# terms

id: GO:1990818
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93431],"is_not":false,"summary":null,"term":"GO:1990818"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:26083598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-arginine transmembrane export from vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990818","terms_by_termid":{"GO:1990818":null}}


id: GO:0007540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which an organism senses the number of X chromosomes and autosomes in its genomic complement and responds to it.","definition_xrefs":["Wikipedia:XY_sex-determination_system","GOC:mr","GOC:isa_complete","PMID:20622855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"primary sex determination, soma","termid":"GO:0007539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination, establishment of X:A ratio","termid":"GO:0007540"}


id: GO:1904796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of core promoter binding.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","GOC:BHF","GOC:TermGenie","PMID:22723415","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of core promoter binding","termid":"GO:1904796"}


id: PBO:0113386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR278C is not an essential gene; overlaps tRNA-Glu/YNCD0021C","termid":"PBO:0113386"}


id: GO:0046381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving CMP-N-acetylneuraminate, a substance composed of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid in glycosidic linkage with cytidine monophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate metabolic process","synonyms":[{"name":"CMP-N-acetylneuraminate metabolism","type":"exact"}],"termid":"GO:0046381"}


id: GO:0043552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylinositol 3-kinase activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol 3-kinase activity (obsolete GO:0043552)","synonyms":[{"name":"activation of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"positive regulation of phosphoinositide 3-kinase activity","type":"exact"},{"name":"stimulation of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"up regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"up-regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"upregulation of phosphatidylinositol 3-kinase activity","type":"exact"}],"termid":"GO:0043552"}


id: GO:0032395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an MHC class II protein complex and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"MHC class II receptor activity","synonyms":[{"name":"T cell receptor activity","type":"related"},{"name":"alpha-beta T cell receptor activity","type":"related"},{"name":"gamma-delta T cell receptor activity","type":"related"}],"termid":"GO:0032395"}


id: GO:0001657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud development","termid":"GO:0001657"}


id: PBO:0086782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum, while the mCherry fusion protein localizes to the vacuole","termid":"PBO:0086782"}


id: GO:0090493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of catecholamine into a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine transport","termid":"GO:0051937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"catecholamine uptake","termid":"GO:0090493"}


id: GO:0060691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell of the salivary gland to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell maturation","termid":"GO:0002070"},{"relation_name":"part_of","term_name":"epithelial cell differentiation involved in salivary gland development","termid":"GO:0060690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell maturation involved in salivary gland development","termid":"GO:0060691"}


id: PBO:0056749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 5, N6-adenosine","termid":"PBO:0056749"}


id: GO:0032542
data:
  {"annotated_genes":["SJAG_04125"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97899],"is_not":false,"summary":null,"term":"GO:0032542"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peroxiredoxin-(S-hydroxy-S-oxocysteine) + ATP + 2 R-SH = peroxiredoxin-(S-hydroxycysteine) + ADP + phosphate + R-S-S-R.","definition_xrefs":["EC:1.8.98.2","PMID:16102934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfiredoxin activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9760094","MetaCyc:1.8.98.2-RXN","RHEA:17545"],"synonyms":[{"name":"Srx1","type":"related"},{"name":"peroxiredoxin-(S-hydroxy-S-oxocysteine) reductase activity","type":"exact"},{"name":"peroxiredoxin-(S-hydroxy-S-oxocysteine):thiol oxidoreductase [ATP-hydrolysing; peroxiredoxin-(S-hydroxycysteine)-forming]","type":"related"},{"name":"sulphiredoxin activity","type":"exact"}],"termid":"GO:0032542","terms_by_termid":{"GO:0032542":null}}


id: FYPO:0002208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a larger volume than normal and an abnormal shape. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen spore","termid":"FYPO:0002207"},{"relation_name":"is_a","term_name":"inviable spore with abnormal shape","termid":"FYPO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable swollen spore with abnormal shape","secondary_identifiers":["FYPO:0002205"],"synonyms":[{"name":"inviable enlarged spore with abnormal shape","type":"related"},{"name":"inviable large spore with abnormal shape","type":"related"},{"name":"inviable spore with increased size and abnormal shape","type":"related"},{"name":"inviable spore with increased spore size and abnormal shape","type":"related"},{"name":"inviable spore with increased spore volume and abnormal shape","type":"exact"},{"name":"inviable spore with increased volume and abnormal shape","type":"exact"},{"name":"inviable swollen abnormally shaped spore","type":"exact"},{"name":"inviable swollen misshapen spore","type":"related"},{"name":"lethal; swollen spore with abnormal shape","type":"exact"},{"name":"spore germination abolished, enlarged spore with abnormal shape","type":"related"},{"name":"spore germination abolished, large spore with abnormal shape","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and increased cell size","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and increased cell volume","type":"exact"},{"name":"spore germination abolished, swollen misshapen spores","type":"related"},{"name":"spore germination abolished, swollen spore with abnormal shape","type":"related"}],"termid":"FYPO:0002208"}


id: GO:0035212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells.","definition_xrefs":["GOC:bf","PMID:1116643","PMID:15066286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell competition in a multicellular organism","termid":"GO:0035212"}


id: PBO:0005656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup60","termid":"PBO:0005656"}


id: PBO:0046600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 2","termid":"PBO:0046600"}


id: GO:0017006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linking of a tetrapyrrole to a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-tetrapyrrole linkage","termid":"GO:0017006"}


id: PBO:0087835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiol-specific peroxiredoxin; reduces hydroperoxides to protect against oxidative damage; function in vivo requires covalent conjugation to Urm1p","termid":"PBO:0087835"}


id: GO:0018359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of protein to heme P460 via heme P460-bis-L-cysteine-L-tyrosine.","definition_xrefs":["RESID:AA0266"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-heme P460 linkage via heme P460-bis-L-cysteine-L-tyrosine (obsolete GO:0018359)","synonyms":[{"name":"protein-haem P460 linkage via haem P460-bis-L-cysteine-L-tyrosine","type":"exact"}],"termid":"GO:0018359"}


id: PBO:0075852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2 interacting protein","termid":"PBO:0075852"}


id: PBO:0076705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF4 antisense RNA 2","termid":"PBO:0076705"}


id: GO:0016527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete brain-specific angiogenesis inhibitor activity (obsolete GO:0016527)","synonyms":[{"name":"brain-specific angiogenesis inhibitor activity","type":"exact"}],"termid":"GO:0016527"}


id: GO:0042034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a C-terminal peptidyl-lysine to form peptidyl-L-lysine methyl ester.","definition_xrefs":["RESID:AA0318"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-lysine methyl ester biosynthetic process from peptidyl-lysine (obsolete GO:0042034)","synonyms":[{"name":"peptidyl-lysine esterification","type":"exact"}],"termid":"GO:0042034"}


id: GO:0001059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of RNA from a DNA template by RNA polymerase IV, originating at a Pol IV-specific promoter.","definition_xrefs":["GOC:txnOH","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transcription by RNA polymerase IV","synonyms":[{"name":"transcription from RNA pol IV promoter","type":"exact"},{"name":"transcription from RNA polymerase IV promoter","type":"exact"}],"termid":"GO:0001059"}


id: GO:0043242
data:
  {"annotated_genes":["SJAG_01894","SJAG_00279","SJAG_02700","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84292,88349,94980,110487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein-containing complex disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein complex disassembly","type":"exact"},{"name":"down-regulation of protein complex disassembly","type":"exact"},{"name":"downregulation of protein complex disassembly","type":"exact"},{"name":"inhibition of protein complex disassembly","type":"narrow"},{"name":"negative regulation of protein complex disassembly","type":"related"}],"termid":"GO:0043242","terms_by_termid":{"GO:0051016":null}}


id: MOD:00300
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamyl-5-poly(ADP-ribose).","definition_xrefs":["RESID:AA0295","PubMed:8533153","DeltaMass:0","Unimod:213#E","PubMed:11246023","PubMed:15842200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamyl-5-poly(ADP-ribose)","synonyms":[{"name":"(S)-2-amino-5-poly[2'-adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with 1alpha-D-ribofuranosyl]oxy-5-oxopentanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"L-glutamyl-5-poly(ADP-ribose)","type":"exact"},{"name":"L-isoglutamyl-poly(ADP-ribose)","type":"exact"},{"name":"MOD_RES PolyADP-ribosyl glutamic acid","type":"exact"},{"name":"O-ADP-ribosylation (on Glutamate or C terminus)","type":"exact"}],"termid":"MOD:00300"}


id: PBO:0079107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22 domain family member 2","termid":"PBO:0079107"}


id: PBO:0040507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AVL9 cell migration associated","termid":"PBO:0040507"}


id: PBO:0051720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSM transcriptional repressor 1","termid":"PBO:0051720"}


id: GO:0097444
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialization of the endomembrane system found in some classes of dendritic spines consisting of two or more closely apposed lamellae with interspersed electron dense material. The endomembrane component is continuous with the smooth endoplasmic reticulum.","definition_xrefs":["PMID:8987748","NIF_Subcellular:sao725931194","PMID:20400711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spine apparatus","synonyms":[{"name":"dense material","type":"narrow"}],"termid":"GO:0097444"}


id: GO:0035386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the Roundabout signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"Roundabout signaling pathway","termid":"GO:0035385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Roundabout signaling pathway","synonyms":[{"name":"regulation of Roundabout signalling pathway","type":"exact"}],"termid":"GO:0035386"}


id: PR:P79058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug134 gene.","definition_xrefs":["UniProtKB:P79058","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA stability protein mug134 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.16","synonyms":[{"name":"Spom972h-mug134","type":"exact"},{"name":"initiation of G zero protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79058"}


id: CHEBI:16240
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrogen peroxide","termid":"CHEBI:16240"}


id: PBO:0084952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multistep regulator of cAMP-PKA signaling; inhibits PKA downstream of Gpa2p and Cyr1p, thereby increasing cAMP dependency; inhibits Ras activity through direct interactions with Ira1p/2p; regulated by G-alpha protein Gpa2p; GPB2 has a paralog, GPB1, that arose from the whole genome duplication","termid":"PBO:0084952"}


id: PBO:0074803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13H","termid":"PBO:0074803"}


id: PBO:0002279
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.9","termid":"PBO:0002279"}


id: GO:0009120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:jl","ISBN:0140512713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxyribonucleoside metabolic process","synonyms":[{"name":"deoxyribonucleoside metabolism","type":"exact"}],"termid":"GO:0009120"}


id: SO:0000790
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that is invalidated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated","termid":"SO:0000790"}


id: FYPO:0008013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mlr","PMID:35536002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal inositol hexakisphosphate kinase activity","termid":"FYPO:0008013"}


id: PBO:0005489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec5 (predicted)","termid":"PBO:0005489"}


id: PBO:0113215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation release factor RF1; involved in stop codon recognition and hydrolysis of peptidyl-tRNA bond during mitochondrial translation; lack of MRF1 causes mitochondrial genome instability","termid":"PBO:0113215"}


id: PBO:0058688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6816","termid":"PBO:0058688"}


id: PBO:0045902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEIG family member 2","termid":"PBO:0045902"}


id: PBO:0113157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-CoA reductase; converts HMG-CoA to mevalonate, a rate-limiting step in sterol biosynthesis; one of two isozymes; overproduction induces assembly of peripheral ER membrane arrays and short nuclear-associated membrane stacks; forms foci at nuclear periphery upon DNA replication stress; primarily expressed on the peri-membrane side of the ER; human homolog HMGCR can complement yeast hmg2 mutant","termid":"PBO:0113157"}


id: GO:0038119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL19 to a C-C chemokine type 7 receptor (CCR7) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn","PMID:15059845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-C motif) ligand 19 signaling pathway","termid":"GO:0038115"},{"relation_name":"is_a","term_name":"C-C chemokine receptor CCR7 signaling pathway","termid":"GO:0038118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CCL19-activated CCR7 signaling pathway","synonyms":[{"name":"CCL19-activated CCR7 signalling pathway","type":"exact"}],"termid":"GO:0038119"}


id: GO:0047188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-hydroxy-4-aminobiphenyl + N-hydroxy-4-acetylaminonbiphenyl = N-acetoxy-4-aminobiphenyl + N-hydroxy-4-aminobiphenyl.","definition_xrefs":["MetaCyc:2.3.1.56-RXN","EC:2.3.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"aromatic-hydroxylamine O-acetyltransferase activity","secondary_identifiers":["RHEA:20325"],"synonyms":[{"name":"N,O-acetyltransferase activity","type":"related"},{"name":"N-hydroxy-2-acetylaminofluorene N-O acyltransferase activity","type":"related"},{"name":"N-hydroxy-4-acetylaminobiphenyl:N-hydroxy-4-aminobiphenyl O-acetyltransferase activity","type":"related"},{"name":"aromatic hydroxylamine acetyltransferase activity","type":"related"},{"name":"arylhydroxamate acyltransferase activity","type":"related"},{"name":"arylhydroxamic acid N,O-acetyltransferase activity","type":"related"},{"name":"arylhydroxamic acyltransferase activity","type":"related"}],"termid":"GO:0047188"}


id: GO:0045508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-26 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-26 receptor activity","synonyms":[{"name":"IL-26 receptor activity","type":"exact"},{"name":"IL-26R","type":"exact"}],"termid":"GO:0045508"}


id: MOD:01717
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino- or imino-hydrogen with a Proteome Sciences TMT6plex reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex reporter+balance reagent N-acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01717"}


id: PBO:0036104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036104"}


id: PBO:0039013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG3 like matrix AAA peptidase subunit 1, pseudogene","termid":"PBO:0039013"}


id: GO:0042805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to actinin, any member of a family of proteins that crosslink F-actin.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"actinin binding","secondary_identifiers":["GO:0051406"],"synonyms":[{"name":"beta-actinin binding","type":"narrow"},{"name":"capZ binding","type":"exact"}],"termid":"GO:0042805"}


id: FYPO:0006026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles does not occur.","definition_xrefs":["PomBase:mah","PMID:11694585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished actin filament organization","termid":"FYPO:0001010"},{"relation_name":"is_a","term_name":"abnormal actin filament bundle assembly","termid":"FYPO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished actin filament bundle assembly","synonyms":[{"name":"abolished actin bundling","type":"exact"},{"name":"abolished actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"abolished actin filament bundle assembly during vegetative growth","type":"exact"},{"name":"abolished actin filament bundle formation","type":"exact"},{"name":"actin bundling abolished","type":"exact"}],"termid":"FYPO:0006026"}


id: PR:O94703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11239:SF3","PRO:DNx","OMA:SCHPO04551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit RPA12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.03","secondary_identifiers":["UniProtKB:O94703"],"synonyms":[{"name":"DNA-directed RNA polymerase I 13.1 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ZNRD1","type":"exact"}],"termid":"PR:O94703"}


id: GO:0072390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol metabolic process","termid":"GO:0072390"}


id: GO:2000276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oxidative phosphorylation uncoupler activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transporter activity","termid":"GO:0032410"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"is_a","term_name":"regulation of oxidative phosphorylation uncoupler activity","termid":"GO:2000275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of oxidative phosphorylation uncoupler activity","synonyms":[{"name":"negative regulation of mitochondrial uncoupling protein activity","type":"related"},{"name":"negative regulation of uncoupling protein activity","type":"related"}],"termid":"GO:2000276"}


id: PBO:0038815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20 pseudogene 2","termid":"PBO:0038815"}


id: PBO:0005145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-methytransferase (predicted)","termid":"PBO:0005145"}


id: FYPO:0007072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase B of mitosis is shorter than normal. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["PMID:31427431","PomBase:mah","GO:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of cell cycle phase","termid":"FYPO:0000410"},{"relation_name":"is_a","term_name":"abnormal mitotic anaphase progression","termid":"FYPO:0000616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased duration of mitotic anaphase B","synonyms":[{"name":"decreased duration of anaphase B during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic anaphase B during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic anaphase B progression","type":"exact"},{"name":"reduced duration of mitotic anaphase B","type":"exact"}],"termid":"FYPO:0007072"}


id: FYPO:0001619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-lysine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular lysine level","synonyms":[{"name":"decreased cellular L-lysine level","type":"exact"},{"name":"decreased cellular lysine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular lysine level during vegetative growth","type":"exact"},{"name":"decreased level of lysine in cell","type":"exact"},{"name":"reduced cellular lysine level","type":"exact"},{"name":"reduced level of lysine in cell","type":"exact"}],"termid":"FYPO:0001619"}


id: PR:O60111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized aarF domain-containing protein kinase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 family protein MCP2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.02","secondary_identifiers":["UniProtKB:O60111"],"synonyms":[{"name":"Spom972h-ADCK1","type":"exact"}],"termid":"PR:O60111"}


id: PBO:0061616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 2","termid":"PBO:0061616"}


id: PBO:0091728
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sfr1 assembly at DNA damage sites is dependent on Rad51","termid":"PBO:0091728"}


id: PBO:0018266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis-specific spindle pole body WD repeat protein Wdr8","termid":"PBO:0018266"}


id: PBO:0070231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 169 pseudogene","termid":"PBO:0070231"}


id: PBO:0004655
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mei4-Dependent Expression","termid":"PBO:0004655"}


id: FYPO:0007275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion inheritance is abnormal during the meiotic cell cycle. Mitochondrion inheritance is a cellular process that results in the distribution of mitochondria into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["PomBase:mah","GO:0000001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"},{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance","termid":"FYPO:0007274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal mitochondrion inheritance during meiotic cell cycle","synonyms":[{"name":"abnormal mitochondrial inheritance during meiotic cell cycle","type":"exact"},{"name":"abnormal mitochondrion inheritance during meiosis","type":"related"}],"termid":"FYPO:0007275"}


id: PBO:0004143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase Fab1","termid":"PBO:0004143"}


id: GO:0140224
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that regulates Arp2/3 complex-mediated actin nucleation.","definition_xrefs":["PMID:22973053","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SLAC complex","termid":"GO:0140224"}


id: PBO:0052834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 1-4","termid":"PBO:0052834"}


id: GO:0009429
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the central rod of the bacterial-type flagellar basal body that is proximal to the cell membrane; the proximal rod connects the distal rod to the flagellar motor.","definition_xrefs":["GOC:cilia","PMID:12624192","PMID:10572114","PMID:11133968","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body, rod","termid":"GO:0030694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, proximal rod","synonyms":[{"name":"flagellar basal body, proximal rod","type":"exact"},{"name":"flagellin-based flagellum basal body, proximal rod","type":"exact"}],"termid":"GO:0009429"}


id: GO:0141013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of purine nucleotide from the cytosol, across the lysosomal membrane, into the lysosome.","definition_xrefs":["PMID:18375752","PMID:23876310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"purine nucleotide import into lysosome","termid":"GO:0141013"}


id: PBO:0073110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 16C member 6, pseudogene","termid":"PBO:0073110"}


id: PBO:0090759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A chaperone, NASP family, Sim3","termid":"PBO:0090759"}


