrefs":["DOI:10.1111/j.1399-3054.1994.tb03042.x"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to photooxidative stress","termid":"GO:0080183"}


id: PBO:0081107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 1","termid":"PBO:0081107"}


id: GO:0090236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in somitogenesis (obsolete GO:0090236)","termid":"GO:0090236"}


id: PBO:0045678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein 2 intermediate chain 2","termid":"PBO:0045678"}


id: PBO:0068096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 403","termid":"PBO:0068096"}


id: GO:0031044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 8 O-glycan structure, Gal-alpha-(1->3)-GalNAc.","definition_xrefs":["GOC:pr","PMID:10580130","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete O-glycan processing, core 8 (obsolete GO:0031044)","termid":"GO:0031044"}


id: GO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of DNA transposition.","definition_xrefs":["GOC:dph","GOC:krc","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transposition, DNA-mediated (obsolete GO:0000335)","synonyms":[{"name":"down regulation of DNA transposition","type":"exact"},{"name":"down-regulation of DNA transposition","type":"exact"},{"name":"downregulation of DNA transposition","type":"exact"},{"name":"inhibition of DNA transposition","type":"narrow"},{"name":"negative regulation of DNA transposition","type":"exact"}],"termid":"GO:0000335"}


id: GO:0030010
data:
  {"annotated_genes":["SJAG_03581","SJAG_02838","SJAG_00030","SJAG_04322","SJAG_01456","SJAG_03453","SJAG_02737","SJAG_00216","SJAG_03126","SJAG_03705","SJAG_01794","SJAG_04509","SJAG_04624","SJAG_03486","SJAG_03596","SJAG_00317","SJAG_01901","SJAG_03625","SJAG_00845","SJAG_01373","SJAG_04522","SJAG_02536","SJAG_03754","SJAG_02695","SJAG_04653","SJAG_04724","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83927,85401,85896,86872,88292,89511,92386,93043,93269,100761,110960],"is_not":false,"summary":null,"term":"GO:0030010"},{"annotations":[112654,114083,106899,84089,95821,99598,102970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[100760,115417,88608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061171"},{"annotations":[93044,113120],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000132"},{"annotations":[86986],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904846"},{"annotations":[103740,108622,99814],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061173"},{"annotations":[103741,112758],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[108111,90625],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000114"}]},"cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00216":null,"SJAG_00317":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_01456":null,"SJAG_01794":null,"SJAG_01901":null,"SJAG_02536":null,"SJAG_02695":null,"SJAG_02737":null,"SJAG_02838":null,"SJAG_03126":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03705":null,"SJAG_03754":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04624":null,"SJAG_04653":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of cell polarity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"secondary_identifiers":["GO:0030468","GO:0000283"],"synonyms":[{"name":"bud site selection/establishment of cell polarity","type":"narrow"},{"name":"cell polarization","type":"exact"}],"termid":"GO:0030010","terms_by_termid":{"GO:0000132":null,"GO:0030010":null,"GO:0051523":null,"GO:0061171":null,"GO:0061173":null,"GO:1904846":null,"GO:2000114":null,"GO:2000784":null}}


id: PBO:0078261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon ACA) 1-1","termid":"PBO:0078261"}


id: PBO:0088628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Spb1","termid":"PBO:0088628"}


id: GO:0071753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgM isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and in its circulating form complexed with J chain in polymeric forms. An IgM immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:20176268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgM immunoglobulin complex","termid":"GO:0071753"}


id: FYPO:0007193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mitochondria are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"small fragmented mitochondria","synonyms":[{"name":"small mitochondria during mitotic cell cycle","type":"related"},{"name":"small mitochondria during vegetative growth","type":"exact"}],"termid":"FYPO:0007193"}


id: PBO:0085338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoglucomutase, minor isoform; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; PGM1 has a paralog, PGM2, that arose from the whole genome duplication","termid":"PBO:0085338"}


id: PBO:0076717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 24","termid":"PBO:0076717"}


id: GO:0030850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid.","definition_xrefs":["PMID:11839751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"urogenital system development","termid":"GO:0001655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate gland development","synonyms":[{"name":"prostate development","type":"exact"}],"termid":"GO:0030850"}


id: FYPO:0002176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has normal volume and dimensions and is viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"viable vegetative cell with normal cell size","synonyms":[{"name":"viable cell with normal cell size during vegetative growth","type":"exact"},{"name":"viable vegetative cell with normal cell length","type":"narrow"},{"name":"viable vegetative cell with normal cell size during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002176"}


id: PBO:0029492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_meiosis_II","termid":"PBO:0029492"}


id: GO:0051879
data:
  {"annotated_genes":["SJAG_01914","SJAG_03955","SJAG_00750","SJAG_03784","SJAG_00112"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73882,75318,75518,76699,78513],"is_not":false,"summary":null,"term":"GO:0051879"}]},"cv_name":"molecular_function","definition":"Binding to Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock protein binding","termid":"GO:0031072"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00750":null,"SJAG_01914":null,"SJAG_03784":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"Hsp90 protein binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Hsp90 binding","type":"exact"},{"name":"Hsp90 class protein binding","type":"exact"}],"termid":"GO:0051879","terms_by_termid":{"GO:0051879":null}}


id: PBO:0044714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 1 (pseudogene)","termid":"PBO:0044714"}


id: MOD:01972
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl coenzyme A thioester.","definition_xrefs":["PubMed:16253988","PubMed:20977214","PubMed:7915164","RESID:AA0614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl coenzyme A thioester","synonyms":[{"name":"(2S)-2-amino-5-(2-[([3-([(2R)-2-hydroxy-3,3-dimethyl-4-([3'-phospho-adenosyl-5'-diphosphoryl]-oxy)-butanoyl]-amino)-propanoyl]-amino)-ethyl]-sulfanyl)-5-oxopentanoic acid","type":"exact"},{"name":"(2S)-2-amino-5-([2-(3-[(2R)-2-hydroxy-3,3-dimethyl-4-([3'-phospho-adenosyl-5'-diphosphoryl]-oxy)-butanamido]-propanamido)-ethyl]-sulfanyl)-5-oxopentanoic acid","type":"exact"},{"name":"5-glutamyl 4-[(3'-phospho-adenosyl-5'-diphosphoryl)oxy]pantetheine thioester","type":"exact"},{"name":"5-glutamyl coenzyme A thioester","type":"exact"},{"name":"5-glutamyl coenzyme A thioester intermediate","type":"exact"}],"termid":"MOD:01972"}


