# terms

id: PBO:0012061
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id: PBO:0030105
data:
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id: GO:0034195
data:
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id: GO:0008260
data:
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id: PBO:0085361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoprotein of the mRNA cap-binding complex; involved in translational control; repressor of cap-dependent translational initiation; translational activator of select mRNAs during filamentous growth; competes with eIF4G for binding to eIF4E","termid":"PBO:0085361"}


id: PBO:0068333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 40","termid":"PBO:0068333"}


id: GO:0140639
data:
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id: GO:0034289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a maltose stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to maltose","termid":"GO:0034286"},{"relation_name":"is_a","term_name":"detection of disaccharide stimulus","termid":"GO:0034288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of maltose stimulus","synonyms":[{"name":"perception of maltose stimulus","type":"related"}],"termid":"GO:0034289"}


id: PBO:0031099
data:
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id: PBO:0056976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 29a","termid":"PBO:0056976"}


id: PBO:0052701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 2","termid":"PBO:0052701"}


id: PBO:0069276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 532, pseudogene","termid":"PBO:0069276"}


id: GO:0006629
data:
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id: PBO:0078590
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id: GO:0102290
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id: PBO:0086911
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id: GO:0034068
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id: GO:0052919
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id: PBO:0081400
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id: GO:0018291
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id: GO:1990304
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id: PBO:0000208
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id: GO:1902475
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id: PBO:0072419
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id: FYPO:0005601
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id: PR:O14087
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id: PBO:0067510
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id: GO:0009186
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id: PBO:0043301
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id: GO:1902370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tRNA catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of tRNA metabolic process","termid":"GO:1903326"},{"relation_name":"regulates","term_name":"tRNA decay","termid":"GO:0016078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"regulation of tRNA catabolic process","synonyms":[{"name":"regulation of tRNA breakdown","type":"exact"},{"name":"regulation of tRNA catabolism","type":"exact"},{"name":"regulation of tRNA degradation","type":"exact"}],"termid":"GO:1902370"}


id: GO:0015956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a bis(5'-nucleosidyl) oligophosphate, a compound formed of two nucleosides joined together through their 5' carbons by a chain of phosphate molecules.","definition_xrefs":["PMID:10970777","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"bis(5'-nucleosidyl) oligophosphate metabolic process","synonyms":[{"name":"bis(5'-nucleosidyl) oligophosphate metabolism","type":"exact"}],"termid":"GO:0015956"}


id: GO:1903636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein insertion into mitochondrial outer membrane.","definition_xrefs":["PMID:16374546","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of protein targeting to mitochondrion","termid":"GO:1903214"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein insertion into mitochondrial outer membrane","termid":"GO:0045040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006605","GO:0008150","GO:0007005","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"regulation of protein insertion into mitochondrial outer membrane","synonyms":[{"name":"regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"regulation of protein transport into mitochondrial outer membrane","type":"exact"}],"termid":"GO:1903636"}


id: PBO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neurone disease","termid":"PBO:0000613"}


id: GO:0061801
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3B, beta3 and gamma2 polypeptide chains.","definition_xrefs":["GOC:dph","PMID:15979864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-5B complex","synonyms":[{"name":"laminin 3B32 complex","type":"exact"}],"termid":"GO:0061801"}


id: PBO:0047695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR heme transporter 2","termid":"PBO:0047695"}


id: PBO:0049297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 1","termid":"PBO:0049297"}


id: GO:0031267
data:
  {"annotated_genes":["SJAG_03085","SJAG_03470","SJAG_02998","SJAG_03693","SJAG_00525","SJAG_03662","SJAG_01943","SJAG_02661","SJAG_02012","SJAG_04400","SJAG_03002","SJAG_02833","SJAG_03959","SJAG_01358","SJAG_00968","SJAG_04733","SJAG_00279","SJAG_00864","SJAG_01789","SJAG_01909","SJAG_04703","SJAG_04366","SJAG_03229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57079,58507,58738,59970,60768,60850,60991,62452,63202,63839,64042,64078,65765,66643,67915,68025,70279,70892,72437,72870,73908,76262,77005],"is_not":false,"summary":null,"term":"GO:0031267"}]},"cv_name":"molecular_function","definition":"Binding to a small monomeric GTPase.","definition_xrefs":["GOC:mah","PMID:27218782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase binding","termid":"GO:0051020"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00525":null,"SJAG_00864":null,"SJAG_00968":null,"SJAG_01358":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_01943":null,"SJAG_02012":null,"SJAG_02661":null,"SJAG_02833":null,"SJAG_02998":null,"SJAG_03002":null,"SJAG_03085":null,"SJAG_03229":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04366":null,"SJAG_04400":null,"SJAG_04703":null,"SJAG_04733":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"small GTPase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0048365","GO:0017137","GO:0017049","GO:0008536","GO:0017016","GO:0017031","GO:0017048","GO:0034989","GO:0005084","GO:0017160","GO:0030306"],"synonyms":[{"name":"ADP-ribosylation factor binding","type":"narrow"},{"name":"ARF binding","type":"narrow"},{"name":"GTP-Ral binding","type":"narrow"},{"name":"GTP-Rho binding","type":"narrow"},{"name":"REP","type":"narrow"},{"name":"Rab GTPase binding","type":"narrow"},{"name":"Rab escort protein activity","type":"narrow"},{"name":"Rab interactor activity","type":"narrow"},{"name":"Rac GTPase binding","type":"narrow"},{"name":"Ral GTPase binding","type":"narrow"},{"name":"Ran GTPase binding","type":"narrow"},{"name":"Ran protein binding","type":"narrow"},{"name":"Ran-binding protein","type":"narrow"},{"name":"Ras GTPase binding","type":"narrow"},{"name":"Ras interactor activity","type":"narrow"},{"name":"Rho GTPase binding","type":"narrow"}],"termid":"GO:0031267","terms_by_termid":{"GO:0031267":null}}


id: PBO:0113049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class II abasic (AP) endonuclease involved in repair of DNA damage; also possesses 3'-diesterase and PCNA-stiimulated 3' to 5' exonuclease activities; resolves blocked 3' ends that result from removal of misincorporated nucleotides; frays and cleaves 3' DNA termini facilitating 3' DNA-end healing via endonucleolytic cleavage;  homolog of human APEX2 and E. coli exoIII","termid":"PBO:0113049"}


id: PBO:0086790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; transcribed during sporulation; null mutant exhibits increased resistance to rapamycin","termid":"PBO:0086790"}


id: PBO:0079085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 2-1","termid":"PBO:0079085"}


id: PBO:0054349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1742","termid":"PBO:0054349"}


id: PBO:0088859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3-containing 90S preribosome complex subunit Cms1","termid":"PBO:0088859"}


id: PBO:0090825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor Sac32","termid":"PBO:0090825"}


id: GO:0033846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + fluoride = 5'-deoxy-5'-fluoroadenosine + L-methionine.","definition_xrefs":["EC:2.5.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"adenosyl-fluoride synthase activity","secondary_identifiers":["RHEA:16661","MetaCyc:2.5.1.63-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:fluoride adenosyltransferase activity","type":"related"},{"name":"fluorinase activity","type":"related"}],"termid":"GO:0033846"}


id: PBO:0070631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 2","termid":"PBO:0070631"}


id: PBO:0073405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 8","termid":"PBO:0073405"}


id: PBO:0072111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14","termid":"PBO:0072111"}


id: PBO:0029972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_hydroxyurea","termid":"PBO:0029972"}


id: PBO:0078268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 4-1","termid":"PBO:0078268"}


id: PBO:0078454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 6 (pseudogene)","termid":"PBO:0078454"}


id: PBO:0079968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 6","termid":"PBO:0079968"}


id: PBO:0069428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 693, pseudogene","termid":"PBO:0069428"}


id: PBO:0071301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 24","termid":"PBO:0071301"}


id: PBO:0074209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 2","termid":"PBO:0074209"}


id: PBO:0059505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome c oxidase I","termid":"PBO:0059505"}


id: PBO:0074929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 96B","termid":"PBO:0074929"}


id: GO:1905828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of prostaglandin catabolic process.","definition_xrefs":["PMID:12432938","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"prostaglandin catabolic process","termid":"GO:1905344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of prostaglandin catabolic process","synonyms":[{"name":"regulation of prostaglandin breakdown","type":"exact"},{"name":"regulation of prostaglandin catabolism","type":"exact"},{"name":"regulation of prostaglandin degradation","type":"exact"}],"termid":"GO:1905828"}


id: GO:1901053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sarcosine.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:17951379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"sarcosine metabolic process","termid":"GO:1901052"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"sarcosine catabolic process","synonyms":[{"name":"sarcosine breakdown","type":"exact"},{"name":"sarcosine catabolism","type":"exact"},{"name":"sarcosine degradation","type":"exact"}],"termid":"GO:1901053"}


id: PBO:0113399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine hydrolase; likely target of Cyc8p-Tup1p-Rfx1p transcriptional regulation; localizes to cytosol and peroxisomes; similar to S. cerevisiae Fsh1p and Fsh2p and the human candidate tumor suppressor OVCA2","termid":"PBO:0113399"}


id: PBO:0052191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily M regulatory beta subunit 1","termid":"PBO:0052191"}


id: PBO:0055013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2428","termid":"PBO:0055013"}


id: PBO:0028267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_RNA_level","termid":"PBO:0028267"}


id: GO:0048285
data:
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id: PBO:0004142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Prp17","termid":"PBO:0004142"}


id: GO:0061824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an axoneme is exposed entirely or partially to the cytoplasm or by which the cytoplasmic portion is assembled or extended. Cytosolic ciliogenesis can occur following compartmentalized ciliogenesis, in which the cilium is formed within a compartment separated from the cytoplasm.","definition_xrefs":["PMID:25447994","PMID:26654377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cytosolic ciliogenesis","synonyms":[{"name":"intracellular ciliogenesis","type":"related"}],"termid":"GO:0061824"}


id: GO:0072355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a threonine residue at position 3 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-T3 phosphorylation (obsolete GO:0072355)","termid":"GO:0072355"}


id: GO:0001786
data:
  {"annotated_genes":["SJAG_02572","SJAG_04077"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84028,98530],"is_not":false,"summary":null,"term":"GO:0001786"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine.","definition_xrefs":["PMID:12000961","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02572":null,"SJAG_04077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"phosphatidylserine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001786","terms_by_termid":{"GO:0001786":null}}


id: PBO:0078468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-6","termid":"PBO:0078468"}


id: GO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exonucleolytic digestion of a pre-rRNA molecule in the process to generate a mature rRNA molecule.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic trimming involved in rRNA processing (obsolete GO:0000459)","synonyms":[{"name":"exonucleolytic trimming during rRNA processing","type":"related"}],"termid":"GO:0000459"}


id: PBO:0057807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3129","termid":"PBO:0057807"}


id: FYPO:0006889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of iron ion measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular iron level","synonyms":[{"name":"decreased cellular iron ion level","type":"exact"},{"name":"decreased cellular iron level during mitotic cell cycle","type":"related"},{"name":"decreased cellular iron level during vegetative growth","type":"exact"},{"name":"decreased iron accumulation","type":"related"},{"name":"reduced cellular iron level","type":"exact"}],"termid":"FYPO:0006889"}


id: FYPO:0001310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal viability in stationary phase","synonyms":[{"name":"normal cell population viability in stationary phase","type":"exact"},{"name":"normal chronological cell aging","type":"related"},{"name":"normal chronological lifespan","type":"related"}],"termid":"FYPO:0001310"}


id: PBO:0066125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 4","termid":"PBO:0066125"}


id: PBO:0003923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (predicted)","termid":"PBO:0003923"}


id: PBO:0067784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 86","termid":"PBO:0067784"}


id: FYPO:0003568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of a spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the nucleus. An open fenestra remains present in the nuclear envelope.","definition_xrefs":["PMID:24963130","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","synonyms":[{"name":"SPB unanchored to nuclear envelope","type":"related"},{"name":"abnormal establishment of mitotic spindle pole body localization to nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during vegetative growth","type":"exact"},{"name":"spindle pole body in nucleoplasm, unanchored to nuclear envelope","type":"related"},{"name":"spindle pole body unanchored to nuclear envelope","type":"related"},{"name":"unanchored spindle pole bodies","type":"related"}],"termid":"FYPO:0003568"}


id: GO:0042021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a granulocyte macrophage colony-stimulating factor complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor complex binding","synonyms":[{"name":"GM-CSF complex binding","type":"exact"},{"name":"GMC-SF complex binding","type":"exact"},{"name":"granulocyte macrophage colony stimulating factor complex binding","type":"exact"}],"termid":"GO:0042021"}


id: PBO:0065756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pygopus family PHD finger 1","termid":"PBO:0065756"}


id: PBO:0035930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K4_methylation_during_vegetative_growth","termid":"PBO:0035930"}


id: GO:0010484
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  {"annotated_genes":["SJAG_01204","SJAG_02773","SJAG_02990","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87437],"is_not":false,"summary":null,"term":"GO:0010484"},{"annotations":[87438,86791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[87439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[95051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[105466,105467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[87440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 = CoA + acetyl-histone H3.","definition_xrefs":["PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase activity","termid":"GO:0004402"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01204":null,"SJAG_02165":null,"SJAG_02773":null,"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0034212","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H3 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H3 histone acetylase activity","type":"exact"},{"name":"H3 histone acetyltransferase activity","type":"exact"}],"termid":"GO:0010484","terms_by_termid":{"GO:0010484":null,"GO:0032931":null,"GO:0036408":null,"GO:0043992":null,"GO:0043993":null,"GO:0044016":null}}


id: GO:0022809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Small molecule produced by bacteria that carries an ion across the membrane by enclosing the ion and travelling with the ion across the membrane. It does not form a fully open pore across the membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"mobile ion carrier activity","synonyms":[{"name":"ionophore","type":"broad"}],"termid":"GO:0022809"}


id: GO:0046153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ommochromes, any of a large group of natural polycyclic pigments commonly found in the Arthropoda, particularly in the ommatidia of the compound eye.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"eye pigment catabolic process","termid":"GO:0046151"},{"relation_name":"is_a","term_name":"ommochrome metabolic process","termid":"GO:0046152"},{"relation_name":"is_a","term_name":"ocellus pigment catabolic process","termid":"GO:0046159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ommochrome catabolic process","synonyms":[{"name":"ommochrome breakdown","type":"exact"},{"name":"ommochrome catabolism","type":"exact"},{"name":"ommochrome degradation","type":"exact"}],"termid":"GO:0046153"}


id: PBO:0005848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate semialdehyde dehydrogenase (predicted)","termid":"PBO:0005848"}


id: GO:0004660
data:
  {"annotated_genes":["SJAG_04923","SJAG_02583"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86580,86581,97490,97491],"is_not":false,"summary":null,"term":"GO:0004660"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate.","definition_xrefs":["PMID:8621375","EC:2.5.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein farnesyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9647978","MetaCyc:RXN-17573","GO:0018223","RHEA:13345","Reactome:R-HSA-2530501"],"synonyms":[{"name":"CAAX farnesyltransferase activity","type":"narrow"},{"name":"FTase activity","type":"related"},{"name":"farnesyl-diphosphate:protein-cysteine farnesyltransferase activity","type":"related"},{"name":"protein-cysteine farnesyltransferase activity","type":"exact"}],"termid":"GO:0004660","terms_by_termid":{"GO:0004660":null}}


id: PBO:0017985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug20","termid":"PBO:0017985"}


id: PBO:0005385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 5","termid":"PBO:0005385"}


id: PBO:0014595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP4 complex subunit Psy2 (predicted)","termid":"PBO:0014595"}


id: PBO:0090748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II binding AAA family ATPase Npa3","termid":"PBO:0090748"}


id: PBO:0079018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 1-1","termid":"PBO:0079018"}


id: PATO:0000474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000474 shattering value (obsolete PATO:0000474)","termid":"PATO:0000474"}


id: PBO:0074343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 2","termid":"PBO:0074343"}


