# terms

id: PBO:0050959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 2","termid":"PBO:0050959"}


id: PBO:0041045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 2","termid":"PBO:0041045"}


id: GO:0044584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellodextrin, a glucose polymer of 2 or more glucose monomers.","definition_xrefs":["GOC:mengo_curators","GOC:tt","PMID:18952792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"},{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cellodextrin binding","termid":"GO:0044584"}


id: GO:0004855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xanthine + H2O + O2 = urate + hydrogen peroxide.","definition_xrefs":["EC:1.17.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"xanthine oxidase activity","secondary_identifiers":["Reactome:R-HSA-74258","Reactome:R-HSA-9748991","MetaCyc:XANTHINE-OXIDASE-RXN","RHEA:21132"],"synonyms":[{"name":"Schardinger enzyme activity","type":"related"},{"name":"hypoxanthine-xanthine oxidase activity","type":"broad"},{"name":"schardinger enzyme","type":"related"},{"name":"xanthine oxidoreductase activity","type":"broad"},{"name":"xanthine:O2 oxidoreductase activity","type":"related"},{"name":"xanthine:oxygen oxidoreductase activity","type":"related"},{"name":"xanthine:xanthine oxidase activity","type":"related"}],"termid":"GO:0004855"}


id: PBO:0034698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex subunit, ATP-dependent RNA helicase Fal1","termid":"PBO:0034698"}


id: GO:0031060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of methyl groups to histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone methylation (obsolete GO:0031060)","termid":"GO:0031060"}


id: GO:0036215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stem cell factor (SCF) stimulus.","definition_xrefs":["GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stem cell factor","synonyms":[{"name":"response to KIT ligand","type":"exact"},{"name":"response to SCF","type":"exact"},{"name":"response to hematopoietic growth factor KL","type":"exact"},{"name":"response to stem cell factor stimulus","type":"exact"}],"termid":"GO:0036215"}


id: PBO:0038520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 2 pseudogene 2","termid":"PBO:0038520"}


id: PBO:0110044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP3 pseudogene 1","termid":"PBO:0110044"}


id: GO:1904823
data:
  {"annotated_genes":["SJAG_03777","SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[108704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[111320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"}]},"cv_name":"biological_process","definition":"The process in which a purine nucleobase is transported across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transport","termid":"GO:0006863"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"purine nucleobase transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904823","terms_by_termid":{"GO:0098702":null,"GO:0098710":null,"GO:0140140":null}}


id: GO:0072028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nephron are generated and organized. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron morphogenesis","termid":"GO:0072028"}


id: PBO:0087643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the glycosylphosphatidylinositol transamidase complex; involved in attachment of glycosylphosphatidylinositol (GPI) anchors to proteins; may have a role in recognition of the attachment signal or the lipid portion of GPI; ortholog of human PIGU; partially complements a class U CHO cell line with a mutation in the PIGU ortholog","termid":"PBO:0087643"}


id: PBO:0047168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 1","termid":"PBO:0047168"}


id: GO:0006451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The continuation of translation beyond a stop codon by the use of a special tRNA that recognizes the UAG and UGA codons as modified amino acids, rather than as termination codons.","definition_xrefs":["GOC:jsg","PMID:11179232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translational readthrough","synonyms":[{"name":"natural nonsense suppression","type":"related"}],"termid":"GO:0006451"}


id: PBO:0061721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2F","termid":"PBO:0061721"}


id: GO:0010720
data:
  {"annotated_genes":["SJAG_02392","SJAG_02169","SJAG_04853","SJAG_00514","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90624,85896,91904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[98391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"positively_regulates","term_name":"cell development","termid":"GO:0048468"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010720","terms_by_termid":{"GO:0051519":null,"GO:0075296":null,"GO:1903024":null}}


id: GO:0060094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycinergic synaptic transmission. Glycinergic synaptic transmission is the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine.","definition_xrefs":["GOC:dms","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glycinergic","termid":"GO:0060092"},{"relation_name":"positively_regulates","term_name":"synaptic transmission, glycinergic","termid":"GO:0060012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic transmission, glycinergic","synonyms":[{"name":"positive regulation of glycinergic synaptic transmission","type":"exact"}],"termid":"GO:0060094"}


id: GO:0004691
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97947],"is_not":false,"summary":null,"term":"GO:0004691"}]},"cv_name":"molecular_function","definition":"cAMP-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["PMID:35805104","PMID:32935175","PMID:35053423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide-dependent protein kinase activity","termid":"GO:0004690"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140096","GO:0004672","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"cAMP-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-432232","EC:2.7.11.11","Reactome:R-HSA-5617179","Reactome:R-HSA-177284","Reactome:R-HSA-5617182","Reactome:R-HSA-163672","Reactome:R-HSA-163773","Reactome:R-HSA-163676","GO:0008602","Reactome:R-HSA-5610741","Reactome:R-HSA-913451","Reactome:R-HSA-177275","Reactome:R-HSA-9838321","Reactome:R-HSA-5610720","Reactome:R-HSA-5610717","Reactome:R-HSA-5687088"],"synonyms":[{"name":"3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"AMPK","type":"related"},{"name":"ATP:protein phosphotransferase (cAMP-dependent) activity","type":"related"},{"name":"PKA","type":"related"},{"name":"PKA C","type":"related"},{"name":"STK22","type":"related"},{"name":"adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"protein kinase A activity","type":"broad"}],"termid":"GO:0004691","terms_by_termid":{"GO:0004691":null}}


id: PBO:0029271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029271"}


id: PBO:0087312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small subunit of carbamoyl phosphate synthetase; carbamoyl phosphate synthetase catalyzes a step in the synthesis of citrulline, an arginine precursor; translationally regulated by an attenuator peptide encoded by YOR302W within the CPA1 mRNA 5'-leader","termid":"PBO:0087312"}


id: GO:0072668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a tubulin complex. Includes the synthesis and folding of the constituent protein molecules, and those protein modifications that are involved in synthesis or assembly of the complex. A tubulin complex is a heterodimer of tubulins alpha and beta, from which microtubules are assembled.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tubulin complex biogenesis (obsolete GO:0072668)","synonyms":[{"name":"tubulin complex biogenesis","type":"exact"}],"termid":"GO:0072668"}


id: GO:0035352
data:
  {"annotated_genes":["SJAG_04328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The process in which a nicotinamide adenine dinucleotide is transported across a membrane; transport may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD transport","termid":"GO:0043132"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"NAD transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD membrane transport","type":"exact"}],"termid":"GO:0035352","terms_by_termid":{"GO:1990549":null}}


id: FYPO:0002681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased protein phosphorylation during nitrogen starvation","synonyms":[{"name":"increased protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"increased protein phosphorylation during nitrogen depletion","type":"exact"},{"name":"increased protein phosphorylation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002681"}


id: GO:1900858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of brevianamide F biosynthetic process (obsolete GO:1900858)","synonyms":[{"name":"regulation of brevianamide F anabolism","type":"exact"},{"name":"regulation of brevianamide F biosynthesis","type":"exact"},{"name":"regulation of brevianamide F formation","type":"exact"},{"name":"regulation of brevianamide F synthesis","type":"exact"}],"termid":"GO:1900858"}


id: PR:O74754
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit gamma, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02710","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit gamma, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.13","secondary_identifiers":["UniProtKB:O74754"],"synonyms":[{"name":"F-ATPase gamma subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP5C1","type":"exact"}],"termid":"PR:O74754"}


id: GO:0015742
data:
  {"annotated_genes":["SJAG_00275","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108422],"is_not":false,"summary":null,"term":"GO:0015742"},{"annotations":[92626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990550"}]},"cv_name":"biological_process","definition":"The directed movement of alpha-ketoglutarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"alpha-ketoglutarate transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2-oxoglutarate transport","type":"exact"},{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"related"}],"termid":"GO:0015742","terms_by_termid":{"GO:0015742":null,"GO:1990550":null}}


id: FYPO:0006756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more specific promoter element(s) is increased when the cell is subject to glucose starvation.","definition_xrefs":["PMID:28934464","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased chromatin binding at promoter element during glucose starvation","synonyms":[{"name":"increased chromatin binding at promoter element during glucose depletion","type":"exact"},{"name":"increased chromatin binding at promoter element during glucose deprivation","type":"related"}],"termid":"FYPO:0006756"}


id: PBO:0084360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-homoserine-O-acetyltransferase; catalyzes the conversion of homoserine to O-acetyl homoserine which is the first step of the methionine biosynthetic pathway","termid":"PBO:0084360"}


id: PBO:0114081
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of Heat Sensitivity","termid":"PBO:0114081"}


id: FYPO:0006770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which kinetochore disassembly is abnormal during prophase of meiosis I. Normally, outer kinetochore components delocalize from the centromere during bouquet formation in meiotic prophase I.","definition_xrefs":["PomBase:mah","PMID:27611693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal kinetochore disassembly during meiotic prophase I","synonyms":[{"name":"abnormal kinetochore disassembly during prophase I","type":"exact"},{"name":"abnormal kinetochore disassembly during prophase of meiosis I","type":"exact"},{"name":"defective kinetochore disassembly during meiotic prophase I","type":"exact"}],"termid":"FYPO:0006770"}


id: GO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of antigen sampling carried out by dendritic cells in the mucosal-associated lymphoid tissue.","definition_xrefs":["PMID:11896763","PMID:15681746","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen sampling in mucosal-associated lymphoid tissue","termid":"GO:0002404"},{"relation_name":"part_of","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen sampling by dendritic cells in mucosal-associated lymphoid tissue","synonyms":[{"name":"antigen sampling by dendritic cells in MALT","type":"exact"}],"termid":"GO:0002405"}


id: GO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork.","definition_xrefs":["ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ruffle","synonyms":[{"name":"membrane ruffle","type":"related"}],"termid":"GO:0001726"}


id: PBO:0048762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell-less 2, spermatogenesis associated","termid":"PBO:0048762"}


id: GO:1904671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of cell differentiation that is involved in stem cell population maintenance.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","GOC:BHF","GO_REF:0000060","PMID:19409607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation involved in stem cell population maintenance","synonyms":[{"name":"down regulation of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"down regulation of cell differentiation involved in stem cell population maintenance","type":"exact"},{"name":"down-regulation of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"down-regulation of cell differentiation involved in stem cell population maintenance","type":"exact"},{"name":"downregulation of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"downregulation of cell differentiation involved in stem cell population maintenance","type":"exact"},{"name":"inhibition of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"inhibition of cell differentiation involved in stem cell population maintenance","type":"narrow"},{"name":"negative regulation of cell differentiation involved in maintenance of pluripotency","type":"related"}],"termid":"GO:1904671"}


id: PBO:0053011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 1","termid":"PBO:0053011"}


id: GO:0023070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the air.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via air (obsolete GO:0023070)","synonyms":[{"name":"signal transmission via air","type":"exact"}],"termid":"GO:0023070"}


id: PBO:0056821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 13A","termid":"PBO:0056821"}


id: PATO:0001314
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of the bearer's having or exhibiting variation of temperature.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of temperature","termid":"PATO:0001304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant temperature","termid":"PATO:0001314"}


id: PR:O59764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ER membrane protein complex subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04440","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.11c","secondary_identifiers":["UniProtKB:O59764"],"synonyms":[{"name":"Spom972h-EMC6","type":"exact"}],"termid":"PR:O59764"}


id: GO:0070094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of glucagon.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucagon secretion","termid":"GO:0070092"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"glucagon secretion","termid":"GO:0070091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of glucagon secretion","synonyms":[{"name":"activation of glucagon secretion","type":"narrow"},{"name":"stimulation of glucagon secretion","type":"narrow"},{"name":"up regulation of glucagon secretion","type":"exact"},{"name":"up-regulation of glucagon secretion","type":"exact"},{"name":"upregulation of glucagon secretion","type":"exact"}],"termid":"GO:0070094"}


id: GO:0006684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingomyelin metabolic process","synonyms":[{"name":"sphingomyelin metabolism","type":"exact"}],"termid":"GO:0006684"}


id: PBO:0004633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase (predicted)","termid":"PBO:0004633"}


id: SO:0001751
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL6 RNA leader sequence to the 5' end of an mRNA. SL6 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL6_acceptor_site","synonyms":[{"name":"SL6 acceptor site","type":"exact"}],"termid":"SO:0001751"}


id: PBO:0053950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1255","termid":"PBO:0053950"}


id: PBO:0087353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor; component of the U4/U6-U5 snRNP complex","termid":"PBO:0087353"}


id: PBO:0059297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L46","termid":"PBO:0059297"}


id: PBO:0043589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XIX alpha 1 chain","termid":"PBO:0043589"}


id: PR:Q9Y812
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3-like centromeric protein cnp1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:Q9Y812","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"histone H3-like centromeric protein cnp1 (Schizosaccharomyces pombe)","termid":"PR:000041369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-like centromeric protein cnp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.17","synonyms":[{"name":"CENP-A homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cnp1","type":"exact"},{"name":"centromere protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"silencing in the middle of the centromere protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y812"}


id: PBO:0040904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 8","termid":"PBO:0040904"}


id: GO:0086022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of SA node cardiomyocyte to an atrial cardiomyocyte via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"SA node cell to atrial cardiac muscle cell communication","termid":"GO:0086070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"SA node cell-atrial cardiac muscle cell adhesion involved in cell communication","synonyms":[{"name":"SA cardiac muscle cell-atrial cardiac muscle cell adhesion involved in cell communication","type":"exact"},{"name":"SA cardiomyocyte-atrial cardiomyocyte adhesion involved in cell communication","type":"exact"},{"name":"SAN cardiomyocyte-atrial cardiomyocyte adhesion involved in cell communication","type":"exact"},{"name":"sinoatrial node cardiomyocyte-atrial cardiomyocyte adhesion involved in cell communication","type":"exact"},{"name":"sinus node cardiomyocyte-atrial cardiomyocyte adhesion involved in cell communication","type":"narrow"}],"termid":"GO:0086022"}


id: GO:0005766
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lysosome before it has fused with a vesicle or vacuole.","definition_xrefs":["GOC:jl","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"primary lysosome","secondary_identifiers":["NIF_Subcellular:sao1140587416"],"termid":"GO:0005766"}


id: GO:0045311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of a pheromone stimulus.","definition_xrefs":["GOC:dph","GOC:mcc","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"},{"relation_name":"part_of","term_name":"response to pheromone","termid":"GO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to pheromone","termid":"GO:0045311"}


id: PBO:0016120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific polypeptide Pi","termid":"PBO:0016120"}


id: FYPO:0006871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"increased protein phosphorylation during cellular response to IR","type":"exact"},{"name":"increased protein phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006871"}


id: GO:1900924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycine import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of glycine import across plasma membrane","termid":"GO:1900923"},{"relation_name":"negatively_regulates","term_name":"glycine import across plasma membrane","termid":"GO:1903804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of glycine import across plasma membrane","synonyms":[{"name":"down regulation of glycine import","type":"exact"},{"name":"down-regulation of glycine import","type":"exact"},{"name":"downregulation of glycine import","type":"exact"},{"name":"inhibition of glycine import","type":"narrow"},{"name":"negative regulation of glycine import","type":"broad"}],"termid":"GO:1900924"}


id: PBO:0049091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 148","termid":"PBO:0049091"}


id: SO:0001346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_2_prime_O_dimethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_two_prime_O_dimethyluridine","secondary_identifiers":["RNAMOD:054"],"synonyms":[{"name":"5,2'-O-dimethyluridine","type":"exact"},{"name":"five two prime O dimethyluridine","type":"exact"},{"name":"m5Um","type":"exact"}],"termid":"SO:0001346"}


id: PBO:0026706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_proline_level","termid":"PBO:0026706"}


id: GO:0033672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of NAD kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an NAD molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of NAD+ kinase activity (obsolete GO:0033672)","synonyms":[{"name":"NAD+ kinase activator","type":"narrow"},{"name":"stimulation of NAD+ kinase activity","type":"narrow"},{"name":"up regulation of NAD+ kinase activity","type":"exact"},{"name":"up-regulation of NAD+ kinase activity","type":"exact"},{"name":"upregulation of NAD+ kinase activity","type":"exact"}],"termid":"GO:0033672"}


id: PBO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-fructofuranosidase (predicted)","termid":"PBO:0002028"}


id: PBO:0029349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA_level","termid":"PBO:0029349"}


id: PBO:0071280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 3","termid":"PBO:0071280"}


id: GO:1905378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a D-galactose stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:26261574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"},{"relation_name":"is_a","term_name":"response to D-galactose","termid":"GO:1905377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to D-galactose","synonyms":[{"name":"cellular response to D-Gal","type":"exact"},{"name":"cellular response to D-galacto-hexose","type":"exact"}],"termid":"GO:1905378"}


id: PBO:0081012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 46","termid":"PBO:0081012"}


id: PBO:0068069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 374","termid":"PBO:0068069"}


id: PBO:0085320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 4,5-bisphosphate 5-phosphatase; role in secretion; localizes to the endoplasmic reticulum via the C-terminal tail; lacks the Sac1 domain and proline-rich region found in the other 3 INP proteins","termid":"PBO:0085320"}


id: GO:0051930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of pain","termid":"GO:0051930"}


id: GO:0160203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein folding process that facilitates the import of a subset of soluble proteins into mitochondrial intermembrane space via disulfide bond formation.","definition_xrefs":["PMID:32936885","PMID:37159021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding","termid":"GO:0006457"},{"relation_name":"part_of","term_name":"protein import into mitochondrial intermembrane space","termid":"GO:0045041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0006810","GO:0006457","GO:0051604","GO:0010467","GO:0055085","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"mitochondrial disulfide relay system","synonyms":[{"name":"MIA pathway","type":"exact"},{"name":"mitochondrial intermembrane space assembly pathway","type":"exact"}],"termid":"GO:0160203"}


id: PBO:0069478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 745, pseudogene","termid":"PBO:0069478"}