id: PBO:0054106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1471","termid":"PBO:0054106"}


id: PBO:0047498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog C","termid":"PBO:0047498"}


id: GO:0051413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisone stimulus. Cortisone is a natural glucocorticoid steroid hormone that is metabolically convertible to cortisol. Cortisone is synthesized from cholesterol in the cortex of the adrenal gland under the stimulation of adrenocorticotropin hormone (ACTH). The main physiological effect of cortisone is on carbohydrate metabolism; it can stimulate increased glucose release from the liver, increased liver glycogen synthesis, and decreased utilization of glucose by the tissues.","definition_xrefs":["ISBN:0721662544","PMID:11276391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cortisone","synonyms":[{"name":"response to cortisone stimulus","type":"exact"}],"termid":"GO:0051413"}


id: GO:0060370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of causing a cell to become susceptible to T cell mediated cytotoxicity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated cytotoxicity","termid":"GO:0001916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"susceptibility to T cell mediated cytotoxicity","termid":"GO:0060370"}


id: GO:1900099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plasma cell differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of B cell differentiation","termid":"GO:0045578"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"regulation of plasma cell differentiation","termid":"GO:1900098"},{"relation_name":"negatively_regulates","term_name":"plasma cell differentiation","termid":"GO:0002317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma cell differentiation","synonyms":[{"name":"down regulation of plasma cell development","type":"related"},{"name":"down regulation of plasma cell differentiation","type":"exact"},{"name":"down-regulation of plasma cell development","type":"related"},{"name":"down-regulation of plasma cell differentiation","type":"exact"},{"name":"downregulation of plasma cell development","type":"related"},{"name":"downregulation of plasma cell differentiation","type":"exact"},{"name":"inhibition of plasma cell development","type":"related"},{"name":"inhibition of plasma cell differentiation","type":"narrow"},{"name":"negative regulation of plasma cell development","type":"related"}],"termid":"GO:1900099"}


id: PBO:0052124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily E regulatory subunit 2","termid":"PBO:0052124"}


id: GO:0090324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative phosphorylation","termid":"GO:0002082"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxidative phosphorylation","termid":"GO:0090324"}


id: GO:0018109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-arginine to form omega-N-phospho-L-arginine.","definition_xrefs":["RESID:AA0222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-arginine modification","termid":"GO:0018195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine phosphorylation","termid":"GO:0018109"}


id: GO:0021558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the trochlear nerve over time, from its formation to the mature structure. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dgh","GOC:dph","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve development","synonyms":[{"name":"CN IV development","type":"related"},{"name":"cranial nerve 4 development","type":"exact"},{"name":"cranial nerve IV development","type":"exact"}],"termid":"GO:0021558"}


id: PBO:0078600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 13","termid":"PBO:0078600"}


id: PBO:0112865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombephosphoproteomics_unige_ch_fusion_gene","termid":"PBO:0112865"}


id: PBO:0027358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actomyosin_contractile_ring_contraction","termid":"PBO:0027358"}


id: PBO:0085474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable DNA helicase; involved in sister-chromatid cohesion and genome integrity and interstrand cross-link repair; interacts with ECO1 and CTF18; mutants are defective in silencing, rDNA recombination, aging and the heat shock response; FANCJ-like helicase family member; mutations in the human homolog, DDX11/ChLR1, cause Warsaw breakage syndrome","termid":"PBO:0085474"}


id: FYPO:0005345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation begins during interphase of the cell cycle.","definition_xrefs":["PMID:9808627","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic sister chromatid separation","termid":"FYPO:0000416"},{"relation_name":"is_a","term_name":"mitotic sister chromatid separation in absence of mitotic spindle","termid":"FYPO:0007125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000337","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"mitotic sister chromatid separation during interphase","synonyms":[{"name":"advanced mitotic sister chromatid separation during interphase","type":"exact"},{"name":"chromosome separation during interphase during vegetative growth","type":"exact"},{"name":"mitotic chromosome separation during interphase","type":"exact"},{"name":"premature mitotic sister chromatid separation during interphase","type":"exact"},{"name":"premature sister chromatid separation during interphase of mitotic cell cycle","type":"related"},{"name":"sister chromatid separation during mitotic interphase","type":"exact"}],"termid":"FYPO:0005345"}


id: PBO:0017719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6, Gim1 (predicted)","termid":"PBO:0017719"}


id: PBO:0000705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid13","termid":"PBO:0000705"}


id: PATO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's magnitude of or the relationships between its repeated parts lack consistency.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular spatial pattern","termid":"PATO:0000330"}


id: PBO:0078985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon CTA) 1-1","termid":"PBO:0078985"}


id: PBO:0058336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4710","termid":"PBO:0058336"}


id: PR:Q9UTA3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A minor histocompatibility antigen H13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01737","PRO:DNx","PANTHER:PTHR12174:SF23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intramembrane protease C25B8.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.17","secondary_identifiers":["UniProtKB:Q9UTA3"],"synonyms":[{"name":"Spom972h-HM13","type":"exact"}],"termid":"PR:Q9UTA3"}


id: PBO:0061892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, long wave sensitive","termid":"PBO:0061892"}


id: PBO:0069928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1220, pseudogene","termid":"PBO:0069928"}


id: GO:0032617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The appearance of interleukin-14 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 production (obsolete GO:0032617)","synonyms":[{"name":"IL-14 production","type":"exact"},{"name":"interleukin-14 biosynthetic process","type":"narrow"},{"name":"interleukin-14 secretion","type":"narrow"}],"termid":"GO:0032617"}


id: PBO:0067320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 408, pseudogene","termid":"PBO:0067320"}


id: PBO:0039604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member D","termid":"PBO:0039604"}


id: PBO:0032765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase Erg26 (predicted)","termid":"PBO:0032765"}


id: _global:directly_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p directly regulates q iff p is immediately causally upstream of q and p regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"_global:immediately_causally_upstream_of"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulates","secondary_identifiers":["RO:0002578"],"termid":"_global:directly_regulates"}


id: GO:1904328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myofibroblast contraction.","definition_xrefs":["PMID:19239477","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based movement","termid":"GO:1903115"},{"relation_name":"regulates","term_name":"myofibroblast contraction","termid":"GO:1990764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myofibroblast contraction","synonyms":[{"name":"regulation of MF contraction","type":"exact"},{"name":"regulation of MFB contraction","type":"exact"}],"termid":"GO:1904328"}


id: PBO:0059314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L53 pseudogene 1","termid":"PBO:0059314"}


id: GO:0030997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the two centrioles within a centrosome remain tightly paired; may be mediated by the assembly and disassembly of a proteinaceous linker.","definition_xrefs":["PMID:11076968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"},{"relation_name":"regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"}


id: PBO:0069656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 933, pseudogene","termid":"PBO:0069656"}


id: PBO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATPase (predicted)","termid":"PBO:0002377"}


id: PBO:0062378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily C member 2","termid":"PBO:0062378"}


id: GO:1905126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axo-dendritic protein transport.","definition_xrefs":["PMID:20694152","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"axo-dendritic protein transport","termid":"GO:0099640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of axo-dendritic protein transport","synonyms":[{"name":"regulation of axonal protein transport","type":"narrow"}],"termid":"GO:1905126"}


id: GO:0034547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyromazine + H2O = N-cyclopropylammeline + NH3.","definition_xrefs":["UM-BBD_reactionID:r0825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N-cyclopropylmelamine deaminase activity","secondary_identifiers":["MetaCyc:RXN-8018"],"termid":"GO:0034547"}


id: GO:0010094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a floral organ primordium acquires the carpel identity. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of floral organ identity","termid":"GO:0010093"},{"relation_name":"part_of","term_name":"carpel formation","termid":"GO:0048462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of carpel identity","termid":"GO:0010094"}


id: PBO:0053547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 554","termid":"PBO:0053547"}


id: PBO:0028089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_at_centromere_central_core","termid":"PBO:0028089"}


id: PBO:0088286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1774 family multi-spanning conserved fungal membrane protein","termid":"PBO:0088286"}


id: PBO:0069962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1256, pseudogene","termid":"PBO:0069962"}


id: PBO:0047903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q11)","termid":"PBO:0047903"}


id: GO:1902816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to microtubule.","definition_xrefs":["PMID:23087209","GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to microtubule","termid":"GO:0035372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to microtubule","synonyms":[{"name":"regulation of protein localisation to microtubule","type":"exact"}],"termid":"GO:1902816"}


id: PBO:0009146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-dependent serine/threonine protein phosphatase calcineurin A, catalytic subunit Ppb1","termid":"PBO:0009146"}


id: GO:0071765
data:
  {"annotated_genes":["SJAG_01745","SJAG_03491"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87368,114352],"is_not":false,"summary":null,"term":"GO:0071765"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear inner membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03491":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear inner membrane organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear inner membrane organisation","type":"exact"},{"name":"nuclear inner membrane organization and biogenesis","type":"related"}],"termid":"GO:0071765","terms_by_termid":{"GO:0071765":null}}


id: FYPO:0005797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which microtubule bundles are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0000002","FYPO:0002399","FYPO:0005447"],"is_obsolete":false,"name":"short microtubule bundle","synonyms":[{"name":"decreased microtubule bundle length","type":"exact"},{"name":"short MT bundles","type":"exact"},{"name":"short microtubule array","type":"related"}],"termid":"FYPO:0005797"}


id: GO:0048375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lateral mesoderm cell fate determination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"is_a","term_name":"regulation of lateral mesodermal cell fate determination","termid":"GO:0048374"},{"relation_name":"negatively_regulates","term_name":"lateral mesodermal cell fate determination","termid":"GO:0048373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lateral mesodermal cell fate determination","synonyms":[{"name":"down regulation of lateral mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of lateral mesodermal cell fate determination","type":"exact"},{"name":"downregulation of lateral mesodermal cell fate determination","type":"exact"},{"name":"inhibition of lateral mesodermal cell fate determination","type":"narrow"},{"name":"negative regulation of lateral plate mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048375"}


id: PBO:0051933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITIH4 antisense RNA 1","termid":"PBO:0051933"}


id: PBO:0034572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_telomerase_RNA_reverse_transcriptase_activity","termid":"PBO:0034572"}


id: PBO:0088996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Ltc1","termid":"PBO:0088996"}


id: PATO:0002533
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A multipartite quality inhering in a bearer by virtue of the bearer being divided into two parts.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multipartite","termid":"PATO:0002510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipartite","termid":"PATO:0002533"}


id: PR:O14355
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30D10.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C30D10.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.09c","synonyms":[{"name":"Spom972h-SPBC30D10.09c","type":"exact"}],"termid":"PR:O14355"}


id: GO:0044051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released via cytolysis of symbiont cells. Cytolysis is the rupture of cell membranes and the loss of cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released by symbiont cytolysis (obsolete GO:0044051)","synonyms":[{"name":"interaction with host via substance released by cytolysis of symbiont","type":"exact"}],"termid":"GO:0044051"}


id: FYPO:0005251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tellurite (TeO3(2-)) ions. Cells stop growing (and may die) at a concentration of tellurite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to tellurite","synonyms":[{"name":"hypersensitive to tellurite","type":"exact"},{"name":"sensitive to tellurite during mitotic cell cycle","type":"related"},{"name":"sensitive to tellurite during vegetative growth","type":"exact"},{"name":"sensitive to tellurite ions","type":"exact"}],"termid":"FYPO:0005251"}


id: PBO:0085907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0085907"}


id: PBO:0029636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_stubby_vegetative_cell","termid":"PBO:0029636"}


id: GO:0051412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosterone stimulus. Corticosterone is a 21 carbon steroid hormone of the corticosteroid type, produced in the cortex of the adrenal glands. In many species, corticosterone is the principal glucocorticoid, involved in regulation of fuel metabolism, immune reactions, and stress responses.","definition_xrefs":["PMID:15240347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticosterone","synonyms":[{"name":"response to corticosterone stimulus","type":"exact"}],"termid":"GO:0051412"}


id: PBO:0080536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH and IL9R antisense RNA 1","termid":"PBO:0080536"}


id: PBO:0059931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 17","termid":"PBO:0059931"}


id: GO:0102694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + kinetin = H+ + 9-(alpha-D-glucosyl)kinetin + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kinetin UDP glycosyltransferase activity (obsolete GO:0102694)","termid":"GO:0102694"}


id: GO:1903653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts cell motility in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25049409","GO_REF:0000063","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell motility","synonyms":[{"name":"modulation by symbiont of host cell locomotion","type":"exact"},{"name":"modulation by symbiont of host cell motility","type":"exact"},{"name":"modulation by symbiont of host cell movement","type":"related"},{"name":"regulation by symbiont of host cell motility","type":"exact"}],"termid":"GO:1903653"}


id: GO:0090010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the formation of the primitive streak.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in primitive streak formation (obsolete GO:0090010)","synonyms":[{"name":"TGFbeta signaling pathway involved in primitive streak formation","type":"related"},{"name":"transforming growth factor beta receptor signalling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090010"}


id: PBO:0083638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF3j component of translation initiation factor 3 (eIF3); dual function protein involved in translation initiation as a substoichiometric component (eIF3j) of eIF3; required for 20S pre-rRNA processing; required at post-transcriptional step for efficient retrotransposition; absence decreases Ty1 Gag:GFP protein levels; binds eIF3 subunits Rpg1p, Prt1p and 18S rRNA; eIF3 also involved in programmed stop codon read through; human homolog EIF3J can complement yeast hcr1 mutant","termid":"PBO:0083638"}


id: PBO:0061984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 3","termid":"PBO:0061984"}


id: PBO:0053521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 515","termid":"PBO:0053521"}


id: GO:0042693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cellular identity of muscle cells is acquired and determined.","definition_xrefs":["CL:0000187","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell fate commitment","termid":"GO:0042693"}


id: PBO:0090138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES and SAM complex subunit Mdm10","termid":"PBO:0090138"}


id: PBO:0076520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 30","termid":"PBO:0076520"}


id: PBO:0072227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 2","termid":"PBO:0072227"}


id: GO:0043628
data:
  {"annotated_genes":["SJAG_01836","SJAG_04942","SJAG_02622","SJAG_01867","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87889,88857,114301],"is_not":false,"summary":null,"term":"GO:0043628"},{"annotations":[114275,103919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990431"},{"annotations":[103921,114278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990432"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a regulatory non-coding RNA molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"},{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01836":null,"SJAG_01867":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulatory ncRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ncRNA 3' end processing","type":"broad"},{"name":"ncRNA 3'-end processing","type":"broad"},{"name":"small regulatory ncRNA 3'-end processing","type":"narrow"}],"termid":"GO:0043628","terms_by_termid":{"GO:0043628":null,"GO:1990431":null,"GO:1990432":null}}


id: PBO:0051457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-43","termid":"PBO:0051457"}


id: PBO:0083602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; identified by homology","termid":"PBO:0083602"}


id: FYPO:0000110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to pravastatin. Cells stop growing (and may die) at a concentration of pravastatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to pravastatin","synonyms":[{"name":"hypersensitive to pravastatin","type":"exact"},{"name":"sensitive to pravastatin during mitotic cell cycle","type":"related"},{"name":"sensitive to pravastatin during vegetative growth","type":"exact"}],"termid":"FYPO:0000110"}


id: GO:0060376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mast cell differentiation, the process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a mast cell. A mast cell is a cell that is found in almost all tissues containing numerous basophilic granules and capable of releasing large amounts of histamine and heparin upon activation.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of mast cell differentiation","termid":"GO:0060375"},{"relation_name":"positively_regulates","term_name":"mast cell differentiation","termid":"GO:0060374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell differentiation","termid":"GO:0060376"}


id: FYECO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na ions","synonyms":[{"name":"sodium ions added","type":"exact"}],"termid":"FYECO:0000092"}


id: GO:0090533
data:
  {"annotated_genes":["SJAG_00136","SJAG_02023","SJAG_01397","SJAG_01447","SJAG_01817","SJAG_01913","SJAG_04955","SJAG_00516","SJAG_02470","SJAG_00212","SJAG_01471","SJAG_02782","SJAG_04015","SJAG_05294","SJAG_03406"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033176"},{"annotations":[91710,100030,96026,86189,88075,85876],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[114910,94997,97726,98776,84069,92678,96100,106013],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"Protein complex that carries out the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase dependent transmembrane transport complex","termid":"GO:0098533"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02470":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cation-transporting ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090533","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0033176":null}}


id: PBO:0001942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs120 (predicted)","termid":"PBO:0001942"}


id: PBO:0042199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin F","termid":"PBO:0042199"}


id: PBO:0058726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6854","termid":"PBO:0058726"}


id: MOD:01221
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-formyl-L-threonine.","definition_xrefs":["PubMed:11861642","PubMed:15799070","Unimod:122#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-formylated residue","termid":"MOD:01483"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-formyl-L-threonine","synonyms":[{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"}],"termid":"MOD:01221"}


id: PBO:0045595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 6 (pseudogene)","termid":"PBO:0045595"}


id: PBO:0051435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-17 (pseudogene)","termid":"PBO:0051435"}


id: PBO:0059273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 2","termid":"PBO:0059273"}


id: GO:0009152
data:
  {"annotated_genes":["SJAG_02038","SJAG_04681","SJAG_03140","SJAG_05204","SJAG_04634","SJAG_03114","SJAG_06634","SJAG_01859","SJAG_00836","SJAG_01081","SJAG_MIT09","SJAG_00964","SJAG_00985","SJAG_04122","SJAG_01661","SJAG_02887","SJAG_00438","SJAG_04422","SJAG_03355","SJAG_01471","SJAG_02598","SJAG_02364","SJAG_07003","SJAG_00915","SJAG_04849","SJAG_00133","SJAG_02850","SJAG_01814","SJAG_01070","SJAG_04123","SJAG_MIT15","SJAG_03925","SJAG_01298","SJAG_00044","SJAG_MIT37","SJAG_02564","SJAG_00542","SJAG_02105"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106508],"is_not":false,"summary":null,"term":"GO:0009152"},{"annotations":[99533,84912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[115167,110669,106506,99534,95659,93878,106394,113539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[94205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[89575,113027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[104409,59006,97284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[89796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[98339,104410,96161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[115168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[97906,89798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[66544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[104926,90887,115261,85162,101125,99772,103948,99802,112021,104038,89314,97910,88882,115250,115256,99149,89911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[114189],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[89800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00964":null,"SJAG_00985":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01471":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02364":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02850":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04123":null,"SJAG_04422":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_06634":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleotide anabolism","type":"exact"},{"name":"purine ribonucleotide biosynthesis","type":"exact"},{"name":"purine ribonucleotide formation","type":"exact"},{"name":"purine ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009152","terms_by_termid":{"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006188":null,"GO:0006189":null,"GO:0009152":null,"GO:0015986":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0042776":null,"GO:0044208":null,"GO:0044209":null,"GO:1905706":null}}