id: GO:0038071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein + ATP = protein phosphate + ADP by a mitogen-activated protein kinase, as part of a MAPK signaling cascade that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase activity involved in conjugation with cellular fusion (obsolete GO:0038071)","synonyms":[{"name":"MAPK activity involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0038071"}


id: GO:0070545
data:
  {"annotated_genes":["SJAG_00882","SJAG_02830","SJAG_02759"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96488,102120,106952],"is_not":false,"summary":null,"term":"GO:0070545"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in coordinating ribosome biogenesis with cell cycle progression. In human, it is composed of Pes1, Bop1, and WDR12; in Saccharomyces the proteins are known as Nop7p, Erb1 and Ytm1 respectively.","definition_xrefs":["GOC:mah","PMID:16043514","PMID:17353269","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00882":null,"SJAG_02759":null,"SJAG_02830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0030684","GO:0005730","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"PeBoW complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070545","terms_by_termid":{"GO:0070545":null}}


id: PBO:0074436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 36","termid":"PBO:0074436"}


id: FYPO:0003594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal anaphase-promoting complex-dependent protein catabolic process","synonyms":[{"name":"normal anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during mitotic cell cycle","type":"related"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during vegetative growth","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein degradation","type":"exact"}],"termid":"FYPO:0003594"}


id: GO:0021746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the solitary nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"solitary nucleus development","termid":"GO:0021746"}


id: PBO:0091003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4451 family conserved fungal protein","termid":"PBO:0091003"}


id: PBO:0041024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 9, pseudogene","termid":"PBO:0041024"}


id: PBO:0059636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 2","termid":"PBO:0059636"}


id: GO:1903378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidative stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron apoptotic process","termid":"GO:0043525"},{"relation_name":"is_a","term_name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902177"},{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903376"},{"relation_name":"positively_regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0036480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"activation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"activation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"positive regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"positive regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"up regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up-regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"up-regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"upregulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"upregulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1903378"}


id: PBO:0052702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 3","termid":"PBO:0052702"}


id: GO:0019432
data:
  {"annotated_genes":["SJAG_03609","SJAG_03162","SJAG_04041","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86067,87485,108221,110356],"is_not":false,"summary":null,"term":"GO:0019432"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a triglyceride, any triester of glycerol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol biosynthetic process","termid":"GO:0046463"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triglyceride biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRIGLSYN-PWY"],"synonyms":[{"name":"triacylglycerol biosynthesis","type":"exact"},{"name":"triacylglycerol biosynthetic process","type":"exact"},{"name":"triglyceride anabolism","type":"exact"},{"name":"triglyceride biosynthesis","type":"exact"},{"name":"triglyceride formation","type":"exact"},{"name":"triglyceride synthesis","type":"exact"}],"termid":"GO:0019432","terms_by_termid":{"GO:0019432":null}}


id: GO:0008293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to torso (a receptor tyrosine kinase) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:8343949","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"torso signaling pathway","synonyms":[{"name":"torso signalling pathway","type":"exact"}],"termid":"GO:0008293"}


id: PBO:0003373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar polyphosphatase (predicted)","termid":"PBO:0003373"}


id: PBO:0081745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 675","termid":"PBO:0081745"}


id: GO:0035757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 19.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 19 binding","synonyms":[{"name":"CCL19 binding","type":"exact"}],"termid":"GO:0035757"}


id: PBO:0006189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_during","termid":"PBO:0006189"}


id: PBO:0045398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 3","termid":"PBO:0045398"}


id: PBO:0011979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rad55/Rhp55","termid":"PBO:0011979"}


id: GO:0044480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of blood mast cell degranulation in the bitten organism.","definition_xrefs":["GOC:jl","PMID:21549739","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of mast cell degranulation in another organism","termid":"GO:0044479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of mast cell degranulation in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0044480"}


id: PBO:0027364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_DNA_damage_during_mitotic_S_phase","termid":"PBO:0027364"}


id: GO:0070308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a lens fiber cell. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["PMID:7693735","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell fate commitment","synonyms":[{"name":"lens fibre cell fate commitment","type":"exact"}],"termid":"GO:0070308"}


id: GO:0097162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MADS box domain, a protein domain that encodes the DNA-binding MADS domain. The MADS domain binds to DNA sequences of high similarity to the motif CC[A/T]6GG termed the CArG-box. MADS-domain proteins are generally transcription factors. The length of the MADS-box is in the range of 168 to 180 base pairs.","definition_xrefs":["InterPro:IPR002100","Wikipedia:MADS-box","PMID:18296735","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MADS box domain binding","termid":"GO:0097162"}


id: PBO:0011525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis","termid":"PBO:0011525"}


id: PBO:0088873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg24c","termid":"PBO:0088873"}


id: FYPO:0002873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in the normal orientation perpendicular the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal septum location","termid":"FYPO:0002253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal septum orientation","synonyms":[{"name":"normal septum orientation during mitotic cell cycle","type":"related"},{"name":"normal septum orientation during vegetative growth","type":"exact"},{"name":"normal septum position","type":"related"}],"termid":"FYPO:0002873"}


id: PBO:0048315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 26","termid":"PBO:0048315"}


id: GO:0016445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of immunoglobulins.","definition_xrefs":["GOC:add","ISBN:0781735149","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"part_of","term_name":"immunoglobulin production","termid":"GO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immunoglobulins","synonyms":[{"name":"somatic diversification of antibodies","type":"exact"}],"termid":"GO:0016445"}


id: GO:0034692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that comprises three core spliceosomal proteins, designated E, F, and G. Formation of the E.F.G complex is essential but not sufficient for the formation of a stable U1 snRNP complex.","definition_xrefs":["PMID:8641291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"E.F.G complex","termid":"GO:0034692"}


id: PBO:0043472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 9","termid":"PBO:0043472"}


id: PBO:0071473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 14","termid":"PBO:0071473"}


id: PBO:0089789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk16","termid":"PBO:0089789"}


id: PBO:0045950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like domain multiple 6","termid":"PBO:0045950"}


id: GO:0034594
data:
  {"annotated_genes":["SJAG_03131","SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016314"},{"annotations":[104442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylinositol trisphosphate + H2O = phosphatidylinositol bisphosphate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_03131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol trisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034594","terms_by_termid":{"GO:0016314":null,"GO:0034485":null}}


id: FYPO:0001714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malate into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal malate import","termid":"FYPO:0001713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased malate import","synonyms":[{"name":"decreased malate import across plasma membrane","type":"exact"},{"name":"decreased malate import during mitotic cell cycle","type":"related"},{"name":"decreased malate import during vegetative growth","type":"exact"},{"name":"decreased malate import into cell","type":"exact"},{"name":"decreased malate uptake","type":"exact"},{"name":"decreased malic acid import","type":"related"},{"name":"reduced malate import","type":"exact"}],"termid":"FYPO:0001714"}


id: GO:0000210
data:
  {"annotated_genes":["SJAG_03091"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101236],"is_not":false,"summary":null,"term":"GO:0000210"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + H2O = AMP + NMN.","definition_xrefs":["RHEA:11800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide phosphatase activity","termid":"GO:0004551"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03091":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NAD+ diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.22","MetaCyc:NADPYROPHOSPHAT-RXN"],"synonyms":[{"name":"NAD diphosphatase activity","type":"broad"},{"name":"NAD pyrophosphatase activity","type":"broad"},{"name":"NAD(+) pyrophosphatase activity","type":"exact"},{"name":"NAD+ phosphohydrolase activity","type":"exact"},{"name":"NAD+ pyrophosphatase activity","type":"exact"},{"name":"NADP pyrophosphatase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide pyrophosphatase activity","type":"related"}],"termid":"GO:0000210","terms_by_termid":{"GO:0000210":null}}


id: PBO:0069336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 596, pseudogene","termid":"PBO:0069336"}


id: PBO:0083983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine-fructose-6-phosphate amidotransferase; catalyzes the formation of glucosamine-6-P and glutamate from fructose-6-P and glutamine in the first step of chitin biosynthesis; GFA1 has a paralogous region, comprising ORFs YMR084W-YMR085W, that arose from the whole genome duplication","termid":"PBO:0083983"}


id: GO:0098642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen trimer that forms networks.","definition_xrefs":["PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"collagen network","termid":"GO:0098645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"network-forming collagen trimer","termid":"GO:0098642"}


id: PBO:0027767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytosolic_calcium_level","termid":"PBO:0027767"}


id: PBO:0061438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor 2C2 associated protein","termid":"PBO:0061438"}


id: PR:O60080
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX56 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05031","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.06c","secondary_identifiers":["UniProtKB:O60080"],"synonyms":[{"name":"Spom972h-DDX56","type":"exact"}],"termid":"PR:O60080"}


id: PATO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating gradually in a rounded end.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharpness","termid":"PATO:0000944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blunt","termid":"PATO:0001950"}


id: GO:0099134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a sorocarp formed by aggregation of cells with different genotypes.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorocarp development","termid":"GO:0030587"},{"relation_name":"is_a","term_name":"chimeric non-reproductive fruiting body development","termid":"GO:0099136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chimeric sorocarp development","termid":"GO:0099134"}


id: PR:Q9Y7R3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A condensin complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.03c","secondary_identifiers":["UniProtKB:Q9Y7R3"],"synonyms":[{"name":"CAPH homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NCAPH","type":"exact"},{"name":"barren homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p105 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:Q9Y7R3"}


id: GO:0048251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching.","definition_xrefs":["PMID:12615674","PMID:10841810","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix assembly","termid":"GO:0085029"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"elastic fiber assembly","synonyms":[{"name":"elastic fibre assembly","type":"exact"},{"name":"elastin fiber assembly","type":"exact"},{"name":"elastin fibre assembly","type":"exact"}],"termid":"GO:0048251"}


id: PBO:0052061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 2A","termid":"PBO:0052061"}


id: PBO:0077602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11D","termid":"PBO:0077602"}


id: FYPO:0002557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex is decreased in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex during vegetative growth","termid":"FYPO:0000929"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to medial cortex during vegetative growth","synonyms":[{"name":"decreased protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to medial ring during vegetative growth","type":"exact"},{"name":"reduced protein localization to medial cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0002557"}


id: PBO:0087694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes protein asparagine-linked glycosylation; type I membrane protein required for incorporation of Ost3p or Ost6p into the OST complex","termid":"PBO:0087694"}


id: PBO:0029943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_elongated_germ_tube_and_cell_lysis","termid":"PBO:0029943"}


id: GO:0002719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of cytokine production contributing to an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"negative regulation of production of molecular mediator of immune response","termid":"GO:0002701"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"negatively_regulates","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokine production involved in immune response","secondary_identifiers":["GO:0002743","GO:0002740"],"synonyms":[{"name":"down regulation of cytokine production during immune response","type":"related"},{"name":"down-regulation of cytokine production during immune response","type":"exact"},{"name":"downregulation of cytokine production during immune response","type":"related"},{"name":"inhibition of cytokine production during immune response","type":"related"},{"name":"negative regulation of cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"negative regulation of cytokine production during immune response","type":"related"},{"name":"negative regulation of cytokine secretion involved in immune response","type":"narrow"}],"termid":"GO:0002719"}


id: FYPO:0004755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the minus ends of microtubules is abnormal.","definition_xrefs":["PMID:25987607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to microtubule minus-end","synonyms":[{"name":"abnormal protein localisation to microtubule minus-end","type":"exact"},{"name":"abnormal protein localization to microtubule minus end","type":"exact"},{"name":"abnormal protein localization to microtubule minus-end during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to microtubule minus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0004755"}


id: PBO:0070304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 10","termid":"PBO:0070304"}


id: GO:0106003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in modulation of signaling and synaptic function in the brain, predominantly in the cerebral cortex and hippocampus. Forms dimers and multimers of amyloid beta peptide 40 and peptide 42 (proteolytic cleavage products of amyloid beta A4 protein, also known as amyloid beta precursor protein). Mostly found in the extracellular space with a proportion occurring as membrane-bound species. Influences synaptic plasticity through various receptors, mediates dendritic spine loss leading to decreased synapse density, inhibits long-term potentiation (LTP) and enhances long-term depression (LTD). Soluble multimeric form is the main pathogenic species linked to Alzheimer's disease.","definition_xrefs":["GOC:bhm","PMID:18568035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"amyloid-beta complex","synonyms":[{"name":"ADDL complex","type":"narrow"},{"name":"Abeta complex","type":"exact"},{"name":"Abeta-derived diffusible ligand complex","type":"narrow"},{"name":"amyloid beta complex","type":"exact"},{"name":"amyloid beta dimer","type":"narrow"},{"name":"amyloid beta heterodimer","type":"narrow"},{"name":"amyloid beta heterooligomer","type":"narrow"},{"name":"amyloid beta heterotrimer","type":"narrow"},{"name":"amyloid beta homodimer","type":"narrow"},{"name":"amyloid beta homooligomer","type":"narrow"},{"name":"amyloid beta homotrimer","type":"narrow"},{"name":"amyloid beta oligomer","type":"narrow"},{"name":"amyloid beta trimer","type":"narrow"},{"name":"amyloid-beta protein 40 complex","type":"narrow"},{"name":"amyloid-beta protein 40/42 complex","type":"narrow"},{"name":"amyloid-beta protein 42 complex","type":"narrow"},{"name":"beta amyloid complex","type":"exact"},{"name":"beta-amyloid complex","type":"exact"},{"name":"betaA complex","type":"exact"},{"name":"heterodimer of amyloid beta protein","type":"narrow"},{"name":"heterooligomer of amyloid beta protein","type":"narrow"},{"name":"heterotrimer of amyloid beta protein","type":"narrow"},{"name":"homodimer of amyloid beta protein","type":"narrow"},{"name":"homooligomer of amyloid beta protein","type":"narrow"},{"name":"homotrimer of amyloid beta protein","type":"narrow"}],"termid":"GO:0106003"}


id: PBO:0024836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Nop9 (predicted)","termid":"PBO:0024836"}


id: PBO:0054889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2303","termid":"PBO:0054889"}


id: GO:0042363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"vitamin catabolic process","termid":"GO:0009111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006766","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fat-soluble vitamin catabolic process","synonyms":[{"name":"fat-soluble vitamin breakdown","type":"exact"},{"name":"fat-soluble vitamin catabolism","type":"exact"},{"name":"fat-soluble vitamin degradation","type":"exact"}],"termid":"GO:0042363"}


id: GO:0060986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a hormone into the circulatory system.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"part_of","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"endocrine hormone secretion","termid":"GO:0060986"}


id: GO:0052736
data:
  {"annotated_genes":["SJAG_01017","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96238,90069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052861"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of linkages in beta-D-glucans; beta-glucans are polysaccharides of D-glucose monomers linked by beta-glycosidic bonds.","definition_xrefs":["Wikipedia:Beta-glucan"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"beta-glucanase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"beta-D-glucanase activity","type":"exact"}],"termid":"GO:0052736","terms_by_termid":{"GO:0052861":null}}


id: PBO:0076037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 33 pseudogene 1","termid":"PBO:0076037"}


id: FYPO:0007356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which Smp focus formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:31811152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal Smp focus formation","synonyms":[{"name":"normal Sme2 focus formation","type":"narrow"},{"name":"normal Smp dot formation","type":"exact"},{"name":"normal Smp focus assembly","type":"exact"}],"termid":"FYPO:0007356"}


id: GO:0035162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stages of blood cell formation that take place within the embryo.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic hemopoiesis","synonyms":[{"name":"embryonic haematopoiesis","type":"exact"},{"name":"embryonic haemopoiesis","type":"exact"},{"name":"embryonic hematopoiesis","type":"exact"}],"termid":"GO:0035162"}


id: PATO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being out of its usual or proper place, or position.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced","termid":"PATO:0002181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dislocated","secondary_identifiers":["PATO:0001479","PATO:0002158","PATO:0002159"],"synonyms":[{"name":"dislocation","type":"exact"},{"name":"luxated","type":"exact"},{"name":"luxation","type":"exact"},{"name":"relational dislocated quality","type":"exact"}],"termid":"PATO:0001852"}