id: GO:0036416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Prevention of degradation of tRNA molecules.","definition_xrefs":["GOC:bf","GOC:aa","PMID:20459084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA stability","termid":"GO:0036415"},{"relation_name":"is_a","term_name":"RNA stabilization","termid":"GO:0043489"},{"relation_name":"is_a","term_name":"negative regulation of tRNA catabolic process","termid":"GO:1902371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA stabilization","termid":"GO:0036416"}


id: PBO:0050426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H3","termid":"PBO:0050426"}


id: PBO:0039323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase, 12R type","termid":"PBO:0039323"}


id: PBO:0059379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 4","termid":"PBO:0059379"}


id: GO:0048201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles formed at the plasma membrane are directed to specific destinations in endosome membranes, mediated by molecules at the vesicle membrane and target membrane surfaces.","definition_xrefs":["GOC:jid","GOC:mah","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle targeting, plasma membrane to endosome","synonyms":[{"name":"plasma membrane to endosome targeting","type":"exact"}],"termid":"GO:0048201"}


id: PR:P40375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NAD-dependent malic enzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04249","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent malic enzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.12c","secondary_identifiers":["UniProtKB:P40375"],"synonyms":[{"name":"NAD-ME (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-maeA","type":"exact"}],"termid":"PR:P40375"}


id: PBO:0066921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 223","termid":"PBO:0066921"}


id: PBO:0055184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2608","termid":"PBO:0055184"}


id: GO:0004066
data:
  {"annotated_genes":["SJAG_04549","SJAG_02832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98264,106941],"is_not":false,"summary":null,"term":"GO:0004066"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate.","definition_xrefs":["RHEA:12228","EC:6.3.5.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"asparagine synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70599","MetaCyc:ASNSYNB-RXN"],"synonyms":[{"name":"AS","type":"related"},{"name":"AS-B activity","type":"related"},{"name":"L-aspartate:L-glutamine amido-ligase (AMP-forming)","type":"related"},{"name":"asparagine synthase (glutamine-hydrolysing)","type":"related"},{"name":"asparagine synthetase (glutamine-hydrolysing)","type":"related"},{"name":"asparagine synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"asparagine synthetase B activity","type":"related"},{"name":"glutamine-dependent asparagine synthetase activity","type":"related"}],"termid":"GO:0004066","terms_by_termid":{"GO:0004066":null}}


id: PBO:0056598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase 2","termid":"PBO:0056598"}


id: GO:0071814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein-lipid complex, any macromolecular complex that contains both protein and lipid molecules.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein-lipid complex binding","termid":"GO:0071814"}


id: PBO:0002708
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cofilin","termid":"PBO:0002708"}


id: PATO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000242 flinch reflex (obsolete PATO:0000242)","termid":"PATO:0000242"}


id: GO:0030517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axon outgrowth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of axonogenesis","termid":"GO:0050771"},{"relation_name":"negatively_regulates","term_name":"axon extension","termid":"GO:0048675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axon extension","synonyms":[{"name":"down regulation of axon extension","type":"exact"},{"name":"down-regulation of axon extension","type":"exact"},{"name":"downregulation of axon extension","type":"exact"},{"name":"inhibition of axon extension","type":"narrow"}],"termid":"GO:0030517"}


id: PBO:0056613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male-enhanced antigen 1","termid":"PBO:0056613"}


id: PBO:0041595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 6","termid":"PBO:0041595"}


id: PBO:0026679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_dithiothreitol","termid":"PBO:0026679"}


id: GO:0071792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bacillithiol, the alpha-anomeric glycoside of L-cysteinyl-D-glucosamine with L-malic acid. Bacillithiol, produced widely in the Firmicutes and sporadically in other bacterial lineages, is a low-molecular-weight thiol analogous to mycothiol in the Actinomycetes and glutathione in many species.","definition_xrefs":["PMID:20308541","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"bacillithiol metabolic process","synonyms":[{"name":"bacillithiol metabolism","type":"exact"}],"termid":"GO:0071792"}


id: GO:0071984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results an organism remaining in reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of diapause","termid":"GO:0071982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of reproductive diapause","termid":"GO:0071984"}


id: PBO:0110984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paqosome core subunit, TPR repeat protein, human RPAP3 ortholog","termid":"PBO:0110984"}


id: GO:0061222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesonephric mesenchymal cell population.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"},{"relation_name":"is_a","term_name":"kidney mesenchymal cell proliferation","termid":"GO:0072135"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchymal cell proliferation involved in mesonephros development","termid":"GO:0061222"}


id: PBO:0090024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination mediator Swi5","termid":"PBO:0090024"}


id: PBO:0039885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 2","termid":"PBO:0039885"}


id: PBO:0085390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane low glucose sensor, regulates glucose transport; high affinity sensor that contains 12 predicted transmembrane segments and a long C-terminal tail required for induction of hexose transporters; also senses fructose and mannose; SNF3 has a paralog, RGT2, that arose from the whole genome duplication","termid":"PBO:0085390"}


id: PBO:0029807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions","termid":"PBO:0029807"}


id: PBO:0078128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 10","termid":"PBO:0078128"}


id: FYPO:0004671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the vacuole is abolished when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to vacuole during nitrogen starvation","synonyms":[{"name":"abolished protein localisation to vacuole during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to vacuole during nitrogen depletion","type":"exact"},{"name":"abolished protein localization to vacuole during nitrogen deprivation","type":"exact"},{"name":"protein localization to vacuole abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004671"}


id: PBO:0070457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4","termid":"PBO:0070457"}


id: GO:0051019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitogen-activated protein kinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"mitogen-activated protein kinase binding","synonyms":[{"name":"MAP kinase binding","type":"exact"},{"name":"MAP-kinase anchoring activity","type":"related"},{"name":"MAPK binding","type":"exact"}],"termid":"GO:0051019"}


id: GO:1905602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor-mediated endocytosis involved in cholesterol transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22848640","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular cholesterol transport","termid":"GO:0032385"},{"relation_name":"is_a","term_name":"positive regulation of receptor-mediated endocytosis","termid":"GO:0048260"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:1905600"},{"relation_name":"positively_regulates","term_name":"receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:0090118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of receptor-mediated endocytosis involved in cholesterol transport","synonyms":[{"name":"activation of receptor-mediated endocytosis involved in cholesterol transport","type":"narrow"},{"name":"activation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"up regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"}],"termid":"GO:1905602"}


id: GO:0016749
data:
  {"annotated_genes":["SJAG_03961","SJAG_00097"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77280,91835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003870"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"succinyltransferase activity","termid":"GO:0016748"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_03961":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-succinyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016749","terms_by_termid":{"GO:0003870":null}}


id: PBO:0039037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 14, pseudogene","termid":"PBO:0039037"}


id: SO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes an enzymatic RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enzymatic_RNA_gene","synonyms":[{"name":"enzymatic RNA gene","type":"exact"}],"termid":"SO:0002180"}


id: GO:0019030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form an icosahedron, a solid with 20 faces and 12 vertices. Icosahedral capsids have 12 pentamers plus 10(T-1) hexamers, where T is the triangulation number. Tobacco satellite necrosis virus has such a capsid structure.","definition_xrefs":["ISBN:0198506732","VZ:885","GOC:bm","ISBN:071673706X","Wikipedia:Capsid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid","synonyms":[{"name":"quasispherical viral capsid","type":"exact"}],"termid":"GO:0019030"}


id: PBO:0036469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrof olatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase Ade9","termid":"PBO:0036469"}


id: MOD:01008
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a benzyl (phenylmethyl) group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}


id: FYPO:0007211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring assembly begins earlier than normal. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["PomBase:mah","PMID:15184401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0004803","FYPO:0001320"],"is_obsolete":false,"name":"premature actomyosin contractile ring assembly","synonyms":[{"name":"advanced actomyosin contractile ring assembly","type":"exact"},{"name":"premature actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"premature actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"premature actomyosin contractile ring formation","type":"related"},{"name":"premature contractile ring assembly","type":"exact"},{"name":"premature cytokinetic contractile ring assembly","type":"exact"},{"name":"premature mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"premature mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0007211"}


id: PBO:0028622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2-type_prespliceosome_assembly","termid":"PBO:0028622"}


id: GO:0043558
data:
  {"annotated_genes":["SJAG_00786","SJAG_02592","SJAG_04873","SJAG_01942","SJAG_00690","SJAG_03869","SJAG_00169","SJAG_04383","SJAG_02072"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111787,105817,88842,88539,90412,95421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[99441,100084,91274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of translation initiation in response to stress","type":"exact"}],"termid":"GO:0043558","terms_by_termid":{"GO:1990611":null,"GO:1990625":null}}


id: PBO:0040522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AZGP1 pseudogene 2","termid":"PBO:0040522"}


id: GO:0061000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of dendritic spine development","termid":"GO:0060998"},{"relation_name":"negatively_regulates","term_name":"dendritic spine development","termid":"GO:0060996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic spine development","termid":"GO:0061000"}


id: FYPO:0002313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ergosterol measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular ergosterol level","termid":"FYPO:0002321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"ergosterol absent from cell","synonyms":[{"name":"ergosterol absent from cell during mitotic cell cycle","type":"related"},{"name":"ergosterol absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002313"}


id: GO:0002651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"},{"relation_name":"positively_regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction to self antigen","synonyms":[{"name":"activation of tolerance induction to self antigen","type":"narrow"},{"name":"stimulation of tolerance induction to self antigen","type":"narrow"},{"name":"up regulation of tolerance induction to self antigen","type":"exact"},{"name":"up-regulation of tolerance induction to self antigen","type":"exact"},{"name":"upregulation of tolerance induction to self antigen","type":"exact"}],"termid":"GO:0002651"}


id: PBO:0071639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 3","termid":"PBO:0071639"}


id: PBO:0041426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 48","termid":"PBO:0041426"}


id: GO:1901735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (R)-mevalonic acid.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(R)-mevalonic acid metabolic process","synonyms":[{"name":"(R) mevalonate metabolism","type":"exact"},{"name":"(R)-mevalonic acid metabolism","type":"exact"}],"termid":"GO:1901735"}


id: PBO:0079394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 1","termid":"PBO:0079394"}


id: PBO:0089471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-bS1m","termid":"PBO:0089471"}


id: FYPO:0000161
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}],"single_locus_phenotype":[{"annotations":[115624,115566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115530,115579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring assembly is abnormal. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["GO:1903475","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000631","FYPO:0005447","FYPO:0004803","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormal actomyosin contractile ring assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","sty1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"abnormal actomyosin contractile ring formation","type":"related"},{"name":"abnormal contractile ring assembly","type":"exact"},{"name":"abnormal cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic ring assembly","type":"related"},{"name":"abnormal cytokinetic ring formation","type":"related"},{"name":"abnormal mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0000161","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000248":null,"FYPO:0000729":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: GO:0044020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H4)-arginine (position 3) = S-adenosyl-L-homocysteine + (histone H4)-N-methyl-arginine (position 3). This reaction is the addition of a methyl group to the arginine residue at position 3 of histone H4, producing histone H4R3me.","definition_xrefs":["GOC:mah","PMID:17898714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H4 methyltransferase activity","termid":"GO:0140939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740","GO:0140096","GO:0008276"],"is_obsolete":false,"name":"histone H4R3 methyltransferase activity","secondary_identifiers":["EC:2.1.1.320","EC:2.1.1.319"],"synonyms":[{"name":"histone H4KR3 methylation","type":"exact"},{"name":"histone H4R3 arginine methylase activity","type":"exact"},{"name":"histone methylase activity (H4-R3 specific)","type":"exact"},{"name":"histone methyltransferase activity (H4-R3 specific)","type":"exact"},{"name":"histone-arginine N-methyltransferase activity (H4-R3 specific)","type":"exact"}],"termid":"GO:0044020"}


id: FYPO:0001860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a higher frequency than normal during the meiotic cell cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss","termid":"FYPO:0001859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased minichromosome loss during meiotic cell cycle","synonyms":[{"name":"increased minichromosome loss during meiosis","type":"related"},{"name":"meiotic minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001860"}


id: GO:0030875
data:
  {"annotated_genes":["SJAG_05237","SJAG_04210","SJAG_05180","SJAG_03603"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95364,97260,111447,115650],"is_not":false,"summary":null,"term":"GO:0030875"}]},"cv_name":"cellular_component","definition":"Any of the tandem arrays of rDNA localized at the periphery of the nucleus and protruding into the nucleolus, and associated proteins. May be visible as a single or double spot by DAPI staining.","definition_xrefs":["PMID:1629244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolar chromatin","termid":"GO:0030874"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03603":null,"SJAG_04210":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005730","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"rDNA protrusion","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"synonyms":[{"name":"ribosomal DNA protrusion","type":"exact"}],"termid":"GO:0030875","terms_by_termid":{"GO:0030875":null}}


id: PBO:0004425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptin (predicted)","termid":"PBO:0004425"}


id: PBO:0081084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 14","termid":"PBO:0081084"}


id: GO:0008991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a signal peptide from a protein precursor by a serine endopeptidase mechanism.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete serine-type signal peptidase activity (obsolete GO:0008991)","synonyms":[{"name":"serine-type signal peptidase activity","type":"exact"}],"termid":"GO:0008991"}


id: GO:0102916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + (+)-piperitol + NADPH + O2 = (+)-sesamin + NADP + 2 H2O.","definition_xrefs":["GOC:pz","PMID:16785429"],"gene_count":0,"genotype_count":0,"name":"obsolete sesamin synthase activity (obsolete GO:0102916)","termid":"GO:0102916"}


id: PBO:0086969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p; small single-membrane span proteolipid; forms unique helix and positively charged cytoplasmic domain that is able to specifically segregate phosphatidylserines; PMP1 has a paralog, PMP2, that arose from the whole genome duplication","termid":"PBO:0086969"}


id: GO:0035783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment CD4-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:BHF","GOC:pr","CL:0000624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell costimulation","termid":"GO:0031295"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell costimulation","synonyms":[{"name":"CD4-positive, alpha beta T cell costimulation","type":"exact"}],"termid":"GO:0035783"}


id: GO:0072138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population of the ureteric bud, that contributes to ureteric bud development.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"is_a","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation involved in ureteric bud development","synonyms":[{"name":"ureteric bud mesenchymal cell proliferation","type":"broad"}],"termid":"GO:0072138"}


id: GO:0110051
data:
  {"annotated_genes":["SJAG_03669"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113805],"is_not":false,"summary":null,"term":"GO:0110051"}]},"cv_name":"biological_process","definition":"A cellular process that, through single- or multi-step enzymatic reactions, repairs useless or toxic endogenous compounds, formed as by-products of primary metabolism, by converting them into useful metabolites.","definition_xrefs":["PMID:28373563","PMID:23334546","GOC:ka"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03669":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metabolite repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110051","terms_by_termid":{"GO:0110051":null}}


id: PBO:0077955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 12-2","termid":"PBO:0077955"}


id: PBO:0052485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 10","termid":"PBO:0052485"}


id: PBO:0057524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 642a","termid":"PBO:0057524"}


id: PBO:0047898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q21.2)","termid":"PBO:0047898"}


id: PBO:0087896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; component of the heteromeric Ino2p/Ino4p basic helix-loop-helix transcription activator that binds inositol/choline-responsive elements (ICREs), required for derepression of phospholipid biosynthetic genes in response to inositol depletion; involved in diauxic shift","termid":"PBO:0087896"}


id: PBO:0003471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis- trans isomerase Cyp3","termid":"PBO:0003471"}


id: GO:0030866
data:
  {"annotated_genes":["SJAG_01805","SJAG_02245","SJAG_04001","SJAG_02511","SJAG_02700","SJAG_04052","SJAG_01894","SJAG_04621","SJAG_02864","SJAG_00700","SJAG_04644","SJAG_00228","SJAG_00521","SJAG_04982","SJAG_03705","SJAG_02592","SJAG_03379","SJAG_03146","SJAG_00082","SJAG_01384","SJAG_01143","SJAG_00279","SJAG_04100","SJAG_01732","SJAG_04465","SJAG_03703","SJAG_04498","SJAG_00649","SJAG_01964","SJAG_02075","SJAG_01268","SJAG_03086","SJAG_04887","SJAG_03119","SJAG_00938","SJAG_02431","SJAG_03596","SJAG_04703","SJAG_01665","SJAG_03048","SJAG_00268","SJAG_02228","SJAG_04077","SJAG_04597","SJAG_03088","SJAG_04886","SJAG_00661","SJAG_03025","SJAG_03045","SJAG_04930","SJAG_03044","SJAG_02177","SJAG_02831"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96260,99426,114094],"is_not":false,"summary":null,"term":"GO:0030866"},{"annotations":[103292,86704,115039,95770,95949,90841,85858,84185,107169,99367,107824,93993,99178,106837,108323,108346,99423,101281,111049,114678],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000147"},{"annotations":[101282,94916,93794,84290,91338,94979,101264],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044396"},{"annotations":[106946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000915"},{"annotations":[94371,85361,94106,104274],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[106947,101267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044837"},{"annotations":[93722,93797,115531,108029,88350,108464,88611,88565,98525,94983,98669,113221,114644,97355,114069,114824,91339,94107,84294,93998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[94108],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[114070,91340,93723,94109,84295,98526,94984,108465,97023,96792],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[98469],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[90456,86031],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[89852,90422,115626],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.","definition_xrefs":["GOC:pf","GOC:jl","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"cortical cytoskeleton organization","termid":"GO:0030865"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00521":null,"SJAG_00649":null,"SJAG_00661":null,"SJAG_00700":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02177":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02431":null,"SJAG_02511":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02831":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03044":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03146":null,"SJAG_03379":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_03705":null,"SJAG_04001":null,"SJAG_04052":null,"SJAG_04077":null,"SJAG_04100":null,"SJAG_04465":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04644":null,"SJAG_04703":null,"SJAG_04886":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"cortical actin cytoskeleton organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"secondary_identifiers":["GO:0033109"],"synonyms":[{"name":"actin cortex stabilization","type":"exact"},{"name":"cortical actin cytoskeleton organisation","type":"exact"},{"name":"cortical actin cytoskeleton organization and biogenesis","type":"related"},{"name":"cortical actin cytoskeleton stabilization","type":"exact"},{"name":"cortical resistance","type":"related"}],"termid":"GO:0030866","terms_by_termid":{"GO:0000147":null,"GO:0000915":null,"GO:0030866":null,"GO:0044396":null,"GO:0044837":null,"GO:0071520":null,"GO:0120306":null,"GO:1902404":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: GO:1904151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microglial cell mediated cytotoxicity.","definition_xrefs":["GOC:nc","PMID:19100238","GO_REF:0000058","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated cytotoxicity","termid":"GO:0001912"},{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"regulation of microglial cell mediated cytotoxicity","termid":"GO:1904149"},{"relation_name":"positively_regulates","term_name":"microglial cell mediated cytotoxicity","termid":"GO:0090634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microglial cell mediated cytotoxicity","synonyms":[{"name":"activation of microglial cell mediated cytotoxicity","type":"narrow"},{"name":"up regulation of microglial cell mediated cytotoxicity","type":"exact"},{"name":"up-regulation of microglial cell mediated cytotoxicity","type":"exact"},{"name":"upregulation of microglial cell mediated cytotoxicity","type":"exact"}],"termid":"GO:1904151"}