id: PBO:0068654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 35, pseudogene","termid":"PBO:0068654"}


id: PBO:0061853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin 3","termid":"PBO:0061853"}


id: PBO:0075071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 121A","termid":"PBO:0075071"}


id: PBO:0077413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 150A","termid":"PBO:0077413"}


id: MOD:00337
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carbamoyl-L-cysteine.","definition_xrefs":["PubMed:12586941","RESID:AA0332","PubMed:240389","Unimod:5#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbamoylated residue","termid":"MOD:00398"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-carbamoyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(carbamoylsulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(aminocarbonyl)sulfanylpropanoic acid","type":"exact"},{"name":"2-amino-3-(aminocarbonyl)thiopropanoic acid","type":"exact"},{"name":"MOD_RES S-carbamoylcysteine","type":"exact"},{"name":"S-(aminocarbonyl)cysteine","type":"exact"},{"name":"S-carbamoyl-L-cysteine","type":"exact"},{"name":"S-carbamoylcysteine","type":"exact"},{"name":"S-carbamylcysteine","type":"exact"},{"name":"S-cysteinyl carbamate ester","type":"exact"},{"name":"SCbmCys","type":"exact"},{"name":"alpha-amino-beta-carbamylthiopropionic acid","type":"exact"},{"name":"beta-carbamylthioalanine","type":"exact"}],"termid":"MOD:00337"}


id: GO:0061910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an autophagosome fuses with an endosome to create an intermediate autophagic organelle called amphisome.","definition_xrefs":["PMID:24219988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0061024","GO:0044248","GO:0006914"],"is_obsolete":false,"name":"autophagosome-endosome fusion","termid":"GO:0061910"}


id: PATO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape that is half of a sphere.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemispheroid","termid":"PATO:0005000"}


id: GO:2000042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of double-strand break repair via homologous recombination.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair via homologous recombination","termid":"GO:0010569"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"negative regulation of double-strand break repair","termid":"GO:2000780"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"negative regulation of double-strand break repair via homologous recombination","synonyms":[{"name":"negative regulation of HDR","type":"exact"},{"name":"negative regulation of HRR","type":"exact"},{"name":"negative regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"negative regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"negative regulation of homologous recombinational repair","type":"exact"},{"name":"negative regulation of homology-directed repair","type":"exact"}],"termid":"GO:2000042"}


id: GO:0033882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choloyl-CoA + H2O = cholate + CoA.","definition_xrefs":["EC:3.1.2.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"choloyl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:3.1.2.27-RXN","RHEA:14541"],"synonyms":[{"name":"PTE-2","type":"related"},{"name":"chenodeoxycholoyl-coenzyme A thioesterase activity","type":"related"},{"name":"choloyl-coenzyme A thioesterase activity","type":"related"},{"name":"peroxisomal acyl-CoA thioesterase 2 activity","type":"narrow"}],"termid":"GO:0033882"}


id: PBO:0081768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 700","termid":"PBO:0081768"}


id: PR:O14143
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3G6.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3G6.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.07","synonyms":[{"name":"Spom972h-SPAC3G6.07","type":"exact"}],"termid":"PR:O14143"}


id: PBO:0043897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1 pseudogene 4","termid":"PBO:0043897"}


id: GO:0102433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + O2 + an N10-formyl-tetrahydrofolate = L-tyrosine + a 10-formyltetrahydrofolate-4a-carbinolamine.","definition_xrefs":["GOC:pz","EC:1.14.16.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phenylalanine 4-hydroxylase (N10-formyl-tetrahydrofolate dependent) activity","secondary_identifiers":["MetaCyc:RXN-13907"],"termid":"GO:0102433"}


id: PBO:0029162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0029162"}


id: PBO:0088284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase Pgm2","termid":"PBO:0088284"}


id: FYPO:0001506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylcholine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular phosphatidylcholine level","synonyms":[{"name":"normal cellular PC level","type":"exact"},{"name":"normal cellular phosphatidylcholine accumulation","type":"related"},{"name":"normal cellular phosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylcholine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001506"}


id: PBO:0084245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner plaque spindle pole body (SPB) component; gamma-tubulin small complex (gamma-TuSC) receptor that interacts with Spc98p to recruit the complex to the nuclear side of the SPB, connecting nuclear microtubules to the SPB; promotes gamma-TuSC assembly and oligomerization to initiate microtubule nucleation; interacts with Tub4p-complex and calmodulin; phosphorylated by Mps1p in cell cycle-dependent manner; ortholog of human pericentrin (kendrin)","termid":"PBO:0084245"}


id: PBO:0005730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf20","termid":"PBO:0005730"}


id: MOD:00621
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15939799","Unimod:302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"menadione quinone derivative","synonyms":[{"name":"Menadione","type":"related"},{"name":"Menadione quinone derivative","type":"related"}],"termid":"MOD:00621"}


id: GO:0043202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the lysosomal membrane.","definition_xrefs":["PMID:15213228","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lysosomal lumen","termid":"GO:0043202"}


id: FYPO:0007415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere maintenance, i.e. any process that contributes to the maintenance of proper telomeric length and structure, is abnormal.","definition_xrefs":["GO:0000723","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomere maintenance","synonyms":[{"name":"telomere maintenance defects","type":"exact"}],"termid":"FYPO:0007415"}


id: PBO:0083228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with YCR047C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083228"}


id: PBO:0088482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S24","termid":"PBO:0088482"}