id: PBO:0060140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mechanistic target of rapamycin kinase","termid":"PBO:0060140"}


id: GO:0003408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the optic cup, a two-walled vesicle formed from the optic vesicle.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup formation involved in camera-type eye development","termid":"GO:0003408"}


id: GO:0051468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which a glucocorticoid hormone stimulus is received by a cell and converted into a molecular signal. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"detection of steroid hormone stimulus","termid":"GO:0051467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of glucocorticoid hormone stimulus","termid":"GO:0051468"}


id: PBO:0091527
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces MicroProtein","termid":"PBO:0091527"}


id: PBO:0047814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N3","termid":"PBO:0047814"}


id: PBO:0063547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal trans-2-enoyl-CoA reductase","termid":"PBO:0063547"}


id: PBO:0031886
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RFC5","termid":"PBO:0031886"}


id: PBO:0086971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of Cdc7p-Dbf4p kinase complex; required for Cdc7p kinase activity and initiation of DNA replication; phosphorylates the Mcm2-7 family of proteins; cell cycle regulated; relative distribution to the nucleus increases upon DNA replication stress; co-expression of human CDC7 and DBF4 complements single cdc7 or dbf4 null mutations or the cdc7 dbf4 double null mutation","termid":"PBO:0086971"}


id: PBO:0005440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exonuclease for RNA 3' ss-tail","termid":"PBO:0005440"}


id: GO:0072334
data:
  {"annotated_genes":["SJAG_04697","SJAG_01177","SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108531,111739],"is_not":false,"summary":null,"term":"GO:0072334"},{"annotations":[84404,111738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"}]},"cv_name":"biological_process","definition":"The process in which UDP-galactose is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01177":null,"SJAG_04162":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"UDP-galactose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015785"],"synonyms":[{"name":"UDP-galactose membrane transport","type":"exact"},{"name":"UDP-galactose transport","type":"related"}],"termid":"GO:0072334","terms_by_termid":{"GO:0072334":null,"GO:0097624":null}}


id: PATO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's not being compact or dense in arrangement.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loose","termid":"PATO:0001802"}


id: RO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in","termid":"RO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"role_of","termid":"RO:0000081"}


id: PBO:0056247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane anchored junction protein","termid":"PBO:0056247"}


id: GO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein complex assembly process that contributes to protein import into the nucleus, and that results in the association of a cargo protein, a carrier protein such as an importin alpha/beta heterodimer, and a nucleoporin located at the periphery of the nuclear pore complex.","definition_xrefs":["PMID:9126736","GOC:isa_complete","GOC:mah","PMID:7878057","PMID:14570049"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into nucleus, docking (obsolete GO:0000059)","synonyms":[{"name":"protein docking during protein import into nucleus","type":"exact"},{"name":"protein docking during protein transport from cytoplasm to nucleus","type":"exact"},{"name":"protein docking during protein-nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus, docking","type":"exact"},{"name":"protein-nucleus import, docking","type":"exact"}],"termid":"GO:0000059"}


id: PBO:0064289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen like A (pseudogene)","termid":"PBO:0064289"}


id: PBO:0044356
data:
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id: GO:0019356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinate nucleotide from other compounds, including tryptophan.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolalkylamine metabolic process","termid":"GO:0006586"},{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"nicotinate nucleotide biosynthetic process","termid":"GO:0019357"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nicotinate nucleotide biosynthetic process from tryptophan","synonyms":[{"name":"nicotinate nucleotide anabolism from tryptophan","type":"exact"},{"name":"nicotinate nucleotide formation from tryptophan","type":"exact"},{"name":"nicotinate nucleotide synthesis from tryptophan","type":"exact"}],"termid":"GO:0019356"}


id: PBO:0002722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYF domain protein","termid":"PBO:0002722"}


id: GO:0002881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chronic inflammatory response","termid":"GO:0002677"},{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002880"},{"relation_name":"negatively_regulates","term_name":"chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chronic inflammatory response to non-antigenic stimulus","synonyms":[{"name":"down regulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"down-regulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"downregulation of chronic inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"inhibition of chronic inflammatory response to non-antigenic stimulus","type":"narrow"}],"termid":"GO:0002881"}


id: GO:0045612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hemocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"positively_regulates","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemocyte differentiation","synonyms":[{"name":"activation of hemocyte differentiation","type":"narrow"},{"name":"positive regulation of arthropod blood cell differentiation","type":"exact"},{"name":"stimulation of hemocyte differentiation","type":"narrow"},{"name":"up regulation of hemocyte differentiation","type":"exact"},{"name":"up-regulation of hemocyte differentiation","type":"exact"},{"name":"upregulation of hemocyte differentiation","type":"exact"}],"termid":"GO:0045612"}


id: FYPO:0004102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of polyubiquitination of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination during vegetative growth","termid":"FYPO:0002768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein polyubiquitination during vegetative growth","synonyms":[{"name":"decreased protein multiubiquitination during vegetative growth","type":"exact"},{"name":"decreased protein polyubiquitination during mitotic cell cycle","type":"related"},{"name":"decreased protein polyubiquitinylation during vegetative growth","type":"exact"},{"name":"decreased protein polyubiquitylation during vegetative growth","type":"exact"},{"name":"reduced protein polyubiquitination during vegetative growth","type":"exact"}],"termid":"FYPO:0004102"}


id: GO:0003122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vasodilation process resulting from secretion of norepinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-mediated vasodilation","secondary_identifiers":["GO:0003126","GO:0003125"],"synonyms":[{"name":"regulation of vasodilation by circulating noradrenaline","type":"related"},{"name":"regulation of vasodilation by circulating norepinephrine","type":"related"},{"name":"regulation of vasodilation by neuronal noradrenaline","type":"related"},{"name":"regulation of vasodilation by neuronal norepinephrine","type":"related"},{"name":"regulation of vasodilation by noradrenaline","type":"related"},{"name":"regulation of vasodilation by norepinephrine","type":"related"}],"termid":"GO:0003122"}


id: PBO:0044161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 pseudogene 1","termid":"PBO:0044161"}


id: PBO:0004587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp104 (predicted)","termid":"PBO:0004587"}


id: PBO:0081638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 566","termid":"PBO:0081638"}


id: PATO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of dark orange, red, of very low intensity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Brown"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brown","termid":"PATO:0000952"}


id: PATO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000157 absolute temporal (obsolete PATO:0000157)","termid":"PATO:0000157"}


id: FYPO:0002080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to N-tosyl-L-phenylalanyl chloromethyl ketone (TPCK). Cells stop growing (and may die) at a concentration of TPCK that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to protease inhibitor","termid":"FYPO:0001695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to TPCK","synonyms":[{"name":"hypersensitive to TPCK","type":"exact"},{"name":"sensitive to N-tosyl-L-phenylalanyl chloromethyl ketone","type":"exact"},{"name":"sensitive to TPCK during mitotic cell cycle","type":"related"},{"name":"sensitive to TPCK during vegetative growth","type":"exact"}],"termid":"FYPO:0002080"}


id: PBO:0030211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_heat","termid":"PBO:0030211"}


id: PBO:0027182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere_outer_repeat","termid":"PBO:0027182"}


id: PR:Q9UTJ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu1-1 gene.","definition_xrefs":["UniProtKB:Q9UTJ3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 1/2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.06","synonyms":[{"name":"Spom972h-meu1-1","type":"exact"}],"termid":"PR:Q9UTJ3"}


id: PBO:0071180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 21","termid":"PBO:0071180"}


id: PBO:0082265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminophospholipid translocase (flippase); type 4 P-type ATPase; involved in phospholipid translocation, contributing to endocytosis, protein transport, and cellular polarization; localizes primarily to the plasma membrane; localizes to the shmoo tip where it has a redundant role in the cellular response to mating pheromone; DNF1 has a paralog, DNF2, that arose from the whole genome duplication","termid":"PBO:0082265"}


id: GO:0045248
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cytosolic complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) (E1), dihydrolipoamide S-succinyltransferase (E2) and dihydrolipoamide dehydrogenase (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2).","definition_xrefs":["GOC:mtg_sensu","PMID:10848975"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic oxoglutarate dehydrogenase complex (obsolete GO:0045248)","termid":"GO:0045248"}


id: GO:0019562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of L-phenylalanine into other compounds, including phosphoenolpyruvate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete L-phenylalanine catabolic process to phosphoenolpyruvate (obsolete GO:0019562)","secondary_identifiers":["MetaCyc:PHENYLALANINE-DEG1-PWY"],"synonyms":[{"name":"phenylalanine breakdown to phosphoenolpyruvate","type":"exact"},{"name":"phenylalanine degradation to phosphoenolpyruvate","type":"exact"}],"termid":"GO:0019562"}


id: PBO:0048118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"furin, paired basic amino acid cleaving enzyme","termid":"PBO:0048118"}


id: FYPO:0001818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoribosylformylglycinamidine cyclo-ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal phosphoribosylformylglycinamidine cyclo-ligase activity","synonyms":[{"name":"abnormal AIR synthase activity","type":"exact"},{"name":"abnormal AIR synthetase activity","type":"exact"}],"termid":"FYPO:0001818"}


id: GO:0047269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: poly(ribitol phosphate) + UDP-N-acetyl-D-glucosamine = N-acetyl-D-glucosaminyl-poly(ribitol phosphate) + UDP.","definition_xrefs":["EC:2.4.1.70","MetaCyc:2.4.1.70-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"poly(ribitol-phosphate) N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.53-RXN","RHEA:21012"],"synonyms":[{"name":"UDP acetylglucosamine-poly(ribitol phosphate) acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:poly(ribitol-phosphate) N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-poly(ribitol phosphate) acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047269"}


id: PBO:0066324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RC3H1 divergent transcript","termid":"PBO:0066324"}


id: GO:0018411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein by amino acid glucuronidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein glucuronidation","synonyms":[{"name":"protein amino acid glucuronidation","type":"exact"}],"termid":"GO:0018411"}


id: PBO:0036453
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microvillus inclusion disease","termid":"PBO:0036453"}


id: FYECO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Adenine was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000065 absence of adenine (obsolete FYECO:0000065)","termid":"FYECO:0000065"}


id: FYPO:0004731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus-end of a cytoplasmic microtubule is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"normal protein localization to interphase microtubule","termid":"FYPO:0005842"},{"relation_name":"is_a","term_name":"normal protein localization to microtubule plus-end","termid":"FYPO:0007452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to interphase microtubule plus-end","secondary_identifiers":["FYPO:0005812"],"synonyms":[{"name":"normal protein localisation to cytoplasmic microtubule plus-end during mitotic interphase","type":"exact"},{"name":"normal protein localisation to interphase microtubule plus-end","type":"exact"},{"name":"normal protein localization to cytoplasmic microtubule plus end during mitotic interphase","type":"exact"},{"name":"normal protein localization to cytoplasmic microtubule plus-end during interphase during vegetative growth","type":"exact"},{"name":"normal protein localization to cytoplasmic microtubule plus-end during interphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to cytoplasmic microtubule plus-end during mitotic interphase","type":"exact"},{"name":"normal protein localization to interphase cytoplasmic microtubule plus-end","type":"exact"},{"name":"normal protein localization to interphase microtubule plus end","type":"exact"},{"name":"normal protein localization to interphase microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"normal protein localization to interphase microtubule plus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0004731"}


id: PBO:0043695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 1","termid":"PBO:0043695"}


id: PBO:0068619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 71, pseudogene","termid":"PBO:0068619"}


id: PBO:0048463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucokinase","termid":"PBO:0048463"}


id: FYECO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethylenediaminetetraacetic acid (EDTA) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ EDTA","synonyms":[{"name":"EDTA added","type":"exact"},{"name":"ethylenediaminetetraacetic acid added","type":"exact"}],"termid":"FYECO:0000176"}


id: PBO:0063657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 2","termid":"PBO:0063657"}


id: PBO:0076500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 1 receptor member 3","termid":"PBO:0076500"}


id: PBO:0080355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 10, pseudogene","termid":"PBO:0080355"}


id: SO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a peptide that is able to excise itself and rejoin the remaining portions with a peptide bond.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"intein","secondary_identifiers":["http://en.wikipedia.org/wiki/Intein"],"synonyms":[{"name":"protein intron","type":"related"}],"termid":"SO:0000728"}


id: GO:1901463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"regulation of tetrapyrrole anabolism","type":"exact"},{"name":"regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"regulation of tetrapyrrole formation","type":"exact"},{"name":"regulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901463"}


id: PATO:0001291
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality that inheres in an bearer by virtue of how that bearer interacts with electromagnetic radiation.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Electromagnetic_radiation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation quality","termid":"PATO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}


id: SO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of bacterial chromosome replication.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriC","synonyms":[{"name":"origin of bacterial chromosome replication","type":"exact"}],"termid":"SO:0000953"}


id: PBO:0059166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPV17 mitochondrial inner membrane protein like","termid":"PBO:0059166"}


id: PBO:0066808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 107","termid":"PBO:0066808"}


id: GO:0140920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thermomorphogenesis.","definition_xrefs":["PMID:27250752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"thermomorphogenesis","termid":"GO:0140919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thermomorphogenesis","termid":"GO:0140920"}


id: PBO:0041548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 32","termid":"PBO:0041548"}


id: PBO:0013438
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe FLocculin","termid":"PBO:0013438"}


id: PR:Q9P7D2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein phosphatase methylesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03467","PANTHER:PTHR14189:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase methylesterase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.17c","secondary_identifiers":["UniProtKB:Q9P7D2"],"synonyms":[{"name":"PME-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPME1","type":"exact"}],"termid":"PR:Q9P7D2"}


id: GO:0033235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the addition of SUMO groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein sumoylation","termid":"GO:0033233"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein sumoylation","termid":"GO:0016925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein sumoylation","synonyms":[{"name":"positive regulation of sumoylation","type":"exact"}],"termid":"GO:0033235"}


id: PBO:0038377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_treated_by_substance","termid":"PBO:0038377"}


id: GO:1990937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of one or more acetyl groups to a xylan molecule.","definition_xrefs":["PMID:26745802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"},{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"xylan acetylation","termid":"GO:1990937"}


id: PBO:0001644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase subunit Ost4 (predicted)","termid":"PBO:0001644"}


id: GO:0036225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of vitamin B1 (also called thiamin and thiamine).","definition_xrefs":["GOC:al","Wikipedia:Thiamine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B1 starvation","synonyms":[{"name":"cellular response to thiamin starvation","type":"exact"},{"name":"cellular response to vitamin B1 deprivation","type":"exact"}],"termid":"GO:0036225"}


id: GO:0031479
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class IX myosin heavy chain and associated light chains. Myosin IX is monomeric with a motor domain containing an N-terminal extension and an insert in the actin binding interface, followed by four to six IQ motifs and a tail region that contains a zinc binding motif and a domain with homology to GTPase activating proteins (GAPs) of the Rho family of G-proteins.","definition_xrefs":["PMID:29679756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"myosin IX complex","termid":"GO:0031479"}


id: PBO:0031042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_organization","termid":"PBO:0031042"}


id: PBO:0071833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 28","termid":"PBO:0071833"}


id: PBO:0038888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin 1","termid":"PBO:0038888"}


id: GO:0060235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens.","definition_xrefs":["ISBN:0878932437","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"part_of","term_name":"lens morphogenesis in camera-type eye","termid":"GO:0002089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens induction in camera-type eye","termid":"GO:0060235"}


id: PBO:0078925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 2-1","termid":"PBO:0078925"}


id: GO:0099089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of endoplasmic reticulum into a postsynaptic compartment such as a dendritic spine.","definition_xrefs":["GOC:dos","PMID:21151132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of ER localization","termid":"GO:0051686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of endoplasmic reticulum localization to postsynapse","synonyms":[{"name":"establishment of ER localization to postsynapse","type":"exact"}],"termid":"GO:0099089"}