id: PBO:0082720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex involved in transcription elongation; binds to and modulates the activity of RNA polymerases I and II; required for expression of a subset of genes, including cell cycle-regulated genes; involved in SER3 repression by helping to maintain SRG1 transcription-dependent nucleosome occupancy; homolog of human PD2/hPAF1","termid":"PBO:0082720"}


id: PBO:0027527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_binucleate_aseptate_cell_with_mitotic_cell_cycle_arrest_in_G2_before_cell_separation","termid":"PBO:0027527"}


id: PBO:0044185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase 1","termid":"PBO:0044185"}


id: PBO:0108702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RasGAP Gap1","termid":"PBO:0108702"}


id: GO:0030724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fusome of testicular cells, an organelle derived from the spectrosome.","definition_xrefs":["ISBN:0879694238","GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusome organization","termid":"GO:0045478"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"testicular fusome organization","synonyms":[{"name":"testicular fusome organisation","type":"exact"},{"name":"testicular fusome organization and biogenesis","type":"related"}],"termid":"GO:0030724"}


id: PBO:0087580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the anaphase-promoting complex/cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; required for sporulation; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087580"}


id: PATO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000106 acid sensitivity (obsolete PATO:0000106)","termid":"PATO:0000106"}


id: CHEBI:45979
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiabendazole","termid":"CHEBI:45979"}


id: PBO:0040429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V0E2 antisense RNA 1","termid":"PBO:0040429"}


id: PBO:0073785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 5","termid":"PBO:0073785"}


id: GO:0045854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bicoid mRNA localization","termid":"GO:0008359"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of intracellular mRNA localization","termid":"GO:1904582"},{"relation_name":"positively_regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bicoid mRNA localization","synonyms":[{"name":"activation of bicoid mRNA localization","type":"narrow"},{"name":"positive regulation of bicoid mRNA localisation","type":"exact"},{"name":"stimulation of bicoid mRNA localization","type":"narrow"},{"name":"up regulation of bicoid mRNA localization","type":"exact"},{"name":"up-regulation of bicoid mRNA localization","type":"exact"},{"name":"upregulation of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045854"}


id: GO:1904377
data:
  {"annotated_genes":["SJAG_00030","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[100772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903078"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell periphery.","definition_xrefs":["GOC:TermGenie","PMID:18216290","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"positively_regulates","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell periphery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein localization to cell periphery","type":"narrow"},{"name":"up regulation of protein localization to cell periphery","type":"exact"},{"name":"up-regulation of protein localization to cell periphery","type":"exact"},{"name":"upregulation of protein localization to cell periphery","type":"exact"}],"termid":"GO:1904377","terms_by_termid":{"GO:0120047":null,"GO:1903078":null}}


id: PBO:0046596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 6","termid":"PBO:0046596"}


id: PBO:0040484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7","termid":"PBO:0040484"}


id: PBO:0082823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved nuclear RNA-binding protein; specifically binds to transcribed chromatin in a THO- and RNA-dependent manner, genetically interacts with shuttling hnRNP NAB2; overproduction suppresses transcriptional defect caused by hpr1 mutation","termid":"PBO:0082823"}


id: MOD:00572
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:343","PubMed:15174056","PubMed:15828771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized arginine biotinylated with biotin hydrazide","synonyms":[{"name":"Argbiotinhydrazide","type":"related"},{"name":"oxidized Arginine biotinylated with biotin hydrazide","type":"related"}],"termid":"MOD:00572"}


id: GO:0016886
data:
  {"annotated_genes":["SJAG_00198","SJAG_02527","SJAG_00956"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88588,110064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003910"},{"annotations":[88589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003909"},{"annotations":[86679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003972"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of two molecules, or two groups within a single molecule, via a phosphoric ester bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.5.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00956":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"ligase activity, forming phosphoric ester bonds","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016886","terms_by_termid":{"GO:0003909":null,"GO:0003910":null,"GO:0003972":null}}


id: PBO:0078732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 5-1","termid":"PBO:0078732"}


id: SO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a CDS.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_region","synonyms":[{"name":"CDS region","type":"exact"}],"termid":"SO:0000851"}


id: PBO:0089846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor IF-2Mt/Mti2","termid":"PBO:0089846"}


id: PBO:0012310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutase (predicted)","termid":"PBO:0012310"}


id: PBO:0083424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF STP3/YLR375W","termid":"PBO:0083424"}


id: PR:O94594
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.04 gene.","definition_xrefs":["UniProtKB:O94594","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.04","synonyms":[{"name":"Spom972h-SPCC622.04","type":"exact"}],"termid":"PR:O94594"}


id: PBO:0048320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 31","termid":"PBO:0048320"}


id: FYPO:0005989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during conjugation with cellular fusion. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization during mating","synonyms":[{"name":"abnormal cellular protein localisation during mating","type":"exact"},{"name":"abnormal cellular protein localization during mating","type":"exact"},{"name":"abnormal protein localisation during mating","type":"exact"},{"name":"abnormal protein localization during conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0005989"}


id: GO:1900265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of substance P receptor binding.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of substance P receptor binding","synonyms":[{"name":"regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"regulation of substance P receptor ligand","type":"narrow"}],"termid":"GO:1900265"}


id: PBO:0048624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric inhibitory polypeptide","termid":"PBO:0048624"}


id: PBO:0070548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 14","termid":"PBO:0070548"}


id: GO:2000093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesonephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"regulates","term_name":"mesonephric nephron tubule epithelial cell differentiation","termid":"GO:0061265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesonephric nephron tubule epithelial cell differentiation","termid":"GO:2000093"}


id: PBO:0080733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing oxidoreductase","termid":"PBO:0080733"}


id: PBO:0071482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 23","termid":"PBO:0071482"}


id: GO:0072198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population of the ureter, that contributes to ureter development.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"part_of","term_name":"ureter development","termid":"GO:0072189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation involved in ureter development","synonyms":[{"name":"ureter mesenchymal cell proliferation","type":"related"},{"name":"ureteral mesenchymal cell proliferation","type":"related"}],"termid":"GO:0072198"}


id: PBO:0052948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte differentiation associated protein","termid":"PBO:0052948"}


id: GO:0006266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA ligation","termid":"GO:0006266"}


id: PBO:0041329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 83","termid":"PBO:0041329"}


id: PBO:0077235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 1 pseudogene 1","termid":"PBO:0077235"}


id: PBO:0029864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_localization_during_mitosis","termid":"PBO:0029864"}


id: GO:1903992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein stabilization.","definition_xrefs":["GOC:TermGenie","PMID:18573880","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein stabilization (obsolete GO:1903992)","synonyms":[{"name":"regulation of lysosomal protein stabilization","type":"narrow"},{"name":"regulation of positive regulation of protein stability","type":"exact"},{"name":"regulation of protein sequestering","type":"related"},{"name":"regulation of protein stabilization","type":"exact"},{"name":"regulation of protein stabilization activity","type":"related"}],"termid":"GO:1903992"}


id: PBO:0113161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp90 chaperone; functionally redundant with Hsc82p; required for pheromone signaling; negative regulator of the Hsf1p-dependent heat shock response with Cpr7p; docks with Tom70p for mitochondrial preprotein delivery; promotes telomerase DNA binding, nucleotide addition; promotes solubility of chaperone-substrate complexes; DNA damage induced nuclear import is Aha1p dependent; protein abundance increases in response to DNA replication stress; human homolog, HSP90AB1, complements null mutant","termid":"PBO:0113161"}


id: GO:0051738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to xanthophylls, any of several neutral yellow to orange carotenoid pigments containing oxygen.","definition_xrefs":["ISBN:0122146743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid binding","termid":"GO:0019840"},{"relation_name":"is_a","term_name":"pigment binding","termid":"GO:0031409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"xanthophyll binding","termid":"GO:0051738"}


id: PBO:0069442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 707, pseudogene","termid":"PBO:0069442"}


id: GO:0031563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of the mating projection in unicellular fungi exposed to mating pheromone.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"mating projection tip","termid":"GO:0043332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mating projection tip polarisome","termid":"GO:0031563"}


id: PBO:0036305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS family ribosome assembly protein Sdo1 (predicted)","termid":"PBO:0036305"}


id: PBO:0059632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCH2 pseudogene 4","termid":"PBO:0059632"}


id: PBO:0013794
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinates updated from 3789585..3789948 to 3789400..3789948","termid":"PBO:0013794"}


id: GO:0047939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulonate + NADP+ = D-glucuronate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.19","RHEA:14909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-glucuronate reductase activity","secondary_identifiers":["Reactome:R-HSA-5661256","KEGG_REACTION:R01481","MetaCyc:GLUCURONATE-REDUCTASE-RXN"],"synonyms":[{"name":"D-glucuronate dehydrogenase activity","type":"related"},{"name":"D-glucuronate reductase activity","type":"narrow"},{"name":"NADP-L-gulonate dehydrogenase activity","type":"related"},{"name":"TPN-L-gulonate dehydrogenase activity","type":"related"},{"name":"aldehyde reductase II activity","type":"related"},{"name":"glucuronate dehydrogenase activity","type":"related"},{"name":"glucuronate reductase activity","type":"exact"}],"termid":"GO:0047939"}


id: PBO:0049611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 14","termid":"PBO:0049611"}


id: PBO:0081544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF460 antisense RNA 1","termid":"PBO:0081544"}


id: GO:0034206
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex formed by the association of a distinct set of general and specific transcription factors with a region of enhancer DNA. The cooperative assembly of an enhanceosome confers specificity of transcriptional regulation.","definition_xrefs":["PMID:11250145","PMID:17574024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"enhanceosome","secondary_identifiers":["Wikipedia:Enhanceosome"],"termid":"GO:0034206"}


id: GO:2000836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of androgen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of androgen secretion","termid":"GO:2000834"},{"relation_name":"positively_regulates","term_name":"androgen secretion","termid":"GO:0035935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of androgen secretion","termid":"GO:2000836"}


id: PBO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"new gene","termid":"PBO:0000082"}


id: PBO:0090653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor GTPase Guf1","termid":"PBO:0090653"}


id: GO:1990948
data:
  {"annotated_genes":["SJAG_01515","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94779,111731],"is_not":false,"summary":null,"term":"GO:1990948"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a ubiquitin ligase.","definition_xrefs":["GOC:dph","GOC:vw","PMID:21389117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-protein transferase inhibitor activity","termid":"GO:0055105"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01515":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0140678","GO:0004857","GO:0098772"],"is_obsolete":false,"name":"ubiquitin ligase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061637","GO:0090645"],"synonyms":[{"name":"APC-Cdc20 complex inhibitor activity","type":"narrow"},{"name":"mitotic anaphase-promoting complex inhibitor activity","type":"narrow"}],"termid":"GO:1990948","terms_by_termid":{"GO:1990948":null}}


id: SO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intronic splicing regulatory element that functions to recruit trans acting splicing factors suppress the transcription of the gene or genes they control.","definition_xrefs":["PMID:23241926","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silencer","termid":"SO:0000625"},{"relation_name":"part_of","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic_splicing_silencer","synonyms":[{"name":"ISS","type":"exact"},{"name":"intronic splicing silencer","type":"exact"}],"termid":"SO:0002056"}


id: PBO:0002199
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.14","termid":"PBO:0002199"}


id: PBO:0063285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 11","termid":"PBO:0063285"}


id: PR:Q9UT44
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-glutamyl phosphate reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00398","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyl phosphate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.11","secondary_identifiers":["UniProtKB:Q9UT44"],"synonyms":[{"name":"GPR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GSA dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-proA","type":"exact"},{"name":"glutamate-5-semialdehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamyl-gamma-semialdehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT44"}


id: PATO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000265 relative visual_ability (obsolete PATO:0000265)","termid":"PATO:0000265"}


id: PBO:0052578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinocilin","termid":"PBO:0052578"}


id: PBO:0052905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-2","termid":"PBO:0052905"}


id: SO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion from the Line1 family of mobile elements.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L1_LINE_retrotransposon","termid":"SO:0002272"},{"relation_name":"is_a","term_name":"mobile_element_insertion","termid":"SO:0001837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE1_insertion","synonyms":[{"name":"line1 insertion","type":"related"}],"termid":"SO:0002064"}


id: PBO:0012850
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial nephritis, karyomegalic","termid":"PBO:0012850"}


id: PBO:0088512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family zinc finger, PHD-type","termid":"PBO:0088512"}


id: GO:0035984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trichostatin A stimulus.","definition_xrefs":["PMID:20181743","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to trichostatin A","termid":"GO:0035983"},{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to trichostatin A","termid":"GO:0035984"}


id: GO:0003170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a heart valve over time, from its formation to the mature structure. A heart valve is a structure that restricts the flow of blood to different regions of the heart and forms from an endocardial cushion.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve development","synonyms":[{"name":"cardiac valve development","type":"exact"}],"termid":"GO:0003170"}


id: PBO:0078238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 20-1","termid":"PBO:0078238"}


id: PBO:0068833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 71, pseudogene","termid":"PBO:0068833"}


id: PATO:0001011
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001011 absolute intensity (obsolete PATO:0001011)","termid":"PATO:0001011"}


id: PBO:0009980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm4/Cdc21","termid":"PBO:0009980"}


id: MOD:00525
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:157","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex2HexNAc2Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(2)HexNAc(2)Pent(1)","type":"related"},{"name":"Hex2HexNAc2Pent1","type":"related"}],"termid":"MOD:00525"}


id: PBO:0059337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S7 pseudogene 2","termid":"PBO:0059337"}


id: PBO:0070061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 18, pseudogene","termid":"PBO:0070061"}


id: PR:Q2L4W6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q2L4W6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.02","synonyms":[{"name":"Spom972h-spo5","type":"exact"},{"name":"meiotic RNA-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 12 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q2L4W6"}


id: BFO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obsolete_preceded_by","termid":"BFO:0000060"}


id: PBO:0054060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1404","termid":"PBO:0054060"}


id: PBO:0081423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280A","termid":"PBO:0081423"}


id: PR:Q9HE09
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fml2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HE09"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase fml2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.04","synonyms":[{"name":"FANCM-like protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fml2","type":"exact"}],"termid":"PR:Q9HE09"}


id: GO:1901516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aspyridone A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"aspyridone A metabolic process","synonyms":[{"name":"aspyridone A metabolism","type":"exact"}],"termid":"GO:1901516"}


id: GO:0015945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methanol, CH3-OH, a colorless, flammable, mobile, poisonous liquid, widely used as a solvent.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methanol metabolic process","synonyms":[{"name":"methanol metabolism","type":"exact"}],"termid":"GO:0015945"}


id: PBO:0078942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 9-1","termid":"PBO:0078942"}


id: PBO:0089703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine 5'-nucleotidase","termid":"PBO:0089703"}


id: GO:0045313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a rhabdomere membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane biogenesis","termid":"GO:0044091"},{"relation_name":"part_of","term_name":"rhabdomere development","termid":"GO:0042052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"rhabdomere membrane biogenesis","termid":"GO:0045313"}


id: PR:A6X970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C4.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C4.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.04c","synonyms":[{"name":"Spom972h-SPAC23C4.04c","type":"exact"}],"termid":"PR:A6X970"}


id: PBO:0008425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, implicated in vesicle-mediated transport","termid":"PBO:0008425"}


id: PBO:0000880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn2","termid":"PBO:0000880"}


id: GO:0048290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to biosynthesis of an IgA isotype, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and one of the IgA constant region gene segments in the immunoglobulin heavy chain locus.","definition_xrefs":["PMID:12370374","ISBN:0781735149","PMID:9186655","PMID:2113175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0010467","GO:0006259"],"is_obsolete":false,"name":"isotype switching to IgA isotypes","synonyms":[{"name":"class switching to IgA isotypes","type":"exact"},{"name":"isotype switch recombination to IgA isotypes","type":"exact"}],"termid":"GO:0048290"}


id: GO:1905561
data:
  {"annotated_genes":["SJAG_00718","SJAG_03048","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85682,98478,112862],"is_not":false,"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of kinetochore assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18765790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of kinetochore assembly","termid":"GO:0090234"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"kinetochore assembly","termid":"GO:0051382"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of kinetochore assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901721"],"synonyms":[{"name":"activation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"activation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"activation of chromosome-kinetochore attachment","type":"narrow"},{"name":"activation of kinetochore assembly","type":"narrow"},{"name":"activation of kinetochore formation","type":"related"},{"name":"positive regulation of NMS complex assembly","type":"narrow"},{"name":"positive regulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"positive regulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"positive regulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"positive regulation of kinetochore formation","type":"related"},{"name":"up regulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"up regulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"up regulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"up regulation of kinetochore assembly","type":"exact"},{"name":"up regulation of kinetochore formation","type":"related"},{"name":"up-regulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"up-regulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"up-regulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"up-regulation of kinetochore assembly","type":"exact"},{"name":"up-regulation of kinetochore formation","type":"related"},{"name":"upregulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"upregulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"upregulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"upregulation of kinetochore assembly","type":"exact"},{"name":"upregulation of kinetochore formation","type":"related"}],"termid":"GO:1905561","terms_by_termid":{"GO:1905561":null}}