id: FYPO:0007569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling is abnormal SIN signaling is mediated by the small GTPase Ras, and results in the initiation of contraction of the contractile ring at the beginning of cytokinesis and cell division by septum formation.","definition_xrefs":["GO:0031028","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000298","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal septation initiation network signaling","synonyms":[{"name":"abnormal SIN signaling","type":"exact"},{"name":"abnormal SIN signalling","type":"exact"},{"name":"abnormal septation initiation network signaling during mitotic cell cycle","type":"related"},{"name":"abnormal septation initiation network signaling during vegetative growth","type":"exact"},{"name":"abnormal septation initiation network signalling","type":"exact"},{"name":"abnormal septation initiation signaling","type":"exact"}],"termid":"FYPO:0007569"}


id: PBO:0040964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 35","termid":"PBO:0040964"}


id: GO:0007508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larval heart over time, from its formation to the mature structure. In Drosophila the larval heart (dorsal vessel) is a continuous tube of mesodormal cells that runs beneath the dorsal midline of the epidermis, divided into an anterior aorta and a posterior heart proper.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart development","termid":"GO:0007507"},{"relation_name":"part_of","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval heart development","termid":"GO:0007508"}


id: GO:0046223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aflatoxin, a fungal metabolite found as a contaminant in moldy grains that induces liver cancer. Aflatoxin induces a G to T transversion at codon 249 of p53, leading to its inactivation. Aflatoxin is converted to a chemical carcinogen by P450.","definition_xrefs":["GOC:ai","PMID:20807200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin catabolic process","termid":"GO:0043387"},{"relation_name":"is_a","term_name":"aflatoxin metabolic process","termid":"GO:0046222"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound catabolic process","termid":"GO:1901377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0019748","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"aflatoxin catabolic process","synonyms":[{"name":"aflatoxin breakdown","type":"exact"},{"name":"aflatoxin catabolism","type":"exact"},{"name":"aflatoxin degradation","type":"exact"}],"termid":"GO:0046223"}


id: PBO:0087218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold protein; assists in association of proteasome core particle with regulatory particle; inhibitor of proteasome in vivo and in vitro; inhibits proteasomal ATPase activity; degraded by the mature proteasome after assembly; contains HEAT-like repeats; protein increases in abundance and relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087218"}


id: PR:O14072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A manganese-transporting ATPase 13A1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01219","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese-transporting ATPase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.07c","secondary_identifiers":["UniProtKB:O14072"],"synonyms":[{"name":"Spom972h-ATP13A1","type":"exact"}],"termid":"PR:O14072"}


id: GO:0080095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylethanolamine + a sterol = a sterol ester + a lysophosphatidylethanolamine.","definition_xrefs":["PMID:16020547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidylethanolamine-sterol O-acyltransferase activity","termid":"GO:0080095"}


id: PBO:0044321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 1","termid":"PBO:0044321"}


id: GO:0019959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-8.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-X-C chemokine binding","termid":"GO:0019958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-8 binding","synonyms":[{"name":"IL-8 binding","type":"exact"}],"termid":"GO:0019959"}


id: PBO:0079891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase homolog","termid":"PBO:0079891"}


id: PBO:0088824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lem2-Nur1 complex subunit Nur1","termid":"PBO:0088824"}


id: GO:0045340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mercury ion (Hg2+).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mercury ion binding","synonyms":[{"name":"Hg ion binding","type":"exact"},{"name":"mercury binding","type":"exact"}],"termid":"GO:0045340"}


id: PBO:0051773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imprinted in Prader-Willi syndrome","termid":"PBO:0051773"}


id: GO:0044520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of vasoactive intestinal polypeptide receptor activity in another organism","termid":"GO:0044519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044520"}


id: FYPO:0003644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect during a cellular response to thiamine starvation. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to thiamine starvation","termid":"FYPO:0001244"},{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to thiamine starvation","synonyms":[{"name":"RNA absent from cell during cellular response to thiamine starvation during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to thiamine starvation during vegetative growth","type":"exact"},{"name":"RNA absent from cell during cellular response to vitamin B1 starvation","type":"exact"},{"name":"transcripts absent from cell during cellular response to thiamine starvation","type":"exact"},{"name":"undetectable RNA level during cellular response to thiamine starvation","type":"exact"}],"termid":"FYPO:0003644"}


id: PBO:0064582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member C","termid":"PBO:0064582"}


id: PBO:0001747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic glycine-tRNA ligase Grs1 (predicted)","termid":"PBO:0001747"}


id: PBO:0003243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S16 (predicted)","termid":"PBO:0003243"}


id: GO:0090440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of abscisic acid from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"abscisic acid transmembrane transporter activity","synonyms":[{"name":"abscisic acid transporter activity","type":"exact"}],"termid":"GO:0090440"}


id: PBO:0067818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 120","termid":"PBO:0067818"}


id: PBO:0000428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z3","termid":"PBO:0000428"}


id: PBO:0038910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E5","termid":"PBO:0038910"}


id: PBO:0076739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 11 like 1","termid":"PBO:0076739"}


id: _global:has_cross_section
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"s3 has_cross_section s3 if and only if : there exists some 2d plane that intersects the bearer of s3, and the impression of s3 upon that plane has shape quality s2.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_cross_section","termid":"_global:has_cross_section"}


id: GO:0043971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 18 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K18 acetylation (obsolete GO:0043971)","synonyms":[{"name":"histone H3 acetylation at K18","type":"exact"},{"name":"histone H3K18 acetylation","type":"exact"}],"termid":"GO:0043971"}


id: PATO:0001653
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a proper spatial positioning with respect to an additional entity.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alignment","termid":"PATO:0001652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aligned with","synonyms":[{"name":"aligned ","type":"exact"},{"name":"aligned to","type":"related"}],"termid":"PATO:0001653"}


id: PBO:0036161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_microtubule_polymerization","termid":"PBO:0036161"}


id: GO:0001854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3d product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"complement component C3d binding","termid":"GO:0001854"}


id: PBO:0061814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 4 Y-linked","termid":"PBO:0061814"}


id: PBO:0081028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 10","termid":"PBO:0081028"}


id: PR:P36581
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calnexin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11073:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.11c","secondary_identifiers":["UniProtKB:P36581"],"synonyms":[{"name":"SPAC3C7.11c","type":"related"},{"name":"Spom972h-CANX","type":"exact"},{"name":"cnx1","type":"related"}],"termid":"PR:P36581"}