id: PBO:0029492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_meiosis_II","termid":"PBO:0029492"}


id: PR:O74836
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L1-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.08c","synonyms":[{"name":"L10a (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl101","type":"exact"}],"termid":"PR:O74836"}


id: GO:0034657
data:
  {"annotated_genes":["SJAG_04309","SJAG_02197","SJAG_01637","SJAG_01472","SJAG_01678","SJAG_01886","SJAG_03385"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84330,91123,92672,93468,97961,104003,110418],"is_not":false,"summary":null,"term":"GO:0034657"}]},"cv_name":"cellular_component","definition":"A protein complex with ubiquitin ligase activity that, in Saccharomyces cerevisiae, is involved in proteasomal degradation of fructose-1,6-bisphosphatase (FBPase) and phosphoenolpyruvate carboxykinase during the transition from gluconeogenic to glycolytic growth conditions. It appears to play a broader role in cellular homeostasis and development in other species.","definition_xrefs":["PMID:35682545","PMID:12686616","PMID:18508925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01472":null,"SJAG_01637":null,"SJAG_01678":null,"SJAG_01886":null,"SJAG_02197":null,"SJAG_03385":null,"SJAG_04309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GID complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal to LisH complex","type":"exact"},{"name":"CTLH complex","type":"exact"}],"termid":"GO:0034657","terms_by_termid":{"GO:0034657":null}}


id: GO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a NK T cell population by cell division.","definition_xrefs":["PMID:10704459","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"},{"relation_name":"is_a","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell proliferation","synonyms":[{"name":"NK T lymphocyte proliferation","type":"exact"},{"name":"NK T-cell proliferation","type":"exact"},{"name":"NK T-lymphocyte proliferation","type":"exact"},{"name":"NKT cell proliferation","type":"exact"},{"name":"NT cell proliferation","type":"exact"},{"name":"natural T cell proliferation","type":"exact"},{"name":"natural killer T cell proliferation","type":"exact"}],"termid":"GO:0001866"}


id: GO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of complement activation by the lectin pathway.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation, lectin pathway","termid":"GO:0001868"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"negative regulation of complement activation","termid":"GO:0045916"},{"relation_name":"negatively_regulates","term_name":"complement activation, lectin pathway","termid":"GO:0001867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of complement activation, lectin pathway","synonyms":[{"name":"down regulation of complement activation, lectin pathway","type":"exact"},{"name":"down-regulation of complement activation, lectin pathway","type":"exact"},{"name":"downregulation of complement activation, lectin pathway","type":"exact"},{"name":"inhibition of complement activation, lectin pathway","type":"narrow"},{"name":"negative regulation of complement cascade, lectin pathway","type":"exact"}],"termid":"GO:0001869"}


id: PBO:0059536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site H","termid":"PBO:0059536"}


id: GO:0008685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-CDP-2-C-methyl-D-erythritol 2-phosphate = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + CMP.","definition_xrefs":["EC:4.6.1.12","RHEA:23864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity","secondary_identifiers":["MetaCyc:RXN0-302","KEGG_REACTION:R05637"],"synonyms":[{"name":"2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol CMP-lyase (cyclizing)","type":"related"},{"name":"2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol CMP-lyase (cyclizing; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate-forming)","type":"related"},{"name":"MECDP-synthase activity","type":"related"},{"name":"MECP synthase activity","type":"exact"}],"termid":"GO:0008685"}


id: PBO:0066250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMS3 antisense RNA 3","termid":"PBO:0066250"}


id: PBO:0064285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing O2","termid":"PBO:0064285"}


id: GO:1990535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a neuron projection in a stable functional or structural state. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["PMID:25359212","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection maintenance","synonyms":[{"name":"axon homeostasis","type":"related"},{"name":"axon maintenance","type":"related"},{"name":"neurite maintenance","type":"narrow"},{"name":"neuron process maintenance","type":"exact"},{"name":"neuron protrusion maintenance","type":"exact"},{"name":"neuronal cell projection maintenance","type":"exact"}],"termid":"GO:1990535"}


id: PBO:0088614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit Sno1","termid":"PBO:0088614"}


id: GO:0047472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(carboxymethyl)-5-oxo-2,5-dihydro-2-furoate = 3-carboxy-cis,cis-muconate + H+.","definition_xrefs":["PMID:15301541","PMID:17054713","RHEA:23656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"3-carboxy-cis,cis-muconate cycloisomerase activity","secondary_identifiers":["MetaCyc:5.5.1.2-RXN","GO:0018842","EC:5.5.1.2","KEGG_REACTION:R03307","UM-BBD_reactionID:r0582"],"synonyms":[{"name":"3-carboxymuconate cycloisomerase type II activity","type":"related"},{"name":"3-carboxymuconate lactonizing enzyme activity","type":"related"},{"name":"3-carboxymuconolactone hydrolase activity","type":"related"},{"name":"CMLE activity","type":"related"},{"name":"beta-carboxymuconate lactonizing enzyme activity","type":"related"}],"termid":"GO:0047472"}


id: PBO:0041910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBLL1 antisense RNA 1","termid":"PBO:0041910"}


id: PBO:0028730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_L-ergothioneine_level","termid":"PBO:0028730"}


id: GO:0045697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synergid cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"synergid differentiation","termid":"GO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synergid differentiation","synonyms":[{"name":"regulation of synergid cell differentiation","type":"exact"}],"termid":"GO:0045697"}


id: GO:0033930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-galactosidic linkages in keratan sulfate.","definition_xrefs":["EC:3.2.1.103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"keratan-sulfate endo-1,4-beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.103-RXN"],"synonyms":[{"name":"endo-beta-galactosidase activity","type":"broad"},{"name":"keratan sulfate endogalactosidase activity","type":"related"},{"name":"keratan-sulfate 1,4-beta-D-galactanohydrolase activity","type":"related"},{"name":"keratanase activity","type":"related"}],"termid":"GO:0033930"}


id: PBO:0003832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein (predicted)","termid":"PBO:0003832"}


id: PBO:0065326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 50","termid":"PBO:0065326"}


id: SO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The paternal copy of the gene is modified, rendering it transcriptionally silent.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_imprinted","termid":"SO:0000134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally_imprinted","synonyms":[{"name":"paternally imprinted","type":"exact"}],"termid":"SO:0000136"}


id: PBO:0056139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper tumor suppressor 1","termid":"PBO:0056139"}


id: FYPO:0002992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle begins earlier than normal, during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic G1/S phase transition","termid":"FYPO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"premature mitotic G1/S phase transition during cellular response to methyl methanesulfonate","synonyms":[{"name":"advanced mitotic G1/S phase transition during cellular response to methyl methanesulfonate","type":"exact"},{"name":"premature G1/S phase transition during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G1/S phase transition during cellular response to methyl methanesulfonate","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to MMS","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002992"}


id: GO:0047356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ribitol phosphate(n) + CDP-ribitol = ribitol phosphate(n+1) + CMP.","definition_xrefs":["EC:2.7.8.14","MetaCyc:2.7.8.14-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016780","GO:0016740"],"is_obsolete":false,"name":"CDP-ribitol ribitolphosphotransferase activity","secondary_identifiers":["RHEA:13353","MetaCyc:RXN-18380"],"synonyms":[{"name":"CDP-ribitol:poly(ribitol phosphate) ribitolphosphotransferase activity","type":"related"},{"name":"CDPribitol ribitolphosphotransferase activity","type":"related"},{"name":"poly(ribitol phosphate) synthetase activity","type":"related"},{"name":"polyribitol phosphate polymerase activity","type":"related"},{"name":"polyribitol phosphate synthetase activity","type":"related"},{"name":"teichoate synthase activity","type":"related"},{"name":"teichoate synthetase activity","type":"related"},{"name":"teichoic-acid synthase activity","type":"broad"}],"termid":"GO:0047356"}


id: PBO:0028521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_acetylation","termid":"PBO:0028521"}


id: GO:0047799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclopentanone + H+ + NADPH + O2 = 5-valerolactone + H2O + NADP+.","definition_xrefs":["RHEA:15737","EC:1.14.13.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cyclopentanone monooxygenase activity","secondary_identifiers":["MetaCyc:CYCLOPENTANONE-MONOOXYGENASE-RXN","KEGG_REACTION:R02554"],"synonyms":[{"name":"cyclopentanone 1,2-monooxygenase activity","type":"related"},{"name":"cyclopentanone oxygenase activity","type":"related"},{"name":"cyclopentanone,NADPH:oxygen oxidoreductase (5-hydroxylating, lactonizing)","type":"related"}],"termid":"GO:0047799"}


id: GO:1903292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a Golgi membrane.","definition_xrefs":["GO_REF:0000087","PMID:11378902","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to Golgi membrane","synonyms":[{"name":"protein localisation in Golgi membrane","type":"exact"},{"name":"protein localisation to Golgi membrane","type":"exact"},{"name":"protein localization in Golgi membrane","type":"exact"}],"termid":"GO:1903292"}


id: PBO:0050450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U pseudogene 1","termid":"PBO:0050450"}


id: PBO:0084522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs (Chs5p-Arf1p-binding proteins) family; part of the exomer complex with Chs5p to mediate export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane; BCH2 has a paralog, CHS6, that arose from the whole genome duplication","termid":"PBO:0084522"}


id: PBO:0030326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_wall_biogenesis","termid":"PBO:0030326"}


id: GO:0010821
data:
  {"annotated_genes":["SJAG_01212","SJAG_01458","SJAG_03887","SJAG_04203","SJAG_00855","SJAG_00304"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85846],"is_not":false,"summary":null,"term":"GO:0010821"},{"annotations":[99587,112486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[102574,98140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[105017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a mitochondrion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00304":null,"SJAG_00855":null,"SJAG_01212":null,"SJAG_01458":null,"SJAG_03887":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrion organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrion organisation","type":"exact"}],"termid":"GO:0010821","terms_by_termid":{"GO:0010637":null,"GO:0010821":null,"GO:0090141":null,"GO:0090258":null}}


id: PR:Q09890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC584.16c gene.","definition_xrefs":["UniProtKB:Q09890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C584.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.16c","synonyms":[{"name":"Spom972h-SPCC584.16c","type":"exact"}],"termid":"PR:Q09890"}


id: GO:0046607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the centrosome cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome cycle","termid":"GO:0046605"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of centrosome cycle","synonyms":[{"name":"activation of centrosome cycle","type":"narrow"},{"name":"stimulation of centrosome cycle","type":"narrow"},{"name":"up regulation of centrosome cycle","type":"exact"},{"name":"up-regulation of centrosome cycle","type":"exact"},{"name":"upregulation of centrosome cycle","type":"exact"}],"termid":"GO:0046607"}


id: PBO:0062384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 2 pseudogene","termid":"PBO:0062384"}


id: GO:0046090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleoside metabolic process","termid":"GO:0046122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyadenosine metabolic process","synonyms":[{"name":"deoxyadenosine metabolism","type":"exact"}],"termid":"GO:0046090"}


id: PBO:0043927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine O-octanoyltransferase","termid":"PBO:0043927"}


id: GO:0110027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA strand resection involved in replication fork processing.","definition_xrefs":["GOC:mah","PMID:28475874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA strand resection involved in replication fork processing","termid":"GO:0110026"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"DNA strand resection involved in replication fork processing","termid":"GO:0110025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA strand resection involved in replication fork processing","termid":"GO:0110027"}


id: GO:0008439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Increases the activity of the enzyme monophenol monooxygenase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monophenol monooxygenase activator activity (obsolete GO:0008439)","synonyms":[{"name":"monophenol monooxygenase activator activity","type":"exact"},{"name":"prophenol oxidase activator","type":"related"}],"termid":"GO:0008439"}


id: PATO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reproductive quality inhering in a bearer by virtue of the bearer's initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive quality","termid":"PATO:0001434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fertility","termid":"PATO:0000274"}


id: PBO:0050087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 7","termid":"PBO:0050087"}


id: PBO:0079544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 6","termid":"PBO:0079544"}


id: PBO:0070646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 17","termid":"PBO:0070646"}


id: GO:0044764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that is carried out at the cellular level which involves another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cellular process (obsolete GO:0044764)","termid":"GO:0044764"}


id: GO:0048180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta subunits, inhibin beta-A and inhibin beta-B (sometimes known as activin beta or activin/inhibin beta). There are three forms of activin complex, activin A, which is composed of 2 inhibin beta-A subunits, activin B, which is composed of 2 inhibin beta-B subunits, and activin AB, which is composed of an inhibin beta-A and an inhibin beta-B subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"activin complex","termid":"GO:0048180"}


id: GO:0062146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chloro-L-lysine + AH2 + O2 = A + formaldehyde + H2O + L-2-amino-4-chloropent-4-enoate + NH4(+).","definition_xrefs":["PMID:30867596","RHEA:59888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-chloro-allylglycine synthase activity","termid":"GO:0062146"}


id: PR:Q9P805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dcp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-decapping enzyme subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.21","synonyms":[{"name":"Spom972h-dcp1","type":"exact"}],"termid":"PR:Q9P805"}


id: GO:0008712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-D-glycero-D-manno-heptose = ADP-L-glycero-D-manno-heptose.","definition_xrefs":["RHEA:17577","EC:5.1.3.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"ADP-glyceromanno-heptose 6-epimerase activity","secondary_identifiers":["MetaCyc:5.1.3.20-RXN","KEGG_REACTION:R05176"],"synonyms":[{"name":"ADP-L-glycero-D-manno-heptose 6-epimerase activity","type":"related"},{"name":"ADPglyceromanno-heptose 6-epimerase activity","type":"related"}],"termid":"GO:0008712"}


id: FYPO:0004525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cellular membrane organization is abnormal during mating.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane organization","termid":"FYPO:0001013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal membrane organization during mating","synonyms":[{"name":"abnormal cellular membrane organization during mating","type":"exact"},{"name":"abnormal membrane organisation during mating","type":"exact"},{"name":"abnormal membrane organization during conjugation","type":"exact"},{"name":"abnormal membrane organization during conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0004525"}


id: GO:0110012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a P-body.","definition_xrefs":["GOC:mah","PMID:28031482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to P-body","synonyms":[{"name":"protein localisation to P-body","type":"exact"},{"name":"protein localization to P body","type":"exact"},{"name":"protein localization to cytoplasmic mRNA processing body","type":"exact"}],"termid":"GO:0110012"}


id: GO:0006651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diacylglycerol, a glyceride in which any two of the R groups (positions not specified) are acyl groups while the remaining R group can be either H or an alkyl group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diacylglycerol metabolic process","termid":"GO:0046339"},{"relation_name":"is_a","term_name":"acylglycerol biosynthetic process","termid":"GO:0046463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"diacylglycerol biosynthetic process","synonyms":[{"name":"diacylglycerol anabolism","type":"exact"},{"name":"diacylglycerol biosynthesis","type":"exact"},{"name":"diacylglycerol formation","type":"exact"},{"name":"diacylglycerol synthesis","type":"exact"},{"name":"diglyceride biosynthesis","type":"exact"}],"termid":"GO:0006651"}


id: GO:0005531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose binding lectin (obsolete GO:0005531)","synonyms":[{"name":"galactose binding lectin","type":"exact"}],"termid":"GO:0005531"}


id: PBO:0082382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta3-like subunit of the yeast AP-3 complex; functions in transport of alkaline phosphatase to the vacuole via the alternate pathway; exists in both cytosolic and peripherally associated membrane-bound pools","termid":"PBO:0082382"}


id: PBO:0056957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 19b-2","termid":"PBO:0056957"}


id: PATO:0002361
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tendency which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"},{"relation_name":"is_a","term_name":"tendency","termid":"PATO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased tendency","termid":"PATO:0002361"}


id: PBO:0042784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 128","termid":"PBO:0042784"}


id: PBO:0075041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-4","termid":"PBO:0075041"}