id: GO:0016241
data:
  {"annotated_genes":["SJAG_04496","SJAG_02723","SJAG_04435","SJAG_05289","SJAG_02433","SJAG_01716","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[104702,104792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[93695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[94083,102382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[85552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macroautophagy.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"regulates","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_02433":null,"SJAG_02723":null,"SJAG_03851":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006914"],"is_obsolete":false,"name":"regulation of macroautophagy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of starvation-induced autophagy","type":"exact"}],"termid":"GO:0016241","terms_by_termid":{"GO:0016239":null,"GO:0016242":null,"GO:0140501":null,"GO:1901098":null,"GO:2000786":null}}


id: FYPO:0002244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which acid phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal acid phosphatase activity","termid":"FYPO:0001044"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abolished acid phosphatase activity","synonyms":[{"name":"acid phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0002244"}


id: GO:0004492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-methylmalonyl-CoA + H+ = CO2 + propanoyl-CoA or (2S)-ethylmalonyl-CoA + H+ = butanoyl-CoA + CO2.","definition_xrefs":["PMID:22016388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methyl/ethyl malonyl-CoA decarboxylase activity","secondary_identifiers":["MetaCyc:METHYLMALONYL-COA-DECARBOXYLASE-RXN"],"synonyms":[{"name":"(S)-2-methyl-3-oxopropanoyl-CoA carboxy-lyase activity","type":"narrow"},{"name":"(S)-methylmalonyl-CoA carboxy-lyase (propanoyl-CoA-forming)","type":"narrow"},{"name":"(S)-methylmalonyl-CoA carboxy-lyase activity","type":"narrow"},{"name":"ethylmalonyl-CoA decarboxylase activity","type":"narrow"},{"name":"methylmalonyl-coenzyme A decarboxylase activity","type":"narrow"}],"termid":"GO:0004492"}


id: PBO:0082599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin coat accessory factor; involved in clathrin-mediated vesicle trafficking; may function to link the AP-1 clathrin adaptor complex with the Rab GTPase Ypt31p; has structural similarity to G-proteins; mouse homolog Aagab (p34) functionally complements irc6 null mutation; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0082599"}


id: PATO:0000914
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000914 continuant (obsolete PATO:0000914)","termid":"PATO:0000914"}


id: GO:0017041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-galactosyl-D-galactosyl-D-glucosyl-N-acylsphingosine + H2O = lactosyl-N-acylsphingosine + D-galactose.","definition_xrefs":["EC:3.2.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete galactosylgalactosylglucosylceramidase activity (obsolete GO:0017041)","synonyms":[{"name":"D-galactosyl-D-galactosyl-D-glucosyl-N-acylsphingosine galactohydrolase activity","type":"related"},{"name":"ceramide trihexosidase activity","type":"related"},{"name":"ceramidetrihexosidase activity","type":"related"},{"name":"ceramidetrihexoside alpha-galactosidase activity","type":"related"},{"name":"trihexosyl ceramide galactosidase activity","type":"related"},{"name":"trihexosylceramide alpha-galactosidase activity","type":"related"}],"termid":"GO:0017041"}


id: GO:0102072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADP + a 3R-hydroxy cis Delta9-hexadecenoyl-[acp] = NADPH + H+ + a 3-oxo-cis-Delta9-hexadecenoyl-[acp].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-cis-Delta9-hexadecenoyl-[acp] reductase activity (obsolete GO:0102072)","termid":"GO:0102072"}


id: FYPO:0003368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sodium fluoride than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to sodium fluoride","synonyms":[{"name":"resistance to NaF","type":"exact"},{"name":"resistance to fluoride","type":"broad"},{"name":"resistance to sodium fluoride during mitotic cell cycle","type":"related"},{"name":"resistance to sodium fluoride during vegetative growth","type":"exact"},{"name":"resistant to sodium fluoride","type":"exact"}],"termid":"FYPO:0003368"}


id: RO:HOM0000009
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homoplasy that involves phenotypes similar to those seen in ancestors within the lineage.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homoplasy_relationship_with","termid":"RO:HOM0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_reversal_relationship_with","synonyms":[{"name":"atavism","type":"exact"},{"name":"reversion","type":"related"},{"name":"rudiment","type":"exact"}],"termid":"RO:HOM0000009"}


id: GO:1904154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde protein transport, ER to cytosol.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GOC:bf","PMID:18555783","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein exit from endoplasmic reticulum","termid":"GO:0070863"},{"relation_name":"is_a","term_name":"regulation of retrograde protein transport, ER to cytosol","termid":"GO:1904152"},{"relation_name":"positively_regulates","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of retrograde protein transport, ER to cytosol","synonyms":[{"name":"activation of protein dislocation from ER","type":"narrow"},{"name":"activation of retrograde protein transport, ER to cytosol","type":"narrow"},{"name":"activation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"narrow"},{"name":"positive regulation of protein dislocation from ER","type":"exact"},{"name":"positive regulation of protein retrotranslocation from ER","type":"exact"},{"name":"positive regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"up regulation of protein dislocation from ER","type":"exact"},{"name":"up regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"up regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"up-regulation of protein dislocation from ER","type":"exact"},{"name":"up-regulation of protein retrotranslocation from ER","type":"exact"},{"name":"up-regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"up-regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"upregulation of protein dislocation from ER","type":"exact"},{"name":"upregulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"upregulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904154"}


id: GO:0080118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a brassinosteroid + 3'-phosphoadenosine-5'-phosphosulfate = sulfated brassinosteroid + adenosine-3',5'-diphosphate. This reaction is the transfer of a sulfate group to the hydroxyl group of a brassinosteroid acceptor, producing the sulfated brassinosteroid derivative.","definition_xrefs":["PMID:10409637","PMID:17039368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"brassinosteroid sulfotransferase activity","termid":"GO:0080118"}


id: PBO:0055411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2841","termid":"PBO:0055411"}


id: GO:0120117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The random-like motility observed for T cells in lymph nodes which enhances surveillance of antigens presented by major histocompatibility complex (MHC) molecules on antigen presenting cells (APCs).","definition_xrefs":["GOC:krc","GOC:add","PMID:25083865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell meandering migration","synonyms":[{"name":"T cell meandering search","type":"exact"},{"name":"lymph node surveillance","type":"related"}],"termid":"GO:0120117"}


id: PBO:0069916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1208, pseudogene","termid":"PBO:0069916"}


id: PBO:0051532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 3","termid":"PBO:0051532"}


id: PBO:0053717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 927","termid":"PBO:0053717"}


id: PBO:0052289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratocan","termid":"PBO:0052289"}


id: PBO:0061685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 153","termid":"PBO:0061685"}


id: CHEBI:25255
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl methanesulfonate","termid":"CHEBI:25255"}


id: GO:0018527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexylamine + O2 + H2O = cyclohexanone + NH3 + hydrogen peroxide.","definition_xrefs":["RHEA:18433","PMID:18451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary methylamine oxidase activity","termid":"GO:0008131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cyclohexylamine oxidase activity","secondary_identifiers":["EC:1.4.3.12","UM-BBD_reactionID:r0754","MetaCyc:CYCLOHEXYLAMINE-OXIDASE-RXN"],"synonyms":[{"name":"cyclohexylamine:oxygen oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0018527"}


id: GO:1904123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A serotonin receptor signaling pathway that results in positive regulation of fatty acid beta-oxidation.","definition_xrefs":["PMID:24120942","GO_REF:0000063","GOC:dph","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin receptor signaling pathway","termid":"GO:0007210"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid beta-oxidation","termid":"GO:0032000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0023052","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","synonyms":[{"name":"activation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"narrow"},{"name":"stimulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"narrow"},{"name":"up regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"exact"},{"name":"up-regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"exact"},{"name":"upregulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"exact"}],"termid":"GO:1904123"}


id: PBO:0084213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homodimeric protein that is packaged into COPII vesicles; cycles between the ER and Golgi; involved in secretory transport but not directly required for aspects of transport assayed in vitro; may influence membrane composition","termid":"PBO:0084213"}


id: GO:0046957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a cell or organism away from a source of light.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototaxis","termid":"GO:0042331"},{"relation_name":"is_a","term_name":"negative energy taxis","termid":"GO:0052129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative phototaxis","secondary_identifiers":["GO:0046955"],"synonyms":[{"name":"negative phototactic behavior","type":"exact"},{"name":"negative phototactic behaviour","type":"exact"},{"name":"negative taxis in response to light","type":"exact"}],"termid":"GO:0046957"}


id: PBO:0045896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 8","termid":"PBO:0045896"}


id: GO:0045903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the ability of the translational apparatus to interpret the genetic code.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational fidelity","termid":"GO:0006450"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translational fidelity","synonyms":[{"name":"activation of translational fidelity","type":"narrow"},{"name":"stimulation of translational fidelity","type":"narrow"},{"name":"up regulation of translational fidelity","type":"exact"},{"name":"up-regulation of translational fidelity","type":"exact"},{"name":"upregulation of translational fidelity","type":"exact"}],"termid":"GO:0045903"}


id: GO:0014730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of muscle tissue to repair injured or damaged muscle fibers in the postnatal stage at the neuromuscular junction. Regeneration of neuromuscular junctions occurs in an orderly way and relies on communication between nerve and muscle. Skeletal myofibers regenerate after injury and form neuro-muscular junctions with motor axons similar to normal ones. Regenerating myofibers develop within the basal lamina sheaths (satellite cells) of original myofibers.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle regeneration at neuromuscular junction","termid":"GO:0014730"}


id: GO:0010541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin from the base towards the apex of an organ, including the shoot, leaf, primary root, or lateral root.","definition_xrefs":["PMID:10677441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"acropetal auxin transport","termid":"GO:0010541"}


id: GO:0031415
data:
  {"annotated_genes":["SJAG_04179","SJAG_02920","SJAG_04631","SJAG_02726"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85426,106564,112979,114172],"is_not":false,"summary":null,"term":"GO:0031415"}]},"cv_name":"cellular_component","definition":"A conserved complex that catalyzes the transfer of an acetyl group to an N-terminal Ser, Ala, Gly, or Thr residue of a protein acceptor molecule. In Saccharomyces the complex includes Nat1p and Ard1p, and may contain additional proteins.","definition_xrefs":["PMID:12890471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein acetyltransferase complex","termid":"GO:0031414"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02726":null,"SJAG_02920":null,"SJAG_04179":null,"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"NatA complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-terminal acetyltransferase A complex","type":"exact"}],"termid":"GO:0031415","terms_by_termid":{"GO:0031415":null}}


id: PBO:0089102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15a","termid":"PBO:0089102"}


id: SO:0100015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The more polar, carboxy-terminal region of the signal peptide (approx 3-7 aa).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"},{"relation_name":"part_of","term_name":"signal_peptide","termid":"SO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"c_terminal_region","synonyms":[{"name":"C-region","type":"related"}],"termid":"SO:0100015"}


id: PBO:0036442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxidative stress transcription corepressor Oxs1","termid":"PBO:0036442"}


id: GO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-alanine, 3-aminopropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"beta-alanine transport","termid":"GO:0001762"}


id: PBO:0046587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 29","termid":"PBO:0046587"}


id: PBO:0076533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 50","termid":"PBO:0076533"}


id: GO:0044469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant activation, maintenance or an increase in the frequency, rate or extent of blood coagulation in the bitten organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood coagulation in another organism","termid":"GO:0044468"},{"relation_name":"is_a","term_name":"envenomation resulting in impairment of hemostasis in another organism","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of blood coagulation in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0044469"}


id: PBO:0005681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate synthase (predicted)","termid":"PBO:0005681"}


id: PBO:0079078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-6","termid":"PBO:0079078"}


id: PBO:0003391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan endo-1,3-alpha-glucosidase Agn2","termid":"PBO:0003391"}


id: PBO:0063105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARK7 pseudogene 1","termid":"PBO:0063105"}


id: PBO:0079418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 1","termid":"PBO:0079418"}


id: PATO:0000273
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reproductive quality inhering in an organism or population by virtue of the bearer's potential reproductive capacity ad measured by the number of gametes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Fecundity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive quality","termid":"PATO:0001434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fecundity","termid":"PATO:0000273"}


id: GO:1904720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mRNA endonucleolytic cleavage involved in unfolded protein response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:20625543","GOC:PARL","GOC:bf","PMID:19328063"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA endonucleolytic cleavage involved in unfolded protein response (obsolete GO:1904720)","synonyms":[{"name":"regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"regulation of XBP1 mRNA cleavage","type":"narrow"}],"termid":"GO:1904720"}


id: GO:0031314
data:
  {"annotated_genes":["SJAG_00230","SJAG_03456","SJAG_04642","SJAG_01043","SJAG_00852","SJAG_01249","SJAG_04000","SJAG_00933","SJAG_00576","SJAG_05398","SJAG_03563","SJAG_00721"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85664,86906,97369,99349,102327,102985,104304,105647,111035,113279],"is_not":false,"summary":null,"term":"GO:0031314"},{"annotations":[99883,96543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099616"}]},"cv_name":"cellular_component","definition":"The component of mitochondrial inner membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_00721":null,"SJAG_00852":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01249":null,"SJAG_03456":null,"SJAG_03563":null,"SJAG_04000":null,"SJAG_04642":null,"SJAG_05398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031314","terms_by_termid":{"GO:0031314":null,"GO:0099616":null}}


id: PBO:0039701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis inhibitor 5 pseudogene 2","termid":"PBO:0039701"}


id: GO:0033675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded vesicle found near the apical, or pericanalicular, membrane of a hepatocyte; contains proteins involved in bile salt transport and other fluid and solute transport processes.","definition_xrefs":["PMID:9790571","PMID:15763347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"pericanalicular vesicle","termid":"GO:0033675"}


id: _global:is_kinase_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"_global:molecular_interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","secondary_identifiers":["RO:0002481"],"termid":"_global:is_kinase_activity"}


id: PBO:0082251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins","termid":"PBO:0082251"}


id: GO:0120213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of histidine biosynthetic process.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of cellular amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"L-histidine biosynthetic process","termid":"GO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of histidine biosynthetic process","synonyms":[{"name":"regulation of histidine anabolism","type":"exact"},{"name":"regulation of histidine biosynthesis","type":"exact"},{"name":"regulation of histidine formation","type":"exact"},{"name":"regulation of histidine synthesis","type":"exact"}],"termid":"GO:0120213"}


id: PBO:0076581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 5","termid":"PBO:0076581"}


id: GO:0008932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the specific cleavage of the beta-(1->4) glycosidic linkage between N-acetylmuramyl and N-acetylglucosaminyl residues in peptidoglycan, with the concomitant formation of 1,6-anhydro-N-acetylmuramyl residues. Acts on linkages within peptidoglycan chains (i.e. not at the ends) to produce shorter strands with 1,6-anhydromuramic acid ends.","definition_xrefs":["PMID:10964424","PMID:9642199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic transglycosylase activity","termid":"GO:0008933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"lytic endotransglycosylase activity","secondary_identifiers":["EC:4.2.2.n2"],"synonyms":[{"name":"murein lytic endotransglycosylase E activity","type":"narrow"}],"termid":"GO:0008932"}


id: PBO:0061668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 1","termid":"PBO:0061668"}


id: GO:0034061
data:
  {"annotated_genes":["SJAG_05197","SJAG_02658","SJAG_05979","SJAG_03906","SJAG_16460","SJAG_05239","SJAG_02818","SJAG_04791","SJAG_00153","SJAG_00611","SJAG_00814","SJAG_04089","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113510,103489,95398,93508,98991,91937,101056,105258,98940,99014,112542,100114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003887"},{"annotations":[104074,104073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003720"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1).","definition_xrefs":["RHEA:22508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_02658":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04791":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_05979":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140097","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"DNA polymerase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034061","terms_by_termid":{"GO:0003720":null,"GO:0003887":null}}


id: PBO:0027597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0027597"}


id: PBO:0058102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4317","termid":"PBO:0058102"}


id: GO:0050043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate = (R)-lactate.","definition_xrefs":["EC:5.1.2.1","RHEA:10960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"lactate racemase activity","secondary_identifiers":["MetaCyc:LACTATE-RACEMASE-RXN","KEGG_REACTION:R01450"],"synonyms":[{"name":"hydroxyacid racemase activity","type":"related"},{"name":"lactic acid racemase activity","type":"related"},{"name":"lacticoracemase activity","type":"related"}],"termid":"GO:0050043"}


id: PATO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001110 absolute density value (obsolete PATO:0001110)","termid":"PATO:0001110"}


id: GO:1900093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of raffinose biosynthetic process.","definition_xrefs":["PMID:22307851","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of raffinose biosynthetic process","termid":"GO:1900091"},{"relation_name":"positively_regulates","term_name":"raffinose biosynthetic process","termid":"GO:0033529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of raffinose biosynthetic process","synonyms":[{"name":"activation of raffinose anabolism","type":"exact"},{"name":"activation of raffinose biosynthesis","type":"exact"},{"name":"activation of raffinose biosynthetic process","type":"narrow"},{"name":"activation of raffinose formation","type":"exact"},{"name":"activation of raffinose synthesis","type":"exact"},{"name":"positive regulation of raffinose anabolism","type":"exact"},{"name":"positive regulation of raffinose biosynthesis","type":"exact"},{"name":"positive regulation of raffinose formation","type":"exact"},{"name":"positive regulation of raffinose synthesis","type":"exact"},{"name":"up regulation of raffinose anabolism","type":"exact"},{"name":"up regulation of raffinose biosynthesis","type":"exact"},{"name":"up regulation of raffinose biosynthetic process","type":"exact"},{"name":"up regulation of raffinose formation","type":"exact"},{"name":"up regulation of raffinose synthesis","type":"exact"},{"name":"up-regulation of raffinose anabolism","type":"exact"},{"name":"up-regulation of raffinose biosynthesis","type":"exact"},{"name":"up-regulation of raffinose biosynthetic process","type":"exact"},{"name":"up-regulation of raffinose formation","type":"exact"},{"name":"up-regulation of raffinose synthesis","type":"exact"},{"name":"upregulation of raffinose anabolism","type":"exact"},{"name":"upregulation of raffinose biosynthesis","type":"exact"},{"name":"upregulation of raffinose biosynthetic process","type":"exact"},{"name":"upregulation of raffinose formation","type":"exact"},{"name":"upregulation of raffinose synthesis","type":"exact"}],"termid":"GO:1900093"}


id: PBO:0047957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(20)(p12.2)","termid":"PBO:0047957"}


id: PBO:0005203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane insertion protein Get4 (predicted)","termid":"PBO:0005203"}


id: GO:0070871
data:
  {"annotated_genes":["SJAG_01171","SJAG_01017","SJAG_05001","SJAG_01888","SJAG_03444","SJAG_00667","SJAG_02718","SJAG_03646"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98041,84316,96235,85127,107469,98040,104208,90067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"}]},"cv_name":"biological_process","definition":"A process of cell wall organization that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02718":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000747","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall organization involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall organisation involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0070871","terms_by_termid":{"GO:1904541":null}}