id: PR:O60069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase swf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.07","synonyms":[{"name":"Spom972h-swf1","type":"exact"}],"termid":"PR:O60069"}


id: GO:0043231
data:
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id: PBO:0034331
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id: GO:0098509
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id: PBO:0061224
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id: PBO:0069496
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id: GO:0016711
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id: PBO:0046703
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id: PBO:0069926
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id: PBO:0042058
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 121","termid":"PBO:0042058"}


id: PBO:0066064
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id: PATO:0001166
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001166 urine enzyme composition (obsolete PATO:0001166)","termid":"PATO:0001166"}


id: PBO:0034214
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id: PBO:0054032
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1363","termid":"PBO:0054032"}


id: PBO:0075305
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 3","termid":"PBO:0075305"}


id: GO:0051123
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id: GO:0001086
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id: GO:1905538
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a polysome.","definition_xrefs":["PMID:18426977","GOC:bc","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete polysome binding (obsolete GO:1905538)","synonyms":[{"name":"polyribosome binding","type":"exact"}],"termid":"GO:1905538"}


id: GO:0008856
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id: GO:0046210
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitric oxide catabolic process","synonyms":[{"name":"nitric oxide breakdown","type":"exact"},{"name":"nitric oxide catabolism","type":"exact"},{"name":"nitric oxide degradation","type":"exact"}],"termid":"GO:0046210"}


id: FYPO:0004548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"normal protein kinase activity during cellular response to HU","type":"exact"},{"name":"normal protein kinase activity in response to hydroxyurea","type":"related"}],"termid":"FYPO:0004548"}


id: FYPO:0001250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin is lower than in wild type. In cells with decreased origin firing efficiency, genomic DNA replication initiates from fewer origins than wild type, and is completed in fewer, larger segments, than wild type.","definition_xrefs":["PMID:18799612","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"decreased origin firing efficiency","synonyms":[{"name":"decreased origin firing efficiency during mitotic cell cycle","type":"related"},{"name":"decreased origin firing efficiency during vegetative growth","type":"exact"},{"name":"reduced origin firing efficiency","type":"exact"}],"termid":"FYPO:0001250"}


id: FYPO:0004301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GO:0051306","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic sister chromatid separation","synonyms":[{"name":"normal mitotic chromosome separation","type":"exact"},{"name":"normal mitotic sister chromatid disjunction","type":"related"},{"name":"normal mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"normal sister chromatid separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004301"}


id: GO:1904679
data:
  {"annotated_genes":["SJAG_04506","SJAG_03595"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88594,94117],"is_not":false,"summary":null,"term":"GO:1904679"}]},"cv_name":"biological_process","definition":"The directed movement of myo-inositol from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","PMID:9560432","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"myo-inositol transport","termid":"GO:0015798"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"myo-inositol import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097357"],"synonyms":[{"name":"myo-inositol import into cell","type":"exact"}],"termid":"GO:1904679","terms_by_termid":{"GO:1904679":null}}


id: PBO:0056683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 3","termid":"PBO:0056683"}


id: PBO:0087828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIF (Transcription Factor II) middle subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP30","termid":"PBO:0087828"}


id: PBO:0011424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate transmembrane transporter subunit Mpc2","termid":"PBO:0011424"}


id: GO:1904516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a myofibroblast cell.","definition_xrefs":["GOC:TermGenie","PMID:23026405","GO_REF:0000085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast cell apoptotic process","synonyms":[{"name":"MFB apoptosis","type":"narrow"},{"name":"MFB apoptotic process","type":"exact"},{"name":"myofibroblast cell apoptosis","type":"narrow"}],"termid":"GO:1904516"}


id: PBO:0045107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA meiotic recombinase 1","termid":"PBO:0045107"}


id: PBO:0079744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 11","termid":"PBO:0079744"}


id: PBO:0086346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P subunit of the mitochondrial glycine decarboxylase complex; glycine decarboxylase is required for the catabolism of glycine to 5,10-methylene-THF; expression is regulated by levels of 5,10-methylene-THF in the cytoplasm","termid":"PBO:0086346"}


id: GO:0140737
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Intracellular non-membrane bound organelle, consisting of proteinaceous polyhedral shells that encapsulate enzymes, protecting the contents from their surrounding milieu and/or the milieu from reactants in their interior. The self-assembling, 25-42 nm nanocompartment shell, unlike larger bacterial microcompartments, is made of only one protein, and has only a few proteins inside. Shells about vary from about 25-42 nm in diameter. The shell protein has an HK97-like fold and probably evolved from a viral protein. Artificial encapsulin nanocompartments can be expressed and filled with cargo proteins for biotechnological uses. They are found in many bacterial and a few archaeal phyla.","definition_xrefs":["PMID:32918485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"encapsulin nanocompartment","synonyms":[{"name":"protein nanocompartment","type":"broad"}],"termid":"GO:0140737"}


id: PBO:0111785
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein","termid":"PBO:0111785"}


id: PBO:0087212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent protein methyltransferase; capable of automethylation; member of the seven beta-strand family; YNL092W is not an essential gene","termid":"PBO:0087212"}


id: PBO:0018185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uracil) methyltransferase Trm44 (predicted)","termid":"PBO:0018185"}


id: GO:0097665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Mdm30 in S. cerevisiae.","definition_xrefs":["PMID:14747994","GOC:vw","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Mdm30 ubiquitin ligase complex","termid":"GO:0097665"}


id: PBO:0081060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 18","termid":"PBO:0081060"}


id: PR:B5BP45
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cystine/glutamate transporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00001","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C460.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC460.01c","secondary_identifiers":["UniProtKB:B5BP45"],"synonyms":[{"name":"Spom972h-SLC7A11","type":"exact"}],"termid":"PR:B5BP45"}


id: GO:0007111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that results in the division of the cytoplasm of a cell after meiosis II, resulting in the separation of the original cell into two daughter cells.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cytokinesis","termid":"GO:0033206"},{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiosis II cytokinesis","synonyms":[{"name":"cytokinesis after meiosis II","type":"exact"}],"termid":"GO:0007111"}