id: GO:0032169
data:
  {"annotated_genes":["SJAG_01769","SJAG_04470","SJAG_03688","SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90548,96203,102132,112145],"is_not":false,"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane at the site of cytokinesis in a prospore; composed of septins as well as septin-associated proteins.","definition_xrefs":["GOC:mah","PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01769":null,"SJAG_03688":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"prospore septin ring","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032169","terms_by_termid":{"GO:0032169":null}}


id: GO:0042973
data:
  {"annotated_genes":["SJAG_00667","SJAG_02192","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90070,91152,96239],"is_not":false,"summary":null,"term":"GO:0042973"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.","definition_xrefs":["EC:3.2.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_02192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"glucan endo-1,3-beta-D-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.39-RXN"],"synonyms":[{"name":"(1->3)-beta-glucan 3-glucanohydrolase activity","type":"related"},{"name":"(1->3)-beta-glucan endohydrolase activity","type":"related"},{"name":"1,3-beta-D-glucan 3-glucanohydrolase activity","type":"related"},{"name":"1,3-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"beta-1,3-glucanase","type":"broad"},{"name":"callase activity","type":"related"},{"name":"endo-(1,3)-beta-D-glucanase activity","type":"broad"},{"name":"endo-(1->3)-beta-D-glucanase activity","type":"broad"},{"name":"endo-1,3-beta-D-glucanase","type":"broad"},{"name":"endo-1,3-beta-glucanase activity","type":"broad"},{"name":"endo-1,3-beta-glucosidase activity","type":"broad"},{"name":"kitalase activity","type":"related"},{"name":"laminaranase activity","type":"broad"},{"name":"laminarinase activity","type":"broad"},{"name":"oligo-1,3-glucosidase activity","type":"related"}],"termid":"GO:0042973","terms_by_termid":{"GO:0042973":null}}


id: PBO:0005431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase (predicted)","termid":"PBO:0005431"}


id: PBO:0004345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HVA22/TB2/DP1 family protein","termid":"PBO:0004345"}


id: PBO:0043049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and histidine rich domain containing 2, pseudogene","termid":"PBO:0043049"}


id: PBO:0054304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1696","termid":"PBO:0054304"}


id: FYPO:0005365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore sliding, i.e. the movement of a kinetochore along spindle microtubules, during mitotic chromosome recapture does not occur.","definition_xrefs":["PMID:18256284","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000337","FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished kinetochore sliding during chromosome recapture","synonyms":[{"name":"abolished chromosome migration during chromosome recapture","type":"exact"},{"name":"abolished chromosome movement during chromosome recapture","type":"exact"},{"name":"abolished kinetochore migration during chromosome recapture","type":"exact"},{"name":"abolished kinetochore sliding along kinetochore microtubule towards spindle pole body during chromosome recapture","type":"exact"},{"name":"abolished kinetochore sliding during chromosome recapture during mitosis","type":"exact"},{"name":"abolished kinetochore sliding during chromosome recapture during vegetative growth","type":"exact"},{"name":"abolished kinetochore sliding during kinetochore retrieval","type":"exact"},{"name":"abolished kinetochore sliding during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"abolished kinetochore sliding during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"abolished kinetochore sliding during mitotic metaphase chromosome recapture","type":"exact"},{"name":"abolished kinetochore sliding during sister kinetochore recapture","type":"exact"},{"name":"abolished kinetochore sliding towards SPB during chromosome recapture","type":"exact"},{"name":"abolished kinetochore sliding towards spindle pole body during chromosome recapture","type":"exact"},{"name":"kinetochore sliding during chromosome recapture abolished","type":"exact"}],"termid":"FYPO:0005365"}


id: GO:0010941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell death (obsolete GO:0010941)","termid":"GO:0010941"}


id: PR:O74432
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Golgi to ER traffic protein 4 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi to ER traffic protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.12c","secondary_identifiers":["UniProtKB:O74432"],"synonyms":[{"name":"Spom972h-GET4","type":"exact"}],"termid":"PR:O74432"}


id: GO:0008716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 D-alanine + ATP = D-alanyl-D-alanine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.4","RHEA:11224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"D-alanine-D-alanine ligase activity","secondary_identifiers":["KEGG_REACTION:R01150","MetaCyc:DALADALALIG-RXN"],"synonyms":[{"name":"D-Ala-D-Ala synthetase activity","type":"related"},{"name":"D-alanine:D-alanine ligase (ADP-forming)","type":"related"},{"name":"D-alanyl-D-alanine synthetase activity","type":"related"},{"name":"D-alanylalanine synthetase activity","type":"related"},{"name":"alanine:alanine ligase (ADP-forming) activity","type":"related"},{"name":"alanylalanine synthetase activity","type":"related"}],"termid":"GO:0008716"}


id: PBO:0035725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K14_acetylation_during_vegetative_growth","termid":"PBO:0035725"}


id: GO:0035136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb morphogenesis","termid":"GO:0035108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forelimb morphogenesis","secondary_identifiers":["GO:0035140"],"synonyms":[{"name":"arm morphogenesis","type":"narrow"}],"termid":"GO:0035136"}


id: PBO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide B","termid":"PBO:0061295"}


id: PBO:0065995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAI14 divergent transcript","termid":"PBO:0065995"}


id: FYPO:0005252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tamoxifen. Cells stop growing (and may die) at a concentration of tamoxifen that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to tamoxifen","synonyms":[{"name":"hypersensitive to tamoxifen","type":"exact"},{"name":"sensitive to tamoxifen during mitotic cell cycle","type":"related"},{"name":"sensitive to tamoxifen during vegetative growth","type":"exact"}],"termid":"FYPO:0005252"}


id: PBO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex subunit Snt1","termid":"PBO:0002821"}


id: PBO:0005216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf10","termid":"PBO:0005216"}


id: GO:2000815
data:
  {"annotated_genes":["SJAG_02573","SJAG_05014","SJAG_03886"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85833,86225,87547],"is_not":false,"summary":null,"term":"GO:2000815"}]},"cv_name":"biological_process","definition":"A process of regulation of mRNA stability that is involved in a response to oxidative stress.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability involved in response to stress","termid":"GO:0010610"},{"relation_name":"part_of","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02573":null,"SJAG_03886":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA stability involved in response to oxidative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000815","terms_by_termid":{"GO:2000815":null}}


id: GO:1903239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of positive regulation of the force of heart contraction by chemical signal.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:17242280"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of positive regulation of the force of heart contraction by chemical signal (obsolete GO:1903239)","synonyms":[{"name":"regulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"regulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"}],"termid":"GO:1903239"}


id: PBO:0078950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 2-1","termid":"PBO:0078950"}


id: PBO:0051943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine triphosphatase","termid":"PBO:0051943"}


id: PBO:0045935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor like GTPase 1 pseudogene 2","termid":"PBO:0045935"}


id: PATO:0001358
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having a knob or knoblike protuberance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"umbonate","termid":"PATO:0001358"}


id: GO:1990318
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XIX) chains; type XIX collagen triple helices localize to basement membrane zones in differentiating muscle cells.","definition_xrefs":["PMID:17876790","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"},{"relation_name":"is_a","term_name":"basement membrane collagen trimer","termid":"GO:0098651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XIX trimer","termid":"GO:1990318"}


id: PBO:0049378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 2","termid":"PBO:0049378"}


id: FYPO:0003086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal chromatin binding","termid":"FYPO:0003086"}


id: FYPO:0006669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one cell mates with two partners, leading to the fusion of three cells. The resulting zygote can then undergo sporulation to form an ascus containing more than four spores.","definition_xrefs":["PomBase:mah","PMID:30089908"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal sporulation resulting in formation of ascus with more than four spores","termid":"FYPO:0003263"},{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000301"],"is_obsolete":false,"name":"abnormal mating between three cells","synonyms":[{"name":"abnormal conjugation between three cells","type":"exact"},{"name":"abnormal mating among three cells","type":"exact"}],"termid":"FYPO:0006669"}


id: PBO:0027683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad54_foci_during_cellular_response_to_doxorubicin","termid":"PBO:0027683"}


id: PBO:0059571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1 pseudogene 3","termid":"PBO:0059571"}


id: FYECO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cisplatin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cisplatin","termid":"FYECO:0000091"}


id: GO:0046710
data:
  {"annotated_genes":["SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63693],"is_not":false,"summary":null,"term":"GO:0046710"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GDP metabolic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"GDP metabolism","type":"exact"}],"termid":"GO:0046710","terms_by_termid":{"GO:0046710":null}}


id: GO:0097400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-17 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ic","PMID:21602493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-17","termid":"GO:0097398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-17-mediated signaling pathway","synonyms":[{"name":"IL-17-mediated signaling pathway","type":"exact"},{"name":"IL-17-mediated signalling pathway","type":"exact"},{"name":"interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:0097400"}


id: PBO:0051948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-trisphosphate 3-kinase B","termid":"PBO:0051948"}


id: PBO:0070614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 82","termid":"PBO:0070614"}


id: PBO:0039788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen receptor","termid":"PBO:0039788"}


id: PBO:0030364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_oxygen","termid":"PBO:0030364"}


id: PR:Q9P4W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps403 gene.","definition_xrefs":["UniProtKB:Q9P4W9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.07","synonyms":[{"name":"Spom972h-rps403","type":"exact"}],"termid":"PR:Q9P4W9"}


id: PBO:0075903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4","termid":"PBO:0075903"}


id: PBO:0089810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Caj1/Djp1 type","termid":"PBO:0089810"}


id: PBO:0111895
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atf-CREB subfamily","termid":"PBO:0111895"}


id: PBO:0029142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_torin1","termid":"PBO:0029142"}


id: GO:0062082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class Ib molecule of the HLA-A subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["DOI:10.1002/9780470015902.a0024246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class Ib receptor activity","termid":"GO:0062080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"HLA-E specific inhibitory MHC class Ib receptor activity","termid":"GO:0062082"}


id: GO:0016520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with growth hormone-releasing hormone to initiate a change in cell activity.","definition_xrefs":["PMID:12529933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"growth hormone-releasing hormone receptor activity","termid":"GO:0016520"}


id: PBO:0089906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase, KAT5 family Mst1","termid":"PBO:0089906"}


id: GO:0009374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"biotin binding","synonyms":[{"name":"vitamin B7 binding","type":"exact"},{"name":"vitamin H binding","type":"exact"}],"termid":"GO:0009374"}


id: GO:1903268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ornithine catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:bhm","GOC:TermGenie","PMID:12679340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of ornithine catabolic process","termid":"GO:1903266"},{"relation_name":"positively_regulates","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"positive regulation of ornithine catabolic process","synonyms":[{"name":"activation of ornithine breakdown","type":"narrow"},{"name":"activation of ornithine catabolic process","type":"narrow"},{"name":"activation of ornithine catabolism","type":"narrow"},{"name":"activation of ornithine degradation","type":"narrow"},{"name":"positive regulation of ornithine breakdown","type":"exact"},{"name":"positive regulation of ornithine catabolism","type":"exact"},{"name":"positive regulation of ornithine degradation","type":"exact"},{"name":"up regulation of ornithine breakdown","type":"exact"},{"name":"up regulation of ornithine catabolic process","type":"exact"},{"name":"up regulation of ornithine catabolism","type":"exact"},{"name":"up regulation of ornithine degradation","type":"exact"},{"name":"up-regulation of ornithine breakdown","type":"exact"},{"name":"up-regulation of ornithine catabolic process","type":"exact"},{"name":"up-regulation of ornithine catabolism","type":"exact"},{"name":"up-regulation of ornithine degradation","type":"exact"},{"name":"upregulation of ornithine breakdown","type":"exact"},{"name":"upregulation of ornithine catabolic process","type":"exact"},{"name":"upregulation of ornithine catabolism","type":"exact"},{"name":"upregulation of ornithine degradation","type":"exact"}],"termid":"GO:1903268"}


id: PBO:0067110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 152, pseudogene","termid":"PBO:0067110"}


id: PBO:0041349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 85","termid":"PBO:0041349"}


id: GO:0097251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"leukotriene B4 metabolic process","termid":"GO:0036102"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"leukotriene B4 biosynthetic process","synonyms":[{"name":"LTB4 anabolism","type":"exact"},{"name":"LTB4 biosynthesis","type":"exact"},{"name":"LTB4 formation","type":"exact"},{"name":"LTB4 synthesis","type":"exact"},{"name":"leukotriene B4 anabolism","type":"exact"},{"name":"leukotriene B4 biosynthesis","type":"exact"},{"name":"leukotriene B4 formation","type":"exact"},{"name":"leukotriene B4 synthesis","type":"exact"}],"termid":"GO:0097251"}


id: GO:0032710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-26 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-26 production","termid":"GO:0032670"},{"relation_name":"negatively_regulates","term_name":"interleukin-26 production","termid":"GO:0032630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-26 production","secondary_identifiers":["GO:0045534"],"synonyms":[{"name":"down regulation of interleukin-26 production","type":"exact"},{"name":"down-regulation of interleukin-26 production","type":"exact"},{"name":"downregulation of interleukin-26 production","type":"exact"},{"name":"inhibition of interleukin-26 production","type":"narrow"},{"name":"negative regulation of IL-26 production","type":"exact"},{"name":"negative regulation of interleukin-26 biosynthetic process","type":"narrow"}],"termid":"GO:0032710"}


id: GO:0072399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of cytokinesis checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cytokinesis checkpoint signaling","secondary_identifiers":["GO:0072420"],"synonyms":[{"name":"cytokinesis checkpoint effector process","type":"exact"},{"name":"response to signal involved in cytokinesis checkpoint","type":"exact"}],"termid":"GO:0072399"}


id: PBO:0068399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 216 pseudogene 1","termid":"PBO:0068399"}


id: PBO:0026832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_at_mating_type_region","termid":"PBO:0026832"}


id: GO:1903198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-dopa decarboxylase activity.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of L-dopa decarboxylase activity","synonyms":[{"name":"regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"regulation of DDC activity","type":"exact"},{"name":"regulation of DOPA decarboxylase activity","type":"exact"}],"termid":"GO:1903198"}


id: GO:0010995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which free ubiquitin chains, compounds composed of a large number of ubiquitin monomers, are broken down.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"},{"relation_name":"part_of","term_name":"ubiquitin recycling","termid":"GO:0010992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"free ubiquitin chain depolymerization","termid":"GO:0010995"}


id: PBO:0056594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase 1","termid":"PBO:0056594"}


id: GO:1900266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of substance P receptor binding.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of receptor binding","termid":"GO:1900121"},{"relation_name":"is_a","term_name":"regulation of substance P receptor binding","termid":"GO:1900265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of substance P receptor binding","synonyms":[{"name":"down regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"down regulation of substance P receptor binding","type":"exact"},{"name":"down regulation of substance P receptor ligand","type":"narrow"},{"name":"down-regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"down-regulation of substance P receptor binding","type":"exact"},{"name":"down-regulation of substance P receptor ligand","type":"narrow"},{"name":"downregulation of neurokinin-1 receptor binding","type":"exact"},{"name":"downregulation of substance P receptor binding","type":"exact"},{"name":"downregulation of substance P receptor ligand","type":"narrow"},{"name":"inhibition of neurokinin-1 receptor binding","type":"exact"},{"name":"inhibition of substance P receptor binding","type":"narrow"},{"name":"inhibition of substance P receptor ligand","type":"narrow"},{"name":"negative regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"negative regulation of substance P receptor ligand","type":"narrow"}],"termid":"GO:1900266"}


id: PR:Q07538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase PRP4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR24056:SF17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase prp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.14","secondary_identifiers":["UniProtKB:Q07538"],"synonyms":[{"name":"SPCC777.14","type":"related"},{"name":"Spom972h-PRPF4B","type":"exact"}],"termid":"PR:Q07538"}


id: GO:0000263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Subunit of a heterotrimeric G-protein GTPase that contains the guanine nucleotide binding site and possesses GTPase activity.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete heterotrimeric G-protein GTPase, alpha-subunit (obsolete GO:0000263)","synonyms":[{"name":"heterotrimeric G-protein GTPase, alpha-subunit","type":"exact"}],"termid":"GO:0000263"}