id: PBO:0047702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin 1","termid":"PBO:0047702"}


id: GO:0071305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin D stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin D","termid":"GO:0033280"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin D","synonyms":[{"name":"cellular response to calciferol","type":"exact"},{"name":"cellular response to cholecalciferol","type":"narrow"},{"name":"cellular response to ergocalciferol","type":"narrow"}],"termid":"GO:0071305"}


id: PBO:0071287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 10","termid":"PBO:0071287"}


id: GO:0036032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a neural crest cell physically separates from the rest of the neural tube.","definition_xrefs":["PMID:17076275","CL:0000333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"neural crest cell delamination","synonyms":[{"name":"neural crest cell emigration","type":"exact"},{"name":"neural crest cell individualization","type":"exact"},{"name":"neural crest cell segregation","type":"related"}],"termid":"GO:0036032"}


id: PBO:0044381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily D member 1, pseudogene","termid":"PBO:0044381"}


id: GO:0070791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cleistothecium over time, from its formation to the mature structure. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["ISBN:0471522295","PMID:17446882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium development","termid":"GO:0070791"}


id: PR:P78795
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit G that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02993","PANTHER:PTHR10352:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit G (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.03","secondary_identifiers":["UniProtKB:P78795"],"synonyms":[{"name":"Spom972h-EIF3G","type":"exact"},{"name":"eIF-3 RNA-binding subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3 p33 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3g (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 3 RNA-binding subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor eIF3 p33 subunit homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78795"}


id: GO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with urotensin II to initiate a change in cell activity.","definition_xrefs":["PMID:15102493","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"urotensin II receptor activity","termid":"GO:0001604"}


id: GO:2000182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of progesterone biosynthetic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"regulates","term_name":"progesterone biosynthetic process","termid":"GO:0006701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"regulation of progesterone biosynthetic process","synonyms":[{"name":"regulation of progesterone anabolism","type":"exact"},{"name":"regulation of progesterone biosynthesis","type":"exact"},{"name":"regulation of progesterone formation","type":"exact"},{"name":"regulation of progesterone synthesis","type":"exact"}],"termid":"GO:2000182"}


id: PBO:0062115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 14 pseudogene","termid":"PBO:0062115"}


id: PBO:0088582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S5","termid":"PBO:0088582"}


id: PR:P24487
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit alpha, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit alpha, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.14","secondary_identifiers":["UniProtKB:P24487"],"synonyms":[{"name":"Spom972h-ATP5A1","type":"exact"}],"termid":"PR:P24487"}


id: PBO:0071346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 4","termid":"PBO:0071346"}


id: PBO:0040449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10B (putative)","termid":"PBO:0040449"}


id: GO:0102729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 6-oxocampestanol + O2 + NADPH = cathasterone + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-oxocampestanol hydroxylase activity (obsolete GO:0102729)","termid":"GO:0102729"}


id: FYPO:0002338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is abnormal. The nuclear periphery is the portion of the nuclear lumen proximal to the inner nuclear membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to nuclear periphery","synonyms":[{"name":"abnormal protein localisation to nuclear periphery","type":"exact"},{"name":"abnormal protein localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0002338"}


id: PBO:0083605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential RPL28 gene encoding a large subunit ribosomal protein","termid":"PBO:0083605"}


id: GO:0032616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-13 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-13 production","secondary_identifiers":["GO:0072611","GO:0042231"],"synonyms":[{"name":"IL-13 production","type":"exact"},{"name":"interleukin-13 biosynthetic process","type":"narrow"},{"name":"interleukin-13 secretion","type":"narrow"}],"termid":"GO:0032616"}


id: PR:O14098
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD kinase subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.15","synonyms":[{"name":"CTD kinase subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTDK-I subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsk1","type":"exact"},{"name":"latrunculin sensitive kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14098"}


id: PBO:0071336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28","termid":"PBO:0071336"}


id: SO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal locus where complementary lncRNA and associated proteins accumulate at the corresponding lncRNA gene loci to tether homologous chromosome during chromosome pairing at meiosis I.","definition_xrefs":["PMID:31811152","PMID:22582262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"},{"relation_name":"member_of","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous_chromosome_recognition_and_pairing_locus","synonyms":[{"name":"homologous chromosome recognition and pairing locus","type":"exact"}],"termid":"SO:0002233"}


id: PBO:0030833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_N-methyl-N'-nitro-N-nitrosoguanidine","termid":"PBO:0030833"}


id: FYPO:0000509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export is normal (i.e. indistinguishable from wild type). Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleocytoplasmic transport","termid":"FYPO:0008138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear export","synonyms":[{"name":"normal nuclear export during mitotic cell cycle","type":"related"},{"name":"normal nuclear export during vegetative growth","type":"exact"},{"name":"nuclear export: normal","type":"related"}],"termid":"FYPO:0000509"}


id: PBO:0091498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific kinetochore regulator (Meikin) Moa1","termid":"PBO:0091498"}


id: PBO:0083888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of nuclear pore complex (NPC); also part of the NPC nuclear basket; contributes directly to nucleocytoplasmic transport; involved in regulation of transcription and mitosis; induces membrane tubulation, which may contribute to nuclear pore assembly; NUP53 has a paralog, ASM4, that arose from the whole genome duplication","termid":"PBO:0083888"}


id: FYPO:0001917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable, contains a single septum, has one nucleus in the septated cell, and is elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"elongated monoseptate vegetative cell","termid":"FYPO:0004979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000337","FYPO:0000641","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"inviable elongated mononucleate monoseptate vegetative cell","synonyms":[{"name":"inviable elongated mononucleate monoseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"inviable long monoseptate mononucleate cell","type":"exact"},{"name":"lethal; elongated mononucleate monoseptate vegetative cell","type":"exact"}],"termid":"FYPO:0001917"}


id: PBO:0038386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-epiphyte_of","termid":"PBO:0038386"}


id: GO:0061574
data:
  {"annotated_genes":["SJAG_00888","SJAG_05926"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99269,110520],"is_not":false,"summary":null,"term":"GO:0061574"}]},"cv_name":"cellular_component","definition":"A protein complex involved in regulation of mRNA processing and apoptosis. It binds to RNA in a sequence-independent manner and is recruited to the EJC prior to or during the splicing process. In humans the core proteins are RNPS1, SAP18 and ACIN1.","definition_xrefs":["GOC:dph","PMID:12665594","PMID:16314458","PMID:22388736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_05926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ASAP complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061574","terms_by_termid":{"GO:0061574":null}}


id: GO:0150159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-34 production.","definition_xrefs":["GOC:aruk","PMID:26754294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-34 production","termid":"GO:0150157"},{"relation_name":"negatively_regulates","term_name":"interleukin-34 production","termid":"GO:0150155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-34 production","secondary_identifiers":["GO:0150162"],"synonyms":[{"name":"negative regulation of interleukin-34 biosynthetic process","type":"narrow"}],"termid":"GO:0150159"}


id: GO:1902843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:24004945","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of netrin-activated signaling pathway","termid":"GO:1902841"},{"relation_name":"positively_regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of netrin-activated signaling pathway","synonyms":[{"name":"activation of netrin signaling pathway","type":"narrow"},{"name":"activation of netrin-activated signal transduction pathway","type":"narrow"},{"name":"activation of netrin-activated signaling pathway","type":"narrow"},{"name":"activation of netrin-activated signalling pathway","type":"narrow"},{"name":"activation of netrin-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of netrin signaling pathway","type":"exact"},{"name":"positive regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"positive regulation of netrin-activated signalling pathway","type":"exact"},{"name":"positive regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"up regulation of netrin signaling pathway","type":"exact"},{"name":"up regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"up regulation of netrin-activated signaling pathway","type":"exact"},{"name":"up regulation of netrin-activated signalling pathway","type":"exact"},{"name":"up regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"up-regulation of netrin signaling pathway","type":"exact"},{"name":"up-regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"up-regulation of netrin-activated signaling pathway","type":"exact"},{"name":"up-regulation of netrin-activated signalling pathway","type":"exact"},{"name":"up-regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"upregulation of netrin signaling pathway","type":"exact"},{"name":"upregulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"upregulation of netrin-activated signaling pathway","type":"exact"},{"name":"upregulation of netrin-activated signalling pathway","type":"exact"},{"name":"upregulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902843"}


id: PBO:0088076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease that cleaves ubiquitin-protein fusions; UBP9 has a paralog, UBP13, that arose from the whole genome duplication","termid":"PBO:0088076"}


id: GO:0043698
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which purines crystalize in reflective stacks. Iridosomes are synthesized in iridophore cells and are silver, gold or iridescent in appearance.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"iridosome","synonyms":[{"name":"reflecting platelet","type":"exact"}],"termid":"GO:0043698"}


id: GO:0018531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-6-hydroxynicotine + H2O + O2 = 6-hydroxypseudooxynicotine + H2O2.","definition_xrefs":["RHEA:11880","EC:1.5.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S)-6-hydroxynicotine oxidase activity","secondary_identifiers":["MetaCyc:S-6-HYDROXYNICOTINE-OXIDASE-RXN","KEGG_REACTION:R03202","UM-BBD_reactionID:r0478"],"synonyms":[{"name":"(S)-6-hydroxynicotine:oxygen oxidoreductase activity","type":"related"},{"name":"6-hydroxy-L-nicotine oxidase activity","type":"exact"},{"name":"6-hydroxy-L-nicotine:oxygen oxidoreductase activity","type":"related"},{"name":"L-6-hydroxynicotine oxidase activity","type":"exact"}],"termid":"GO:0018531"}


id: FYPO:0000304
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[115439,115427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000726"},{"annotations":[115438,115426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a stress. Typically, a cell population is deemed sensitive to a stress if cells in the population stop growing (and may die) when exposed to the stress at an intensity that allows a population of wild type cells to grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell population growth phenotype","termid":"FYPO:0001358"},{"relation_name":"is_a","term_name":"sensitive to stress","termid":"FYPO:0002549"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":3,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to stress during vegetative growth","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_02592","SJAG_04312"],"single_locus_genotype_uniquenames":["sty1delta","pka1delta","atf1delta"],"synonyms":[{"name":"decreased growth during cellular response to stress during vegetative growth","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to stress during vegetative growth","type":"exact"},{"name":"hypersensitive to stress during vegetative growth","type":"exact"},{"name":"sensitive to stress during mitotic cell cycle","type":"related"},{"name":"stress resistance: decreased during vegetative growth","type":"related"}],"termid":"FYPO:0000304","terms_by_termid":{"FYECO:0000078":null,"FYECO:0000207":null,"FYPO:0000087":null,"FYPO:0000271":null,"FYPO:0000726":null,"FYPO_EXT:0000001":null}}


id: GO:1900349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from methylamine","synonyms":[{"name":"down regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"down-regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"downregulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"inhibition of methane biosynthetic process from methylamine","type":"narrow"}],"termid":"GO:1900349"}


id: PBO:0059440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A10","termid":"PBO:0059440"}


id: PBO:0056005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4","termid":"PBO:0056005"}


id: PBO:0066851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 151","termid":"PBO:0066851"}


id: PATO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being free of curves, bends, or angles.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"straight","termid":"PATO:0002180"}


id: PBO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transporter (predicted)","termid":"PBO:0000583"}


id: GO:2001002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"positive regulation of hemicellulose catabolic process","termid":"GO:2000990"},{"relation_name":"is_a","term_name":"regulation of xylan catabolic process","termid":"GO:2001000"},{"relation_name":"positively_regulates","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of xylan catabolic process","synonyms":[{"name":"positive regulation of xylan breakdown","type":"exact"},{"name":"positive regulation of xylan catabolism","type":"exact"},{"name":"positive regulation of xylan degradation","type":"exact"}],"termid":"GO:2001002"}


id: PBO:0073806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 12","termid":"PBO:0073806"}


id: GO:0099149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocytosis of neurotransmitter receptor at the postsynapse.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"regulates","term_name":"postsynaptic neurotransmitter receptor internalization","termid":"GO:0098884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic neurotransmitter receptor internalization","synonyms":[{"name":"regulation of postsynaptic neurotransmitter receptor endocytosis","type":"exact"}],"termid":"GO:0099149"}


id: GO:0070238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A T cell apoptotic process that occurs towards the end of the expansion phase following the initial activation of mature T cells by antigen via the accumulation of pro-apoptotic gene products and decrease in anti-apoptotic gene products.","definition_xrefs":["GOC:mtg_apoptosis","ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"},{"relation_name":"part_of","term_name":"T cell homeostasis","termid":"GO:0043029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated T cell autonomous cell death","synonyms":[{"name":"ACAD","type":"broad"},{"name":"activated T cell apoptosis","type":"broad"},{"name":"activated T lymphocyte autonomous cell death","type":"exact"},{"name":"activated T-cell autonomous cell death","type":"exact"},{"name":"activated T-lymphocyte autonomous cell death","type":"exact"},{"name":"activated cell autonomous cell death","type":"broad"}],"termid":"GO:0070238"}


id: PBO:0073755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC2A9 antisense RNA 1","termid":"PBO:0073755"}


id: GO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"M phase","secondary_identifiers":["Wikipedia:M_phase"],"synonyms":[{"name":"M-phase","type":"exact"}],"termid":"GO:0000279"}


id: GO:0003432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a growth plate cartilage chondrocyte, where growth contributes to the shaping of the chondrocyte over time.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth plate cartilage chondrocyte growth","termid":"GO:0003430"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte morphogenesis","termid":"GO:0003429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth involved in growth plate cartilage chondrocyte morphogenesis","termid":"GO:0003432"}


id: PBO:0111057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase superfamily, implicated in transcription , RNA processing, or RNA export","termid":"PBO:0111057"}


id: PBO:0055283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2710","termid":"PBO:0055283"}


id: GO:1903633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of leucine-tRNA ligase activity.","definition_xrefs":["GOC:TermGenie","PMID:2280766","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of leucine-tRNA ligase activity (obsolete GO:1903633)","synonyms":[{"name":"regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"regulation of leucine translase activity","type":"exact"},{"name":"regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1903633"}


id: PBO:0081935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1E","termid":"PBO:0081935"}


id: PBO:0063636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFN2 antisense RNA 1","termid":"PBO:0063636"}


id: PR:Q8NKC0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.09 gene.","definition_xrefs":["UniProtKB:Q8NKC0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.09","synonyms":[{"name":"L-asparagine amidohydrolase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBPB21E7.09","type":"exact"}],"termid":"PR:Q8NKC0"}


id: GO:0080096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidate + a sterol = a sterol ester + a lysophosphatidate.","definition_xrefs":["PMID:16020547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphatidate-sterol O-acyltransferase activity","termid":"GO:0080096"}


id: PBO:0085843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; non-essential gene; upregulated by and required for tolerance to 4-Methylcyclohexane methanol; induced by treatment with 8-methoxypsoralen and UVA irradiation; contains 10-11 predicted transmembrane domains","termid":"PBO:0085843"}


id: PBO:0028640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_spore_population","termid":"PBO:0028640"}


id: PBO:0058226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4516","termid":"PBO:0058226"}


id: GO:1901096
data:
  {"annotated_genes":["SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagosome maturation.","definition_xrefs":["GOC:autophagy","PMID:10436019","PMID:21383079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"autophagosome maturation","termid":"GO:0097352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02433":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of autophagosome maturation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902452"],"synonyms":[{"name":"regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"regulation of autolysosome formation","type":"narrow"},{"name":"regulation of autophagic vacuole fusion","type":"exact"},{"name":"regulation of autophagosome fusion","type":"exact"},{"name":"regulation of fusion of autophagosome with lysosome","type":"narrow"}],"termid":"GO:1901096","terms_by_termid":{"GO:1901098":null}}


id: PBO:0003987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Ppa2","termid":"PBO:0003987"}


id: PBO:0068502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 89, pseudogene","termid":"PBO:0068502"}


id: GO:0051895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of focal adhesion assembly, the establishment and maturation of focal adhesions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-matrix adhesion","termid":"GO:0001953"},{"relation_name":"is_a","term_name":"regulation of focal adhesion assembly","termid":"GO:0051893"},{"relation_name":"is_a","term_name":"negative regulation of cell-substrate junction organization","termid":"GO:0150118"},{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"negatively_regulates","term_name":"focal adhesion assembly","termid":"GO:0048041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0044085","GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of focal adhesion assembly","synonyms":[{"name":"down regulation of focal adhesion formation","type":"exact"},{"name":"down-regulation of focal adhesion formation","type":"exact"},{"name":"downregulation of focal adhesion formation","type":"exact"},{"name":"inhibition of focal adhesion formation","type":"narrow"}],"termid":"GO:0051895"}


id: PBO:0061083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 2","termid":"PBO:0061083"}


id: GO:0060601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of an epithelium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting from an epithelium","termid":"GO:0060601"}


id: GO:0036342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a post-anal tail is generated and organized. A post-anal tail is a muscular region of the body that extends posterior to the anus. The post-anal tail may aid locomotion and balance.","definition_xrefs":["Wikipedia:Chordate","GOC:kmv","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-anal tail morphogenesis","termid":"GO:0036342"}


id: GO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the vacuolar membrane of a vacuole that retains the same shape regardless of cell cycle phase. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:krc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plant-type vacuole lumen","synonyms":[{"name":"lumen of vacuole with cell cycle-independent morphology","type":"exact"}],"termid":"GO:0000330"}