id: PBO:0110044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP3 pseudogene 1","termid":"PBO:0110044"}


id: PBO:0072239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 14","termid":"PBO:0072239"}


id: GO:0046059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dAMP, deoxyadenosine monophosphate (2'-deoxyadenosine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009172"},{"relation_name":"is_a","term_name":"dAMP metabolic process","termid":"GO:0046053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dAMP catabolic process","synonyms":[{"name":"dAMP breakdown","type":"exact"},{"name":"dAMP catabolism","type":"exact"},{"name":"dAMP degradation","type":"exact"}],"termid":"GO:0046059"}


id: GO:0000466
data:
  {"annotated_genes":["SJAG_02644","SJAG_04916","SJAG_02374","SJAG_04824","SJAG_00081","SJAG_03789","SJAG_01521","SJAG_02993","SJAG_04084","SJAG_00897","SJAG_02547","SJAG_04153","SJAG_02830","SJAG_04006","SJAG_04524","SJAG_00854","SJAG_06613","SJAG_01191","SJAG_01623","SJAG_03425","SJAG_02275","SJAG_04369","SJAG_00965","SJAG_04492","SJAG_01581","SJAG_00772","SJAG_04174","SJAG_00955","SJAG_04582","SJAG_03796","SJAG_01818","SJAG_03179","SJAG_01551","SJAG_04818","SJAG_00882","SJAG_00722","SJAG_02553","SJAG_04289","SJAG_04321","SJAG_03952","SJAG_03234","SJAG_02250","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85659,94050,102116,106947,111002],"is_not":false,"summary":null,"term":"GO:0000466"},{"annotations":[91000,87716,114730,100230],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[111557,90749,100885,101774,109644,101773,99230,101681,111469,89448,95571,104076,100665,105135,95898,114764,92855,103748,92558],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[103579,114470,95017,91965,86009,100513,104619,89098,101371,102576,98166,111604,88263,112048,93311],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000467"},{"annotations":[103580],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5.8S rRNA","termid":"GO:0000460"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00722":null,"SJAG_00772":null,"SJAG_00854":null,"SJAG_00882":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_01818":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_02830":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03745":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04174":null,"SJAG_04289":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000466","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000465":null,"GO:0000466":null,"GO:0000467":null}}


id: GO:0035530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 6 (CCL6) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","PMID:19812544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 6 production","synonyms":[{"name":"CCL6 production","type":"exact"}],"termid":"GO:0035530"}


id: PBO:0110509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 1 like, pseudogene","termid":"PBO:0110509"}


id: PBO:0069429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 694, pseudogene","termid":"PBO:0069429"}


id: GO:0032664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-20 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-20 production","termid":"GO:0032624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-20 production","secondary_identifiers":["GO:0045387"],"synonyms":[{"name":"regulation of IL-20 production","type":"exact"},{"name":"regulation of interleukin-20 biosynthetic process","type":"narrow"}],"termid":"GO:0032664"}


id: PBO:0052621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRR1 pseudogene 1","termid":"PBO:0052621"}


id: FYPO:0008228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of phosphate ions (Pi) out of a cell is abnormal.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal phosphate export","termid":"FYPO:0008228"}


id: GO:1902784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an undecane stimulus.","definition_xrefs":["PMID:23826995","GOC:TermGenie","GO_REF:0000071","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to undecane","termid":"GO:1902784"}


id: MOD:01234
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label - alkaline phosphatase to dephosphorylate","definition_xrefs":["PubMed:11467524","Unimod:258#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O monosubstituted residue","termid":"MOD:00581"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O monosubstituted L-serine","synonyms":[{"name":"Label:18O(1)","type":"related"},{"name":"O18 Labeling","type":"related"}],"termid":"MOD:01234"}


id: GO:0001659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process in which an organism modulates its internal body temperature.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"temperature homeostasis","secondary_identifiers":["Wikipedia:Thermoregulation"],"synonyms":[{"name":"thermoregulation","type":"exact"}],"termid":"GO:0001659"}


id: GO:0036095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of invasive growth as a result of deprivation of glucose, by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:14668363","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invasive growth in response to glucose limitation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0036095)","synonyms":[{"name":"transcriptional activation of genes involved in invasive growth","type":"related"}],"termid":"GO:0036095"}


id: GO:1903703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an enterocyte.","definition_xrefs":["Wikipedia:List_of_intestinal_epithelial_differentiation_genes","PMID:16782882","GO_REF:0000086","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal epithelial cell differentiation","termid":"GO:0060575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enterocyte differentiation","termid":"GO:1903703"}


id: GO:0033914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of successive xylose residues from the non-reducing termini of (1->3)-beta-D-xylans.","definition_xrefs":["EC:3.2.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"xylan 1,3-beta-xylosidase activity","secondary_identifiers":["MetaCyc:3.2.1.72-RXN"],"synonyms":[{"name":"1,3-beta-D-xylan xylohydrolase activity","type":"related"},{"name":"1,3-beta-D-xylosidase, exo-1,3-beta-xylosidase activity","type":"related"},{"name":"beta-1,3'-xylanase activity","type":"related"},{"name":"exo-1,3-beta-xylosidase activity","type":"related"},{"name":"exo-beta-1,3'-xylanase activity","type":"related"}],"termid":"GO:0033914"}


id: GO:1903247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of adrenergic receptor signaling pathway involved in positive regulation of heart rate.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie","PMID:17242280","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:1903247)","synonyms":[{"name":"activation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"activation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"activation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"activation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"activation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"positive regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"positive regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"positive regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"positive regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"positive regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"positive regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"up regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"up regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"up-regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up-regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up-regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up-regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"up-regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up-regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up-regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"upregulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"upregulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"upregulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"upregulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"upregulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"upregulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"upregulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:1903247"}


id: GO:0050836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl L-arginyl diiron disulfide.","definition_xrefs":["RESID:AA0357"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl L-arginyl diiron disulfide (obsolete GO:0050836)","termid":"GO:0050836"}


id: PBO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 1","termid":"PBO:0052583"}