id: GO:1900834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"emericellin biosynthetic process","termid":"GO:1900766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of emericellin biosynthetic process","synonyms":[{"name":"regulation of Variecoxanthone B anabolism","type":"related"},{"name":"regulation of Variecoxanthone B biosynthesis","type":"related"},{"name":"regulation of Variecoxanthone B biosynthetic process","type":"related"},{"name":"regulation of Variecoxanthone B formation","type":"related"},{"name":"regulation of Variecoxanthone B synthesis","type":"related"},{"name":"regulation of emericellin anabolism","type":"exact"},{"name":"regulation of emericellin biosynthesis","type":"exact"},{"name":"regulation of emericellin formation","type":"exact"},{"name":"regulation of emericellin synthesis","type":"exact"}],"termid":"GO:1900834"}


id: GO:0045445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into striated muscle fibers.","definition_xrefs":["GOC:go_curators","GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast differentiation","synonyms":[{"name":"myoblast cell differentiation","type":"exact"}],"termid":"GO:0045445"}


id: PBO:0057108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 198","termid":"PBO:0057108"}


id: PBO:0055669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA in non-homologous end joining pathway 1","termid":"PBO:0055669"}


id: PBO:0067068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 96, pseudogene","termid":"PBO:0067068"}


id: PR:O43063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11599:SF4","OMA:SCHPO03572","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.10c","secondary_identifiers":["UniProtKB:O43063"],"synonyms":[{"name":"Spom972h-PSMB6","type":"exact"}],"termid":"PR:O43063"}


id: PBO:0054470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1870","termid":"PBO:0054470"}


id: FYPO:0005285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cysteine-type endopeptidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased peptidase activity","termid":"FYPO:0000668"},{"relation_name":"is_a","term_name":"abnormal cysteine-type peptidase activity","termid":"FYPO:0004128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased cysteine-type endopeptidase activity","synonyms":[{"name":"decreased caspase activity","type":"narrow"},{"name":"reduced cysteine-type endopeptidase activity","type":"exact"}],"termid":"FYPO:0005285"}


id: GO:0032690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 alpha production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 alpha production","termid":"GO:0032650"},{"relation_name":"is_a","term_name":"negative regulation of interleukin-1 production","termid":"GO:0032692"},{"relation_name":"negatively_regulates","term_name":"interleukin-1 alpha production","termid":"GO:0032610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-1 alpha production","secondary_identifiers":["GO:0050712","GO:0050723"],"synonyms":[{"name":"down regulation of interleukin-1 alpha production","type":"exact"},{"name":"down-regulation of interleukin-1 alpha production","type":"exact"},{"name":"downregulation of interleukin-1 alpha production","type":"exact"},{"name":"inhibition of interleukin-1 alpha production","type":"narrow"},{"name":"negative regulation of IL-1 alpha production","type":"exact"},{"name":"negative regulation of interleukin-1 alpha biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-1 alpha secretion","type":"narrow"}],"termid":"GO:0032690"}


id: FYECO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A culture in which strains of different genetic backgrounds are grown together in one culture.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"competitive culture","termid":"FYECO:0000275"}


id: PBO:0081813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 6, Y-linked","termid":"PBO:0081813"}


id: GO:0008650
data:
  {"annotated_genes":["SJAG_03332","SJAG_00722","SJAG_03773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85663,97439,104523],"is_not":false,"summary":null,"term":"GO:0008650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing 2'-O-methyluridine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (uridine) methyltransferase activity","termid":"GO:0016436"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_03332":null,"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0140098","GO:0016741"],"is_obsolete":false,"name":"rRNA (uridine-2'-O-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:58956","Reactome:R-HSA-6793127"],"termid":"GO:0008650","terms_by_termid":{"GO:0008650":null}}


id: GO:0006727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ommochromes, any of a large group of natural polycyclic pigments commonly found in the Arthropoda, particularly in the ommatidia of the compound eye.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment biosynthetic process","termid":"GO:0006726"},{"relation_name":"is_a","term_name":"ocellus pigment biosynthetic process","termid":"GO:0008055"},{"relation_name":"is_a","term_name":"ommochrome metabolic process","termid":"GO:0046152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ommochrome biosynthetic process","synonyms":[{"name":"ommochrome anabolism","type":"exact"},{"name":"ommochrome biosynthesis","type":"exact"},{"name":"ommochrome formation","type":"exact"},{"name":"ommochrome synthesis","type":"exact"}],"termid":"GO:0006727"}


id: FYPO:0002144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein threonine phosphorylation at Thr-Pro site during vegetative growth (obsolete FYPO:0002144)","synonyms":[{"name":"increased protein threonine phosphorylation at TP site during vegetative growth","type":"exact"},{"name":"increased protein threonine phosphorylation at Thr-Pro site during mitotic cell cycle","type":"related"},{"name":"increased protein threonine phosphorylation at threonine-proline site during vegetative growth","type":"exact"}],"termid":"FYPO:0002144"}


id: PBO:0035706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoplasmic_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035706"}


id: PBO:0009641
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.-.-","termid":"PBO:0009641"}


id: PBO:0075960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 3","termid":"PBO:0075960"}


id: PBO:0040382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6AP1 divergent transcript","termid":"PBO:0040382"}


id: PBO:0071285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 8","termid":"PBO:0071285"}


id: PBO:0051858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 4","termid":"PBO:0051858"}


id: PBO:0068008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 310","termid":"PBO:0068008"}


id: PBO:0076096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 2","termid":"PBO:0076096"}


id: PBO:0079377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 12","termid":"PBO:0079377"}


id: PBO:0065813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3A interacting protein like 1","termid":"PBO:0065813"}


id: GO:0043164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall of the type found in Gram-negative bacteria. The cell wall is the rigid or semi-rigid envelope lying outside the cell membrane.","definition_xrefs":["GOC:jl","ISBN:0815108893","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan-based cell wall biogenesis","termid":"GO:0009273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell wall biogenesis","synonyms":[{"name":"1-2nm peptidoglycan-based cell wall biogenesis","type":"exact"},{"name":"cell wall anabolism","type":"broad"},{"name":"cell wall assembly","type":"broad"},{"name":"cell wall biosynthetic process","type":"broad"},{"name":"cell wall formation","type":"broad"},{"name":"cell wall synthesis","type":"broad"}],"termid":"GO:0043164"}


id: PATO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to shed body parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deciduous (generic)","termid":"PATO:0001730"}


id: PBO:0027218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytosolic_half-mer_polysome_level","termid":"PBO:0027218"}


id: MOD:01827
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-130 reporter+balance group.","definition_xrefs":["PubMed:18688235","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysTMT6plex-130 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01827"}


id: PBO:0111883
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT2 subfamily","termid":"PBO:0111883"}


id: PBO:0002870
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.21","termid":"PBO:0002870"}


id: GO:0102903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = gamma-terpinene + diphosphoric acid.","definition_xrefs":["RHEA:32559","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"gamma-terpinene synthase activity","secondary_identifiers":["EC:4.2.3.114","MetaCyc:RXN-8547"],"termid":"GO:0102903"}


id: SO:0001526
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where the final nucleotide assignment is different from that given by the base caller due to an improvement that replaces a mistake.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"base_call_error_correction","synonyms":[{"name":"base call error correction","type":"related"}],"termid":"SO:0001526"}


id: PBO:0068199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 506","termid":"PBO:0068199"}


id: PR:C6Y4D0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04411","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor C16C4.22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.22","secondary_identifiers":["UniProtKB:C6Y4D0"],"synonyms":[{"name":"Spom972h-POLE4","type":"exact"}],"termid":"PR:C6Y4D0"}


id: PBO:0038679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 5","termid":"PBO:0038679"}


id: PBO:0005587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase subunit Naa50 (predicted)","termid":"PBO:0005587"}


id: PBO:0090922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex beta subunit Tfg2","termid":"PBO:0090922"}


id: FYPO:0002555
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115588,115580,115592,115581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex","termid":"FYPO:0001371"},{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abolished protein localization to medial cortex during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial ring during vegetative growth","type":"exact"},{"name":"protein localization to medial cortex abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002555","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: PR:P87170
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptp4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP-dependent diacylglycerol kinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.05","synonyms":[{"name":"DAG kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ptp4","type":"exact"},{"name":"diglyceride kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87170"}


id: GO:1903574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a cellular response to amino acid starvation.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:11381086","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to amino acid starvation","termid":"GO:1903832"},{"relation_name":"negatively_regulates","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to amino acid starvation","synonyms":[{"name":"down regulation of cellular response to amino acid starvation","type":"exact"},{"name":"down-regulation of cellular response to amino acid starvation","type":"exact"},{"name":"downregulation of cellular response to amino acid starvation","type":"exact"},{"name":"inhibition of cellular response to amino acid starvation","type":"narrow"}],"termid":"GO:1903574"}


id: PBO:0041957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle and apoptosis regulator 1","termid":"PBO:0041957"}


id: PBO:0075341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase 2, pseudogene","termid":"PBO:0075341"}


id: PBO:0049961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 7","termid":"PBO:0049961"}


id: PBO:0067222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 291, pseudogene","termid":"PBO:0067222"}


id: GO:0033306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytol, (2E,7R,11R)-3,7,11,15-tetramethylhexadec-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"fatty alcohol metabolic process","termid":"GO:1903173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phytol metabolic process","synonyms":[{"name":"phytol metabolism","type":"exact"}],"termid":"GO:0033306"}


id: GO:0045458
data:
  {"annotated_genes":["SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100547],"is_not":false,"summary":null,"term":"GO:0045458"}]},"cv_name":"biological_process","definition":"Genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"},{"relation_name":"is_a","term_name":"maintenance of rDNA","termid":"GO:0043007"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"recombination within rDNA repeats","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"recombination within ribosomal DNA repeats","type":"exact"}],"termid":"GO:0045458","terms_by_termid":{"GO:0045458":null}}


id: GO:1902925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(hydroxyalkanoate) from fatty acid.","definition_xrefs":["PMID:21129764","GO_REF:0000092","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) biosynthetic process","termid":"GO:1901441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) biosynthetic process from fatty acid","synonyms":[{"name":"poly(hydroxyalkanoate) anabolism from fatty acid","type":"exact"},{"name":"poly(hydroxyalkanoate) biosynthesis from fatty acid","type":"exact"},{"name":"poly(hydroxyalkanoate) formation from fatty acid","type":"exact"},{"name":"poly(hydroxyalkanoate) synthesis from fatty acid","type":"exact"}],"termid":"GO:1902925"}


id: FYPO:0002524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NADPH-hemoprotein reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal NADPH-hemoprotein reductase activity","termid":"FYPO:0002523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased NADPH-hemoprotein reductase activity","termid":"FYPO:0002524"}


id: PBO:0086383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase of the DEAD-box protein family; constituent of 66S pre-ribosomal particles; essential protein involved in ribosome biogenesis","termid":"PBO:0086383"}


id: PBO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutS protein homolog 3","termid":"PBO:0001774"}


id: GO:1990880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of copper ions in a cell. These include transport of copper cations away from sensitive areas and to compartments or complexes whose purpose is sequestration.","definition_xrefs":["PMID:10369673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of copper ion","termid":"GO:0010273"},{"relation_name":"is_a","term_name":"cellular detoxification of metal ion","termid":"GO:0140961"},{"relation_name":"part_of","term_name":"cellular response to copper ion","termid":"GO:0071280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular detoxification of copper ion","termid":"GO:1990880"}


id: PBO:0047586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3 pseudogene 6","termid":"PBO:0047586"}


id: PBO:0089068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L57","termid":"PBO:0089068"}


id: GO:0015782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of CMP-N-acetylneuraminate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate transmembrane transport","synonyms":[{"name":"CMP-N-acetylneuraminate transport","type":"related"},{"name":"CMP-sialic acid transport","type":"broad"}],"termid":"GO:0015782"}


id: PBO:0079132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSKU antisense RNA 1","termid":"PBO:0079132"}


id: GO:0000943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of the retrotransposon RNA genome, reverse transcriptase, integrase, and associated molecules required for reproduction and integration of the retrotransposon into the host genome; the main structural molecule of the nucleocapsid is often a gag protein homolog.","definition_xrefs":["GOC:clt","PMID:10861903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"retrotransposon nucleocapsid","secondary_identifiers":["Wikipedia:Virus-like_particle"],"synonyms":[{"name":"VLP","type":"exact"},{"name":"Virus-like particle","type":"exact"}],"termid":"GO:0000943"}


id: PATO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer exhibiting deterioration of its structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degeneration","termid":"PATO:0002037"}


id: FYPO:0000431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which fermentation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal fermentation","termid":"FYPO:0000430"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished fermentation","synonyms":[{"name":"abolished fermentation during mitotic cell cycle","type":"related"},{"name":"absent fermentative metabolism","type":"exact"},{"name":"fermentation abolished","type":"exact"},{"name":"fermentation abolished during vegetative growth","type":"exact"},{"name":"fermentative metabolism abolished","type":"exact"},{"name":"fermentative metabolism: absent","type":"related"}],"termid":"FYPO:0000431"}


id: FYPO:0004047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains two nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"fragmented septum","termid":"FYPO:0004042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"binucleate vegetative cell with fragmented septum","synonyms":[{"name":"binucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"binucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004047"}


id: GO:0071326
data:
  {"annotated_genes":["SJAG_00574","SJAG_04312","SJAG_00472","SJAG_01254","SJAG_03081","SJAG_01699","SJAG_04026","SJAG_02444","SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112744,102970,102025,105659,97940,102615,105154,111703,90273],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosaccharide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"},{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to monosaccharide stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071326","terms_by_termid":{"GO:0010619":null}}


id: GO:0001186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of binding to an RNA polymerase I (RNAP I) transcription regulator and recruiting it to the general transcription machinery complex in order to modulate transcription initiation.","definition_xrefs":["GOC:txnOH-2018","PMID:12381659","PMID:14969726","PMID:8057832"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase I transcription regulator recruiting activity (obsolete GO:0001186)","synonyms":[{"name":"RNA polymerase I transcription factor recruiting activity","type":"exact"},{"name":"RNA polymerase I transcription factor recruiting transcription factor activity","type":"exact"},{"name":"transcription factor activity, RNA polymerase I transcription factor recruiting","type":"related"}],"termid":"GO:0001186"}


id: PR:000037078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that includes at least one sumoylated lysine.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sumoylated protein","synonyms":[{"name":"Prot/SumoLys+","type":"exact"}],"termid":"PR:000037078"}


id: GO:0002128
data:
  {"annotated_genes":["SJAG_02352","SJAG_04649","SJAG_01269"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110992],"is_not":false,"summary":null,"term":"GO:0002128"},{"annotations":[99001,93923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The process that results in the modification of the sugar of a nucleoside in tRNA at the 2'O position.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_02352":null,"SJAG_04649":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA nucleoside ribose methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002128","terms_by_termid":{"GO:0002128":null,"GO:0002130":null}}


id: GO:0033793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 2',4,4',6'-tetrahydroxychalcone 4'-O-beta-D-glucoside + H+ + O2 = aureusidin 6-O-beta-glucoside + H2O, 2 2',3,4,4',6'-pentahydroxychalcone 4'-O-beta-D-glucoside + 2 H+ + O2 = 2 aureusidin 6-O-beta-glucoside + 2 H2O, and 2',3,4,4',6'-pentahydroxychalcone 4'-O-beta-D-glucoside + H+ + O2 = bracteatin 6-O-beta-glucoside + H2O. This activity consists of two separate chemical transformations: 3-hydroxylation and oxidative cyclization (2',-dehydrogenation).","definition_xrefs":["EC:1.21.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aureusidin synthase activity","synonyms":[{"name":"2',4,4',6'-tetrahydroxychalcone:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0033793"}