id: FYPO:0006417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the cleavage and rejoining of intermediates formed during meiotic recombination is longer than normal. All intermediates or a subset (such as a specific type or configuration of intermediate) may remain present for longer than normal.","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of resolution of meiotic recombination intermediates","synonyms":[{"name":"increased duration of joint molecule resolution","type":"exact"},{"name":"persistent meiotic joint molecules","type":"related"},{"name":"prolonged resolution of meiotic recombination intermediates","type":"exact"}],"termid":"FYPO:0006417"}


id: PBO:0003953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma2 (predicted)","termid":"PBO:0003953"}


id: PBO:0060554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin","termid":"PBO:0060554"}


id: PR:Q96VG0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.19 gene.","definition_xrefs":["UniProtKB:Q96VG0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16G5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.19","synonyms":[{"name":"Spom972h-SPBC16G5.19","type":"exact"}],"termid":"PR:Q96VG0"}


id: PBO:0014310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lisophospholipase family protein","termid":"PBO:0014310"}


id: PBO:0063367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCSK6 antisense RNA 1","termid":"PBO:0063367"}


id: PBO:0057652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1245a","termid":"PBO:0057652"}


id: PBO:0084714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane localized ATP-dependent DNA helicase; required for the maintenance of the mitochondrial genome; not required for mitochondrial transcription; has homology to E. coli helicase uvrD","termid":"PBO:0084714"}


id: GO:0099066
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the neuronal dense core vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of neuronal dense core vesicle membrane (obsolete GO:0099066)","termid":"GO:0099066"}


id: PBO:0053133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid droplet associated hydrolase","termid":"PBO:0053133"}


id: PBO:0057341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 526a-2","termid":"PBO:0057341"}


id: FYPO:0005617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during cellular response to bleomycin","termid":"FYPO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to bleomycin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to bleomycin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to bleomycin","type":"exact"}],"termid":"FYPO:0005617"}


id: PBO:0055613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3052","termid":"PBO:0055613"}


id: PBO:0070222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 155 pseudogene","termid":"PBO:0070222"}


id: PBO:0004580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Pgp2","termid":"PBO:0004580"}


id: GO:0047103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + NAD+ + 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestan-26-al = NADH + 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate.","definition_xrefs":["PMID:8496170"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-alpha,7-alpha,12-alpha-trihydroxycholestan-26-al 26-oxidoreductase activity (obsolete GO:0047103)","synonyms":[{"name":"3-alpha,7-alpha,12-alpha-trihydroxycholestan-26-al 26-dehydrogenase activity","type":"exact"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-al dehydrogenase activity","type":"exact"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-al:NAD+ 26-oxidoreductase activity","type":"exact"},{"name":"3alpha,7alpha,12alpha-trihydroxycholestan-26-al 26-dehydrogenase activity","type":"exact"},{"name":"3alpha,7alpha,12alpha-trihydroxycholestan-26-al 26-oxidoreductase activity","type":"exact"},{"name":"THAL-NAD oxidoreductase activity","type":"exact"},{"name":"cholestanetriol-26-al 26-dehydrogenase activity","type":"related"},{"name":"trihydroxydeoxycoprostanal dehydrogenase activity","type":"exact"}],"termid":"GO:0047103"}


id: PBO:0044282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 5","termid":"PBO:0044282"}


id: GO:0006325
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architecture","type":"exact"},{"name":"transcription-coupled nucleosome assembly","type":"narrow"}],"termid":"GO:0006325","terms_by_termid":{"GO:0000183":null,"GO:0006325":null,"GO:0006334":null,"GO:0006335":null,"GO:0006337":null,"GO:0006338":null,"GO:0010964":null,"GO:0030466":null,"GO:0031048":null,"GO:0031445":null,"GO:0031453":null,"GO:0031507":null,"GO:0031508":null,"GO:0031509":null,"GO:0033696":null,"GO:0034080":null,"GO:0034728":null,"GO:0040029":null,"GO:0045814":null,"GO:0045815":null,"GO:0060906":null,"GO:0061188":null,"GO:0070828":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:0140462":null,"GO:0140588":null,"GO:0140673":null,"GO:0140718":null,"GO:0140719":null,"GO:0140727":null,"GO:0140861":null,"GO:0140898":null,"GO:0141005":null,"GO:0141194":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: GO:0050912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of taste in which a gustatory chemical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception","termid":"GO:0050907"},{"relation_name":"part_of","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of taste","synonyms":[{"name":"perception of taste, detection of chemical stimulus","type":"exact"},{"name":"perception of taste, sensory detection of chemical stimulus","type":"exact"},{"name":"perception of taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of taste","type":"exact"},{"name":"sensory detection of taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of taste","type":"exact"},{"name":"sensory transduction of taste","type":"exact"},{"name":"taste perception","type":"broad"}],"termid":"GO:0050912"}


id: GO:1900527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of nucleus size that is involved in G1 to G0 transition.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:19366728"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nucleus size involved in G1 to G0 transition (obsolete GO:1900527)","synonyms":[{"name":"regulation of nuclear size involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nuclear size involved in G1/G0 transition","type":"exact"},{"name":"regulation of nuclear size involved in cell cycle quiescence","type":"related"},{"name":"regulation of nuclear size involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nuclear size involved in stationary phase","type":"related"},{"name":"regulation of nuclear volume involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nuclear volume involved in G1/G0 transition","type":"exact"},{"name":"regulation of nuclear volume involved in cell cycle quiescence","type":"related"},{"name":"regulation of nuclear volume involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nuclear volume involved in stationary phase","type":"related"},{"name":"regulation of nucleus size involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nucleus size involved in G1/G0 transition","type":"exact"},{"name":"regulation of nucleus size involved in cell cycle quiescence","type":"related"},{"name":"regulation of nucleus size involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nucleus size involved in stationary phase","type":"related"}],"termid":"GO:1900527"}


id: GO:0034025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-aspartate + [beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n = [beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-6-N-(beta-D-Asp)-L-Lys-D-Ala-D-Ala)]n + ADP + phosphate.","definition_xrefs":["EC:6.3.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"D-aspartate ligase activity","secondary_identifiers":["MetaCyc:6.3.1.12-RXN","RHEA:10752"],"synonyms":[{"name":"D-aspartate:[beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n ligase (ADP-forming) activity","type":"related"},{"name":"D-aspartic acid-activating enzyme","type":"related"},{"name":"UDP-MurNAc-pentapeptide:D-aspartate ligase activity","type":"related"},{"name":"aslfm","type":"related"}],"termid":"GO:0034025"}


id: SO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the 3' UTR of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_3UTR_variant","secondary_identifiers":["http://annovar.openbioinformatics.org/en/latest/user-guide/gene/"],"synonyms":[{"name":"ANNOVAR:ncRNA_UTR3","type":"exact"},{"name":"incomplete transcript 3UTR variant","type":"related"}],"termid":"SO:0002076"}


id: PBO:0025479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide dioxygenase Yhb1","termid":"PBO:0025479"}


id: PBO:0042794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 192","termid":"PBO:0042794"}


id: PBO:0028352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle_during_metaphase","termid":"PBO:0028352"}


id: GO:0102201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-trans-farnesyl diphosphate = (+)-2-epi-prezizaene + diphosphoric acid.","definition_xrefs":["GOC:pz","PMID:20201526","PMID:20175559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"(+)-2-epi-prezizaene synthase activity","secondary_identifiers":["MetaCyc:RXN-12117"],"termid":"GO:0102201"}


id: PBO:0090924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc16","termid":"PBO:0090924"}


id: PBO:0045751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein Barr virus integration site 1","termid":"PBO:0045751"}


id: PBO:0048765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid modulatory element binding protein 1","termid":"PBO:0048765"}


id: PBO:0049453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 7","termid":"PBO:0049453"}


id: GO:0007003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere binding (obsolete GO:0007003)","synonyms":[{"name":"telomere binding","type":"exact"}],"termid":"GO:0007003"}


id: PBO:0080717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and SOCS box containing 1","termid":"PBO:0080717"}


id: PBO:0052713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 5","termid":"PBO:0052713"}


id: FYPO:0000643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic DNA integrity checkpoint is abnormal. A DNA integrity checkpoint normally regulates cell cycle progression in response to changes in DNA structure. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle checkpoint","termid":"FYPO:0001704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic DNA integrity checkpoint","synonyms":[{"name":"abnormal mitotic DNA integrity checkpoint activation","type":"exact"}],"termid":"FYPO:0000643"}


id: GO:1990823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukemia inhibitory factor stimulus.","definition_xrefs":["PMID:12801913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to leukemia inhibitory factor","synonyms":[{"name":"response to LIF","type":"exact"},{"name":"response to CDF","type":"exact"},{"name":"response to cholinergic differentiation factor","type":"exact"}],"termid":"GO:1990823"}


id: GO:1904942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac ventricle formation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bc","GOC:BHF_miRNA","PMID:23575307","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"regulates","term_name":"cardiac ventricle formation","termid":"GO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac ventricle formation","termid":"GO:1904942"}


id: GO:0062242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"},{"relation_name":"part_of","term_name":"double membrane vesicle viral factory","termid":"GO:0039718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory membrane","synonyms":[{"name":"membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062242"}


id: PBO:0050294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine N-methyltransferase","termid":"PBO:0050294"}


id: GO:0004164
data:
  {"annotated_genes":["SJAG_02467"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113645],"is_not":false,"summary":null,"term":"GO:0004164"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-[(3S)-amino-3-carboxypropyl]-L-histidyl-[translation elongation factor 2] + 3 S-adenosyl-L-methionine = diphthine-[translation elongation factor 2] + 3 H+ + 3 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:20873788","RHEA:36415","PMID:15485916","PMID:3042777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008276","GO:0003824","GO:0016741","GO:0016740","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"diphthine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14326","EC:2.1.1.98","Reactome:R-HSA-5358484"],"synonyms":[{"name":"S-adenosyl-L-methionine:2-(3-carboxy-3-aminopropyl)-L-histidine methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:elongation factor 2 methyltransferase activity","type":"related"},{"name":"diphthine methyltransferase activity","type":"related"}],"termid":"GO:0004164","terms_by_termid":{"GO:0004164":null}}


id: PBO:0113535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein involved in termination of autophagy; regulates autophagy termination during persistent nitrogen starvation through Atg1p-mediated re-phosphorylation of Atg13p and PAS disassembly; type II membrane protein containing hydrophobic transmembrane region with N-terminal region oriented toward cytosol and C-terminus inside lumen; luminal domain is glycosylated; forms foci in vacuole membrane during starvation; targeted to vacuole via AP-3 pathway","termid":"PBO:0113535"}


id: SO:0001191
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of TNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"TNA","termid":"SO:0001190"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Threose_nucleic_acid"],"synonyms":[{"name":"TNA oligo","type":"exact"},{"name":"threose nucleic acid","type":"exact"}],"termid":"SO:0001191"}


id: PBO:0058915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12133","termid":"PBO:0058915"}


id: GO:0044008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of an organism from one host to another (or another place in the environment) by means of a third organism (often an insect or other animal). The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete dissemination or transmission of symbiont from host by vector (obsolete GO:0044008)","synonyms":[{"name":"dissemination or transmission of organism from host by vector","type":"exact"}],"termid":"GO:0044008"}


id: PBO:0075681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequestosome 1","termid":"PBO:0075681"}


id: PBO:0038976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADPGK antisense RNA 1","termid":"PBO:0038976"}


id: FYPO:0007810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, and morphology of cytoplasmic microtubules is normal (i.e. indistinguishable from wild type) during a cellular response to a pheromone.","definition_xrefs":["PMID:11950884","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytoplasmic microtubules","termid":"FYPO:0007809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cytoplasmic microtubules during cellular response to pheromone","synonyms":[{"name":"normal cytoplasmic microtubule morphology during cellular response to pheromone","type":"exact"},{"name":"normal cytoplasmic microtubule structure during cellular response to pheromone","type":"narrow"},{"name":"normal cytoplasmic microtubules during mating projection formation","type":"related"},{"name":"normal cytoplasmic microtubules during response to pheromone","type":"exact"},{"name":"normal microtubules during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0007810"}


id: GO:0051465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of corticotropin-releasing hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of corticotropin-releasing hormone secretion","termid":"GO:0043397"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"corticotropin-releasing hormone secretion","termid":"GO:0043396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of corticotropin-releasing hormone secretion","synonyms":[{"name":"down regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"down-regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"downregulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"inhibition of corticotropin-releasing hormone secretion","type":"narrow"},{"name":"negative regulation of CRF secretion","type":"exact"},{"name":"negative regulation of CRH secretion","type":"exact"},{"name":"negative regulation of corticotropin-releasing factor secretion","type":"exact"}],"termid":"GO:0051465"}


id: GO:0044567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, multimeric protein complex which catalyzes the biosynthesis of cellulose for the plant primary cell wall. In Arabidopsis, contains the essential component proteins CESA1 and -3, and a CESA6-related protein.","definition_xrefs":["GOC:tt","GOC:mengo_curators","PMID:21307367","PMID:17878302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose synthase complex","termid":"GO:0010330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"primary cell wall cellulose synthase complex","synonyms":[{"name":"primary cell wall CESA complex","type":"exact"},{"name":"primary cell-wall cellulose synthase complex","type":"exact"}],"termid":"GO:0044567"}


id: PBO:0080449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 10 like","termid":"PBO:0080449"}


id: PBO:0091160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-specific trancription factor Pc","termid":"PBO:0091160"}


id: PBO:0069141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 392, pseudogene","termid":"PBO:0069141"}


id: PR:P52808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3001 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P52808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L30-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.03c","synonyms":[{"name":"L32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3001","type":"exact"}],"termid":"PR:P52808"}


id: GO:0008614
data:
  {"annotated_genes":["SJAG_01881","SJAG_00283","SJAG_00691"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88850],"is_not":false,"summary":null,"term":"GO:0008614"},{"annotations":[91550,83760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_00691":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"pyridoxine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006773"],"synonyms":[{"name":"pyridoxine metabolism","type":"exact"}],"termid":"GO:0008614","terms_by_termid":{"GO:0008614":null,"GO:0008615":null}}


id: GO:0001173
data:
  {"annotated_genes":["SJAG_01523"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001174"}]},"cv_name":"biological_process","definition":"Any process involved in the selection of the specific location within the template strand of a DNA-dependent RNA polymerase promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["PMID:18846104","GOC:txnOH","PMID:16826228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01523":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"DNA-templated transcriptional start site selection","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001176"],"synonyms":[{"name":"DNA-dependent transcriptional start site selection","type":"exact"},{"name":"transcriptional start site selection at bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001173","terms_by_termid":{"GO:0001174":null}}


id: GO:0140671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and H2B. In budding yeast shares the histone acetylation (HAT) module of ADA2-GCN5-NGG1-SGF29 with the related SAGA complex.","definition_xrefs":["PMID:21734642","PMID:28966424","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"ADA complex","synonyms":[{"name":"ADA HAT complex","type":"exact"},{"name":"ADA histone acetyltransferase complex","type":"exact"},{"name":"Ada2/Gcn5/Ada3 transcription activator complex","type":"related"},{"name":"scADA","type":"narrow"}],"termid":"GO:0140671"}


id: GO:0071450
data:
  {"annotated_genes":["SJAG_04632","SJAG_05181","SJAG_04399","SJAG_04788","SJAG_03303","SJAG_03653","SJAG_01734","SJAG_04403","SJAG_00668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64533,67531,85015,95359,96246,106237,58046,89164,106281,85435],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen radical stimulus. An oxygen radical is any oxygen species that carries a free electron; examples include hydroxyl radicals and the superoxide anion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen radical","termid":"GO:0000305"},{"relation_name":"is_a","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxygen radical","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0071450","terms_by_termid":{"GO:0019430":null}}


id: GO:0052408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall cellulose (obsolete GO:0052408)","termid":"GO:0052408"}


id: PBO:0056327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 9","termid":"PBO:0056327"}


id: GO:0070927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of an ATP:ADP antiporter.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ATP:ADP antiporter activity (obsolete GO:0070927)","synonyms":[{"name":"down regulation of ATP:ADP antiporter activity","type":"exact"},{"name":"down-regulation of ATP:ADP antiporter activity","type":"exact"},{"name":"downregulation of ATP:ADP antiporter activity","type":"exact"},{"name":"inhibition of ATP:ADP antiporter activity","type":"narrow"}],"termid":"GO:0070927"}


id: PBO:0056253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated lung adenocarcinoma transcript 1","termid":"PBO:0056253"}


id: PR:Q9HDY5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1A10.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDY5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB1A10.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.05","synonyms":[{"name":"Spom972h-SPAPB1A10.05","type":"exact"}],"termid":"PR:Q9HDY5"}


id: GO:0046045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TMP, ribosylthymine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TMP metabolic process","termid":"GO:0046044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"TMP catabolic process","synonyms":[{"name":"TMP breakdown","type":"exact"},{"name":"TMP catabolism","type":"exact"},{"name":"TMP degradation","type":"exact"}],"termid":"GO:0046045"}


id: PBO:0090375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergothioneine biosynthesis methyltransferase Egt2","termid":"PBO:0090375"}


id: PBO:0057448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 568","termid":"PBO:0057448"}


id: PBO:0002906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly protein (predicted)","termid":"PBO:0002906"}


id: GO:1905310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:17628518","GO_REF:0000058","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:1905310"}


id: GO:0044239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of polysaccharides by salivary amylase. Salivary amylase is released by salivary glands, usually in the mouth.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete salivary polysaccharide catabolic process (obsolete GO:0044239)","synonyms":[{"name":"salivary polysaccharide breakdown","type":"exact"},{"name":"salivary polysaccharide catabolism","type":"exact"},{"name":"salivary polysaccharide degradation","type":"exact"}],"termid":"GO:0044239"}


id: GO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"regulates","term_name":"activation of membrane attack complex","termid":"GO:0001905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activation of membrane attack complex","synonyms":[{"name":"regulation of MAC assembly","type":"exact"},{"name":"regulation of MAC formation","type":"exact"},{"name":"regulation of activation of MAC","type":"exact"},{"name":"regulation of activation of TCC","type":"narrow"},{"name":"regulation of activation of terminal complement complex","type":"narrow"},{"name":"regulation of activation of the terminal complement cascade","type":"narrow"},{"name":"regulation of membrane attack complex assembly","type":"exact"},{"name":"regulation of membrane attack complex formation","type":"exact"}],"termid":"GO:0001969"}