id: _global:regulates_o_results_in_commitment_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relation that applies between a process that regulates cell fate commitment and the cell type that the regulated process results in commitment to.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_commitment_to","secondary_identifiers":["GOREL:0001022"],"synonyms":[{"name":"regulates_o_results_in_commitment_to","type":"exact"}],"termid":"_global:regulates_o_results_in_commitment_to"}


id: GO:0047590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-dehydro-2-deoxy-D-gluconate = ADP + 6-phospho-5-dehydro-2-deoxy-D-gluconate.","definition_xrefs":["EC:2.7.1.92","MetaCyc:5-DEHYDRO-2-DEOXYGLUCONOKINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"5-dehydro-2-deoxygluconokinase activity","secondary_identifiers":["RHEA:13497"],"synonyms":[{"name":"5-keto-2-deoxyglucono kinase (phosphorylating)","type":"related"},{"name":"5-keto-2-deoxygluconokinase activity","type":"related"},{"name":"ATP:5-dehydro-2-deoxy-D-gluconate 6-phosphotransferase activity","type":"related"},{"name":"DKH kinase activity","type":"related"}],"termid":"GO:0047590"}


id: GO:0032757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-8 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-8 production","termid":"GO:0032677"},{"relation_name":"positively_regulates","term_name":"interleukin-8 production","termid":"GO:0032637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-8 production","secondary_identifiers":["GO:0045416","GO:2000484"],"synonyms":[{"name":"activation of interleukin-8 production","type":"narrow"},{"name":"positive regulation of IL-8 production","type":"exact"},{"name":"positive regulation of interleukin-8 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-8 secretion","type":"narrow"},{"name":"stimulation of interleukin-8 production","type":"narrow"},{"name":"up regulation of interleukin-8 production","type":"exact"},{"name":"up-regulation of interleukin-8 production","type":"exact"},{"name":"upregulation of interleukin-8 production","type":"exact"}],"termid":"GO:0032757"}


id: PBO:0071071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 73","termid":"PBO:0071071"}


id: PBO:0047998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fyn related Src family tyrosine kinase","termid":"PBO:0047998"}


id: PR:O60153
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19C7.04c gene.","definition_xrefs":["UniProtKB:O60153","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19C7.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.04c","synonyms":[{"name":"Spom972h-SPBC19C7.04c","type":"exact"}],"termid":"PR:O60153"}


id: GO:0031161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol catabolic process","synonyms":[{"name":"PtdIns catabolic process","type":"exact"},{"name":"PtdIns catabolism","type":"exact"},{"name":"phosphatidylinositol breakdown","type":"exact"},{"name":"phosphatidylinositol catabolism","type":"exact"},{"name":"phosphatidylinositol degradation","type":"exact"}],"termid":"GO:0031161"}


id: PBO:0049253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRTP1 antisense RNA 1","termid":"PBO:0049253"}


id: PBO:0029939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_divided_and_undivided_germinated_spores,_with_elongated_germ_tubes_(obsolete_FYPO:0002298)","termid":"PBO:0029939"}


id: PBO:0012571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 6","termid":"PBO:0012571"}


id: GO:0033568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with lactoferrin and delivering lactoferrin into the cell via endocytosis. Lactoferrin is an iron-binding glycoprotein which binds ferric iron most efficiently at low pH.","definition_xrefs":["GOC:mlg","PMID:16261254","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"lactoferrin receptor activity","termid":"GO:0033568"}


id: PR:Q09879
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.08c","synonyms":[{"name":"Spom972h-ubp5","type":"exact"},{"name":"deubiquitinating enzyme 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09879"}


id: GO:0102785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: violaxanthin + 2 O2 = 2 5,6-epoxy-3-hydroxy-9-apo-beta-caroten-9-one + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["GOC:pz","PMID:11316814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"violaxanthin oxygenase activity","secondary_identifiers":["MetaCyc:RXN-7886"],"termid":"GO:0102785"}


id: PBO:0066256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 4","termid":"PBO:0066256"}


id: GO:0021573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 7 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:cls","GOC:curators","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 development","termid":"GO:0021573"}


id: PBO:0079622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 M","termid":"PBO:0079622"}


id: GO:0061373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary axonal complex over time, from its formation to the mature structure. The mammillary axonal complex is formed by the axons from the lateral, medial mammillary and the dorsal premammillary nuclei which share a branching pattern. Every neuron gives off one axonal stem that bifurcates into 2 branches. One of the branches is directed dorsally to the thalamus and another caudally to the midbrain.","definition_xrefs":["GOC:dph","PMID:10662642","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary body development","termid":"GO:0021767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary axonal complex development","termid":"GO:0061373"}


id: PBO:0004973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 8","termid":"PBO:0004973"}


id: PBO:0066320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring-box 1","termid":"PBO:0066320"}


id: GO:0090182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"secretion of lysosomal enzymes","termid":"GO:0033299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of secretion of lysosomal enzymes","termid":"GO:0090182"}


id: PBO:0085298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-regulated protein; proposed to be involved in mating; predicted to have 5 transmembrane segments; induced by treatment with 8-methoxypsoralen and UVA irradiation","termid":"PBO:0085298"}


id: PBO:0033820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific mitotic G1 APC coactivator Srw1/Ste9","termid":"PBO:0033820"}


id: PATO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering to a bearer by virtue of the bearer's being at the point or short after birth.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal","termid":"PATO:0002206"}


id: PBO:0069572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 844, pseudogene","termid":"PBO:0069572"}


id: GO:0052647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentitol phosphates, any phosphorylated alditol with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol phosphate metabolic process","termid":"GO:0052646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentitol phosphate metabolic process","synonyms":[{"name":"pentitol phosphate metabolism","type":"exact"}],"termid":"GO:0052647"}


id: PBO:0050075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxymethylcytosine binding, ES cell specific","termid":"PBO:0050075"}


id: PBO:0048053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 2","termid":"PBO:0048053"}


id: PBO:0080614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 48","termid":"PBO:0080614"}


id: GO:0060117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an auditory receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell development","termid":"GO:0060119"},{"relation_name":"part_of","term_name":"inner ear auditory receptor cell differentiation","termid":"GO:0042491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell development","synonyms":[{"name":"auditory hair cell development","type":"exact"}],"termid":"GO:0060117"}