id: GO:0012506
data:
  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lipid bilayer surrounding any membrane-bounded vesicle in the cell.","definition_xrefs":["GOC:vesicle","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle 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id: GO:0047322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [3-hydroxy-3-methylglutaryl-CoA reductase (NADPH)] + ATP = [3-hydroxy-3-methylglutaryl-CoA reductase (NADPH)] phosphate + ADP.","definition_xrefs":["EC:2.7.11.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0004672","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity","secondary_identifiers":["MetaCyc:2.7.1.109-RXN"],"synonyms":[{"name":"3-hydroxy-3-methylglutaryl coenzyme A reductase kinase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA reductase kinase activity","type":"related"},{"name":"AMPK","type":"related"},{"name":"ATP:hydroxymethylglutaryl-CoA reductase (NADPH) phosphotransferase activity","type":"related"},{"name":"HMG-CoA reductase kinase activity","type":"related"},{"name":"STK29","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl-CoA reductase kinase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A reductase kinase (phosphorylating) activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A reductase kinase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH) kinase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH2) kinase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase kinase activity","type":"related"},{"name":"reductase kinase activity","type":"broad"}],"termid":"GO:0047322"}


id: _global:regulates_characteristic
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a process and a characteristic in which process (P) regulates characteristic (C) iff: P results in the existence of C OR affects the intensity or magnitude of C.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_characteristic","secondary_identifiers":["RO:0019000"],"termid":"_global:regulates_characteristic"}


id: PBO:0044196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin E","termid":"PBO:0044196"}


id: GO:0045306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the establishment of competence for transformation.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibitor of the establishment of competence for transformation activity (obsolete GO:0045306)","synonyms":[{"name":"inhibitor of the establishment of competence for transformation activity","type":"exact"}],"termid":"GO:0045306"}


id: PBO:0059491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1","termid":"PBO:0059491"}


id: GO:0047324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerone + phosphoenolpyruvate = glycerone phosphate + pyruvate.","definition_xrefs":["EC:2.7.1.121","RHEA:18381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"phosphoenolpyruvate-glycerone phosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.1.121-RXN","KEGG_REACTION:R01012"],"synonyms":[{"name":"phosphoenolpyruvate:glycerone phosphotransferase activity","type":"related"}],"termid":"GO:0047324"}


id: GO:0038110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-2 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-2","termid":"GO:0071352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-2-mediated signaling pathway","synonyms":[{"name":"IL-2-mediated signaling pathway","type":"exact"},{"name":"interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:0038110"}


id: PBO:0045191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 4","termid":"PBO:0045191"}


id: PBO:0063639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 5, pseudogene","termid":"PBO:0063639"}


id: GO:0060420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organ growth","termid":"GO:0046620"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"heart growth","termid":"GO:0060419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart growth","termid":"GO:0060420"}


id: PBO:0038819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 22","termid":"PBO:0038819"}


id: FYPO:0002728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and in which the nucleus is larger than normal, when the cell is in a culture entering stationary phase. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PMID:2743431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen elongated cell with enlarged nucleus","termid":"FYPO:0002083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000032","FYPO:0000631","FYPO:0001985","FYPO:0000005","FYPO:0005447","FYPO:0000002","FYPO:0002403","FYPO:0001320"],"is_obsolete":false,"name":"inviable swollen elongated cell with enlarged nucleus upon entry into stationary phase","synonyms":[{"name":"lethal; swollen elongated cell with enlarged nucleus upon entry into stationary phase","type":"exact"}],"termid":"FYPO:0002728"}


id: GO:0047740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (7R)-7-(5-carboxylato-5-oxopentanamido)deacetylcephalosporanate + D-glutamate = 2-oxoglutarate + cephalosporin C.","definition_xrefs":["EC:2.6.1.74","RHEA:14553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"cephalosporin-C transaminase activity","secondary_identifiers":["KEGG_REACTION:R03063","MetaCyc:CEPHALOSPORIN-C-TRANSAMINASE-RXN"],"synonyms":[{"name":"L-alanine:cephalosporin-C aminotransferase activity","type":"related"},{"name":"cephalosporin C aminotransferase activity","type":"related"},{"name":"cephalosporin-C:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0047740"}


id: PBO:0056112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA2 pseudogene 3","termid":"PBO:0056112"}


id: GO:0120186
data:
  {"annotated_genes":["SJAG_01825","SJAG_01716","SJAG_05978","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87763,111510,102478,102381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to chromatin.","definition_xrefs":["PMID:29899453","PMID:20889714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to chromatin","termid":"GO:1905634"},{"relation_name":"negatively_regulates","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to chromatin","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of protein localisation to chromatin","type":"exact"}],"termid":"GO:0120186","terms_by_termid":{"GO:1905412":null}}


id: GO:0043874
data:
  {"annotated_genes":["SJAG_01404"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95103],"is_not":false,"summary":null,"term":"GO:0043874"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions:5-methylsulfanyl-2,3-dioxopentyl phosphate + H2O = 1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one + phosphate.","definition_xrefs":["RHEA:21700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"acireductone synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.3.77-RXN","Reactome:R-HSA-1237129","EC:3.1.3.77"],"synonyms":[{"name":"5-(methylthio)-2,3-dioxopentyl-phosphate phosphohydrolase (isomerizing)","type":"related"},{"name":"E-1","type":"related"},{"name":"E-1 enolase-phosphatase","type":"broad"}],"termid":"GO:0043874","terms_by_termid":{"GO:0043874":null}}


id: GO:0051741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyl-6-phytyl-1,4-benzoquinone + S-adenosyl-methionine = 2,3-dimethyl-6-phytyl-1,4-benzoquinone + S-adenosyl-homocysteine.","definition_xrefs":["MetaCyc:RXN-2542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity","secondary_identifiers":["RHEA:37979"],"synonyms":[{"name":"MPBQ methyltransferase activity","type":"exact"}],"termid":"GO:0051741"}


id: PBO:0061467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding factor 2 pseudogene 2","termid":"PBO:0061467"}


id: PBO:0040789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional apoptosis regulator","termid":"PBO:0040789"}


id: PR:Q9P779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1711.11 gene.","definition_xrefs":["UniProtKB:Q9P779","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin C1711.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.11","synonyms":[{"name":"Spom972h-SPBC1711.11","type":"exact"}],"termid":"PR:Q9P779"}


id: PBO:0030383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_vegetative_cell_population_growth","termid":"PBO:0030383"}


id: GO:0120191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of termination of RNA polymerase II transcription.","definition_xrefs":["GOC:vw","GOC:krc","PMID:29899453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"negative regulation of termination of DNA-templated transcription","termid":"GO:0060567"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription","termid":"GO:1904594"},{"relation_name":"negatively_regulates","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"negative regulation of termination of RNA polymerase II transcription","synonyms":[{"name":"down regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"down regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"down regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"down regulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"down regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"down regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"down-regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"down-regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"down-regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"down-regulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"down-regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"down-regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"downregulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"downregulation of RNA polymerase II transcription termination","type":"exact"},{"name":"downregulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"downregulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"downregulation of transcription termination from Pol II promoter","type":"exact"},{"name":"downregulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"negative regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"negative regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"negative regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"negative regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"repression of RNA 3'-end formation by RNA polymerase II","type":"narrow"},{"name":"repression of RNA polymerase II transcription termination","type":"narrow"},{"name":"repression of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"repression of termination of RNA polymerase II transcription","type":"narrow"},{"name":"repression of transcription termination from Pol II promoter","type":"narrow"},{"name":"repression of transcription termination from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0120191"}


id: FYPO:0003597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is abolished.","definition_xrefs":["GO:0034472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal snRNA 3'-end processing","termid":"FYPO:0003596"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"abolished snRNA 3'-end processing","synonyms":[{"name":"abolished snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abolished snRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"snRNA 3'-end processing abolished","type":"exact"}],"termid":"FYPO:0003597"}


id: GO:0010937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic microtubule depolymerization.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"regulates","term_name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"regulation of cytoplasmic microtubule depolymerization","termid":"GO:0010937"}


id: GO:0005261
data:
  {"annotated_genes":["SJAG_02598","SJAG_04668","SJAG_05342","SJAG_02019","SJAG_00133","SJAG_02564","SJAG_MIT09","SJAG_07003","SJAG_02322","SJAG_05229","SJAG_00836","SJAG_03114","SJAG_05204","SJAG_01090","SJAG_04122","SJAG_03925","SJAG_02532","SJAG_MIT15","SJAG_04471","SJAG_MIT37","SJAG_03895","SJAG_00438","SJAG_00985","SJAG_00542","SJAG_02105","SJAG_02877","SJAG_00915"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88431,110602,91743,113570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[105513,92041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[95718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[99890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[97912,90889,112023,115252,85166,115258,115264,89913,88888,104928,99774,88887,99151,99804,103950,101127,104040,89316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"},{"annotations":[88373,88432,110094,95719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a monoatomic cation through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:mtg_transport","GOC:pr","GOC:def","ISBN:0815340729","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transporter activity","termid":"GO:0008324"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01090":null,"SJAG_02019":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02877":null,"SJAG_03114":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04471":null,"SJAG_04668":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05342":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"monoatomic cation channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015281","GO:0015338","Reactome:R-HSA-1168376","Reactome:R-HSA-9712190","Reactome:R-HSA-169683","Reactome:R-HSA-1296043","Reactome:R-HSA-2089943","Reactome:R-HSA-4420052","Reactome:R-HSA-9706720","Reactome:R-HSA-9754616","Reactome:R-HSA-9837835","Reactome:R-HSA-426223"],"synonyms":[{"name":"cation channel activity","type":"broad"},{"name":"cation diffusion facilitator activity","type":"exact"},{"name":"non-selective cation channel activity","type":"narrow"}],"termid":"GO:0005261","terms_by_termid":{"GO:0005227":null,"GO:0005262":null,"GO:0008331":null,"GO:0015275":null,"GO:0046933":null,"GO:0140135":null}}


id: PBO:0079222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 1","termid":"PBO:0079222"}


id: FYPO:0001272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and DNA becomes spread into an indistinct mass along much of the length of the mitotic spindle.","definition_xrefs":["PomBase:mah","PMID:22711988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete, unequal mitotic sister chromatid segregation","termid":"FYPO:0001271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000337","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"incomplete, unequal mitotic sister chromatid segregation, with smeared DNA","synonyms":[{"name":"incomplete, unequal mitotic sister chromatid segregation, with smeared DNA during vegetative growth","type":"exact"},{"name":"incomplete, unequal mitotic sister chromatid separation, with smeared DNA","type":"related"},{"name":"incomplete, unequal sister chromatid segregation, with smeared DNA during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001272"}


id: GO:0120339
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short portion of the radial spoke that is directly anchored to the A microtubule of an axonemal microtubule doublet.","definition_xrefs":["GOC:krc","PMID:22754630","PMID:25694453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"radial spoke base","termid":"GO:0120339"}


id: PBO:0054964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2378","termid":"PBO:0054964"}


id: PBO:0085434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; specific for spermine; localizes to the plasma membrane; transcription of TPO2 is regulated by Haa1p; TPO2 has a paralog, TPO3, that arose from the whole genome duplication","termid":"PBO:0085434"}


id: MOD:00341
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to N-methyl-L-isoleucine.","definition_xrefs":["PubMed:11875433","RESID:AA0336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated isoleucine","termid":"MOD:00715"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-isoleucine","synonyms":[{"name":"(2S,3S)-2-methylamino-3-methylpentanoic acid","type":"exact"},{"name":"MOD_RES N-methylisoleucine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-isoleucine","type":"exact"},{"name":"N-methylated L-isoleucine","type":"exact"},{"name":"N-methylisoleucine","type":"exact"},{"name":"NMe1Ile","type":"exact"}],"termid":"MOD:00341"}


id: GO:0043952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which unfolded proteins are transported across the cytoplasmic membrane in Gram-positive and Gram-negative bacteria by the Sec complex, in a process involving proteolytic cleavage of an N-terminal signal peptide.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"protein transport by the Sec complex","synonyms":[{"name":"protein secretion by the Sec complex","type":"narrow"},{"name":"protein translocation by the Sec complex","type":"narrow"}],"termid":"GO:0043952"}


id: PBO:0053968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1278","termid":"PBO:0053968"}


id: GO:0060404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of tubulin heterodimers from one or both ends of an axonemal microtubule. An axonemal microtubule is a microtubule in the axoneme of a cilium or flagellum; an axoneme contains nine modified doublet microtubules surrounding a pair of single microtubules.","definition_xrefs":["GOC:dph","GOC:krc","GOC:tb","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"},{"relation_name":"is_a","term_name":"cilium disassembly","termid":"GO:0061523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"axonemal microtubule depolymerization","termid":"GO:0060404"}


id: FYPO:0002852
data:
  {"alleles_by_uniquename":{"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04280":null,"SJAG_04522":null},"genotype_count":1,"genotypes_by_uniquename":{"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to cell tip during vegetative growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"increased protein localization to cell end during vegetative growth","type":"exact"},{"name":"increased protein localization to cell tip during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002852","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null}}


id: GO:0072571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to monomeric ADP-D-ribose, an ADP-aldose having ribose as the aldose fragment.","definition_xrefs":["GOC:sart","PMID:20088964","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-D-ribose binding","termid":"GO:0072570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mono-ADP-D-ribose binding","synonyms":[{"name":"mADPr binding","type":"exact"},{"name":"mono-ADP-ribose binding","type":"broad"}],"termid":"GO:0072571"}


id: PBO:0071294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 17","termid":"PBO:0071294"}


id: GO:0004180
data:
  {"annotated_genes":["SJAG_00975","SJAG_01868","SJAG_00451","SJAG_02117","SJAG_03586","SJAG_04819"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84245,105516],"is_not":false,"summary":null,"term":"GO:0004180"},{"annotations":[73101,90514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004181"},{"annotations":[84246,87845,100514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single C-terminal amino acid residue from a polypeptide chain.","direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00451":null,"SJAG_00975":null,"SJAG_01868":null,"SJAG_02117":null,"SJAG_03586":null,"SJAG_04819":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0008233","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carboxypeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1247910","Reactome:R-HSA-9753632","RHEA:28783"],"termid":"GO:0004180","terms_by_termid":{"GO:0004180":null,"GO:0004181":null,"GO:0004185":null}}


id: PR:O94287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized chloride channel protein C887.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.02","synonyms":[{"name":"Spom972h-SPBC887.02","type":"exact"}],"termid":"PR:O94287"}


id: FYPO:0003575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K9 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K9 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003575"}


id: PBO:0064971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 27","termid":"PBO:0064971"}


id: PBO:0067760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 60","termid":"PBO:0067760"}


id: PBO:0050696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 9 pseudogene 2","termid":"PBO:0050696"}


id: PBO:0056818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 11","termid":"PBO:0056818"}


id: GO:0039011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pronephric nephron proximal tubule are generated and organized. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"},{"relation_name":"is_a","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"},{"relation_name":"part_of","term_name":"pronephric proximal tubule development","termid":"GO:0035776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric proximal tubule morphogenesis","synonyms":[{"name":"pronephros proximal tubule morphogenesis","type":"exact"}],"termid":"GO:0039011"}


id: PBO:0004826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Lea1 (predicted)","termid":"PBO:0004826"}


id: PBO:0051503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IK cytokine","termid":"PBO:0051503"}


id: GO:0061238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an epithelium that contributes to the shaping of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity involved in nephron morphogenesis","termid":"GO:0072046"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity involved in mesonephric nephron morphogenesis","synonyms":[{"name":"establishment of planar cell polarity involved in mesonephric nephron morphogenesis","type":"narrow"}],"termid":"GO:0061238"}


id: PBO:0078648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 2-4","termid":"PBO:0078648"}


id: GO:0033766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + quinolin-2-ol = H2O + NAD+ + quinoline-2,8-diol.","definition_xrefs":["EC:1.14.13.61","RHEA:22080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyquinoline 8-monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.61-RXN","KEGG_REACTION:R05158"],"synonyms":[{"name":"2-oxo-1,2-dihydroquinoline 8-monooxygenase activity","type":"related"},{"name":"quinolin-2(1H)-one,NADH:oxygen oxidoreductase (8-oxygenating) activity","type":"related"}],"termid":"GO:0033766"}