id: GO:0102036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a tetrahydrofolate + a [methyl-Co(III) corrinoid Fe-S protein] = an N5-methyl-tetrahydrofolate + a [Co(I) corrinoid Fe-S protein].","definition_xrefs":["EC:2.1.1.258","PMID:7928975","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase activity","secondary_identifiers":["MetaCyc:METHCOCLTH-RXN","RHEA:45200"],"termid":"GO:0102036"}


id: GO:0043910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + factor gamma-F420-2 + H+ = coenzyme F390-A + diphosphate.","definition_xrefs":["MetaCyc:RXN-9385","PMID:8550473","GOC:jl","PMID:7957247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ATP:coenzyme F420 adenylyltransferase activity","synonyms":[{"name":"ATP:coenzyme F420 adenyltransferase activity","type":"exact"},{"name":"coenzyme F390-A synthetase activity","type":"exact"}],"termid":"GO:0043910"}


id: GO:0043335
data:
  {"annotated_genes":["SJAG_02619","SJAG_04187","SJAG_02997","SJAG_02825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86256,100333,106983,113493],"is_not":false,"summary":null,"term":"GO:0043335"}]},"cv_name":"biological_process","definition":"The process of assisting in the disassembly of non-covalent linkages in a protein or protein aggregate, often where the proteins are in a non-functional or denatured state.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02619":null,"SJAG_02825":null,"SJAG_02997":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein unfolding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043335","terms_by_termid":{"GO:0043335":null}}


id: GO:0055018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle fiber development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell differentiation","termid":"GO:2000725"},{"relation_name":"regulates","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle fiber development","synonyms":[{"name":"regulation of cardiac muscle fibre development","type":"exact"},{"name":"regulation of heart muscle fiber development","type":"exact"}],"termid":"GO:0055018"}


id: GO:1900328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mannotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of mannotriose transport","termid":"GO:1900327"},{"relation_name":"negatively_regulates","term_name":"mannotriose transport","termid":"GO:2001095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of mannotriose transport","synonyms":[{"name":"down regulation of mannotriose transport","type":"exact"},{"name":"down-regulation of mannotriose transport","type":"exact"},{"name":"downregulation of mannotriose transport","type":"exact"},{"name":"inhibition of mannotriose transport","type":"narrow"}],"termid":"GO:1900328"}


id: PBO:0004979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"28S ribosomal RNA","termid":"PBO:0004979"}


id: GO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the synthesis of free D-serine from L-serine.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"serine racemase activity","secondary_identifiers":["MetaCyc:5.1.1.18-RXN","EC:5.1.1.18","Reactome:R-HSA-9014766","RHEA:10980"],"termid":"GO:0030378"}


id: GO:0043280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043281"},{"relation_name":"is_a","term_name":"positive regulation of cysteine-type endopeptidase activity","termid":"GO:2001056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic process","synonyms":[{"name":"activation of caspase activity","type":"narrow"},{"name":"positive regulation of caspase activity","type":"broad"},{"name":"stimulation of caspase activity","type":"narrow"},{"name":"up regulation of caspase activity","type":"exact"},{"name":"up-regulation of caspase activity","type":"exact"},{"name":"upregulation of caspase activity","type":"exact"}],"termid":"GO:0043280"}


id: FYPO:0000624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which any process of negative regulation of transcription is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal negative regulation of transcription during vegetative growth","synonyms":[{"name":"abnormal down regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal down regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal down-regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal down-regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal downregulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal downregulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal inhibition of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal inhibition of transcription, DNA-dependent, during vegetative growth","type":"narrow"},{"name":"abnormal negative regulation of cellular transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal negative regulation of transcription during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"}],"termid":"FYPO:0000624"}


id: PBO:0068503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 91, pseudogene","termid":"PBO:0068503"}


id: PBO:0086336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protoporphyrinogen oxidase; a mitochondrial enzyme that catalyzes the seventh step in the heme biosynthetic pathway, converting protoporphyrinogen IX to protoporphyrin IX; inhibited by diphenyl ether-type herbicides","termid":"PBO:0086336"}


id: GO:0045782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell budding","termid":"GO:0007116"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"positive regulation of asexual reproduction","termid":"GO:1903666"},{"relation_name":"positively_regulates","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell budding","synonyms":[{"name":"activation of cell budding","type":"narrow"},{"name":"positive regulation of budding","type":"broad"},{"name":"stimulation of cell budding","type":"narrow"},{"name":"up regulation of cell budding","type":"exact"},{"name":"up-regulation of cell budding","type":"exact"},{"name":"upregulation of cell budding","type":"exact"}],"termid":"GO:0045782"}


id: PBO:0108978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 3","termid":"PBO:0108978"}


id: PBO:0045843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 33","termid":"PBO:0045843"}


id: PBO:0042532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5 regulatory subunit 2","termid":"PBO:0042532"}


id: PBO:0077490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 210","termid":"PBO:0077490"}


id: PBO:0045834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 24","termid":"PBO:0045834"}


id: GO:0000145
data:
  {"annotated_genes":["SJAG_03864","SJAG_03938","SJAG_03357","SJAG_02166","SJAG_04960","SJAG_02753","SJAG_02320","SJAG_01925","SJAG_04044"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84655,86776,95634,98010,110032,110321,111814,113915,115014],"is_not":false,"summary":null,"term":"GO:0000145"}]},"cv_name":"cellular_component","definition":"A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals.","definition_xrefs":["GOC:cilia","PMID:15292201","PMID:27243008","PMID:9700152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02753":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"exocyst","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Exocyst"],"synonyms":[{"name":"Sec6/8 complex","type":"exact"},{"name":"exocyst complex","type":"exact"}],"termid":"GO:0000145","terms_by_termid":{"GO:0000145":null}}


id: GO:0018990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shedding of the old chitin-based cuticlar fragments during the molting cycle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecdysis, chitin-based cuticle","termid":"GO:0018990"}


id: SO:0000856
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is similar or identical across more than one species.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved","termid":"SO:0000856"}


id: PBO:0080606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 43","termid":"PBO:0080606"}


id: PBO:0017681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transmembrane transporter Amt3","termid":"PBO:0017681"}


id: GO:0033919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal (1->3)-alpha-D-glucosidic links in 1,3-alpha-D-glucans.","definition_xrefs":["EC:3.2.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"glucan 1,3-alpha-glucosidase activity","secondary_identifiers":["Reactome:R-HSA-9683663","MetaCyc:3.2.1.84-RXN","Reactome:R-HSA-532667","Reactome:R-HSA-548890","Reactome:R-HSA-9694364"],"synonyms":[{"name":"1,3-alpha-D-glucan 3-glucohydrolase activity","type":"related"},{"name":"exo-1,3-alpha-glucanase activity","type":"related"}],"termid":"GO:0033919"}


id: GO:0160211
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the lipid bilayers that surround an apicoplast and form the apicoplast envelope.","definition_xrefs":["PMID:20124342","PMID:38865262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"apicoplast","termid":"GO:0020011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"apicoplast membrane","termid":"GO:0160211"}


id: PBO:0082175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor; GTPase of the Ras superfamily involved in regulation of coated vesicle formation in intracellular trafficking within the Golgi; involved in mitochondrial morphology; ARF1 has a paralog, ARF2, that arose from the whole genome duplication; arf1 arf2 double null mutation is complemented by human ARF1, ARF4, ARF5, or ARF6","termid":"PBO:0082175"}


id: FYPO:0004499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the rate or occurrence of DNA polymerase processivity factor activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal DNA polymerase processivity factor activity","termid":"FYPO:0004499"}


id: GO:0016483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of the enzyme tryptophase hydroxylase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"tryptophan hydroxylase activator activity","termid":"GO:0016483"}


id: FYPO:0005520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nucleosome-dependent ATPase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal nucleosome-dependent ATPase activity","termid":"FYPO:0005519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abolished nucleosome-dependent ATPase activity","synonyms":[{"name":"nucleosome-dependent ATPase activity abolished","type":"exact"}],"termid":"FYPO:0005520"}


id: PBO:0005316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp1","termid":"PBO:0005316"}


id: GO:0035870
data:
  {"annotated_genes":["SJAG_04487","SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95075,114785],"is_not":false,"summary":null,"term":"GO:0035870"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dITP + H2O = dIMP + H+ + diphosphate.","definition_xrefs":["PMID:21548881","RHEA:28342","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03797":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0047429","GO:0003674"],"is_obsolete":false,"name":"dITP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-1602","KEGG_REACTION:R03531","EC:3.6.1.66","Reactome:R-HSA-2509838"],"synonyms":[{"name":"2'-deoxyinosine-5'-triphosphate pyrophosphohydrolase activity","type":"exact"},{"name":"dITP pyrophosphatase activity","type":"exact"},{"name":"deoxyinosine triphosphate pyrophosphatase activity","type":"exact"}],"termid":"GO:0035870","terms_by_termid":{"GO:0035870":null}}


id: PBO:0053816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1077","termid":"PBO:0053816"}


id: PBO:0027406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sulfite_reductase_activity","termid":"PBO:0027406"}


id: PBO:0090957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein associated factor Taf2","termid":"PBO:0090957"}


id: GO:0120012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of sphingolipids between membranes in which a sphingolipid molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane. This process does not require metabolic energy and can be either spontaneous or mediated by lipid transfer proteins (LTPs).","definition_xrefs":["GOC:krc","PMID:24220498","PMID:20823909","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"intermembrane lipid transfer","termid":"GO:0120009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"intermembrane sphingolipid transfer","termid":"GO:0120012"}


id: PBO:0063621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofructokinase, muscle","termid":"PBO:0063621"}


id: PBO:0086075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with 8 putative transmembrane segments; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression","termid":"PBO:0086075"}


id: GO:0008736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-fucose = L-fuculose.","definition_xrefs":["EC:5.3.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"L-fucose isomerase activity","secondary_identifiers":["MetaCyc:FUCISOM-RXN","RHEA:17233"],"synonyms":[{"name":"L-fucose aldose-ketose-isomerase activity","type":"related"},{"name":"L-fucose ketol-isomerase activity","type":"related"}],"termid":"GO:0008736"}


id: PBO:0078629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 80, pseudogene","termid":"PBO:0078629"}


id: PBO:0035709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasmic_microtubule","termid":"PBO:0035709"}


id: PBO:0077592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 3","termid":"PBO:0077592"}


id: GO:0021699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar cortex to attain its fully functional state. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","ISBN:0838580343","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellum maturation","termid":"GO:0021590"},{"relation_name":"part_of","term_name":"cerebellar cortex development","termid":"GO:0021695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar cortex maturation","termid":"GO:0021699"}


id: PBO:0062659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 9","termid":"PBO:0062659"}


id: GO:0060480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lung goblet cell. A goblet cell is a cell of the epithelial lining that produces and secretes mucins.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"},{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"},{"relation_name":"part_of","term_name":"lobar bronchus epithelium development","termid":"GO:0060481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung goblet cell differentiation","synonyms":[{"name":"pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:0060480"}


id: PBO:0073992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 2","termid":"PBO:0073992"}


id: FYPO:0006712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetyl-CoA measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular acetyl-CoA level","synonyms":[{"name":"decreased cellular acetyl-CoA level during mitotic cell cycle","type":"related"},{"name":"decreased cellular acetyl-CoA level during vegetative growth","type":"exact"},{"name":"reduced cellular acetyl-CoA level","type":"exact"}],"termid":"FYPO:0006712"}


id: FYPO:0006485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4-bisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4)P2 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4-bisphosphate level","type":"exact"}],"termid":"FYPO:0006485"}


id: PBO:0071908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 47","termid":"PBO:0071908"}


id: GO:0031866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP3 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"EP3 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP3 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP3 receptor binding","type":"exact"}],"termid":"GO:0031866"}


id: GO:0060487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell that contributes to the epithelium of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"lung cell differentiation","termid":"GO:0060479"},{"relation_name":"part_of","term_name":"lung epithelium development","termid":"GO:0060428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung epithelial cell differentiation","synonyms":[{"name":"pulmonary epithelial cell differentiation","type":"related"}],"termid":"GO:0060487"}


id: GO:0051765
data:
  {"annotated_genes":["SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000825"},{"annotations":[94879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047326"},{"annotations":[94880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000824"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol tetrakisphosphate + ATP = inositol pentakisphosphate + ADP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"inositol tetrakisphosphate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051765","terms_by_termid":{"GO:0000824":null,"GO:0000825":null,"GO:0047326":null}}


id: PBO:0075911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 3","termid":"PBO:0075911"}


id: GO:1904112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of plus-end directed microfilament motor activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:kmv","PMID:25717181"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of plus-end directed microfilament motor activity (obsolete GO:1904112)","synonyms":[{"name":"activation of barbed-end directed actin-filament motor activity","type":"narrow"},{"name":"activation of plus-end directed actin filament motor activity","type":"related"},{"name":"activation of plus-end directed actin-filament motor activity","type":"narrow"},{"name":"activation of plus-end directed microfilament motor activity","type":"narrow"},{"name":"positive regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"positive regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"positive regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"up regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"up-regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"up-regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"up-regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up-regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"upregulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"upregulation of plus-end directed actin filament motor activity","type":"related"},{"name":"upregulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"upregulation of plus-end directed microfilament motor activity","type":"exact"}],"termid":"GO:1904112"}


id: GO:0046405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol = 3-hydroxypropanal + H2O.","definition_xrefs":["EC:4.2.1.30","PMID:18307109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"glycerol dehydratase activity","secondary_identifiers":["MetaCyc:GLYCEROL-DEHYDRATASE-RXN","RHEA:19765"],"synonyms":[{"name":"glycerol dehydrase activity","type":"related"},{"name":"glycerol hydro-lyase (3-hydroxypropanal-forming)","type":"related"},{"name":"glycerol hydro-lyase activity","type":"related"}],"termid":"GO:0046405"}


id: PBO:0058960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 3","termid":"PBO:0058960"}


id: FYPO:0005983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of potassium ions out of a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal potassium export","termid":"FYPO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased potassium export","synonyms":[{"name":"decreased cellular potassium export","type":"exact"},{"name":"decreased potassium export during mitotic cell cycle","type":"related"},{"name":"decreased potassium export during vegetative growth","type":"exact"},{"name":"decreased potassium export from cell","type":"exact"},{"name":"decreased potassium ion export","type":"exact"},{"name":"decreased potassium ion export across plasma membrane","type":"exact"},{"name":"reduced potassium export","type":"exact"}],"termid":"FYPO:0005983"}


id: PBO:0027752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus","termid":"PBO:0027752"}


id: PBO:0075037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-48","termid":"PBO:0075037"}


id: FYPO:0006671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells fuse for a much shorter time than normal during mating, separate with incomplete exchange of cytosol contents, and the conjugation pore then reseals.","definition_xrefs":["PMID:30089908","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal sporulation resulting in formation of ascus with more than four spores","termid":"FYPO:0003263"},{"relation_name":"is_a","term_name":"abnormal cell fusion during mating","termid":"FYPO:0000412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"transient cell fusion during mating","synonyms":[{"name":"transient cell fusion during conjugation","type":"exact"},{"name":"transient cytogamy during conjugation","type":"exact"},{"name":"transient cytogamy during mating","type":"exact"}],"termid":"FYPO:0006671"}


id: PBO:0053841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1107","termid":"PBO:0053841"}


id: GO:0045268
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The hexamer that possesses the catalytic activity of the plasma membrane hydrogen-transporting ATP synthase. Examples of this component are found in Bacterial species.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase, catalytic core (obsolete GO:0045268)","synonyms":[{"name":"hydrogen-transporting ATP synthase, catalytic core","type":"broad"},{"name":"proton-transporting ATP synthase, catalytic core","type":"broad"}],"termid":"GO:0045268"}


id: PBO:0080080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 42","termid":"PBO:0080080"}


id: PBO:0029801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-misoriented_actin_cables","termid":"PBO:0029801"}


id: PBO:0071257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 2","termid":"PBO:0071257"}


id: GO:0062245
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double membrane vesicle viral factory membrane","termid":"GO:0062242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory inner membrane","synonyms":[{"name":"inner membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062245"}


id: PBO:0087584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); necessary for maintaining sister chromatid cohesion in prophase I of meiosis by inhibiting premature ubiquitination and subsequent degradation of substrates by the APC(Ama1) ubiquitin ligase","termid":"PBO:0087584"}


id: PBO:0055472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2905","termid":"PBO:0055472"}


id: PBO:0005904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamic acid, mitochondrial","termid":"PBO:0005904"}


id: PBO:0059174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 2 receptor accessory protein","termid":"PBO:0059174"}


id: PBO:0083474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SEL1","termid":"PBO:0083474"}


id: GO:0017172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + O2 = 3-sulfino-L-alanine + H+.","definition_xrefs":["RHEA:20441","EC:1.13.11.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cysteine dioxygenase activity","secondary_identifiers":["MetaCyc:CYSTEINE-DIOXYGENASE-RXN","Reactome:R-HSA-1614645","KEGG_REACTION:R00893"],"termid":"GO:0017172"}


id: GO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a long-chain fatty acid from one side of a membrane to the other. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transmembrane transporter activity","termid":"GO:0015245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"long-chain fatty acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-2046087","Reactome:R-HSA-2046093","Reactome:R-HSA-382575","GO:0008562","Reactome:R-HSA-390393","GO:0005325","RHEA:39283","Reactome:R-HSA-5684043","Reactome:R-HSA-434381"],"synonyms":[{"name":"long-chain fatty acid transporter activity","type":"related"}],"termid":"GO:0005324"}


id: PBO:0067029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 42, pseudogene","termid":"PBO:0067029"}