id: PR:O74409
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uricase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.09","secondary_identifiers":["UniProtKB:O74409"],"synonyms":[{"name":"Spom972h-Uox","type":"exact"},{"name":"urate oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74409"}


id: PBO:0026667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_mononucleate_vegetative_cell","termid":"PBO:0026667"}


id: GO:0098869
data:
  {"annotated_genes":["SJAG_04953","SJAG_01216","SJAG_01199","SJAG_04403","SJAG_05181","SJAG_02630","SJAG_04125","SJAG_01734","SJAG_00668","SJAG_03623","SJAG_03653","SJAG_04823","SJAG_03303","SJAG_04399","SJAG_03166","SJAG_01162","SJAG_02515","SJAG_00141","SJAG_00489","SJAG_04632","SJAG_04788"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57330,57331,63042,64698,64699,67233,67794,67795,67796,91247,101342,101427,102500,102918],"is_not":false,"summary":null,"term":"GO:0098869"},{"annotations":[91246,101161,104970,113553,114471,96088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[64533,58046,106281,95359,85015,106237,85435,89164,96246,67531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.","definition_xrefs":["GOC:vw","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular oxidant detoxification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0098869","terms_by_termid":{"GO:0019430":null,"GO:0061692":null,"GO:0098869":null}}


id: GO:0002385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response taking place in mucosal tissues, including those of the intestinal tract, nasal and upper respiratory tract, and genital tract.","definition_xrefs":["GO_REF:0000022","GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ or tissue specific immune response","termid":"GO:0002251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosal immune response","secondary_identifiers":["GO:0002422","GO:0002386"],"synonyms":[{"name":"immune response in MALT","type":"narrow"},{"name":"immune response in mucosal-associated lymphoid tissue","type":"narrow"},{"name":"immune response in urogenital tract","type":"narrow"}],"termid":"GO:0002385"}


id: GO:0036198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate) without de novo synthesis.","definition_xrefs":["GOC:yaf","PMID:5387459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dTMP biosynthetic process","termid":"GO:0006231"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide salvage","termid":"GO:0010139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dTMP salvage","synonyms":[{"name":"dTMP biosynthesis via salvage pathway","type":"related"},{"name":"deoxythymidine monophosphate biosynthesis via salvage pathway","type":"related"}],"termid":"GO:0036198"}


id: GO:0097248
data:
  {"annotated_genes":["SJAG_01017","SJAG_00661","SJAG_00030","SJAG_01738"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90068,96262,100771,107012],"is_not":false,"summary":null,"term":"GO:0097248"}]},"cv_name":"biological_process","definition":"A process in which a protein or protein complex is maintained in a specific location in the cell cortex of a cell tip, and is prevented from moving elsewhere. The cell cortex of a cell tip is the region directly beneath the plasma membrane at either end of the longest axis of a cylindrical or elongated cell.","definition_xrefs":["PMID:19646873","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell cortex","termid":"GO:0032065"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00661":null,"SJAG_01017":null,"SJAG_01738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in cell cortex of cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097248","terms_by_termid":{"GO:0097248":null}}


id: PBO:0075823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCO-spondin, pseudogene","termid":"PBO:0075823"}


id: PBO:0079353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1a","termid":"PBO:0079353"}


id: PBO:0016124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced mating-type m-specific polypeptide Mc","termid":"PBO:0016124"}


id: PBO:0028673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuolar_transport","termid":"PBO:0028673"}


id: GO:0001737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Orientation of hairs in the imaginal disc-derived wing along a proximal-distal axis, such that each cell of the wing produces one wing hair which points in a distal direction.","definition_xrefs":["GOC:ascb_2009","GOC:tb","PMID:11239465","GOC:dph","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of imaginal disc-derived wing hair orientation","synonyms":[{"name":"establishment of wing hair orientation","type":"exact"}],"termid":"GO:0001737"}


id: GO:0002838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to tumor cell","termid":"GO:0002835"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"immune response to tumor cell","termid":"GO:0002418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immune response to tumor cell","synonyms":[{"name":"down regulation of immune response to tumor cell","type":"exact"},{"name":"down-regulation of immune response to tumor cell","type":"exact"},{"name":"downregulation of immune response to tumor cell","type":"exact"},{"name":"inhibition of immune response to tumor cell","type":"narrow"},{"name":"negative regulation of immune response to tumour cell","type":"exact"}],"termid":"GO:0002838"}


id: GO:0034671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that results in the spatial identity of regions along the anterior-posterior axis of the pronephros.","definition_xrefs":["GOC:mh"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in pronephros anterior/posterior pattern specification (obsolete GO:0034671)","synonyms":[{"name":"retinoic acid receptor signaling pathway involved in pronephric kidney anterior/posterior pattern specification","type":"exact"},{"name":"retinoic acid receptor signalling pathway involved in pronephros anterior-posterior patterning","type":"exact"}],"termid":"GO:0034671"}


id: PBO:0013036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CCDC174 ortholog","termid":"PBO:0013036"}


id: GO:0009407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0019748","GO:0098754","GO:0008150"],"is_obsolete":false,"name":"toxin catabolic process","synonyms":[{"name":"toxin breakdown","type":"exact"},{"name":"toxin catabolism","type":"exact"},{"name":"toxin degradation","type":"exact"}],"termid":"GO:0009407"}


id: PBO:0090325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol 14-demethylase (cytochrome P450) Erg11","termid":"PBO:0090325"}


id: PBO:0052165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 13","termid":"PBO:0052165"}


id: FYECO:0000397
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which micafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ micafungin","termid":"FYECO:0000395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ micafungin LD","termid":"FYECO:0000397"}


id: PBO:0077146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triokinase and FMN cyclase","termid":"PBO:0077146"}


id: PBO:0015233
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer","termid":"PBO:0015233"}


id: PBO:0048455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain containing 2","termid":"PBO:0048455"}


id: PBO:0080886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N(6)-threonylcarbamoyltransferase domain containing pseudogene 2","termid":"PBO:0080886"}


id: PBO:0059091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC family CW-type zinc finger 3","termid":"PBO:0059091"}


id: GO:0060501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of epithelial cell proliferation that results in the lung attaining its shape.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000794"},{"relation_name":"positively_regulates","term_name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060501"}


id: PBO:0039243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member A3","termid":"PBO:0039243"}


id: GO:0031282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of guanylate cyclase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclase activity","termid":"GO:0031279"},{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of guanylate cyclase activity","termid":"GO:0031282"}


id: PBO:0028257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ornithine_carbamoyltransferase_activity","termid":"PBO:0028257"}


id: GO:0046814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a co-receptor on the host cell surface.","definition_xrefs":["ISBN:0879694971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion attachment to host cell","termid":"GO:0019062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coreceptor-mediated virion attachment to host cell","synonyms":[{"name":"virion attachment, binding of host cell surface coreceptor","type":"exact"}],"termid":"GO:0046814"}


id: PBO:0033786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_anaphase-promoting_complex-dependent_protein_catabolic_process","termid":"PBO:0033786"}


id: PBO:0081349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 160","termid":"PBO:0081349"}


id: GO:0032758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-9 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-9 production","termid":"GO:0032678"},{"relation_name":"positively_regulates","term_name":"interleukin-9 production","termid":"GO:0032638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-9 production","secondary_identifiers":["GO:0045419"],"synonyms":[{"name":"activation of interleukin-9 production","type":"narrow"},{"name":"positive regulation of IL-9 production","type":"exact"},{"name":"positive regulation of interleukin-9 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-9 production","type":"narrow"},{"name":"up regulation of interleukin-9 production","type":"exact"},{"name":"up-regulation of interleukin-9 production","type":"exact"},{"name":"upregulation of interleukin-9 production","type":"exact"}],"termid":"GO:0032758"}


id: PBO:0053704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 906","termid":"PBO:0053704"}


id: PBO:0045811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 1","termid":"PBO:0045811"}


id: GO:0034797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hydrogen (2R,3S)-3-methyloxiran-2-ylphosphonic acid + glutathione = hydrogen (1R,2R)-1-glutathio-2-hydroxypropylphosphonic acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete fosfomycin 2-glutathione ligase activity (obsolete GO:0034797)","termid":"GO:0034797"}


id: PBO:0090628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid9","termid":"PBO:0090628"}


id: GO:0031284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of guanylate cyclase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cyclase activity","termid":"GO:0031281"},{"relation_name":"is_a","term_name":"regulation of guanylate cyclase activity","termid":"GO:0031282"},{"relation_name":"is_a","term_name":"positive regulation of lyase activity","termid":"GO:0051349"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide biosynthetic process","termid":"GO:1900373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of guanylate cyclase activity","synonyms":[{"name":"activation of guanylate cyclase activity","type":"narrow"},{"name":"stimulation of guanylate cyclase activity","type":"narrow"},{"name":"up regulation of guanylate cyclase activity","type":"exact"},{"name":"up-regulation of guanylate cyclase activity","type":"exact"},{"name":"upregulation of guanylate cyclase activity","type":"exact"}],"termid":"GO:0031284"}


id: PBO:0000518
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.11.1","termid":"PBO:0000518"}


id: PBO:0016539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seipin homolog, involved in lipid catabolism (predicted)","termid":"PBO:0016539"}


id: PBO:0038454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoadipate-semialdehyde synthase","termid":"PBO:0038454"}


id: PBO:0070390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor tyrosine kinase like orphan receptor 1","termid":"PBO:0070390"}


id: GO:0106366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + guanosine = ADP + GMP.","definition_xrefs":["PMID:10879466","PMID:7665468","RHEA:27710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"guanosine kinase activity","secondary_identifiers":["EC:2.7.1.73"],"termid":"GO:0106366"}


id: SO:0000770
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The acceptor region of a two-piece tmRNA that when mature is charged at its 3' end with alanine. The tmRNA gene undergoes circular permutation in some groups of bacteria; processing of the transcripts from such a gene leaves the mature tmRNA in two pieces, base-paired together.","definition_xrefs":["Indiana:kw","doi:10.1093/nar/gkh795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tmRNA_region","termid":"SO:0000847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_acceptor_piece","synonyms":[{"name":"tmRNA acceptor piece","type":"exact"}],"termid":"SO:0000770"}


id: PBO:0001045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent protein Srb mediator subunit kinase Srb10","termid":"PBO:0001045"}


id: PBO:0042667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 1","termid":"PBO:0042667"}


id: PBO:0027959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_catalase_activity_during_cellular_response_to_nitrosative_stress","termid":"PBO:0027959"}


id: MOD:00953
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamic acid residue and an L-serine residue by an ester bond and releasing water to form O-(L-isoglutamyl)-L-serine.","definition_xrefs":["RESID:AA0597#ESX","DeltaMass:0","PubMed:19035375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"O-(L-isoglutamyl)-L-serine","termid":"MOD:01977"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-serine (Glu-Ser)","synonyms":[{"name":"(2S)-2-amino-5-[(2S)-2-amino-2-carboxyethoxy]-5-oxopentanoic acid","type":"exact"},{"name":"CROSSLNK isoglutamyl serine ester (Ser-Glu)","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)serine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-serine","type":"exact"},{"name":"O-gamma-Glutamyl- (Crosslink to Serine)","type":"exact"},{"name":"O3-(isoglutamyl)-serine","type":"exact"}],"termid":"MOD:00953"}


id: PBO:0084981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH diphosphatase (pyrophosphatase); hydrolyzes the pyrophosphate linkage in NADH and related nucleotides; localizes to peroxisomes; enzymatic component of one of several partly redundant surveillance pathways involved in decapping of non-canonical nicotinamide adenine dinucleotide (NAD) capped nuclear NAD-RNAs; also possesses deCoAping activity involved in the decapping of non-canonical dephospho-CoA capped RNA (dpCoA-RNA); nudix hydrolase family member","termid":"PBO:0084981"}


id: GO:1902771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of choline O-acetyltransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:mr","PMID:7576634","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of choline O-acetyltransferase activity (obsolete GO:1902771)","synonyms":[{"name":"activation of CHOACTase activity","type":"narrow"},{"name":"activation of acetyl-CoA:choline O-acetyltransferase activity","type":"narrow"},{"name":"activation of choline O-acetyltransferase activity","type":"narrow"},{"name":"activation of choline acetylase activity","type":"narrow"},{"name":"activation of choline acetyltransferase activity","type":"narrow"},{"name":"positive regulation of CHOACTase activity","type":"exact"},{"name":"positive regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"positive regulation of choline acetylase activity","type":"exact"},{"name":"positive regulation of choline acetyltransferase activity","type":"exact"},{"name":"up regulation of CHOACTase activity","type":"exact"},{"name":"up regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"up regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"up regulation of choline acetylase activity","type":"exact"},{"name":"up regulation of choline acetyltransferase activity","type":"exact"},{"name":"up-regulation of CHOACTase activity","type":"exact"},{"name":"up-regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"up-regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"up-regulation of choline acetylase activity","type":"exact"},{"name":"up-regulation of choline acetyltransferase activity","type":"exact"},{"name":"upregulation of CHOACTase activity","type":"exact"},{"name":"upregulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"upregulation of choline O-acetyltransferase activity","type":"exact"},{"name":"upregulation of choline acetylase activity","type":"exact"},{"name":"upregulation of choline acetyltransferase activity","type":"exact"}],"termid":"GO:1902771"}


id: PBO:0071340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 4","termid":"PBO:0071340"}


id: PBO:0079146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 8","termid":"PBO:0079146"}


id: PBO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 27","termid":"PBO:0062043"}


id: PBO:0087965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of the ATP-binding cassette (ABC) family; role in plasma membrane sterol incorporation; implicated in pleiotropic drug resistance; provides resistance to ethanol stress and contributes to a decreased intracellular accumulation of ethanol; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0087965"}


id: PR:O94654
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 35 member F5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03583","PANTHER:PTHR23051:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C405.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.03c","secondary_identifiers":["UniProtKB:O94654"],"synonyms":[{"name":"Spom972h-SLC35F5","type":"exact"}],"termid":"PR:O94654"}


id: GO:0047805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP = 3',5'-cyclic CMP + diphosphate + H+.","definition_xrefs":["RHEA:14737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0009975","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cytidylate cyclase activity","secondary_identifiers":["EC:4.6.1.6","MetaCyc:CYTIDYLATE-CYCLASE-RXN","KEGG_REACTION:R00574"],"synonyms":[{"name":"3',5'-cyclic-CMP synthase activity","type":"related"},{"name":"3'5'-cyclic-CMP synthase activity","type":"related"},{"name":"CTP diphosphate-lyase (cyclizing)","type":"related"},{"name":"CTP diphosphate-lyase (cyclizing; 3',5'-cyclic-CMP-forming)","type":"related"},{"name":"cytidyl cyclase activity","type":"related"},{"name":"cytidylyl cyclase activity","type":"related"}],"termid":"GO:0047805"}


id: GO:0016355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete DDT susceptibility/resistance (obsolete GO:0016355)","synonyms":[{"name":"DDT susceptibility/resistance","type":"exact"}],"termid":"GO:0016355"}


id: GO:0016828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid sulfur-sulfur bond.","definition_xrefs":["EC:3.12.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on acid sulfur-sulfur bonds","synonyms":[{"name":"hydrolase activity, acting on acid sulphur-sulphur bonds","type":"exact"}],"termid":"GO:0016828"}


id: PBO:0017819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein Hgh1","termid":"PBO:0017819"}


id: PBO:0027249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity","termid":"PBO:0027249"}


id: PBO:0088431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Rib1","termid":"PBO:0088431"}


id: GO:2000046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of G2 phase of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G2 phase of mitotic cell cycle (obsolete GO:2000046)","synonyms":[{"name":"regulation of G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:2000046"}


id: GO:0036245
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101343],"is_not":false,"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a menadione stimulus. Menadione (also called vitamin K3) is a naphthoquinone having a methyl substituent at the 2-position.","definition_xrefs":["GOC:al","Wikipedia:Menadione"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to vitamin K","termid":"GO:0071307"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to menadione","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to vitamin K3","type":"exact"}],"termid":"GO:0036245","terms_by_termid":{"GO:0036245":null}}


id: GO:0048926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the electrosensory lateral line system over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"electrosensory lateral line system development","termid":"GO:0048926"}


id: PBO:0083786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in ribosome biogenesis; putative ATP-dependent RNA helicase of the DEAD-box protein family; human homolog DDX51 complements yeast dbp6 mutant","termid":"PBO:0083786"}


id: GO:0009576
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a leucoplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"leucoplast","termid":"GO:0009516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"leucoplast stroma","termid":"GO:0009576"}


id: PBO:0061722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2G","termid":"PBO:0061722"}


id: GO:0071848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any TNFSF11-mediated signaling process that increases the rate, frequency, or extent of the ERK1 and ERK2 cascade.","definition_xrefs":["GOC:BHF","PMID:18606301"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signaling (obsolete GO:0071848)","synonyms":[{"name":"positive regulation of ERK1 and ERK2 cascade via RANKL-mediated signaling","type":"exact"},{"name":"positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signalling","type":"exact"}],"termid":"GO:0071848"}


id: PBO:0045678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein 2 intermediate chain 2","termid":"PBO:0045678"}


id: PBO:0056906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitoguardin 1","termid":"PBO:0056906"}


id: GO:0071879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the adenylate cyclase-activating adrenergic receptor protein signaling pathway. An adrenergic receptor signaling pathway is the series of molecular signals generated as a consequence of an adrenergic receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"positively_regulates","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase-activating adrenergic receptor signaling pathway","synonyms":[{"name":"positive regulation of adrenergic receptor signaling pathway","type":"broad"},{"name":"positive regulation of adrenergic receptor signalling pathway","type":"exact"}],"termid":"GO:0071879"}


id: GO:0106277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bilirubin IXalpha + NADP+ = biliverdin IXalpha + NADPH + H+.","definition_xrefs":["RHEA:15793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliverdin reductase [NAD(P)+] activity","termid":"GO:0004074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"biliverdin reductase (NADP+) activity","termid":"GO:0106277"}


id: FYECO:0000117
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115713],"is_not":false,"summary":null,"term":"FYECO:0000117"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Cells are initially grown at a normal growth temperature. This is followed by a heat shock where the temperature is increased to a very high temperature followed by recovery at the initial temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping heat shock","termid":"FYECO:0000116"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"is_obsolete":false,"name":"heat shock and recovery at normal temperature","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"heat shock for 20-30 min at 48 degrees C, preceeded and followed by growth at normal temperature","type":"narrow"}],"termid":"FYECO:0000117","terms_by_termid":{"FYECO:0000117":null}}