id: PR:O14222
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fsv1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin-like protein fsv1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.03c","synonyms":[{"name":"Spom972h-fsv1","type":"exact"}],"termid":"PR:O14222"}


id: PBO:0060276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYH9 divergent transcript","termid":"PBO:0060276"}


id: PBO:0081170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 9","termid":"PBO:0081170"}


id: GO:1990899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process following clipping in double-strand break processing of SPO11 induced breaks, where long-tract single-stranded 3'-end DNA is generated from naked (SPO11 has been removed) 5' ends.","definition_xrefs":["PMID:26130711"],"gene_count":0,"genotype_count":0,"name":"obsolete meiotic DNA double-strand break resectioning (obsolete GO:1990899)","termid":"GO:1990899"}


id: GO:0085015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a dormant state is maintained by the symbiont within the host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dormancy maintenance of symbiont in host","synonyms":[{"name":"NRP","type":"exact"},{"name":"non-replicating persistence","type":"exact"}],"termid":"GO:0085015"}


id: GO:0015265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of urea through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transmembrane transporter activity","termid":"GO:0015204"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"urea channel activity","secondary_identifiers":["Reactome:R-HSA-507873","Reactome:R-HSA-507875"],"termid":"GO:0015265"}


id: PBO:0053974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1285","termid":"PBO:0053974"}


id: PBO:0066021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 2","termid":"PBO:0066021"}


id: PBO:0003843
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.99.1.3","termid":"PBO:0003843"}


id: PBO:0109022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gfo/Idh/MocA-like oxidoreductase domain containing 2","termid":"PBO:0109022"}


id: PBO:0069103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 351, pseudogene","termid":"PBO:0069103"}


id: GO:0046931
data:
  {"annotated_genes":["SJAG_01833"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051292"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a pore complex. A pore complex is a small opening in a membrane that allows the passage of liquids and/or gases.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01833":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"pore complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pore biosynthesis","type":"exact"},{"name":"pore complex biogenesis","type":"related"},{"name":"pore formation","type":"exact"},{"name":"pore-forming toxin activity","type":"related"}],"termid":"GO:0046931","terms_by_termid":{"GO:0051292":null}}


id: PBO:0057148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 296","termid":"PBO:0057148"}


id: GO:0120098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure that is the site of a developing centriole, which will become a microtubule organizing center. During the canonical pathway of centriole duplication that occurs during the cell division cycle, procentrioles grow at the proximal ends of both mother and daughter centrioles. In the newly divided cells, the original mother and daughter centrioles become mother centrioles while the procentrioles become the new daughter centrioles. Procentrioles can also arise from de novo pathways that occur in multiciliated cells. In ciliated epithelial cells, numerous procentrioles arise form electron dense material referred to as fibrous granules and deuterosomes. The pathway of procentriole formation in multiciliated protists appears to be similar to that in mammalian multiciliated epithelium. In sperm of primitive land plants, multiple procentrioles are formed from a blepharoplast giving rise to multicilated sperm cells.","definition_xrefs":["PMID:18620859","GOC:krc","GOC:bhm","PMID:21289083","PMID:25047614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"procentriole","termid":"GO:0120098"}


id: GO:0071153
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the guanine nucleotide exchange factor synembrin with the alpha(o) subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:mah","PMID:12509430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G-protein alpha(o)-synembrin complex","synonyms":[{"name":"Ric-8A G(o) alpha-1 subunit complex","type":"narrow"},{"name":"Ric-8A G(o) alpha-2 subunit complex","type":"narrow"}],"termid":"GO:0071153"}


id: FYPO:0003253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of one or more amino acids into the cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished amino acid import during vegetative growth","synonyms":[{"name":"abolished amino acid import across plasma membrane during vegetative growth","type":"exact"},{"name":"abolished amino acid import during mitotic cell cycle","type":"related"},{"name":"abolished amino acid import into cell","type":"exact"},{"name":"abolished amino acid uptake","type":"exact"},{"name":"amino acid import abolished","type":"exact"}],"termid":"FYPO:0003253"}


id: PBO:0058232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4521","termid":"PBO:0058232"}


id: PBO:0047958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(22)(q13)","termid":"PBO:0047958"}


id: PBO:0013843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family protein Opt3","termid":"PBO:0013843"}


id: PBO:0060387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marginal zone B and B1 cell specific protein","termid":"PBO:0060387"}


id: PBO:0029476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shortened_telomeres","termid":"PBO:0029476"}


id: RO:HOM0000015
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that is detected at the level of the 3D protein structure, but maybe not at the level of the amino acid sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_protein_structural_homology_relationship_with","synonyms":[{"name":"protein structural homologous to","type":"exact"}],"termid":"RO:HOM0000015"}


id: PBO:0063224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 4","termid":"PBO:0063224"}


id: GO:0005105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 fibroblast growth factor receptor (FGFR1).","definition_xrefs":["GOC:fb_curators","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor binding","termid":"GO:0005104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1 fibroblast growth factor receptor binding","synonyms":[{"name":"FGFR1 binding","type":"broad"},{"name":"FGFR1 ligand","type":"narrow"},{"name":"breathless binding","type":"narrow"},{"name":"breathless ligand","type":"narrow"},{"name":"type 1 fibroblast growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005105"}


id: GO:1905913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion export across the plasma membrane.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","GO_REF:0000058","PMID:22362515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"},{"relation_name":"is_a","term_name":"regulation of calcium ion export across plasma membrane","termid":"GO:1905912"},{"relation_name":"negatively_regulates","term_name":"calcium ion export across plasma membrane","termid":"GO:1990034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion export across plasma membrane","synonyms":[{"name":"down regulation of calcium ion efflux from cell","type":"exact"},{"name":"down regulation of calcium ion export from cell","type":"exact"},{"name":"down-regulation of calcium ion efflux from cell","type":"exact"},{"name":"down-regulation of calcium ion export from cell","type":"exact"},{"name":"downregulation of calcium ion efflux from cell","type":"exact"},{"name":"downregulation of calcium ion export from cell","type":"exact"},{"name":"inhibition of calcium ion efflux from cell","type":"narrow"},{"name":"inhibition of calcium ion export from cell","type":"narrow"},{"name":"negative regulation of calcium ion efflux from cell","type":"exact"},{"name":"negative regulation of calcium ion export from cell","type":"exact"}],"termid":"GO:1905913"}