id: PR:Q9C104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gde1 gene.","definition_xrefs":["UniProtKB:Q9C104","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase gde1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.05","synonyms":[{"name":"Spom972h-gde1","type":"exact"}],"termid":"PR:Q9C104"}


id: PBO:0085233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pbp1p binding protein; interacts strongly with Pab1p-binding protein 1 (Pbp1p) in the yeast two-hybrid system; also interacts with Lsm12p in a copurification assay; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085233"}


id: PBO:0053638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 685","termid":"PBO:0053638"}


id: PBO:0028291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_arsenic","termid":"PBO:0028291"}


id: PBO:0081636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 564","termid":"PBO:0081636"}


id: PBO:0061937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily M member 4 pseudogene","termid":"PBO:0061937"}


id: PBO:0073159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61G divergent transcript","termid":"PBO:0073159"}


id: GO:0000315
data:
  {"annotated_genes":["SJAG_04490","SJAG_05270","SJAG_03040","SJAG_05244","SJAG_03284","SJAG_02762","SJAG_03192","SJAG_05573","SJAG_04493","SJAG_05218","SJAG_01045","SJAG_05221","SJAG_03649","SJAG_00497","SJAG_00844","SJAG_04689","SJAG_01719","SJAG_01829","SJAG_00086","SJAG_03176","SJAG_01630","SJAG_01727","SJAG_03297","SJAG_04893","SJAG_04216","SJAG_04019","SJAG_07009","SJAG_01478","SJAG_01463","SJAG_02836","SJAG_03402","SJAG_01303","SJAG_02071","SJAG_01591","SJAG_06110","SJAG_04244","SJAG_03459","SJAG_03636","SJAG_06253","SJAG_00315","SJAG_01473","SJAG_04889","SJAG_00799","SJAG_01413","SJAG_04207"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92966,109055,113299,92284,92323,99806,108618,111588,94037,94733,101827,87488,104365,105982,108879,99443,107249,110876,100485,97184,85056,100980,94058,92662,104218,110756,110478,111408,108380,95182,109613,112333,112445,101974,113185,114107,84387,99552,102877,98025,111541,106922,98720,104318,85506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005762"}]},"cv_name":"cellular_component","definition":"The larger of the two subunits of an organellar ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large ribosomal subunit","termid":"GO:0015934"},{"relation_name":"part_of","term_name":"organellar ribosome","termid":"GO:0000313"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00086":null,"SJAG_00315":null,"SJAG_00497":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_01045":null,"SJAG_01303":null,"SJAG_01413":null,"SJAG_01463":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01591":null,"SJAG_01630":null,"SJAG_01719":null,"SJAG_01727":null,"SJAG_01829":null,"SJAG_02071":null,"SJAG_02762":null,"SJAG_02836":null,"SJAG_03040":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03402":null,"SJAG_03459":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_04019":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04689":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_05218":null,"SJAG_05221":null,"SJAG_05244":null,"SJAG_05270":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_07009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"organellar large ribosomal subunit","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000315","terms_by_termid":{"GO:0005762":null}}


id: GO:0004432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class I PI3K activated by tyrosine phosphorylation events.","definition_xrefs":["PMID:11050418"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-4-phosphate kinase, class IA (obsolete GO:0004432)","synonyms":[{"name":"1-phosphatidylinositol-4-phosphate kinase, class IA","type":"exact"}],"termid":"GO:0004432"}


id: GO:0005362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose(out) + Na+(out) = D-glucose(in) + Na+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose:sodium symporter activity","termid":"GO:0005412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"low-affinity D-glucose:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-429567"],"synonyms":[{"name":"low-affinity glucose-sodium cotransporter activity","type":"broad"},{"name":"low-affinity glucose:sodium symporter activity","type":"exact"}],"termid":"GO:0005362"}


id: PBO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB proto-oncogene, transcription factor","termid":"PBO:0060233"}


id: PBO:0029537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_and_tapered_cells_(obsolete_FYPO:0002185)","termid":"PBO:0029537"}


id: PBO:0062719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily Q member 1","termid":"PBO:0062719"}


id: PBO:0035717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcriptional_repression_at_centromere_central_core","termid":"PBO:0035717"}


id: PBO:0058204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4497","termid":"PBO:0058204"}


id: PBO:0042625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 1B","termid":"PBO:0042625"}


id: PBO:0030671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_heterochromatin_during_vegetative_growth","termid":"PBO:0030671"}


id: GO:0031855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oxytocin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"oxytocin receptor binding","synonyms":[{"name":"oxytocin receptor ligand","type":"narrow"}],"termid":"GO:0031855"}


id: PBO:0030181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population","termid":"PBO:0030181"}


id: PBO:0017821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain protein Man1, Sad1 interacting factor","termid":"PBO:0017821"}


id: GO:0061185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of embryonic development","termid":"GO:0045992"},{"relation_name":"is_a","term_name":"regulation of dermatome development","termid":"GO:0061183"},{"relation_name":"negatively_regulates","term_name":"dermatome development","termid":"GO:0061054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dermatome development","termid":"GO:0061185"}


id: GO:0008283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:mah","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell population proliferation","synonyms":[{"name":"cell proliferation","type":"related"}],"termid":"GO:0008283"}


id: PR:000050524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DASH complex subunit dam1 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-143 of the amino acid sequence represented by UniProtKB:Q9HDZ6. Example: UniProtKB:Q9HDZ6, Ser-143, MOD:00046.","definition_xrefs":["PomBase:VW","PMID:22375062","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DASH complex subunit dam1 (Schizosaccharomyces pombe)","termid":"PR:000050523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dam1/Phos(S143)","pombase_gene_id":"SPAC589.08c","synonyms":[{"name":"PomBase_original_PRO_term_name: DASH complex subunit dam1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-dam1/Phos:1","type":"exact"},{"name":"UniProtKB:Q9HDZ6, Ser-143, MOD:00046","type":"narrow"},{"name":"dam1/Phos(S143)","type":"exact"}],"termid":"PR:000050524"}


id: PR:O74759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nto1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mst2 complex subunit nto1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.04c","synonyms":[{"name":"Spom972h-nto1","type":"exact"}],"termid":"PR:O74759"}


id: PBO:0003272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1-5,6,7,8-tetrahydrofolate (THF) synthase","termid":"PBO:0003272"}


id: PBO:0063744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 9","termid":"PBO:0063744"}


id: PBO:0031651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031651"}


id: GO:0003119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of epinephrine released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by epinephrine","termid":"GO:0003115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by neuronal epinephrine","synonyms":[{"name":"regulation of vasoconstriction by neuronal adrenaline","type":"exact"}],"termid":"GO:0003119"}


id: GO:0033226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 2-aminoethylphosphonate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"2-aminoethylphosphonate binding","synonyms":[{"name":"2-phosphonoethylamine binding","type":"exact"},{"name":"ciliatine binding","type":"exact"}],"termid":"GO:0033226"}


id: GO:0032109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a response to nutrient levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to nutrient levels","synonyms":[{"name":"activation of response to nutrient levels","type":"narrow"},{"name":"stimulation of response to nutrient levels","type":"narrow"},{"name":"up regulation of response to nutrient levels","type":"exact"},{"name":"up-regulation of response to nutrient levels","type":"exact"},{"name":"upregulation of response to nutrient levels","type":"exact"}],"termid":"GO:0032109"}


id: PBO:0000660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Spb1 (predicted)","termid":"PBO:0000660"}


id: PR:Q9P4X1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi4 gene.","definition_xrefs":["UniProtKB:Q9P4X1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C959.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.05c","synonyms":[{"name":"Spom972h-pdi4","type":"exact"},{"name":"protein disulfide isomerase C959.05c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P4X1"}


id: MOD:01657
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 4-(4-dimethylaminophenylazo)benzenesulfonyl chloride, dabsyl chloride, to form N6-Dabsyl-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"Dabsyl chloride derivatized residue","termid":"MOD:01656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-Dabsyl derivatized lysine","synonyms":[{"name":"N6-[4-([4-(dimethylamino)phenyl]diazenyl)benzenesulfonyl]lysine","type":"exact"},{"name":"N6DabsylLys","type":"exact"}],"termid":"MOD:01657"}


id: PBO:0039668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit sigma 1","termid":"PBO:0039668"}


id: PBO:0078378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells like 2","termid":"PBO:0078378"}


id: PBO:0003968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein","termid":"PBO:0003968"}


id: GO:0010709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a stable duplex DNA that contains one strand from each of the two recombining DNA molecules resulting in the error-free repair of a double-strand break without the exchange of adjacent sequences.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heteroduplex formation","termid":"GO:0030491"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006310","GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"heteroduplex formation involved in double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0010709"}


id: GO:2001276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-leucine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of cellular amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"L-leucine biosynthetic process","termid":"GO:0009098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"regulation of L-leucine biosynthetic process","synonyms":[{"name":"regulation of L-leucine anabolism","type":"exact"},{"name":"regulation of L-leucine biosynthesis","type":"exact"},{"name":"regulation of L-leucine formation","type":"exact"},{"name":"regulation of L-leucine synthesis","type":"exact"},{"name":"regulation of leucine biosynthetic process","type":"broad"}],"termid":"GO:2001276"}


id: PBO:0090650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX2 complex subunit-like (poorly characterized, implicated in transcription or splicing)","termid":"PBO:0090650"}


id: GO:2000178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neural precursor cell proliferation.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"negatively_regulates","term_name":"neural precursor cell proliferation","termid":"GO:0061351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"}


id: PBO:0110370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOSC8 pseudogene 1","termid":"PBO:0110370"}


id: GO:0097395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-32 stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-32","synonyms":[{"name":"response to IL-32","type":"exact"}],"termid":"GO:0097395"}


id: GO:1901407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:1901407)","synonyms":[{"name":"regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:1901407"}


id: PBO:0066138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB transcriptional corepressor 1","termid":"PBO:0066138"}


id: GO:0085029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of the extracellular matrix.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"extracellular matrix assembly","termid":"GO:0085029"}


id: PBO:0080810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6","termid":"PBO:0080810"}


id: PBO:0086055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cell periphery, SWAT-GFP fusion also localizes to the extracellular region, and mCherry fusion also localizes to the vacuole; S/T rich and highly similar to YOL155C, a putative glucan alpha-1,4-glucosidase; transcript is induced in both high and low pH environments; non-essential gene","termid":"PBO:0086055"}


id: GO:0046672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of programmed cell death that occurs in the compound eye retina.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye retinal cell programmed cell death","termid":"GO:0046669"},{"relation_name":"is_a","term_name":"positive regulation of retinal cell programmed cell death","termid":"GO:0046670"},{"relation_name":"positively_regulates","term_name":"compound eye retinal cell programmed cell death","termid":"GO:0046667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye retinal cell programmed cell death","synonyms":[{"name":"activation of retinal cell programmed cell death","type":"broad"},{"name":"positive regulation of retinal cell programmed cell death","type":"broad"},{"name":"stimulation of retinal cell programmed cell death","type":"broad"},{"name":"up regulation of retinal cell programmed cell death","type":"broad"},{"name":"up-regulation of retinal cell programmed cell death","type":"broad"},{"name":"upregulation of retinal cell programmed cell death","type":"broad"}],"termid":"GO:0046672"}


id: GO:2000684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to X-ray.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to X-ray","termid":"GO:2000683"},{"relation_name":"negatively_regulates","term_name":"cellular response to X-ray","termid":"GO:0071481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to X-ray","synonyms":[{"name":"negative regulation of cellular response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:2000684"}


id: SO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The lambda bacteriophage is the vector for the linear lambda clone. The genes involved in the lysogenic pathway are removed from the from the viral DNA. Up to 25 kb of foreign DNA can then be inserted into the lambda genome.","definition_xrefs":["ISBN:0-1767-2380-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lambda_vector","synonyms":[{"name":"lambda vector","type":"exact"}],"termid":"SO:0000754"}


id: PBO:0024870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar aminopeptidase","termid":"PBO:0024870"}


id: GO:0071318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ATP","termid":"GO:0033198"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ATP","synonyms":[{"name":"cellular response to adenosine 5'-triphosphate","type":"exact"},{"name":"cellular response to adenosine triphosphate","type":"exact"}],"termid":"GO:0071318"}


id: PBO:0039339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, pseudogene","termid":"PBO:0039339"}


id: PBO:0082247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0082247"}


id: GO:0015608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carbohydrate(out) -> ADP + phosphate + carbohydrate(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"carbohydrate-importing ABC transporter activity","secondary_identifiers":["TC:3.A.1.1.1"],"synonyms":[{"name":"carbohydrate uptake transporter activity","type":"exact"},{"name":"carbohydrate-importing ATPase activity","type":"broad"},{"name":"sugar transporter","type":"narrow"}],"termid":"GO:0015608"}


id: GO:0045689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of antipodal cell differentiation","termid":"GO:0045688"},{"relation_name":"negatively_regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antipodal cell differentiation","synonyms":[{"name":"down regulation of antipodal cell differentiation","type":"exact"},{"name":"down-regulation of antipodal cell differentiation","type":"exact"},{"name":"downregulation of antipodal cell differentiation","type":"exact"},{"name":"inhibition of antipodal cell differentiation","type":"narrow"}],"termid":"GO:0045689"}


id: GO:0090528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a smooth septate junction, a septate junction that lacks the regular arrays of electron-dense septae found in pleated septate junctions.","definition_xrefs":["PMID:22854041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septate junction assembly","termid":"GO:0019991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"smooth septate junction assembly","termid":"GO:0090528"}


id: PBO:0056033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphotoxin beta","termid":"PBO:0056033"}


id: GO:0009672
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: auxin(out) + H+(out) = auxin(in) + H+(in).","definition_xrefs":["PMID:8688077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"auxin transmembrane transporter activity","termid":"GO:0080161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"auxin:proton symporter activity","synonyms":[{"name":"auxin:hydrogen symporter activity","type":"exact"}],"termid":"GO:0009672"}


id: PBO:0046899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 21 member F, pseudogene","termid":"PBO:0046899"}


id: GO:0045164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Secretin is a hormone that takes part in the digestion process. It also has effects on organs other than gastrointestinal tract.","definition_xrefs":["PMID:11320551"],"gene_count":0,"genotype_count":0,"name":"obsolete secretin (sensu Mammalia) (obsolete GO:0045164)","synonyms":[{"name":"secretin (sensu Mammalia)","type":"exact"}],"termid":"GO:0045164"}


id: GO:1990140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex that catalyses sulfur transfer from the sulfur carrier subunit of molybdopterin synthase to precursor Z to synthesize molybdopterin as part of molybdopterin cofactor (Moco) biosynthesis. In E. coli the subunits are MoaE and MoaD; in human, MOCS2B and MOCS2A. Moco biosynthesis and its constituent molecules are evolutionarily conserved.","definition_xrefs":["PMID:11135669","GOC:bhm","PMID:16669776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase complex","termid":"GO:1990228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"molybdopterin synthase complex","synonyms":[{"name":"MPT synthase complex","type":"exact"},{"name":"molybdopterin cofactor (Moco) biosynthesis sulfurtransferase complex","type":"related"},{"name":"molybdopterin converting factor complex","type":"exact"}],"termid":"GO:1990140"}


id: PBO:0114091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase membrane subunit, Atp6","termid":"PBO:0114091"}


id: PBO:0059327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S2","termid":"PBO:0059327"}


id: PBO:0036517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex variant subunit Cbc3","termid":"PBO:0036517"}


id: PBO:0043352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLPTM1L pseudogene 1","termid":"PBO:0043352"}


id: GO:0004448
data:
  {"annotated_genes":["SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004450"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NAD(P)+ = 2-oxoglutarate + CO2 + NAD(P)H.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IDH activity","type":"related"},{"name":"IDP activity","type":"related"},{"name":"isocitrate dehydrogenase activity","type":"exact"},{"name":"isocitric acid dehydrogenase activity","type":"exact"},{"name":"isocitric dehydrogenase activity","type":"exact"},{"name":"oxalosuccinate carboxylase activity","type":"exact"},{"name":"oxalosuccinate decarboxylase activity","type":"exact"},{"name":"oxalosuccinic decarboxylase activity","type":"exact"}],"termid":"GO:0004448","terms_by_termid":{"GO:0004450":null}}


id: PBO:0045539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase maturation factor 1","termid":"PBO:0045539"}


id: GO:0016614
data:
  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id: FYPO:0000363
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id: FYPO:0004605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the total distance travelled by the SPB during horsetail movement is decreased. Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I. PMID:24954111","definition_xrefs":["GO:0030989","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal horsetail movement","termid":"FYPO:0000197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased distance travelled by the spindle pole body during horsetail movement","synonyms":[{"name":"decreased dynein-driven meiotic oscillatory nuclear movement","type":"related"},{"name":"decreased horsetail nuclear movement","type":"related"},{"name":"reduced horsetail movement","type":"related"}],"termid":"FYPO:0004605"}


id: GO:0051873
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id: FYPO:0004658
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and has two nuclei and more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"binucleate multiseptate vegetative cell","termid":"FYPO:0001223"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000004","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"inviable binucleate multiseptate vegetative cell","synonyms":[{"name":"inviable binucleate multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable binucleate multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; binucleate multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0004658"}


id: FYPO:0007158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3 binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:31584934","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone binding","termid":"FYPO:0007157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3 binding","synonyms":[{"name":"decreased protein-histone H3 interaction","type":"exact"},{"name":"reduced histone H3 binding","type":"exact"}],"termid":"FYPO:0007158"}


id: PBO:0075962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 4","termid":"PBO:0075962"}


id: FYPO:0003624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues of one or more specific proteins is decreased during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation during cellular response to heat (obsolete FYPO:0003624)","synonyms":[{"name":"decreased protein threonine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"reduced protein threonine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003624"}


id: PBO:0013774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mst2 histone acetytransferase acytyltransferase complex, predicted phosphoric monoester hydrolase Ptf1","termid":"PBO:0013774"}


id: PBO:0018077
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DCP1B","termid":"PBO:0018077"}