id: GO:0050536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylphenylethylamine + H2O = acetate + phenylethylamine.","definition_xrefs":["RHEA:23952","EC:3.5.1.85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S)-N-acetyl-1-phenylethylamine hydrolase activity","secondary_identifiers":["KEGG_REACTION:R07301","MetaCyc:3.5.1.85-RXN"],"synonyms":[{"name":"(S)-N-acetyl-1-phenylethylamine amidohydrolase activity","type":"related"},{"name":"(S)-N-acetylphenylethylamine:H2O hydrolase activity","type":"related"}],"termid":"GO:0050536"}


id: GO:0034060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a cyanelle.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle stroma","termid":"GO:0034060"}


id: PBO:0034499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere_assembly","termid":"PBO:0034499"}


id: PBO:0052195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMB3 pseudogene 1","termid":"PBO:0052195"}


id: GO:0033461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GGU codon-amino acid adaptor activity","synonyms":[{"name":"GGT codon-amino acid adaptor activity","type":"exact"},{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033461"}


id: PBO:0114344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS superfamily, UNC-93 subfamily, transmembrane transporter","termid":"PBO:0114344"}


id: PBO:0066849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 149","termid":"PBO:0066849"}


id: PBO:0027720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_acetylation","termid":"PBO:0027720"}


id: GO:1903412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bile acid stimulus.","definition_xrefs":["GOC:rl","PMID:21757002","GOC:BHF","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bile acid","termid":"GO:1903412"}


id: PATO:0001747
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation exposure quality inhering in an organ by virtue of the multiplication of an equivalent dose to that organ multiplied by the tissue weighting factor for that organ.","definition_xrefs":["arpansa:arpansa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation exposure","termid":"PATO:0001744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation effective dose","termid":"PATO:0001747"}


id: PBO:0002079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5 (predicted)","termid":"PBO:0002079"}


id: GO:0052701
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107692,107693,99745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[107694,99746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving compounds derived from histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular modified histidine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular histidine derivative metabolic process","type":"exact"},{"name":"cellular histidine derivative metabolism","type":"exact"},{"name":"cellular modified histidine metabolism","type":"exact"},{"name":"histidine derivative metabolic process","type":"exact"},{"name":"modified histidine metabolic process","type":"exact"},{"name":"modified histidine metabolism","type":"exact"}],"termid":"GO:0052701","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: GO:0017146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD.","definition_xrefs":["PMID:8294079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor complex","termid":"GO:0008328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NMDA selective glutamate receptor complex","synonyms":[{"name":"N-methyl-D-aspartate selective glutamate receptor complex","type":"exact"},{"name":"NMDA-selective glutamate receptor","type":"exact"}],"termid":"GO:0017146"}


id: PBO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.33","termid":"PBO:0001669"}


id: PR:O14113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sde2 gene.","definition_xrefs":["UniProtKB:O14113","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere maintenance protein SDE2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.18c","synonyms":[{"name":"Spom972h-sde2","type":"exact"},{"name":"silencing defective protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14113"}


id: PBO:0056414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF10 divergent transcript","termid":"PBO:0056414"}


id: GO:1903663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-altrarate.","definition_xrefs":["GO_REF:0000068","PMID:17649980","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"aldaric acid catabolic process","termid":"GO:0019579"},{"relation_name":"is_a","term_name":"L-altrarate metabolic process","termid":"GO:1903662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044248","GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-altrarate catabolic process","synonyms":[{"name":"L-altrarate(1-) breakdown","type":"exact"},{"name":"L-altrarate(1-) catabolism","type":"exact"},{"name":"L-altrarate(1-) degradation","type":"exact"}],"termid":"GO:1903663"}


id: PR:O13759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csx1 gene.","definition_xrefs":["UniProtKB:O13759","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding post-transcriptional regulator csx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.09c","synonyms":[{"name":"Spom972h-csx1","type":"exact"}],"termid":"PR:O13759"}


id: GO:0075155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont transmembrane receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transmembrane receptor-mediated signal transduction in response to host (obsolete GO:0075155)","synonyms":[{"name":"negative regulation of symbiont transmembrane receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075155"}


id: GO:0080053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylalanine stimulus.","definition_xrefs":["PMID:15889294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phenylalanine","termid":"GO:0080053"}


id: PBO:0030958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_outer_repeat","termid":"PBO:0030958"}


id: PBO:0058665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6793","termid":"PBO:0058665"}


id: PBO:0027600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_actomyosin_contractile_ring_contraction","termid":"PBO:0027600"}


id: GO:0003861
data:
  {"annotated_genes":["SJAG_03243"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96917],"is_not":false,"summary":null,"term":"GO:0003861"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-3-isopropylmalate = (2S)-2-isopropylmalate.","definition_xrefs":["EC:4.2.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-isopropylmalate dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3-ISOPROPYLMALISOM-RXN","RHEA:32287"],"synonyms":[{"name":"(2R,3S)-3-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)","type":"related"},{"name":"(2R,3S)-3-isopropylmalate hydro-lyase activity","type":"related"},{"name":"alpha-IPM isomerase activity","type":"related"},{"name":"alpha-isopropylmalate isomerase activity","type":"related"},{"name":"beta-isopropylmalate dehydratase activity","type":"related"},{"name":"isopropylmalate isomerase activity","type":"related"}],"termid":"GO:0003861","terms_by_termid":{"GO:0003861":null}}


id: PBO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd1","termid":"PBO:0002564"}


id: GO:0098897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the spine apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"spine apparatus","termid":"GO:0097444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spine apparatus membrane","termid":"GO:0098897"}


id: GO:0043577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism, or part of an organism, in response to an external chemical gradient, usually toward or away from it.","definition_xrefs":["GOC:jl","PMID:10087613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotropism","secondary_identifiers":["Wikipedia:Chemotropism"],"termid":"GO:0043577"}


id: FYPO:0003909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is greater than normal at promoters containing CRE sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:25122751","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning at stress response genes","termid":"FYPO:0003812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"increased nucleosome occupancy at CRE site","synonyms":[{"name":"increased nucleosome occupancy at CRE site during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at CRE site during vegetative growth","type":"exact"}],"termid":"FYPO:0003909"}


id: GO:0097554
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It originates at the left anterior basal body, extends laterally through the cytoplasm, crosses the right anterior axoneme, and exits as a membrane-bound flagellum on the anterior left side of the cell.","definition_xrefs":["PMID:16607022","GOC:giardia","ISBN:9780124260207","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left anterior flagellum","synonyms":[{"name":"left anterior cilium","type":"exact"}],"termid":"GO:0097554"}


id: SO:0001517
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a region of a chromosome is changed to the reverse order without duplication or deletion.","direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_attribute","synonyms":[{"name":"inversion attribute","type":"exact"}],"termid":"SO:0001517"}


id: PBO:0048794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha o1","termid":"PBO:0048794"}


id: GO:0016829
data:
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id: PBO:0057210
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id: PBO:0064961
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id: GO:0098545
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id: PBO:0082044
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id: PBO:0077077
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id: PBO:0079799
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id: PATO:0001603
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id: PBO:0004331
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id: PR:Q9UT49
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id: PBO:0050396
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id: PBO:0043180
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id: PBO:0057262
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id: PR:O14345
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id: GO:0034205
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id: PBO:0028889
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id: PBO:0087547
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id: PBO:0050059
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id: GO:1990859
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id: PBO:0057211
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id: PBO:0063149
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id: GO:0061534
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id: PBO:0060532
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id: PBO:0073339
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id: GO:0106289
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id: FYPO:0004784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"},{"relation_name":"is_a","term_name":"decreased protein methyltransferase activity","termid":"FYPO:0005725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased histone methyltransferase activity","synonyms":[{"name":"reduced histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0004784"}


id: GO:0021902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neuronal precursor cells to become specialized types of neurons in the forebrain.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","PMID:16226447","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron fate commitment","termid":"GO:0021877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"commitment of neuronal cell to specific neuron type in forebrain","termid":"GO:0021902"}


id: PBO:0062101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily B member 1","termid":"PBO:0062101"}


id: GO:0099525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of molecules (e.g. neuropeptides and neuromodulators such as serotonin and dopamine) contained within a membrane-bounced dense in response to increased presynaptic cytosolic calcium levels.","definition_xrefs":["PMID:17553987","PMID:24653208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"},{"relation_name":"is_a","term_name":"neuronal dense core vesicle exocytosis","termid":"GO:0099011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"presynaptic dense core vesicle exocytosis","termid":"GO:0099525"}


id: GO:1903126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of centriole-centriole cohesion.","definition_xrefs":["GOC:als","PMID:24554434","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"},{"relation_name":"negatively_regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000226","GO:0007049","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"negative regulation of centriole-centriole cohesion","synonyms":[{"name":"down regulation of centriole-centriole cohesion","type":"exact"},{"name":"down-regulation of centriole-centriole cohesion","type":"exact"},{"name":"downregulation of centriole-centriole cohesion","type":"exact"},{"name":"inhibition of centriole-centriole cohesion","type":"narrow"}],"termid":"GO:1903126"}


id: GO:0003725
data:
  {"annotated_genes":["SJAG_03689","SJAG_02156","SJAG_04369","SJAG_04019","SJAG_04410","SJAG_01643","SJAG_04527","SJAG_04700"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60954,98276,103443,104631,105985,111861,112169,114802],"is_not":false,"summary":null,"term":"GO:0003725"}]},"cv_name":"molecular_function","definition":"Binding to double-stranded RNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01643":null,"SJAG_02156":null,"SJAG_03689":null,"SJAG_04019":null,"SJAG_04369":null,"SJAG_04410":null,"SJAG_04527":null,"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"double-stranded RNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"dsRNA binding","type":"exact"}],"termid":"GO:0003725","terms_by_termid":{"GO:0003725":null}}


id: PBO:0072594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radical S-adenosyl methionine domain containing 1","termid":"PBO:0072594"}


id: FYPO:0007427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of the old spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the nucleus. The old SPB may be transiently inserted into the nuclear envelope but does not remain in place as normal.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:19487457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","termid":"FYPO:0003568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal old mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","synonyms":[{"name":"abnormal establishment of old mitotic spindle pole body localization to nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal old mitotic SPB insertion into nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal old mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal old mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0007427"}


id: PBO:0090570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho7","termid":"PBO:0090570"}


id: PBO:0050436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein L like","termid":"PBO:0050436"}


id: PBO:0034205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_model_of","termid":"PBO:0034205"}


id: GO:0140031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon phosphorylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"phosphorylation-dependent protein binding","termid":"GO:0140031"}


id: PATO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's exhibiting no deviation from normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"normal","synonyms":[{"name":"average","type":"related"}],"termid":"PATO:0000461"}


id: PBO:0085069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-functional protein with homology IMP dehydrogenase; YAR073W/IMD1 and YAR075W comprise a continuous reading frame in most strains of S. cerevisiae; YAR073W/YAR075W together have a paralog, IMD2, that arose from a segmental duplication","termid":"PBO:0085069"}


id: FYPO:0000682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a molecular function is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal regulation of molecular function","synonyms":[{"name":"abnormal regulation of molecular function during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of molecular function during vegetative growth","type":"exact"}],"termid":"FYPO:0000682"}


id: PBO:0002798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal transforming acidic coiled-coil (TACC) protein ortholog Alp7","termid":"PBO:0002798"}


id: MOD:01975
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(poly-3-hydroxybutyrate)-L-cysteine.","definition_xrefs":["PubMed:19711985","PubMed:9888824","RESID:AA0617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-poly(3-hydroxybutyrate)-L-cysteine","synonyms":[{"name":"(alpha)-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-(omega)-[(3R)-3-hydroxybutanoyl]-poly([(3R)-3-methyl-1-oxopropane-1,3-diyl]oxy)","type":"exact"},{"name":"MOD_RES S-poly(beta-hydroxybutyryl)lysine","type":"exact"},{"name":"S-poly(3-hydroxybutanoate)cysteine","type":"exact"},{"name":"S-poly(3-hydroxybutanoic acid)cysteine","type":"exact"},{"name":"S-poly(3-hydroxybutyrate)-L-cysteine","type":"exact"},{"name":"S-poly(3-hydroxybutyrate)cysteine","type":"exact"},{"name":"S-poly(3-hydroxybutyric acid)cysteine","type":"exact"},{"name":"S-poly(beta-hydroxybutyrate)cysteine","type":"exact"},{"name":"S-poly[(R)-3-hydroxybutyrate]cysteine","type":"exact"}],"termid":"MOD:01975"}


id: GO:1905459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:26493107","GOC:TermGenie","GOC:rph","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell apoptotic process","termid":"GO:0034391"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell apoptotic process","termid":"GO:1905288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"regulation of VSMC apoptosis","type":"narrow"},{"name":"regulation of VSMC apoptotic process","type":"exact"},{"name":"regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"regulation of vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905459"}


id: SO:0000578
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a small nucleolar RNA (snoRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA_encoding","synonyms":[{"name":"snoRNA encoding","type":"exact"}],"termid":"SO:0000578"}


id: PBO:0086760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; regulated by the metal-responsive Aft1p transcription factor; highly inducible in zinc-depleted conditions; localizes to the soluble fraction; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; YOR387C has a paralog, VEL1, that arose from a single-locus duplication","termid":"PBO:0086760"}


id: PR:P87130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim17-A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.16c","secondary_identifiers":["UniProtKB:P87130"],"synonyms":[{"name":"SPAC3A12.16c","type":"related"},{"name":"Spom972h-TIMM17A","type":"exact"},{"name":"mitochondrial protein import protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87130"}


id: PBO:0047002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A5, pseudogene","termid":"PBO:0047002"}


id: FYPO:0006196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal and have abnormal orientation. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:11432827"],"direct_ancestors":[{"relation_name":"has_part","term_name":"misoriented interphase microtubules","termid":"FYPO:0003328"},{"relation_name":"has_part","term_name":"short interphase microtubules","termid":"FYPO:0006103"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"short misoriented interphase microtubules","synonyms":[{"name":"short misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"short misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"short misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006196"}


id: PBO:0084528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the lipid-translocating exporter (LTE) family; present in multiple copies associated with SUC telomeric loci, amplified in yeasts used for industrial biomass or ethanol production with molasses as substrate","termid":"PBO:0084528"}


id: PBO:0038825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 32","termid":"PBO:0038825"}


id: PBO:0076597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 19","termid":"PBO:0076597"}


id: GO:0070834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with two N-methylations with phospho-base phosphoethanolamine and phospho-N-methylethanolamine, followed by a downstream N-methylation on phosphatidyl-base phosphatidyl-N-dimethylethanolamine; the process ends with the conversion of a phosphatidyl-N-dimethylethanolamine to a phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY4FS-4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via N-dimethylethanolamine phosphate and CDP-N-dimethylethanolamine","termid":"GO:0070834"}


id: PBO:0015261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin peroxidase Pmp20","termid":"PBO:0015261"}


id: GO:0090146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of mitochondria to the correct region of the cell that contributes to the process of mitochondrial fission.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of mitochondrion localization involved in mitochondrial fission (obsolete GO:0090146)","synonyms":[{"name":"establishment of mitochondrion localisation involved in mitochondrial fission","type":"exact"},{"name":"mitochondrial localization involved in mitochondrial fission","type":"related"}],"termid":"GO:0090146"}


id: GO:0018978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane (DDT), a chlorinated, broad spectrum, contact insecticide, in the absence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolic process","termid":"GO:0018977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"anaerobic 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolic process","secondary_identifiers":["UM-BBD_pathwayID:ddt2"],"synonyms":[{"name":"anaerobic 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolism","type":"exact"},{"name":"anaerobic DDT metabolic process","type":"exact"},{"name":"anaerobic DDT metabolism","type":"exact"}],"termid":"GO:0018978"}


id: PBO:0029914
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_GGPP_level","termid":"PBO:0029914"}


id: PR:Q9Y7R1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC2H8.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7R1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2H8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC2H8.04","synonyms":[{"name":"Spom972h-SPCC2H8.04","type":"exact"}],"termid":"PR:Q9Y7R1"}


id: GO:0051486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate pathway that contributes to terpenoid biosynthesis. This pathway converts acetate, in the form of acetyl-CoA, to isopentenyl diphosphate (IPP) through a series of mevalonate intermediates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:0019287"},{"relation_name":"part_of","term_name":"terpenoid biosynthetic process, mevalonate-dependent","termid":"GO:0051485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway involved in terpenoid biosynthetic process","synonyms":[{"name":"isopentenyl diphosphate anabolism, mevalonate pathway, during terpenoid anabolism","type":"related"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway, during terpenoid biosynthetic process","type":"related"},{"name":"isopentenyl diphosphate formation, mevalonate pathway, during terpenoid biosynthesis","type":"related"},{"name":"isopentenyl diphosphate formation, mevalonate pathway, during terpenoid formation","type":"related"},{"name":"isopentenyl diphosphate synthesis, mevalonate pathway, during terpenoid synthesis","type":"related"}],"termid":"GO:0051486"}


id: GO:0004645
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + phosphate = 1,4-alpha-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate.","definition_xrefs":["RHEA:41732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"1,4-alpha-oligoglucan phosphorylase activity","secondary_identifiers":["EC:2.4.1.1","MetaCyc:RXN0-5184"],"synonyms":[{"name":"glucosan phosphorylase","type":"narrow"},{"name":"granulose phosphorylase","type":"narrow"},{"name":"muscle phosphorylase","type":"narrow"},{"name":"1,4-alpha-D-glucan:phosphate alpha-D-glucosyltransferase activity","type":"related"},{"name":"1,4-alpha-glucan phosphorylase activity","type":"related"},{"name":"alpha-glucan phosphorylase","type":"broad"},{"name":"amylopectin phosphorylase","type":"narrow"},{"name":"amylophosphorylase activity","type":"narrow"},{"name":"glucan phosphorylase","type":"narrow"},{"name":"muscle phosphorylase a and b activity","type":"narrow"},{"name":"myophosphorylase","type":"narrow"},{"name":"polyphosphorylase activity","type":"related"},{"name":"potato phosphorylase","type":"narrow"},{"name":"starch phosphorylase","type":"narrow"}],"termid":"GO:0004645"}


id: GO:0100043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular response to alkaline pH.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to alkaline pH by transcription from RNA polymerase II promoter (obsolete GO:0100043)","termid":"GO:0100043"}


id: FYPO:0006908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type) in the cell cycle following spore germination. A mitotic cell size control checkpoint normally prevents cell cycle progression from G1 to S phase until the cell reaches a certain size.","definition_xrefs":["GO:0031568","PomBase:mah","PMID:872890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G1 cell size control checkpoint","termid":"FYPO:0006905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic G1 cell size control checkpoint following spore germination","synonyms":[{"name":"normal G1 cell size control checkpoint following spore germination during mitotic cell cycle","type":"related"},{"name":"normal mitotic G1 cell size control checkpoint activation following spore germination","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint following spore germination during vegetative growth","type":"exact"}],"termid":"FYPO:0006908"}


id: PBO:0034153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_deep_homology_relationship_with","termid":"PBO:0034153"}