id: PBO:0049878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hephaestin like 1","termid":"PBO:0049878"}


id: FYPO:0000671
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115787,115788,115789],"is_not":false,"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation at the rDNA repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000337","FYPO:0001320","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal rDNA separation","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","man1delta"],"synonyms":[{"name":"abnormal mitotic sister chromatid separation at rDNA","type":"exact"},{"name":"abnormal rDNA separation during mitosis","type":"exact"},{"name":"abnormal rDNA separation during mitotic cell cycle","type":"related"},{"name":"abnormal rDNA separation during vegetative growth","type":"exact"},{"name":"abnormal ribosomal DNA separation","type":"exact"},{"name":"abnormal segregation of nucleolar rDNA","type":"related"}],"termid":"FYPO:0000671","terms_by_termid":{"FYPO:0000671":null}}


id: GO:0001616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ghrelin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:17983853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"growth hormone secretagogue receptor activity","synonyms":[{"name":"ghrelin receptor activity","type":"exact"}],"termid":"GO:0001616"}


id: GO:0046378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving enterobacterial common antigen, an acidic polysaccharide containing N-acetyl-D-glucosamine, N-acetyl-D-mannosaminouronic acid, and 4-acetamido-4,6-dideoxy-D-galactose. A major component of the cell wall outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"enterobacterial common antigen metabolic process","synonyms":[{"name":"enterobacterial common antigen metabolism","type":"exact"}],"termid":"GO:0046378"}


id: PATO:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000023 relative compatability (obsolete PATO:0000023)","termid":"PATO:0000023"}


id: FYPO:0004746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly involved in chromatin silencing at the centromere outer repeat region does not occur.","definition_xrefs":["PMID:24240238","PomBase:mah","GO:0031507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly at centromere outer repeat during vegetative growth","termid":"FYPO:0003098"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat","synonyms":[{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere otr","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at pericentric region","type":"related"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at pericentromeric region","type":"related"},{"name":"heterochromatin assembly involved in chromatin silencing at centromere outer repeat abolished","type":"exact"}],"termid":"FYPO:0004746"}


id: GO:0031265
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed upon binding of Fas/CD95/APO-1 to its ligand. The complex includes FADD/Mort1, procaspase-8/10 and c-FLIP in addition to the ligand-bound receptor.","definition_xrefs":["PMID:12628743","PMID:12655293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex","termid":"GO:0031264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"CD95 death-inducing signaling complex","synonyms":[{"name":"CD95 DISC","type":"exact"},{"name":"CD95 death-inducing signalling complex","type":"exact"},{"name":"Fas death-inducing signaling complex","type":"exact"}],"termid":"GO:0031265"}


id: PBO:0027768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_curved_mitotic_spindle_during_anaphase","termid":"PBO:0027768"}


id: GO:0047470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-[(1->4)-alpha-D-glucosyl](n-1)-D-glucose = 1-alpha-D-[(1->4)-alpha-D-glucosyl](n-1)-alpha-D-glucopyranoside.","definition_xrefs":["EC:5.4.99.15","MetaCyc:5.4.99.15-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"(1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity","secondary_identifiers":["RHEA:13621"],"synonyms":[{"name":"(1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase","type":"broad"},{"name":"malto-oligosyltrehalose synthase activity","type":"related"},{"name":"maltodextrin alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0047470"}


id: PBO:0042844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 52","termid":"PBO:0042844"}


id: FYPO:0001314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, and structure of the cell cortex are normal when the cell is in the vegetative growth phase of the life cycle. The cell cortex is the region of a cell that lies just beneath the plasma membrane.","definition_xrefs":["PomBase:mah","GO:0005938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cortex morphology","termid":"FYPO:0001231"},{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cortex morphology during vegetative growth","synonyms":[{"name":"normal cell cortex morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001314"}


id: PBO:0052129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 1","termid":"PBO:0052129"}


id: PBO:0043685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COTL1 pseudogene 1","termid":"PBO:0043685"}


id: GO:0017197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal proline of proteins to form the derivative N-acetyl-L-proline.","definition_xrefs":["RESID:AA0050"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-proline acetylation (obsolete GO:0017197)","termid":"GO:0017197"}


id: PBO:0079441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuftelin 1","termid":"PBO:0079441"}


id: GO:0140615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the cleavage of citrate into oxaloacetate and acetyl-CoA.","definition_xrefs":["PMID:12376641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ATP-dependent citrate lyase complex","synonyms":[{"name":"citrate lyase complex","type":"broad"},{"name":"citrate synthase complex","type":"broad"}],"termid":"GO:0140615"}


id: PBO:0028138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytosolic_large_ribosomal_subunit_level","termid":"PBO:0028138"}


id: GO:0060705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features that characterize the neurons of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"is_a","term_name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron differentiation involved in salivary gland development","termid":"GO:0060705"}


id: GO:0044838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A specialized resting state that cells enter in response to cues from the cell's environment. Quiescence is characterized by the absence of cell growth and division, by a reprogramming of global gene expression, and by changes characteristic of the organism and specific cell type. Depending on external conditions, quiescence may persist until cell death or cells may resume cell growth and division. In some cell types or under certain conditions, cellular metabolism may proceed.","definition_xrefs":["GOC:jb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell quiescence","synonyms":[{"name":"G0 phase","type":"related"},{"name":"cell cycle quiescence","type":"related"},{"name":"cellular quiescence","type":"exact"},{"name":"quiescence","type":"broad"}],"termid":"GO:0044838"}


id: GO:0097560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left caudal basal body, extending cytoplasmically and exiting at the posterior end of the cell body.","definition_xrefs":["PMID:16607022","PMID:5961344","GOC:giardia","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left caudal flagellum","synonyms":[{"name":"left caudal cilium","type":"exact"}],"termid":"GO:0097560"}