id: FYPO:0006063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septin ring assembly begins in mitotic interphase instead of during nuclear division.","definition_xrefs":["PMID:15385632","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septin ring assembly during vegetative growth","termid":"FYPO:0006061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"septin ring assembly during mitotic interphase","synonyms":[{"name":"septin ring assembly during interphase of mitotic cell cycle","type":"exact"},{"name":"septin ring assembly during mitotic interphase during vegetative growth","type":"exact"},{"name":"septin ring formation during mitotic interphase","type":"exact"}],"termid":"FYPO:0006063"}


id: GO:0099182
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The intermediate filament cytoskeleton that is part of a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton","termid":"GO:0045111"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton","termid":"GO:0099569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic intermediate filament cytoskeleton","termid":"GO:0099182"}


id: PR:Q9UT38
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00690","PANTHER:PTHR12811:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 16 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.05","secondary_identifiers":["UniProtKB:Q9UT38"],"synonyms":[{"name":"Spom972h-VPS16","type":"exact"}],"termid":"PR:Q9UT38"}


id: GO:1901408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:1901408)","synonyms":[{"name":"down regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"down regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"down regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"down regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"down regulation of phosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"down-regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"down-regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"down-regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"down-regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"down-regulation of phosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"downregulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"downregulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"downregulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"downregulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"downregulation of phosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"inhibition of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"inhibition of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"inhibition of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"inhibition of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"inhibition of phosphorylation of RNA polymerase II C-terminal domain","type":"narrow"},{"name":"negative regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"negative regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"negative regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"negative regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:1901408"}


id: PBO:0046736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 3'-5' domain containing 2","termid":"PBO:0046736"}


id: GO:0009708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of benzyl isoquinoline alkaloids, compounds with bicyclic N-containing aromatic rings.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid biosynthetic process","termid":"GO:0033075"},{"relation_name":"is_a","term_name":"benzyl isoquinoline alkaloid metabolic process","termid":"GO:0046445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"benzyl isoquinoline alkaloid biosynthetic process","synonyms":[{"name":"benzyl isoquinoline alkaloid anabolism","type":"exact"},{"name":"benzyl isoquinoline alkaloid biosynthesis","type":"exact"},{"name":"benzyl isoquinoline alkaloid formation","type":"exact"},{"name":"benzyl isoquinoline alkaloid synthesis","type":"exact"}],"termid":"GO:0009708"}


id: PBO:0058645
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6774","termid":"PBO:0058645"}


id: PBO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"with","termid":"PBO:0000098"}


id: PBO:0055518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2952","termid":"PBO:0055518"}


id: GO:1904908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion, telomeric.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:26373281","GOC:rph","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034183"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:1904907"},{"relation_name":"negatively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:0099403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"down regulation of maintenance of mitotic sister chromatid cohesion, telomeric","type":"exact"},{"name":"down regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"down regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"down regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"},{"name":"down-regulation of maintenance of mitotic sister chromatid cohesion, telomeric","type":"exact"},{"name":"down-regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"down-regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"down-regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"},{"name":"downregulation of maintenance of mitotic sister chromatid cohesion, telomeric","type":"exact"},{"name":"downregulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"downregulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"downregulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"},{"name":"inhibition of maintenance of mitotic sister chromatid cohesion, telomeric","type":"narrow"},{"name":"inhibition of maintenance of mitotic sister chromatin cohesion at telomere","type":"narrow"},{"name":"inhibition of maintenance of sister chromatin cohesion at telomere at mitosis","type":"narrow"},{"name":"inhibition of maintenance of telomeric mitotic sister chromatin cohesion","type":"narrow"},{"name":"negative regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"negative regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:1904908"}


id: PBO:0065684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTTG1 interacting protein","termid":"PBO:0065684"}


id: PBO:0005671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase Dfr1","termid":"PBO:0005671"}


id: CHEBI:27365
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ion","termid":"CHEBI:27365"}


id: PBO:0004343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-Q","termid":"PBO:0004343"}


id: PBO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein coding overlap with adjacent gene","termid":"PBO:0001756"}


id: FYPO:0004746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly involved in chromatin silencing at the centromere outer repeat region does not occur.","definition_xrefs":["PomBase:mah","GO:0031507","PMID:24240238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly at centromere outer repeat during vegetative growth","termid":"FYPO:0003098"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat","synonyms":[{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere otr","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at pericentric region","type":"related"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at pericentromeric region","type":"related"},{"name":"heterochromatin assembly involved in chromatin silencing at centromere outer repeat abolished","type":"exact"}],"termid":"FYPO:0004746"}


id: PBO:0031211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lemon-shaped_cell","termid":"PBO:0031211"}


id: PR:O43013
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2G2.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.14","synonyms":[{"name":"Spom972h-csi1","type":"exact"}],"termid":"PR:O43013"}


id: GO:0048667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"neuron development","termid":"GO:0048666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell morphogenesis involved in neuron differentiation","synonyms":[{"name":"neuron morphogenesis involved in differentiation","type":"exact"}],"termid":"GO:0048667"}


id: PBO:0066456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 9, pseudogene","termid":"PBO:0066456"}


id: PBO:0077474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 196","termid":"PBO:0077474"}


id: PBO:0027339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-cysteine_ligase_activity","termid":"PBO:0027339"}


id: PBO:0067685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 2","termid":"PBO:0067685"}


id: GO:0007237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of Ssk2/Ssk22 proteins (obsolete GO:0007237)","synonyms":[{"name":"activation of Ssk2/Ssk22 proteins","type":"exact"}],"termid":"GO:0007237"}


id: PBO:0086957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of peroxisome abundance; peroxisomal membrane protein, remote homolog to several curvature-generating human proteins; functionally interacts with vesicle-budding-inducing ADP-ribosylation factor Arf1p","termid":"PBO:0086957"}


id: PBO:0027570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_pore_distribution_during_mitosis","termid":"PBO:0027570"}


id: PBO:0091179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermembrane lipid transfer protein, chorein family Vps1302","termid":"PBO:0091179"}


id: GO:0035119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the pelvic fin are generated and organized. The pelvic fins are bilaterally paired fins mounted in a ventral-lateral position on most fish. These fins are used primarily for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"},{"relation_name":"is_a","term_name":"pelvic fin morphogenesis","termid":"GO:0035139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic pelvic fin morphogenesis","termid":"GO:0035119"}


id: PBO:0082579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cholinephosphate cytidylyltransferase; a rate-determining enzyme of the CDP-choline pathway for phosphatidylcholine synthesis, inhibited by Sec14p, activated upon lipid-binding; controls phosphatidylcholine homeostasis; contains an element within the regulatory domain involved in both silencing and activation of enzymatic activity","termid":"PBO:0082579"}


id: PBO:0058772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7106","termid":"PBO:0058772"}


id: GO:0062210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regeneration process by which a damaged or lost shoot regrows or re-differentiates. This process may occur via de-differentiation and subsequent reprogramming of somatic cells or activation of existing undifferentiated (meristematic) cells to produce a new shoot meristem and subsequently a new shoot.","definition_xrefs":["PMID:27143753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot regeneration","synonyms":[{"name":"shoot system regeneration","type":"exact"}],"termid":"GO:0062210"}


id: PBO:0057330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520e","termid":"PBO:0057330"}


id: GO:0007147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the second meiotic division occurs in the female germline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis II","termid":"GO:0007135"},{"relation_name":"is_a","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"female meiosis II","synonyms":[{"name":"female meiosis II nuclear division","type":"exact"}],"termid":"GO:0007147"}


id: PBO:0079389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 3 class III pseudogene 1","termid":"PBO:0079389"}


id: PBO:0088256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (Cdc14-related) Clp1/Flp1","termid":"PBO:0088256"}


id: GO:0061080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the right horn of the sinus venosus from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"sinus venosus development","termid":"GO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right horn of sinus venosus development","termid":"GO:0061080"}


id: PBO:0054043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1381","termid":"PBO:0054043"}


id: PBO:0059080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoacylglycerol O-acyltransferase 3","termid":"PBO:0059080"}


id: PBO:0013799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sbunit composition, monomeric","termid":"PBO:0013799"}


id: PBO:0082261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amino acid transporter for valine, leucine, isoleucine, and tyrosine; low-affinity tryptophan and histidine transporter; overexpression confers FK506 and FTY720 resistance; protein abundance increases in response to DNA replication stress","termid":"PBO:0082261"}


id: GO:0052455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of jasmonic acid in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of jasmonic acid levels in symbiont (obsolete GO:0052455)","synonyms":[{"name":"modulation by organism of jasmonic acid levels in symbiont","type":"exact"}],"termid":"GO:0052455"}


id: PBO:0051178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-66","termid":"PBO:0051178"}


id: GO:1903395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary cell septum biogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23878277","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"regulates","term_name":"secondary cell septum biogenesis","termid":"GO:1990344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"regulation of secondary cell septum biogenesis","termid":"GO:1903395"}


id: PBO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.12","termid":"PBO:0005061"}


id: GO:2001244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic signaling pathway","termid":"GO:2001235"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway","synonyms":[{"name":"positive regulation of intrinsic apoptosis","type":"narrow"},{"name":"positive regulation of intrinsic apoptotic pathway","type":"exact"},{"name":"positive regulation of intrinsic apoptotic signalling pathway","type":"exact"},{"name":"positive regulation of mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:2001244"}


id: GO:0106088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell adhesion involved in sprouting angiogenesis.","definition_xrefs":["PMID:24177325","GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell adhesion involved in sprouting angiogenesis","termid":"GO:0120078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell adhesion involved in sprouting angiogenesis","termid":"GO:0106088"}


id: PBO:0109224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 5","termid":"PBO:0109224"}


id: PBO:0065691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine 5'-phosphatase","termid":"PBO:0065691"}


id: FYPO:0004898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate decarboxylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal pyruvate decarboxylase activity","termid":"FYPO:0004898"}


id: PBO:0042849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 58","termid":"PBO:0042849"}


id: GO:0048099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and/or maintenance of a lineage boundary between anterior and posterior compartments that cells cannot cross, thus separating the populations of cells in each compartment.","definition_xrefs":["PMID:10625531","GOC:jid","PMID:9374402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc lineage restriction","termid":"GO:0035161"},{"relation_name":"part_of","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior lineage restriction, imaginal disc","termid":"GO:0048099"}


id: PBO:0085831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery","termid":"PBO:0085831"}


id: PBO:0113372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with structural similarity to lipid transport protein Vps13p; localizes to multiple membrane contact sites between organelles; role in phospholipid homeostasis and lipidomic adaptation to cold; required for fermentation at low temperature; plays a role in phosphatidylethanolamine metabolism and secretory protein maturation; non-tagged protein is detected in highly purified mitochondria in HTP studies","termid":"PBO:0113372"}


id: FYPO:0001397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized to only the old end of a cell following cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar actin cortical patch localization during vegetative growth","termid":"FYPO:0001019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0004803","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"monopolar actin cortical patch localization to old end","synonyms":[{"name":"decreased actin cortical patch localization at non-growing end","type":"related"},{"name":"monopolar F-actin patch localization to old end","type":"exact"},{"name":"monopolar actin cortical patch localisation to old end","type":"exact"},{"name":"monopolar actin cortical patch localization to old end during mitotic cell cycle","type":"related"},{"name":"monopolar actin cortical patch localization to old end during vegetative growth","type":"exact"},{"name":"monopolar actin cortical patch location at old end","type":"related"},{"name":"monopolar actin patch localization to old end","type":"exact"},{"name":"reduced actin patch localization to non-growing cell end","type":"related"}],"termid":"FYPO:0001397"}


id: GO:0031352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plastid inner membrane (obsolete GO:0031352)","synonyms":[{"name":"intrinsic to plastid inner membrane","type":"narrow"}],"termid":"GO:0031352"}


id: GO:0033315
data:
  {"annotated_genes":["SJAG_02771","SJAG_00364","SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87453,102734,112238],"is_not":false,"summary":null,"term":"GO:0033315"}]},"cv_name":"biological_process","definition":"A signal transduction process that controls the G2/M1 transition of the meiotic cell cycle and prevents the initiation of nuclear division until DNA replication is complete.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication checkpoint signaling","termid":"GO:0000076"},{"relation_name":"is_a","term_name":"meiotic DNA integrity checkpoint signaling","termid":"GO:0044778"},{"relation_name":"is_a","term_name":"negative regulation of G2/MI transition of meiotic cell cycle","termid":"GO:0110031"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02771":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"meiotic G2/MI DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072440"],"synonyms":[{"name":"meiotic G2/MI DNA replication checkpoint","type":"exact"},{"name":"meiotic cell cycle DNA replication checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic DNA replication checkpoint","type":"exact"}],"termid":"GO:0033315","terms_by_termid":{"GO:0033315":null}}


id: PBO:0011424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate transmembrane transporter subunit Mpc2","termid":"PBO:0011424"}


id: GO:0048812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a neuron projection are generated and organized. A neuron projection is any process extending from a neural cell, such as axons or dendrites.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"},{"relation_name":"part_of","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection morphogenesis","synonyms":[{"name":"neurite biosynthesis","type":"narrow"},{"name":"neurite formation","type":"narrow"},{"name":"neurite growth","type":"narrow"},{"name":"neurite morphogenesis","type":"related"}],"termid":"GO:0048812"}


id: GO:1903070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:rph","GOC:TermGenie","GO_REF:0000058","PMID:17872946"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903070)","termid":"GO:1903070"}


id: PBO:0083080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Disaggregase; heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) to refold and reactivate previously denatured, aggregated proteins; responds to stresses including heat, ethanol, and sodium arsenite; involved in [PSI+] propagation; protein becomes more abundant and forms cytoplasmic foci in response to DNA replication stress; potentiated Hsp104p variants decrease TDP-43 proteotoxicity by eliminating its cytoplasmic aggregation","termid":"PBO:0083080"}


id: FYPO:0001980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA processing is normal (i.e. indistinguishable from wild type). RNA processing is the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.","definition_xrefs":["GO:0006396","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression phenotype","termid":"FYPO:0000142"},{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA processing","synonyms":[{"name":"normal RNA processing during mitotic cell cycle","type":"related"},{"name":"normal RNA processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001980"}


id: GO:1903215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to mitochondrion.","definition_xrefs":["GOC:TermGenie","PMID:21370995","GO_REF:0000058","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting to mitochondrion","termid":"GO:1903214"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization to mitochondrion","termid":"GO:1903748"},{"relation_name":"negatively_regulates","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein targeting to mitochondrion","synonyms":[{"name":"down regulation of mitochondrial protein import","type":"related"},{"name":"down regulation of mitochondrial translocation","type":"related"},{"name":"down regulation of protein import into mitochondrion","type":"exact"},{"name":"down regulation of protein targeting to mitochondria","type":"exact"},{"name":"down regulation of protein targeting to mitochondrion","type":"exact"},{"name":"down regulation of protein-mitochondrial targeting","type":"exact"},{"name":"down-regulation of mitochondrial protein import","type":"related"},{"name":"down-regulation of mitochondrial translocation","type":"related"},{"name":"down-regulation of protein import into mitochondrion","type":"exact"},{"name":"down-regulation of protein targeting to mitochondria","type":"exact"},{"name":"down-regulation of protein targeting to mitochondrion","type":"exact"},{"name":"down-regulation of protein-mitochondrial targeting","type":"exact"},{"name":"downregulation of mitochondrial protein import","type":"related"},{"name":"downregulation of mitochondrial translocation","type":"related"},{"name":"downregulation of protein import into mitochondrion","type":"exact"},{"name":"downregulation of protein targeting to mitochondria","type":"exact"},{"name":"downregulation of protein targeting to mitochondrion","type":"exact"},{"name":"downregulation of protein-mitochondrial targeting","type":"exact"},{"name":"inhibition of mitochondrial protein import","type":"related"},{"name":"inhibition of mitochondrial translocation","type":"related"},{"name":"inhibition of protein import into mitochondrion","type":"narrow"},{"name":"inhibition of protein targeting to mitochondria","type":"narrow"},{"name":"inhibition of protein targeting to mitochondrion","type":"narrow"},{"name":"inhibition of protein-mitochondrial targeting","type":"narrow"},{"name":"negative regulation of mitochondrial protein import","type":"related"},{"name":"negative regulation of mitochondrial translocation","type":"related"},{"name":"negative regulation of protein import into mitochondrion","type":"exact"},{"name":"negative regulation of protein targeting to mitochondria","type":"exact"},{"name":"negative regulation of protein-mitochondrial targeting","type":"exact"}],"termid":"GO:1903215"}


id: GO:0005504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a fatty acid, an aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"fatty acid binding","termid":"GO:0005504"}


id: PBO:0090188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps68","termid":"PBO:0090188"}


id: GO:0034979
data:
  {"annotated_genes":["SJAG_04039","SJAG_04186","SJAG_01075"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[86088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[100319,110589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[100321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-acetyl-L-lysyl-[protein] + NAD+ + H2O = L-lysyl-[protein] + 2''-O-acetyl-ADP-D-ribose + nicotinamide.","definition_xrefs":["GOC:mah","RHEA:43636","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lysine deacetylase activity","termid":"GO:0033558"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0033558","GO:0003824","GO:0016787","GO:0003674","GO:0019213"],"is_obsolete":false,"name":"NAD-dependent protein lysine deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3371467","Reactome:R-HSA-5211239","Reactome:R-HSA-5688294","Reactome:R-HSA-9667952","Reactome:R-HSA-5688289","Reactome:R-HSA-9620532","EC:2.3.1.286","Reactome:R-HSA-5685953"],"synonyms":[{"name":"NAD(+)-dependent protein deacetylase","type":"broad"},{"name":"NAD-dependent protein deacetylase activity","type":"broad"},{"name":"protein acetyllysine N-acetyltransferase","type":"broad"},{"name":"protein lysine deacetylase","type":"broad"}],"termid":"GO:0034979","terms_by_termid":{"GO:0032041":null,"GO:0046969":null,"GO:0046970":null,"GO:0140765":null}}