id: PBO:0086043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in multidrug resistance; inhibits oxidative damage induced by amphotericin B; overexpression increases flocculation, biofilm formation, invasive and pseudohyphal growth; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; null mutant displays increased translation rate and increased readthrough of premature stop codons; BSC2 has a paralog, IRC23, that arose from the whole genome duplication","termid":"PBO:0086043"}


id: PBO:0029805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_and_cells_with_abnormal_shape_(obsolete_FYPO:0002432)","termid":"PBO:0029805"}


id: PBO:0079302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 1","termid":"PBO:0079302"}


id: GO:0007624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific actions or reactions of an organism that recur with a regularity more frequent than every 24 hours.","definition_xrefs":["PMID:19708721","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic process","termid":"GO:0048511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ultradian rhythm","termid":"GO:0007624"}


id: PBO:0089604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in ribosomal large subunit assembly and maintenance","termid":"PBO:0089604"}


id: PBO:0067750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 49","termid":"PBO:0067750"}


id: PBO:0027319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0027319"}


id: GO:0047307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2,4-diaminobutyrate + pyruvate = L-alanine + L-aspartate 4-semialdehyde.","definition_xrefs":["RHEA:12380","EC:2.6.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"diaminobutyrate-pyruvate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.46-RXN","KEGG_REACTION:R02293"],"synonyms":[{"name":"L-2,4-diaminobutanoate:pyruvate aminotransferase activity","type":"related"},{"name":"L-diaminobutyric acid transaminase activity","type":"related"},{"name":"diaminobutyrate--pyruvate aminotransferase activity","type":"related"},{"name":"diaminobutyrate-pyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047307"}


id: PBO:0063699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase 2","termid":"PBO:0063699"}


id: PBO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor-like Chr3 (predicted)","termid":"PBO:0000211"}


id: PBO:0042697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 3A","termid":"PBO:0042697"}


id: GO:0047149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homocysteine + dimethylsulfonioacetate = (methylthio)acetate + L-methionine + H+.","definition_xrefs":["RHEA:22788","EC:2.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"thetin-homocysteine S-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.3-RXN","KEGG_REACTION:R04153"],"synonyms":[{"name":"dimethylsulfonioacetate:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"dimethylthetin-homocysteine methyltransferase activity","type":"related"},{"name":"thetin-homocysteine methylpherase activity","type":"related"}],"termid":"GO:0047149"}


id: PBO:0028086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nuclear_body","termid":"PBO:0028086"}


id: PBO:0001299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom22 (predicted)","termid":"PBO:0001299"}


id: PBO:0038280
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"first_approved_timestamp","termid":"PBO:0038280"}


id: GO:2000693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of seed maturation","termid":"GO:2000034"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed maturation","termid":"GO:2000693"}


id: GO:0045346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"MHC class II biosynthetic process","termid":"GO:0045342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of MHC class II biosynthetic process","synonyms":[{"name":"regulation of MHC class II anabolism","type":"exact"},{"name":"regulation of MHC class II biosynthesis","type":"exact"},{"name":"regulation of MHC class II formation","type":"exact"},{"name":"regulation of MHC class II synthesis","type":"exact"},{"name":"regulation of major histocompatibility complex class II biosynthesis","type":"exact"},{"name":"regulation of major histocompatibility complex class II biosynthetic process","type":"exact"}],"termid":"GO:0045346"}


id: PBO:0002892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cds1/Rad53/Chk2 family protein kinase Mek1","termid":"PBO:0002892"}


id: GO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with macrophage colony-stimulating factor (M-CSF) receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0004672","GO:0038023","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"macrophage colony-stimulating factor receptor activity","secondary_identifiers":["EC:2.7.10.1"],"synonyms":[{"name":"CSF-1","type":"narrow"},{"name":"Fms","type":"narrow"},{"name":"M-CSF receptor activity","type":"exact"},{"name":"macrophage colony stimulating factor receptor activity","type":"exact"}],"termid":"GO:0005011"}


id: PBO:0030620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alpha-glucosidase_activity","termid":"PBO:0030620"}


id: PBO:0078813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA nucleotidyl transferase 1","termid":"PBO:0078813"}


id: PBO:0086974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of protein phosphatase PP4; presence of Psy4p in the PP4 complex (along with catalytic subunit Pph3p and Psy2p) is required for dephosphorylation of the histone variant H2AX, but not for dephosphorylation of Rad53p, during recovery from the DNA damage checkpoint; localization is cell-cycle dependent and regulated by Cdc28p phosphorylation; required for cisplatin resistance; homolog of mammalian R2","termid":"PBO:0086974"}


id: PBO:0069952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1245, pseudogene","termid":"PBO:0069952"}


id: GO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glandular epithelial cell over time, from its formation to the mature structure. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell development","termid":"GO:0002066"},{"relation_name":"part_of","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glandular epithelial cell development","termid":"GO:0002068"}


id: GO:0044599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An AP-type membrane coat adaptor complex that in humans consists of beta5, zeta, mu5 and sigma5 subunits and is found associated with membranes in the endosomes; it is not clear whether AP-5 forms clathrin coats in vivo.","definition_xrefs":["PMID:22022230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"AP-5 adaptor complex","synonyms":[{"name":"adaptor protein-5 adaptor complex","type":"exact"}],"termid":"GO:0044599"}


id: GO:0002199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex comprising the chaperonin-containing T-complex and several other components involved in mediating sperm-oocyte Interaction.","definition_xrefs":["PMID:21880732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"zona pellucida receptor complex","synonyms":[{"name":"sperm protein complex I","type":"related"}],"termid":"GO:0002199"}


id: FYPO:0001140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of leucine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal leucine import","termid":"FYPO:0001139"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased leucine import","synonyms":[{"name":"decreased L-leucine import","type":"exact"},{"name":"decreased L-leucine import across plasma membrane","type":"exact"},{"name":"decreased leucine import during mitotic cell cycle","type":"related"},{"name":"decreased leucine import during vegetative growth","type":"exact"},{"name":"decreased leucine import into cell","type":"exact"},{"name":"decreased leucine uptake","type":"exact"},{"name":"reduced leucine import","type":"exact"}],"termid":"FYPO:0001140"}


id: GO:0102789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cyanidin = H+ + cyanidin 5-O-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-D-glucose:cyanidin 5-O-beta-D-glucosyltransferase activity (obsolete GO:0102789)","termid":"GO:0102789"}


id: PBO:0064524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit D pseudogene 1","termid":"PBO:0064524"}


id: PBO:0045812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 2","termid":"PBO:0045812"}


id: GO:0051642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a centrosome is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center localization","termid":"GO:0061842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"centrosome localization","synonyms":[{"name":"centrosome localisation","type":"exact"},{"name":"establishment and maintenance of centrosome localization","type":"exact"}],"termid":"GO:0051642"}


id: GO:2000642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of early endosome to late endosome transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of early endosome to late endosome transport","termid":"GO:2000641"},{"relation_name":"negatively_regulates","term_name":"early endosome to late endosome transport","termid":"GO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of early endosome to late endosome transport","termid":"GO:2000642"}


id: GO:0042644
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a chloroplast to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid nucleoid","termid":"GO:0042646"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast nucleoid","termid":"GO:0042644"}


id: PBO:0083864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fatty-acyl coenzyme A oxidase; involved in the fatty acid beta-oxidation pathway; localized to the peroxisomal matrix; component of a light sensing pathway, converting light into a hydrogen peroxide signal, modulating nucleo-cytoplasmic shuttling of stress-responsive transcription factor, Msn2p","termid":"PBO:0083864"}


id: PBO:0065211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripherin","termid":"PBO:0065211"}


id: PBO:0026720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3_localization_to_chromatin_at_protein_coding_gene","termid":"PBO:0026720"}


id: POMBASE_GENE_EX_REL:directly_localizes
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"_global:has_input"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_localizes","termid":"POMBASE_GENE_EX_REL:directly_localizes"}


id: PBO:0065251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20D","termid":"PBO:0065251"}


id: PBO:0061581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal Xaa-Pro-Lys N-methyltransferase 2","termid":"PBO:0061581"}


id: GO:0005563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transfer RNA (obsolete GO:0005563)","synonyms":[{"name":"transfer RNA","type":"exact"}],"termid":"GO:0005563"}


id: PBO:0043593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXIII alpha 1 chain","termid":"PBO:0043593"}


id: PBO:0067075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 106, pseudogene","termid":"PBO:0067075"}


id: PBO:0029153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cumene_hydroperoxide","termid":"PBO:0029153"}


id: PBO:0057719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-4","termid":"PBO:0057719"}


id: PBO:0002290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm6 (predicted)","termid":"PBO:0002290"}


id: PATO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape that is almost an ellipse.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subelliptical","termid":"PATO:0005004"}


id: PBO:0067013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 22, pseudogene","termid":"PBO:0067013"}


id: FYPO:0007141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an endodeoxyribonuclease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endodeoxyribonuclease activity","termid":"FYPO:0002036"},{"relation_name":"is_a","term_name":"abolished nuclease activity","termid":"FYPO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abolished endodeoxyribonuclease activity","synonyms":[{"name":"endodeoxyribonuclease activity abolished","type":"exact"}],"termid":"FYPO:0007141"}


id: PBO:0086371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl alcohol dehydrogenase; similar to Phanerochaete chrysosporium aryl alcohol dehydrogenase; ORFs AAD6/YFL056C and AAD16/YFL057C are displaced from one another by -1 frameshift; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086371"}


id: PBO:0067825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 127","termid":"PBO:0067825"}


id: GO:0061032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the visceral serous pericardium from its formation to the mature structure. The visceral serous pericardium is the inner layer of the pericardium.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pericardium development","termid":"GO:0060039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visceral serous pericardium development","synonyms":[{"name":"epicardium development","type":"exact"}],"termid":"GO:0061032"}


id: PBO:0085138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for maturation of 18S rRNA; required for survival upon exposure to K1 killer toxin","termid":"PBO:0085138"}


id: PBO:0086498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative plasma membrane permease; proposed to be involved in carboxylic acid uptake and repressed by thiamine; substrate of Dbf2p/Mob1p kinase; transcription is altered if mitochondrial dysfunction occurs","termid":"PBO:0086498"}


id: GO:0030939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a photoperiod, an intermittent cycle of light (day) and dark (night) photoperiod regimes, with the light phase being longer than the dark.","definition_xrefs":["GOC:pj"],"gene_count":0,"genotype_count":0,"name":"obsolete response to long-day photoperiod (obsolete GO:0030939)","synonyms":[{"name":"response to long-day photoperiod","type":"exact"}],"termid":"GO:0030939"}


id: GO:0016126
data:
  {"annotated_genes":["SJAG_04865","SJAG_03598","SJAG_00413","SJAG_03249","SJAG_01307","SJAG_03024","SJAG_02982","SJAG_03235","SJAG_02044","SJAG_00770","SJAG_04499","SJAG_04217","SJAG_04018","SJAG_00370","SJAG_03509","SJAG_00453","SJAG_00624","SJAG_00717","SJAG_00235","SJAG_03715","SJAG_02104","SJAG_01474","SJAG_04810","SJAG_03018","SJAG_04270","SJAG_03929","SJAG_02719","SJAG_03531","SJAG_02855","SJAG_03750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84767,88569,105383,100816,107458,84510,87515,107965,114959,103847,112727,92657,111069,100390,85692,94116,100579,106230,84731,94933,102646,103666,103981,90682,88622,111405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[89924],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[105993],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[105994],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[84599,101962,84598],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-2541"],"synonyms":[{"name":"sterol anabolism","type":"exact"},{"name":"sterol biosynthesis","type":"exact"},{"name":"sterol formation","type":"exact"},{"name":"sterol synthesis","type":"exact"}],"termid":"GO:0016126","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: GO:0035447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol-2-(L-cysteinylamido)-2-deoxy-alpha-D-glucopyranoside + acetyl-CoA = mycothiol + coA + H+. Mycothiol is also known as AcCys-GlcN-Ins and 1-D-myo-inosityl-2-L-cysteinylamido-2-deoxy-alpha-D-glucopyranoside as Cys-GlcN-Ins or desacetylmycothiol.","definition_xrefs":["EC:2.3.1.189","PMID:12033919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"mycothiol synthase activity","secondary_identifiers":["RHEA:26172","MetaCyc:RXN1G-4"],"synonyms":[{"name":"acetyl-CoA:Cys-GlcN-Ins acetyltransferase","type":"exact"}],"termid":"GO:0035447"}


id: PBO:0085691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of phospholipid metabolism; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect the ER and plasma membrane (PM); regulates PM PI4P levels by controlling access of the Sac1p phosphatase to its substrate, PI4P; human VAP homolog; similar to D. melanogaster inturned protein; SWAT-GFP and mCherry fusion proteins localize to the cytosol; SCS22 has a paralog, SCS2, that arose from the whole genome duplication","termid":"PBO:0085691"}


id: GO:0035859
data:
  {"annotated_genes":["SJAG_01184","SJAG_04496","SJAG_03907","SJAG_02424","SJAG_00824","SJAG_00209","SJAG_02765","SJAG_00561"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84053],"is_not":false,"summary":null,"term":"GO:0035859"},{"annotations":[84051,90215,107103,103532],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990130"},{"annotations":[84347,84052,85445,94081,102687],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061700"}]},"cv_name":"cellular_component","definition":"A GTPase-activating protein (GAP) complex that regulates TORC1 signaling by interacting with the Rag GTPase. In S. cerevisiae the complex contains Seh1p, Sec13p, Npr2p, Npr3p, Iml1p, Mtc5p, Rtc1p, and Sea4p.","definition_xrefs":["GOC:jh","PMID:21454883","PMID:23974112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00209":null,"SJAG_00561":null,"SJAG_00824":null,"SJAG_01184":null,"SJAG_02424":null,"SJAG_02765":null,"SJAG_03907":null,"SJAG_04496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Seh1-associated complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GATOR complex","type":"exact"},{"name":"SEA complex","type":"exact"}],"termid":"GO:0035859","terms_by_termid":{"GO:0035859":null,"GO:0061700":null,"GO:1990130":null}}


id: PATO:0000931
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000931 blue light sensitivity (obsolete PATO:0000931)","termid":"PATO:0000931"}


id: PBO:0034169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_ends_during","termid":"PBO:0034169"}


id: PBO:0078374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalase pseudogene 1","termid":"PBO:0078374"}


id: PBO:0113285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly (A)+ RNA-binding protein; abundant mRNP-component protein that binds cell wall mRNAs; required for stability of many mRNAs; component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; implicated in regulation of translation; carries Q/N-rich domain at C- terminus, identified as candidate prion; ribosome-bound Pub1p modulates stop codon decoding during translation termination","termid":"PBO:0113285"}


id: GO:0015429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal fatty acyl transporter (obsolete GO:0015429)","synonyms":[{"name":"peroxisomal fatty acyl transporter","type":"exact"}],"termid":"GO:0015429"}


id: PBO:0063239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 4","termid":"PBO:0063239"}


id: PBO:0060214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate kinase","termid":"PBO:0060214"}


id: PBO:0027681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_transcription","termid":"PBO:0027681"}


id: PBO:0076329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptophysin like 2","termid":"PBO:0076329"}


id: FYPO:0003329
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to cell tip during mitotic interphase","synonyms":[{"name":"abolished protein localisation to cell tip during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cell end during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cell tip during mitotic interphase during vegetative growth","type":"exact"},{"name":"protein localization to cell tip abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0003329"}


id: GO:1903979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microglial cell activation.","definition_xrefs":["GOC:nc","GOC:BHF","GO_REF:0000058","PMID:19100238","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macrophage activation","termid":"GO:0043031"},{"relation_name":"is_a","term_name":"negative regulation of neuroinflammatory response","termid":"GO:0150079"},{"relation_name":"is_a","term_name":"regulation of microglial cell activation","termid":"GO:1903978"},{"relation_name":"negatively_regulates","term_name":"microglial cell activation","termid":"GO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglial cell activation","synonyms":[{"name":"down regulation of microglial cell activation","type":"exact"},{"name":"down-regulation of microglial cell activation","type":"exact"},{"name":"downregulation of microglial cell activation","type":"exact"},{"name":"inhibition of microglial cell activation","type":"narrow"}],"termid":"GO:1903979"}


id: PBO:0049331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIF subunit 2 pseudogene 1","termid":"PBO:0049331"}


id: GO:1990470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs).","definition_xrefs":["PMID:24906153","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"piRNA cluster binding","termid":"GO:1990470"}


id: PBO:0083041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta subunit of the translation initiation factor eIF2B; the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a negative regulator of GCN4 expression","termid":"PBO:0083041"}


id: PBO:0041584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 42","termid":"PBO:0041584"}


id: GO:0070391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoteichoic acid stimulus; lipoteichoic acid is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.","definition_xrefs":["GOC:add","PMID:14665680","PMID:16020688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lipoteichoic acid","synonyms":[{"name":"response to LTA","type":"exact"}],"termid":"GO:0070391"}


id: PBO:0054562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1964","termid":"PBO:0054562"}


id: GO:0032435
data:
  {"annotated_genes":["SJAG_00475","SJAG_03048","SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86432,103079],"is_not":false,"summary":null,"term":"GO:0032435"},{"annotations":[98463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"is_a","term_name":"negative regulation of proteasomal protein catabolic process","termid":"GO:1901799"},{"relation_name":"is_a","term_name":"negative regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000059"},{"relation_name":"negatively_regulates","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"down-regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"downregulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"inhibition of proteasomal ubiquitin-dependent protein catabolic process","type":"narrow"}],"termid":"GO:0032435","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: PBO:0058769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6893","termid":"PBO:0058769"}


id: PATO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000606 absolute angle value (obsolete PATO:0000606)","termid":"PATO:0000606"}


id: PBO:0059014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 1","termid":"PBO:0059014"}


id: GO:0008233
data:
  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id: PBO:0088147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; imports large neutral amino acids into the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088147"}


id: GO:0002511
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Receptor editing occurring in B cells in the bone marrow.","definition_xrefs":["PMID:16460922","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor editing","termid":"GO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"central B cell receptor editing","synonyms":[{"name":"central B lymphocyte receptor editing","type":"exact"},{"name":"central B-cell receptor editing","type":"exact"},{"name":"central B-lymphocyte receptor editing","type":"exact"}],"termid":"GO:0002511"}


id: PBO:0052828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 128, pseudogene","termid":"PBO:0052828"}


id: PBO:0029257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029257"}


id: GO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type III hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hypersensitivity","termid":"GO:0002883"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"regulates","term_name":"type III hypersensitivity","termid":"GO:0001802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type III hypersensitivity","termid":"GO:0001803"}


id: PBO:0062234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 17","termid":"PBO:0062234"}


id: PBO:0051988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"janus kinase and microtubule interacting protein 1","termid":"PBO:0051988"}


id: PBO:0085418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; confers resistance to short-chain monocarboxylic acids and quinidine; involved in the excretion of excess amino acids; AQR1 has a paralog, QDR1, that arose from the whole genome duplication; relocalizes from plasma membrane to cytoplasm upon DNA replication stress","termid":"PBO:0085418"}


id: PATO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that inheres in a molecular entity by virtue of the presence of a conjugated ring of unsaturated bonds, lone pairs, or empty orbitals that exhibit a stabilization stronger than would be expected by the stabilization of conjugation alone.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromaticity","termid":"PATO:0002190"}


id: PBO:0000494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc58","termid":"PBO:0000494"}


id: GO:0050183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-2-(9Z)-octadecenoyl-sn-glycero-3-phosphocholine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = 1-acyl-2-[(R)-12-hydroxyoleoyl]-sn-glycero-3-phosphocholine + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["RHEA:46360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phosphatidylcholine 12-monooxygenase activity","secondary_identifiers":["MetaCyc:PHOSPHATIDYLCHOLINE-12-MONOOXYGENASE-RXN","EC:1.14.18.4","KEGG_REACTION:R03476"],"synonyms":[{"name":"1-acyl-2-oleoyl-sn-glycero-3-phosphocholine,NADH:oxygen oxidoreductase (12-hydroxylating)","type":"related"},{"name":"oleate D12-hydroxylase activity","type":"exact"},{"name":"oleate Delta(12)-hydroxylase activity","type":"related"},{"name":"oleate delta12-hydroxylase activity","type":"related"},{"name":"oleate delta12-monooxygenase activity","type":"related"},{"name":"ricinoleic acid synthase activity","type":"related"}],"termid":"GO:0050183"}


id: PATO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is low relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased age","synonyms":[{"name":"low age","type":"exact"}],"termid":"PATO:0001765"}


id: PBO:0087188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit ABC14.5; common to RNA polymerases I, II, and III","termid":"PBO:0087188"}


id: PBO:0109629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 16 (pseudogene)","termid":"PBO:0109629"}


id: PBO:0069738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1019, pseudogene","termid":"PBO:0069738"}


id: SO:1000162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby the segment between the first two breaks listed is removed and inserted at the third break; the orientation of the insertion with respect to its flanking segments is not recorded.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrachromosomal_transposition","termid":"SO:1000041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unoriented_intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)uTp","type":"related"},{"name":"unorientated intrachromosomal transposition","type":"exact"}],"termid":"SO:1000162"}


id: GO:0050852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen receptor-mediated signaling pathway","termid":"GO:0050851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"T cell receptor signaling pathway","synonyms":[{"name":"T lymphocyte receptor signaling pathway","type":"exact"},{"name":"T lymphocyte receptor signalling pathway","type":"exact"},{"name":"T-cell receptor signaling pathway","type":"exact"},{"name":"T-cell receptor signalling pathway","type":"exact"},{"name":"T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"TCR signaling pathway","type":"exact"}],"termid":"GO:0050852"}


id: GO:0045858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heritable epigenetic process that increases the frequency, rate or extent of protein function by self-perpetuating conformational conversions of normal proteins in healthy cells. This is distinct from, though mechanistically analogous to, disease states associated with prion propagation and amyloidogenesis. A single protein, if it carries a glutamine/asparagine-rich ('prion') domain, can sometimes stably exist in at least two distinct physical states, each associated with a different phenotype; propagation of one of these traits is achieved by a self-perpetuating change in the protein from one form to the other, mediated by conformational changes in the glutamine/asparagine-rich domain. Prion domains are both modular and transferable to other proteins, on which they can confer a heritable epigenetic alteration of function; existing bioinformatics data indicate that they are rare in non-eukarya, but common in eukarya.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of molecular function, epigenetic (obsolete GO:0045858)","synonyms":[{"name":"activation of protein activity, epigenetic","type":"narrow"},{"name":"positive regulation of protein activity, epigenetic","type":"exact"},{"name":"stimulation of protein activity, epigenetic","type":"narrow"},{"name":"up regulation of protein activity, epigenetic","type":"exact"},{"name":"up-regulation of protein activity, epigenetic","type":"exact"},{"name":"upregulation of protein activity, epigenetic","type":"exact"}],"termid":"GO:0045858"}


id: GO:0102989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 H+ + 9,12,15-cis-hexadecatrienoyl-CoA + 3 malonyl-CoA(5-) = 5-(pentadeca-8,11,14-trien-1-yl)resorcinol + 4 coenzyme A + 4 carbon dioxide.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"5-pentadecatrienylresorcinol synthase activity","secondary_identifiers":["MetaCyc:RXN-9618"],"termid":"GO:0102989"}


id: FYPO:0007456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 3' overhang single-stranded DNA endodeoxyribonuclease activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased 3' overhang single-stranded DNA endodeoxyribonuclease activity","termid":"FYPO:0007456"}


id: PR:Q9C105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone deacetylase complex subunit SAP130 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase-like protein PB1E7.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.04c","secondary_identifiers":["UniProtKB:Q9C105"],"synonyms":[{"name":"Spom972h-SAP130","type":"exact"}],"termid":"PR:Q9C105"}


id: GO:0018286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 3Fe-3S iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide. The three-iron three-sulfur cluster probably does not exist except as an intermediate form.","definition_xrefs":["RESID:AA0138"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide (obsolete GO:0018286)","synonyms":[{"name":"iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide","type":"exact"},{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl triiron trisulphide","type":"exact"}],"termid":"GO:0018286"}


id: GO:0120182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of disaggregation of a focal adhesion into its constituent components.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate junction organization","termid":"GO:0150116"},{"relation_name":"regulates","term_name":"focal adhesion disassembly","termid":"GO:0120181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of focal adhesion disassembly","termid":"GO:0120182"}


id: PBO:0055434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2864","termid":"PBO:0055434"}


id: PBO:0034749
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Unlike the human ortholog, this protein is not associated with the NADH complex. Fission yeast does not have the other 40 subunits that are present in that complex in mammals. See associated reference for more information on the human protein","termid":"PBO:0034749"}


id: GO:0046653
data:
  {"annotated_genes":["SJAG_00815","SJAG_01766","SJAG_02225","SJAG_01616","SJAG_02408","SJAG_01126","SJAG_01466","SJAG_04156","SJAG_01198","SJAG_00106","SJAG_03914","SJAG_03712","SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104483,108571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[101061,109844,86334,102204,110226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[100908,108574,104485,92710,87326,90532,94492,100711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrofolate, 5,6,7,8-tetrahydrofolic acid, a folate derivative bearing additional hydrogens on the pterin group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrahydrofolate metabolism","type":"exact"}],"termid":"GO:0046653","terms_by_termid":{"GO:0009257":null,"GO:0035999":null,"GO:0046654":null}}


id: GO:1901531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hypochlorite.","definition_xrefs":["PMID:22223481","GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hypochlorite binding","termid":"GO:1901531"}


id: PBO:0024829
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements human CLN3","termid":"PBO:0024829"}


id: PBO:0082443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in DNA replication during S phase; activates Cdc28p to promote initiation of DNA synthesis; functions in formation of mitotic spindles along with Clb3p and Clb4p; most abundant during late G1 phase; CLB5 has a paralog, CLB6, that arose from the whole genome duplication","termid":"PBO:0082443"}


id: PBO:0049785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 20","termid":"PBO:0049785"}


id: PBO:0067283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 364, pseudogene","termid":"PBO:0067283"}


id: GO:2000324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucocorticoid receptor signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid receptor signaling pathway","termid":"GO:2000322"},{"relation_name":"positively_regulates","term_name":"nuclear receptor-mediated glucocorticoid signaling pathway","termid":"GO:0042921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of glucocorticoid receptor signaling pathway","synonyms":[{"name":"positive regulation of glucocorticoid receptor signalling pathway","type":"exact"}],"termid":"GO:2000324"}


id: PBO:0080917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 6","termid":"PBO:0080917"}


id: PBO:0071601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 18","termid":"PBO:0071601"}


id: PBO:0054697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2106","termid":"PBO:0054697"}


id: PATO:0000745
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000745 behavioral quality value (obsolete PATO:0000745)","termid":"PATO:0000745"}


id: GO:0140547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition of seed longevity is the ordered series of events during seed development, that prevent embryo deterioration and ROS damage and thus contribute to seed viability over time or in response to adverse environmental conditions. These events include protective (e.g. production of glassy cytoplasm ) and repair (e.g. oxidative stress responses) processes.","definition_xrefs":["PMID:26637538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of seed longevity","termid":"GO:0140547"}


id: GO:0008139
data:
  {"annotated_genes":["SJAG_03729","SJAG_02998","SJAG_04411","SJAG_03662","SJAG_00962","SJAG_03299","SJAG_00840","SJAG_01909","SJAG_01013","SJAG_03959"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85045,87953,89472,90037,91822,92187,99495,99790,112006,114888],"is_not":false,"summary":null,"term":"GO:0008139"}]},"cv_name":"molecular_function","definition":"Binding to a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00840":null,"SJAG_00962":null,"SJAG_01013":null,"SJAG_01909":null,"SJAG_02998":null,"SJAG_03299":null,"SJAG_03662":null,"SJAG_03729":null,"SJAG_03959":null,"SJAG_04411":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005048"],"is_obsolete":false,"name":"nuclear localization sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NLS binding","type":"exact"},{"name":"nuclear localisation sequence binding","type":"exact"},{"name":"nuclear localization signal binding","type":"exact"}],"termid":"GO:0008139","terms_by_termid":{"GO:0008139":null}}


id: FYPO:0005917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA derived from subtelomeric heterochromatin regions is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased subtelomeric heterochromatin RNA level","synonyms":[{"name":"accumulation of subtelomere-derived RNA transcripts","type":"related"},{"name":"increased transcription at subtelomere","type":"narrow"},{"name":"increased transcription at subtelomeric heterochromatin during vegetative growth","type":"narrow"}],"termid":"FYPO:0005917"}


id: GO:0005368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of taurine from one side of a membrane to the other. Taurine (2-aminoethanesulfonic acid) is a sulphur-containing amino acid derivative which is important in the metabolism of fats.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid transmembrane transporter activity","termid":"GO:0005342"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"taurine transmembrane transporter activity","termid":"GO:0005368"}


id: GO:1990617
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex that is composed of CHOP (C/EBP homology protein, GADD153) and ATF4 (activating transcription factor 4, also known as cAMP response element binding protein-2/CREB-2) subunits.","definition_xrefs":["PMID:18940792","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"CHOP-ATF4 complex","synonyms":[{"name":"ATF4-CHOP heterodimer","type":"exact"},{"name":"CHOP-ATF4 heterodimer","type":"exact"},{"name":"CHOP-CREB-2 complex","type":"exact"},{"name":"CHOP/ATF4 complex","type":"exact"},{"name":"GADD153-ATF4 complex","type":"exact"}],"termid":"GO:1990617"}


id: PBO:0060127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 28","termid":"PBO:0060127"}


id: GO:1904818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a visceral peritoneum over time, from its formation to the mature structure.","definition_xrefs":["PMID:15840053","GO_REF:0000094","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"peritoneum development","termid":"GO:1904820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visceral peritoneum development","termid":"GO:1904818"}


id: PBO:0109514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VCP nuclear cofactor family member 1","termid":"PBO:0109514"}


id: GO:0009687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"apocarotenoid metabolic process","termid":"GO:0043288"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"abscisic acid metabolic process","synonyms":[{"name":"abscisic acid metabolism","type":"exact"}],"termid":"GO:0009687"}


id: PR:Q9Y6Z9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.10 gene.","definition_xrefs":["UniProtKB:Q9Y6Z9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbose reductase sou1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.10","synonyms":[{"name":"Spom972h-SPAC8E11.10","type":"exact"},{"name":"sorbitol utilization protein sou1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y6Z9"}


id: GO:0005231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts, where channel opening contributes to an increase in membrane potential.","definition_xrefs":["ISBN:0323037070","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"excitatory extracellular ligand-gated monoatomic ion channel activity","secondary_identifiers":["Reactome:R-HSA-399711","Reactome:R-HSA-438037","Reactome:R-HSA-420980","Reactome:R-HSA-432164","Reactome:R-HSA-399712"],"termid":"GO:0005231"}


id: PBO:0057714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1301","termid":"PBO:0057714"}


id: PBO:0082716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the NuA4 histone acetyltransferase complex; acts as a platform for assembly of NuA4 subunits into the native complex; required for initiation of pre-meiotic DNA replication, likely due to its requirement for expression of IME1","termid":"PBO:0082716"}


id: GO:0140701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = 2 diphosphate + cyclic G-P(3'-5')A-P(3'-5') (cyclic 3',3' GAMP).","definition_xrefs":["RHEA:35647","PMID:30787435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic GMP-AMP synthase activity","termid":"GO:0140699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"3',3'-cyclic GMP-AMP synthase activity","synonyms":[{"name":"3',3' cyclic-GAMP synthase activity","type":"exact"},{"name":"3',3' cyclic-GMP-AMP synthase activity","type":"exact"},{"name":"3',3'-cyclic GAMP synthase activity","type":"exact"}],"termid":"GO:0140701"}


id: GO:1901142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving insulin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insulin metabolic process","synonyms":[{"name":"insulin metabolism","type":"exact"}],"termid":"GO:1901142"}


id: GO:1900516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xylose catabolic process to ethanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of xylose catabolic process to ethanol","termid":"GO:1900515"},{"relation_name":"is_a","term_name":"negative regulation of fermentation","termid":"GO:1901003"},{"relation_name":"negatively_regulates","term_name":"D-xylose catabolic process to ethanol","termid":"GO:0044577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of xylose catabolic process to ethanol","synonyms":[{"name":"down regulation of xylose catabolic process to ethanol","type":"exact"},{"name":"down regulation of xylose catabolism to ethanol","type":"exact"},{"name":"down-regulation of xylose catabolic process to ethanol","type":"exact"},{"name":"down-regulation of xylose catabolism to ethanol","type":"exact"},{"name":"downregulation of xylose catabolic process to ethanol","type":"exact"},{"name":"downregulation of xylose catabolism to ethanol","type":"exact"},{"name":"inhibition of xylose catabolic process to ethanol","type":"narrow"},{"name":"inhibition of xylose catabolism to ethanol","type":"exact"},{"name":"negative regulation of xylose catabolism to ethanol","type":"exact"}],"termid":"GO:1900516"}


id: GO:0031443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within fast-twitch skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The fast-twitch skeletal muscle is characterized by fast time parameters, high force development and fatiguability.","definition_xrefs":["GOC:mtg_muscle","GOC:ef","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"twitch skeletal muscle contraction","termid":"GO:0014721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fast-twitch skeletal muscle fiber contraction","synonyms":[{"name":"fast-twitch skeletal fiber contraction","type":"exact"},{"name":"fast-twitch skeletal fibre contraction","type":"exact"},{"name":"fast-twitch skeletal muscle fibre contraction","type":"exact"},{"name":"fast-twitch skeletal myofiber contraction","type":"exact"},{"name":"fast-twitch skeletal myofibre contraction","type":"exact"}],"termid":"GO:0031443"}


id: PBO:0041424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 putative open reading frame 44","termid":"PBO:0041424"}


id: PBO:0039295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG10 alpha-1,2-glucosyltransferase","termid":"PBO:0039295"}


id: FYPO:0006947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during glucose starvation","synonyms":[{"name":"ectopic protein localization to cytoplasm during glucose starvation","type":"exact"},{"name":"protein mislocalised to cytoplasm during glucose starvation","type":"exact"},{"name":"protein mislocalized to cytoplasm during glucose depletion","type":"exact"},{"name":"protein mislocalized to cytoplasm during glucose deprivation","type":"exact"}],"termid":"FYPO:0006947"}


id: GO:0045760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"positively_regulates","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of action potential","synonyms":[{"name":"activation of action potential","type":"narrow"},{"name":"stimulation of action potential","type":"narrow"},{"name":"up regulation of action potential","type":"exact"},{"name":"up-regulation of action potential","type":"exact"},{"name":"upregulation of action potential","type":"exact"}],"termid":"GO:0045760"}


id: FYPO:0002465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in a population of spores are viable, and all have an abnormal shape. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable spore population with abnormal spore shape (obsolete FYPO:0002465)","synonyms":[{"name":"inviable population of spores with abnormal shape","type":"exact"},{"name":"inviable spore population with abnormal shape","type":"exact"}],"termid":"FYPO:0002465"}


id: GO:0038153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL2 to a C-C chemokine type 4 receptor (CCR4) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-C motif) ligand 2 signaling pathway","termid":"GO:0038148"},{"relation_name":"is_a","term_name":"C-C chemokine receptor CCR4 signaling pathway","termid":"GO:0038152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CCL2-activated CCR4 signaling pathway","synonyms":[{"name":"CCL2/CCR4 signaling pathway","type":"related"}],"termid":"GO:0038153"}


id: GO:1904706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell proliferation.","definition_xrefs":["PMID:23246467","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell proliferation","termid":"GO:0048662"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell proliferation","termid":"GO:1904705"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell proliferation","termid":"GO:1990874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell proliferation","synonyms":[{"name":"down regulation of VSMC proliferation","type":"exact"},{"name":"down regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"down-regulation of VSMC proliferation","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"downregulation of VSMC proliferation","type":"exact"},{"name":"downregulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"inhibition of VSMC proliferation","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell proliferation","type":"narrow"},{"name":"negative regulation of VSMC proliferation","type":"exact"},{"name":"negative regulation of vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1904706"}


id: PBO:0109406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_ontology_root_term","termid":"PBO:0109406"}


id: GO:1900503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellulosome assembly.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"cellulosome assembly","termid":"GO:0044575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cellulosome assembly","termid":"GO:1900503"}


id: GO:0044648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 4 of the histone.","definition_xrefs":["PMID:21875999","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 dimethylation (obsolete GO:0044648)","termid":"GO:0044648"}


id: GO:0000477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cleavage within ITS2 to generate the mature 5'-end of an LSU-rRNA derived from a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","synonyms":[{"name":"processing at C1","type":"narrow"}],"termid":"GO:0000477"}


id: FYPO:0007483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic spindle pole body duplication is abnormal during the first meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle pole body duplication","termid":"FYPO:0007258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic spindle pole body duplication during meiosis I","synonyms":[{"name":"abnormal meiotic SPB duplication during meiosis I","type":"exact"},{"name":"abnormal meiotic spindle pole body duplication during first meiotic nuclear division","type":"exact"},{"name":"abnormal spindle pole body duplication during meiosis I","type":"exact"}],"termid":"FYPO:0007483"}


id: PBO:0076314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synemin","termid":"PBO:0076314"}


id: PBO:0055582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3018","termid":"PBO:0055582"}


id: GO:1904465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of matrix metallopeptidase secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8679543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of matrix metallopeptidase secretion","termid":"GO:1904464"},{"relation_name":"negatively_regulates","term_name":"matrix metallopeptidase secretion","termid":"GO:1990773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of matrix metallopeptidase secretion","synonyms":[{"name":"down regulation of MMP secretion","type":"exact"},{"name":"down regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"down regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"down-regulation of MMP secretion","type":"exact"},{"name":"down-regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"down-regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"downregulation of MMP secretion","type":"exact"},{"name":"downregulation of matrix metallopeptidase secretion","type":"exact"},{"name":"downregulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"inhibition of MMP secretion","type":"narrow"},{"name":"inhibition of matrix metallopeptidase secretion","type":"narrow"},{"name":"inhibition of matrix metalloproteinase secretion","type":"narrow"},{"name":"negative regulation of MMP secretion","type":"exact"},{"name":"negative regulation of matrix metalloproteinase secretion","type":"narrow"}],"termid":"GO:1904465"}


id: PATO:0000595
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased volume","synonyms":[{"name":"high volume","type":"exact"},{"name":"large volume","type":"related"}],"termid":"PATO:0000595"}


id: PBO:0042475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 2","termid":"PBO:0042475"}


id: GO:0052771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coenzyme F390-G = GMP + coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:9352911","PMID:8536708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"coenzyme F390-G hydrolase activity","synonyms":[{"name":"8-hydroxyguanylylated-coenzyme F420 hydrolase activity","type":"exact"}],"termid":"GO:0052771"}


id: PBO:0066676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLF zinc finger","termid":"PBO:0066676"}


id: GO:1902447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of shade avoidance.","definition_xrefs":["PMID:23763263","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of shade avoidance","termid":"GO:1902446"},{"relation_name":"negatively_regulates","term_name":"shade avoidance","termid":"GO:0009641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of shade avoidance","synonyms":[{"name":"down regulation of shade avoidance","type":"exact"},{"name":"down-regulation of shade avoidance","type":"exact"},{"name":"downregulation of shade avoidance","type":"exact"},{"name":"inhibition of shade avoidance","type":"narrow"}],"termid":"GO:1902447"}


id: PBO:0045600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 11 (pseudogene)","termid":"PBO:0045600"}


id: PBO:0048548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor independent 1B transcriptional repressor","termid":"PBO:0048548"}


id: PBO:0063085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 4","termid":"PBO:0063085"}


id: GO:0070327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of thyroid hormone into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone transport","termid":"GO:0009914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"thyroid hormone transport","synonyms":[{"name":"thyroxine transport","type":"narrow"},{"name":"triiodothyronine transport","type":"narrow"}],"termid":"GO:0070327"}


id: PBO:0016580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transporter Mmt1 (predicted)","termid":"PBO:0016580"}


id: PBO:0086054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cell periphery, SWAT-GFP fusion also localizes to the extracellular region, and mCherry fusion also localizes to the vacuole; deletion mutants are viable and have elevated levels of Ty1 retrotransposition and Ty1 cDNA","termid":"PBO:0086054"}


id: GO:0000470
data:
  {"annotated_genes":["SJAG_02275","SJAG_02952","SJAG_01581","SJAG_00949","SJAG_00749","SJAG_02427","SJAG_01821","SJAG_01811","SJAG_02374","SJAG_02417","SJAG_04289","SJAG_04669","SJAG_05223","SJAG_00689","SJAG_00722","SJAG_00537","SJAG_04492","SJAG_04890","SJAG_02830","SJAG_04330","SJAG_00882","SJAG_05190","SJAG_03012","SJAG_03789","SJAG_04108","SJAG_00752"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88838,88932,92278,104011,109780,112342,115086],"is_not":false,"summary":null,"term":"GO:0000470"},{"annotations":[91004,100237,87717,114740],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[75157,88413,111490,113838,94056,88121,102125,106957,76236,85872,111013,96825,113859,94023,85660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000463"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"},{"relation_name":"part_of","term_name":"ribosomal large subunit biogenesis","termid":"GO:0042273"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00537":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01581":null,"SJAG_01811":null,"SJAG_01821":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02417":null,"SJAG_02427":null,"SJAG_02830":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03789":null,"SJAG_04108":null,"SJAG_04289":null,"SJAG_04330":null,"SJAG_04492":null,"SJAG_04669":null,"SJAG_04890":null,"SJAG_05190":null,"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"maturation of LSU-rRNA","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000470","terms_by_termid":{"GO:0000448":null,"GO:0000463":null,"GO:0000470":null}}


id: PBO:0049510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 17","termid":"PBO:0049510"}


id: PBO:0011965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type(predicted)","termid":"PBO:0011965"}


id: GO:0060534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the tracheal cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage development","termid":"GO:0051216"},{"relation_name":"part_of","term_name":"trachea development","termid":"GO:0060438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea cartilage development","termid":"GO:0060534"}


id: PBO:0080715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WRN RecQ like helicase","termid":"PBO:0080715"}


id: PBO:0030014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_caspofungin","termid":"PBO:0030014"}


id: GO:0030424
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.","definition_xrefs":["ISBN:0198506732","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon","secondary_identifiers":["Wikipedia:Axon","NIF_Subcellular:sao1770195789"],"termid":"GO:0030424"}


id: PBO:0081184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc fingers and homeoboxes 1","termid":"PBO:0081184"}


id: PBO:0069308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 564, pseudogene","termid":"PBO:0069308"}


id: PBO:0002441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase Lcb2 (predicted)","termid":"PBO:0002441"}


id: PBO:0040020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 8 pseudogene 1","termid":"PBO:0040020"}


id: PBO:0091351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial expression network (MIOREX) component Mrx11","termid":"PBO:0091351"}


id: PBO:0090562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, disaggregase Hsp104","termid":"PBO:0090562"}


id: PR:Q9Y7V2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC645.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7V2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor bye1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.13","synonyms":[{"name":"Spom972h-SPCC645.13","type":"exact"}],"termid":"PR:Q9Y7V2"}


id: PBO:0083377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps 5' end of the verified essential gene SUI3/YPL237W","termid":"PBO:0083377"}


id: PBO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein","termid":"PBO:0001527"}


id: PBO:0005868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-specific polypeptide Pi","termid":"PBO:0005868"}


id: GO:0051350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of lyase activity, the catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lyase activity","synonyms":[{"name":"down regulation of lyase activity","type":"exact"},{"name":"down-regulation of lyase activity","type":"exact"},{"name":"downregulation of lyase activity","type":"exact"},{"name":"inhibition of lyase activity","type":"narrow"},{"name":"lyase inhibitor","type":"exact"}],"termid":"GO:0051350"}


id: PBO:0075040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-3","termid":"PBO:0075040"}


id: MOD:01534
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01534"}


id: GO:1990151
data:
  {"annotated_genes":["SJAG_03011","SJAG_01373","SJAG_03915","SJAG_00851","SJAG_02392","SJAG_01196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91910,86988],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903067"},{"annotations":[87319,110212,112361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990896"},{"annotations":[99870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at the cell tip.","definition_xrefs":["PMID:22768263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00851":null,"SJAG_01196":null,"SJAG_01373":null,"SJAG_02392":null,"SJAG_03011":null,"SJAG_03915":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cell tip","type":"exact"}],"termid":"GO:1990151","terms_by_termid":{"GO:0099117":null,"GO:1903067":null,"GO:1990896":null}}


id: RO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of intracellular endoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"has_endoparasite","termid":"RO:0002635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intracellular_endoparasite","termid":"RO:0002641"}


id: PBO:0048575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin binding protein 2","termid":"PBO:0048575"}


id: PBO:0003483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine methyltransferase Set10","termid":"PBO:0003483"}


id: GO:0016472
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of sodium ions across a membrane. The complex comprises a membrane sector (F0 or V0) that carries out ion transport and a cytoplasmic compartment sector (F1 or V1) that catalyzes ATP synthesis or hydrolysis.","definition_xrefs":["GOC:mah","PMID:14656431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sodium ion-transporting two-sector ATPase complex","synonyms":[{"name":"sodium-transporting two-sector ATPase complex","type":"exact"}],"termid":"GO:0016472"}


id: GO:1903932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA primase activity.","definition_xrefs":["GOC:TermGenie","PMID:14766746","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of DNA primase activity","termid":"GO:1903932"}


id: FYPO:0001570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione (GSH) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular glutathione level during vegetative growth","synonyms":[{"name":"decreased cellular GSH level during vegetative growth","type":"exact"},{"name":"decreased cellular L-gamma-glutamyl-L-cysteinylglycine level during vegetative growth","type":"exact"},{"name":"decreased cellular glutathione level during mitotic cell cycle","type":"related"},{"name":"decreased cellular reduced glutathione level during vegetative growth","type":"exact"},{"name":"decreased glutathione accumulation during vegetative growth","type":"related"},{"name":"reduced cellular glutathione level during vegetative growth","type":"exact"}],"termid":"FYPO:0001570"}


id: GO:0097201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["PMID:15575969","PMID:18086556","GOC:rn","PMID:16556235","PMID:11027285","PMID:18627600"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to stress (obsolete GO:0097201)","termid":"GO:0097201"}


id: GO:0019148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-cysteine + H2O = sulfide + NH3 + pyruvate.","definition_xrefs":["EC:4.4.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-cysteine desulfhydrase activity","secondary_identifiers":["RHEA:11268","MetaCyc:DCYSDESULF-RXN"],"synonyms":[{"name":"D-cysteine lyase activity","type":"related"},{"name":"D-cysteine sulfide-lyase (deaminating)","type":"related"},{"name":"D-cysteine sulfide-lyase (deaminating; pyruvate-forming)","type":"related"}],"termid":"GO:0019148"}


id: PATO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A perimeter which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased length","termid":"PATO:0000574"},{"relation_name":"is_a","term_name":"perimeter","termid":"PATO:0001711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased perimeter","termid":"PATO:0001713"}


id: PBO:0113153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase, component of both Rpd3S and Rpd3L complexes; regulates transcription, silencing, autophagy and other processes by influencing chromatin remodeling; forms at least two different complexes which have distinct functions and members; Rpd3(L) recruitment to the subtelomeric region is regulated by interaction with the Hmt1p methyltransferase; delays late firing of single copy origins by opposing the Fkh1/2 origin activation pathway","termid":"PBO:0113153"}


id: PR:O60081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trm72 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1494.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.07","synonyms":[{"name":"Spom972h-trm72","type":"exact"}],"termid":"PR:O60081"}


id: PBO:0113263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3-phosphate binding protein; forms a distinct complex with TORC1, induced by glutamine in a dose-dependent manner, resulting in TORC1 activation, suggesting dual roles as both a glutamine sensor and a direct TORC1 activator; functions as a cysteine sensor involved in TORC1 activation; involved in leucine- and glutamine-responsive TORC1 activation, independent of the Gtr/Ego pathway; related to human PLEKHF1; contains a PI3P binding FYVE domain; similar to Fab1p and Vps27p","termid":"PBO:0113263"}


id: GO:0005078
data:
  {"annotated_genes":["SJAG_01199","SJAG_03625","SJAG_04503"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93276,96060,113558],"is_not":false,"summary":null,"term":"GO:0005078"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. Binds multiple kinases of the MAPKKK cascade, and also upstream signaling proteins, permitting those molecules to function in a coordinated way. Bringing together multiple enzymes and their substrates enables the signal to be transduced quickly and efficiently.","definition_xrefs":["PMID:9405336","PMID:12511654","PMID:15213240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling adaptor activity","termid":"GO:0035591"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01199":null,"SJAG_03625":null,"SJAG_04503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"MAP-kinase scaffold activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAP-kinase scaffold protein activity","type":"exact"}],"termid":"GO:0005078","terms_by_termid":{"GO:0005078":null}}


id: PBO:0029511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_stubby_cells_(obsolete_FYPO:0002203)","termid":"PBO:0029511"}


id: PBO:0080114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV radiation resistance associated","termid":"PBO:0080114"}


id: PBO:0044936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyguanosine kinase","termid":"PBO:0044936"}


id: PBO:0034095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_develops_into","termid":"PBO:0034095"}


id: SO:0000499
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A continuous piece of sequence similar to the 'virtual contig' concept of the Ensembl database.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"virtual_sequence","synonyms":[{"name":"virtual sequence","type":"exact"}],"termid":"SO:0000499"}


id: PBO:0063235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha cluster, complex locus","termid":"PBO:0063235"}


id: PBO:0081106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 related cell cycle regulator","termid":"PBO:0081106"}


id: GO:2000128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of octopamine or tyramine signaling pathway","termid":"GO:2000125"},{"relation_name":"regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of octopamine signaling pathway","synonyms":[{"name":"regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000128"}


id: SO:0000317
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Complementary DNA; A piece of DNA copied from an mRNA and spliced into a vector for propagation in a suitable host.","direct_ancestors":[{"relation_name":"has_quality","term_name":"cDNA","termid":"SO:0000756"},{"relation_name":"is_a","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cDNA_clone","synonyms":[{"name":"cDNA clone","type":"exact"}],"termid":"SO:0000317"}


id: PBO:0030868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cytoskeleton_organization","termid":"PBO:0030868"}


id: GO:0060897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of an axis or axes of the neural plate in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"neural plate pattern specification","termid":"GO:0060896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate regionalization","termid":"GO:0060897"}


id: PBO:0015696
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SSK1","termid":"PBO:0015696"}


id: PBO:0073624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 10","termid":"PBO:0073624"}


id: FYPO:0007366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2,3-bisphosphoglyceric acid measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular bisphosphoglyceric acid level","termid":"FYPO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular 2,3-bisphosphoglyceric acid level","synonyms":[{"name":"decreased cellular 2,3-bisphosphoglycerate level","type":"related"},{"name":"decreased cellular 2,3-bisphosphoglyceric acid level during mitotic cell cycle","type":"related"},{"name":"decreased cellular 2,3-bisphosphoglyceric acid level during vegetative growth","type":"exact"},{"name":"decreased cellular 2-/3-bisphosphoglyceric acid level","type":"exact"},{"name":"decreased level of 2,3-bisphosphoglyceric acid in cell","type":"exact"},{"name":"reduced cellular 2,3-bisphosphoglyceric acid level","type":"exact"}],"termid":"FYPO:0007366"}


id: PBO:0110979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 molecule (IN blood group)","termid":"PBO:0110979"}


id: PBO:0049723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 6 pseudogene 1","termid":"PBO:0049723"}


id: PR:P36602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase large subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:14648198","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase large chain (Schizosaccharomyces pombe)","termid":"PR:000036298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase large chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.05","secondary_identifiers":["PR:000027719","UniProtKB:P36602"],"synonyms":[{"name":"Spom972h-cdc22","type":"exact"}],"termid":"PR:P36602"}


id: GO:0032016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of Ran protein signal transduction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Ran protein signal transduction (obsolete GO:0032016)","synonyms":[{"name":"down regulation of Ran protein signal transduction","type":"exact"},{"name":"down-regulation of Ran protein signal transduction","type":"exact"},{"name":"downregulation of Ran protein signal transduction","type":"exact"},{"name":"inhibition of Ran protein signal transduction","type":"narrow"}],"termid":"GO:0032016"}


id: PBO:0013780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type Mca1 (predicted)","termid":"PBO:0013780"}


id: GO:0102630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5,7-pentahydroxy-8-methoxyflavon-3-olate + S-adenosyl-L-methionine = gossypetin 3',8-dimethyl ether + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"gossypetin 8-methyl ester 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15536"],"termid":"GO:0102630"}


id: PBO:0091601
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was originally annotated as SPNCRNA.263 on the forward strand, from non-strand specific data","termid":"PBO:0091601"}


id: GO:2001056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endopeptidase activity","termid":"GO:0010950"},{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity","termid":"GO:2000116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cysteine-type endopeptidase activity","synonyms":[{"name":"positive regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"positive regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2001056"}


id: MOD:00255
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-histidine residue and an L-tyrosine residue by a carbon-nitrogen bond to form 3-(3'-L-histidyl)-L-tyrosine.","definition_xrefs":["PubMed:9144772","RESID:AA0250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(3'-L-histidyl)-L-tyrosine","synonyms":[{"name":"(2S,3R)-2-amino-3-(5-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"3-(3'-L-histidyl)-L-tyrosine","type":"exact"},{"name":"3-(N3'-histidyl)tyrosine","type":"exact"},{"name":"3-(pi-histidyl)tyrosine","type":"exact"},{"name":"3-(pros-histidyl)tyrosine","type":"exact"},{"name":"CROSSLNK 3'-histidyl-3-tyrosine (His-Tyr)","type":"exact"},{"name":"beta-(N(delta)-histidyl)tyrosine","type":"exact"},{"name":"beta-(N3'-histidyl)tyrosine","type":"exact"}],"termid":"MOD:00255"}


id: FYPO:0004587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing urea as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002058","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"abolished cell population growth on urea nitrogen source","synonyms":[{"name":"abolished urea utilization","type":"related"},{"name":"abolished vegetative cell population growth on urea nitrogen source","type":"exact"},{"name":"cell population growth on urea nitrogen source abolished","type":"exact"}],"termid":"FYPO:0004587"}


id: PR:Q9US28
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1783.01 gene.","definition_xrefs":["UniProtKB:Q9US28","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C1783.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.01","synonyms":[{"name":"Spom972h-SPAC1783.01","type":"exact"}],"termid":"PR:Q9US28"}


id: PBO:0042336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD68 molecule","termid":"PBO:0042336"}


id: PBO:0074562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 16","termid":"PBO:0074562"}


id: GO:0062171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lutein.","definition_xrefs":["PMID:24397433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"lutein metabolic process","termid":"GO:0062170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lutein biosynthetic process","synonyms":[{"name":"lutein anabolism","type":"exact"},{"name":"lutein biosynthesis","type":"exact"},{"name":"lutein formation","type":"exact"}],"termid":"GO:0062171"}


id: PBO:0081892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 843","termid":"PBO:0081892"}


id: GO:0032903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of nerve growth factor (NGF).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotrophin production","termid":"GO:0032899"},{"relation_name":"regulates","term_name":"nerve growth factor production","termid":"GO:0032902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nerve growth factor production","synonyms":[{"name":"regulation of NGF production","type":"exact"},{"name":"regulation of beta-nerve growth factor production","type":"exact"}],"termid":"GO:0032903"}


id: GO:0160127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that rescues stalled ribosomes by removing the covalent cross-link between RNA and a protein.","definition_xrefs":["PMID:37951216","PMID:37951215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rescue of stalled ribosome","termid":"GO:0072344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"protein-RNA covalent cross-linking repair","termid":"GO:0160127"}


id: GO:0005707
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during interphase of the cell cycle. Chromosomes are usually decondensed during interphase and each long DNA molecule in a chromosome is divided into a large number of discrete domains that are folded differently.","definition_xrefs":["ISBN:0815316194","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete interphase chromosome (obsolete GO:0005707)","synonyms":[{"name":"interphase chromosome","type":"exact"}],"termid":"GO:0005707"}