id: GO:0043124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a canonical NF-kappaB signaling cascade.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of canonical NF-kappaB signal transduction","termid":"GO:0043122"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"canonical NF-kappaB signal transduction","termid":"GO:0007249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of canonical NF-kappaB signal transduction","synonyms":[{"name":"down regulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"down-regulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"downregulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"inhibition of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"negative regulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"negative regulation of I-kappaB kinase/NF-kappaB signaling","type":"exact"}],"termid":"GO:0043124"}


id: GO:0020013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont organism modulates the frequency, rate or extent of erythrocyte aggregation in its host organism, e.g. the binding of parasite-infected erythrocytes to uninfected erythrocytes.","definition_xrefs":["PMID:21305024","GOC:add","GOC:dgh","GOC:mb","GOC:pr","PMID:19467172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"erythrocyte aggregation","termid":"GO:0034117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"modulation by symbiont of host erythrocyte aggregation","secondary_identifiers":["Wikipedia:Rosetting"],"synonyms":[{"name":"rosetting","type":"exact"}],"termid":"GO:0020013"}


id: PBO:0111936
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKC subfamily","termid":"PBO:0111936"}


id: PBO:0053249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 3","termid":"PBO:0053249"}


id: FYPO:0002100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an 3'-5' DNA helicase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652","FYPO:0000707","FYPO:0005447","FYPO:0000661","FYPO:0000654","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal 3'-5' DNA helicase activity","termid":"FYPO:0002100"}


id: PBO:0035964
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_number_of_Rad52_foci_during_mitotic_S_phase","termid":"PBO:0035964"}


id: PBO:0082383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 3 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit C10","termid":"PBO:0082383"}


id: SO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"12 or 23 nucleotide spacer between the J-nonamer and the J-heptamer of a J-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"J_gene_recombination_feature","termid":"SO:0000302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_spacer","synonyms":[{"name":"J spacer","type":"exact"},{"name":"J-SPACER","type":"exact"}],"termid":"SO:0000517"}


id: PBO:0054514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1914","termid":"PBO:0054514"}


id: PBO:0026683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_at_low_temperature","termid":"PBO:0026683"}


id: GO:0048811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the analia of the male are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc.","definition_xrefs":["GOC:mtg_sensu","PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"analia morphogenesis","termid":"GO:0048809"},{"relation_name":"part_of","term_name":"male analia development","termid":"GO:0045496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male analia morphogenesis","termid":"GO:0048811"}


id: SO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The junction in a genome where a transposable_element has inserted.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_site","termid":"SO:0000366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_insertion_site","synonyms":[{"name":"transposable element insertion site","type":"exact"}],"termid":"SO:0000368"}


id: PBO:0031761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_in_mitotic_G2_phase","termid":"PBO:0031761"}


id: PBO:0013837
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Choline Transporter-Like","termid":"PBO:0013837"}


id: PBO:0043969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta like 2, pseudogene","termid":"PBO:0043969"}


id: PBO:0030356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated_cell_during_cellular_hyperosmotic_response","termid":"PBO:0030356"}


id: GO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain 2,3-saturated fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a short-chain (2E)-enoyl-CoA + reduced [electron-transfer flavoprotein]. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["RHEA:47196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"short-chain fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.8.1","MetaCyc:RXN-13449","KEGG_REACTION:R01178"],"synonyms":[{"name":"butanoyl-CoA dehydrogenase","type":"narrow"},{"name":"butyryl dehydrogenase","type":"narrow"},{"name":"short-chain acyl CoA dehydrogenase","type":"exact"},{"name":"short-chain-acyl-CoA dehydrogenase activity","type":"exact"},{"name":"unsaturated acyl-CoA reductase","type":"broad"}],"termid":"GO:0016937"}


id: GO:2000716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034183"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:2000715"},{"relation_name":"negatively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:0071959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"negative regulation of maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:2000716"}


id: FYPO:0006800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of centromeres and associated kinetochores into a cluster at the nuclear periphery is decreased during interphase of the mitotic cell cycle. Centromere-kinetochore complexes normally cluster near the old spindle pole body during mitotic interphase.","definition_xrefs":["PMID:29180432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal centromere clustering at nuclear periphery","termid":"FYPO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"decreased centromere clustering at nuclear periphery during mitotic interphase","synonyms":[{"name":"centromere declustering during mitotic interphase","type":"exact"},{"name":"decreased centromere clustering at SPB during mitotic interphase","type":"related"},{"name":"decreased centromere clustering at nuclear periphery during interphase during vegetative growth","type":"exact"},{"name":"decreased centromere clustering at nuclear periphery during interphase of mitotic cell cycle","type":"related"},{"name":"decreased centromere clustering at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased centromere-SPB clustering during mitotic interphase","type":"related"},{"name":"decreased inter-centromere connection during mitotic interphase","type":"exact"},{"name":"decreased kinetochore clustering at SPB during mitotic interphase","type":"related"},{"name":"decreased kinetochore clustering at old mitotic spindle pole body during mitotic interphase","type":"related"},{"name":"decreased kinetochore clustering at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased kinetochore localization at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased mitotic centromere clustering at nuclear periphery during mitotic interphase","type":"exact"}],"termid":"FYPO:0006800"}


id: PBO:0040596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 1","termid":"PBO:0040596"}


id: PBO:0074607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 12","termid":"PBO:0074607"}


id: PBO:0079959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP8 pseudogene 1","termid":"PBO:0079959"}


id: FYPO:0006057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuole fusion, the merging of two vacuole membranes to form a single vacuole, is abnormal.","definition_xrefs":["GO:0042144","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole organization","termid":"FYPO:0002803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal vacuole fusion","synonyms":[{"name":"abnormal homotypic vacuole fusion","type":"exact"},{"name":"abnormal vacuole fusion, non-autophagic","type":"exact"}],"termid":"FYPO:0006057"}


id: PBO:0012255
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratrico peptide repeat","termid":"PBO:0012255"}


id: GO:0016545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male insect vibrates his wings. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior, veined wing extension","termid":"GO:0048065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, veined wing vibration","synonyms":[{"name":"male courtship behavior, wing vibration","type":"related"},{"name":"male courtship behaviour, veined wing vibration","type":"exact"},{"name":"male courtship behaviour, wing vibration","type":"related"}],"termid":"GO:0016545"}


id: GO:1990866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sustained stimulus indicating lowered oxygen tension.","definition_xrefs":["PMID:24055447"],"gene_count":0,"genotype_count":0,"name":"obsolete response to sustained hypoxia (obsolete GO:1990866)","termid":"GO:1990866"}


id: GO:2000358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of kidney smooth muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell differentiation","termid":"GO:0051152"},{"relation_name":"is_a","term_name":"regulation of kidney smooth muscle cell differentiation","termid":"GO:2000356"},{"relation_name":"positively_regulates","term_name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of kidney smooth muscle cell differentiation","termid":"GO:2000358"}


id: SO:3000000
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene component region which acts as a recombinational unit of a gene whose functional form is generated through somatic recombination.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_component_region","termid":"SO:0000842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_segment","synonyms":[{"name":"gene segment","type":"exact"}],"termid":"SO:3000000"}


id: GO:0004138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyguanosine + ATP = ADP + dGMP + 2 H+.","definition_xrefs":["EC:2.7.1.113","RHEA:19201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside kinase activity","termid":"GO:0019136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"deoxyguanosine kinase activity","secondary_identifiers":["KEGG_REACTION:R01967","MetaCyc:DEOXYGUANOSINE-KINASE-RXN"],"synonyms":[{"name":"(dihydroxypropoxymethyl)guanine kinase activity","type":"related"},{"name":"2'-deoxyguanosine kinase activity","type":"related"},{"name":"ATP:deoxyguanosine 5'-phosphotransferase activity","type":"related"},{"name":"NTP-deoxyguanosine 5'-phosphotransferase activity","type":"related"},{"name":"deoxyguanosine kinase (phosphorylating)","type":"related"}],"termid":"GO:0004138"}


id: PBO:0082759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; essential protein required for splicing and for assembly of SF3b","termid":"PBO:0082759"}


id: GO:0035929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any steroid that acts as a hormone into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"steroid hormone secretion","termid":"GO:0035929"}


id: GO:0051367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The decanoylation of peptidyl-serine to form peptidyl-O3-decanoyl-L-serine, typical of the protein ghrelin.","definition_xrefs":["PMID:12630926","GOC:jsg","RESID:AA0385"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine decanoylation (obsolete GO:0051367)","termid":"GO:0051367"}


id: GO:0032047
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A double-membrane-bounded organelle that functions in iron-sulfur protein maturation; evolutionarily derived from mitochondria. The mitosome has been detected only in anaerobic or microaerophilic organisms that do not have mitochondria, such as Entamoeba histolytica, Giardia intestinalis and several species of Microsporidia. These organisms are not capable of gaining energy from oxidative phosphorylation, which is normally performed by mitochondria.","definition_xrefs":["GOC:giardia","PMID:14614504","PMID:10361303","PMID:24316280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitosome","secondary_identifiers":["Wikipedia:Mitosome"],"synonyms":[{"name":"crypton","type":"exact"}],"termid":"GO:0032047"}


id: PBO:0110475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETFRF1 pseudogene 1","termid":"PBO:0110475"}


id: GO:1904365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokinesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8679543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"chemokinesis","termid":"GO:0042466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chemokinesis","termid":"GO:1904365"}


id: GO:0032770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a monooxygenase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monooxygenase activity","termid":"GO:0032768"},{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monooxygenase activity","synonyms":[{"name":"activation of monooxygenase activity","type":"narrow"},{"name":"stimulation of monooxygenase activity","type":"narrow"},{"name":"up regulation of monooxygenase activity","type":"exact"},{"name":"up-regulation of monooxygenase activity","type":"exact"},{"name":"upregulation of monooxygenase activity","type":"exact"}],"termid":"GO:0032770"}


id: PBO:0082365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Auxilin-like protein involved in vesicular transport; clathrin-binding protein required for uncoating of clathrin-coated vesicles; required for propagation of [URE3] prion variant","termid":"PBO:0082365"}


id: GO:0102143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carboxynorspermidine + NADP + H2O = L-aspartic acid 4-semialdehyde betaine + trimethylenediaminium + NADPH + H+.","definition_xrefs":["EC:1.5.1.43","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"carboxynorspermidine dehydrogenase I activity","secondary_identifiers":["RHEA:34115","MetaCyc:RXN-11565"],"termid":"GO:0102143"}


id: PBO:0085908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; protein abundance increases in response to DNA replication stress","termid":"PBO:0085908"}


id: PR:P50528
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase PLK1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00894","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase plo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.16","secondary_identifiers":["UniProtKB:P50528"],"synonyms":[{"name":"Spom972h-PLK1","type":"exact"}],"termid":"PR:P50528"}


id: PBO:0071077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 79","termid":"PBO:0071077"}


id: PBO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex subunit Vps17","termid":"PBO:0000555"}


id: FYPO:0000650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal. The septation index is the proportion of the population undergoing septation at any given time, and is usually around 10% (varying between 7-15%) for wild type.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased septation index","synonyms":[{"name":"increased number of septated cells","type":"exact"},{"name":"increased septation","type":"related"},{"name":"septated","type":"related"}],"termid":"FYPO:0000650"}


id: PBO:0050656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 6, pseudogene","termid":"PBO:0050656"}


id: GO:0047159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-(1Z-alkenyl)-sn-glycero-3-phosphocholine + an acyl-CoA = 1-O-(1Z-alkenyl)-2-acyl-sn-glycero-3-phosphocholine + CoA.","definition_xrefs":["RHEA:10344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"plasmalogen synthase activity","secondary_identifiers":["EC:2.3.1.25","MetaCyc:PLASMALOGEN-SYNTHASE-RXN"],"synonyms":[{"name":"1-alkenylglycerophosphocholine O-acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-alkenylglycerophosphocholine O-acyltransferase activity","type":"related"}],"termid":"GO:0047159"}


id: GO:0004462
data:
  {"annotated_genes":["SJAG_04726"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98905],"is_not":false,"summary":null,"term":"GO:0004462"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-S-lactoylglutathione = glutathione + methylglyoxal.","definition_xrefs":["EC:4.4.1.5","RHEA:19069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lactoylglutathione lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02530","MetaCyc:GLYOXI-RXN","Reactome:R-HSA-5694071"],"synonyms":[{"name":"(R)-S-lactoylglutathione methylglyoxal-lyase (isomerizing) activity","type":"related"},{"name":"(R)-S-lactoylglutathione methylglyoxal-lyase (isomerizing; glutathione-forming)","type":"related"},{"name":"aldoketomutase activity","type":"related"},{"name":"glyoxalase I activity","type":"related"},{"name":"glyoxylase I","type":"related"},{"name":"ketone-aldehyde mutase activity","type":"related"},{"name":"methylglyoxalase activity","type":"related"}],"termid":"GO:0004462","terms_by_termid":{"GO:0004462":null}}


id: FYPO:0001153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of methylamine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular methylamine level","synonyms":[{"name":"normal cellular methylamine accumulation","type":"related"},{"name":"normal cellular methylamine level during mitotic cell cycle","type":"related"},{"name":"normal cellular methylamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001153"}


id: PBO:0042859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 77","termid":"PBO:0042859"}


id: PBO:0060845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal growth regulator 1","termid":"PBO:0060845"}


id: PBO:0056769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 21A pseudogene 1","termid":"PBO:0056769"}


id: GO:0043993
data:
  {"annotated_genes":["SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87439],"is_not":false,"summary":null,"term":"GO:0043993"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 18) = CoA + histone H3 N6-acetyl-L-lysine (position 18).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0034212"}],"interesting_parent_ids":["GO:0034212","GO:0140096","GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H3K18 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.48"],"synonyms":[{"name":"histone H3-K18 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K18 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K18 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K18 specific)","type":"exact"}],"termid":"GO:0043993","terms_by_termid":{"GO:0043993":null}}


id: GO:0009316
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme complex composed of subunits leuC and leuD. Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.","definition_xrefs":["GOC:jl","MetaCyc:3-ISOPROPYLMALISOM-CPLX","PMID:7026530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"3-isopropylmalate dehydratase complex","synonyms":[{"name":"isopropylmalate isomerase complex","type":"exact"}],"termid":"GO:0009316"}


id: PBO:0111335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1754 family, human FAM32A homolog, implicated in mRNA splicing or surveillance","termid":"PBO:0111335"}


id: PBO:0070016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1313, pseudogene","termid":"PBO:0070016"}


id: MOD:01550
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["Unimod:730#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01550"}


id: PBO:0066991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 294","termid":"PBO:0066991"}


id: PBO:0089972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-M, glycosylphosphatidylinositol-mannosyltransferase I complex subunit pig-M","termid":"PBO:0089972"}


id: PBO:0073039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 2","termid":"PBO:0073039"}


id: PBO:0065377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 5","termid":"PBO:0065377"}


id: PBO:0073107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sidekick cell adhesion molecule 2","termid":"PBO:0073107"}


id: PBO:0113752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase (predicted by Pfam-N)","termid":"PBO:0113752"}


id: GO:0004508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a C21-steroid + O2 + reduced [NADPH--hemoprotein reductase] = a 17alpha-hydroxy-C21-steroid + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:65760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"steroid 17-alpha-monooxygenase activity","secondary_identifiers":["Reactome:R-HSA-9035956","MetaCyc:STEROID-17-ALPHA-MONOOXYGENASE-RXN","Reactome:R-HSA-193099","Reactome:R-HSA-193072","Reactome:R-HSA-9035954","Reactome:R-HSA-193068","EC:1.14.14.19","Reactome:R-HSA-193070","Reactome:R-HSA-5601843"],"synonyms":[{"name":"17alpha-hydroxylase-C17,20 lyase activity","type":"related"},{"name":"cytochrome P-450 (P-45017alpha,lyase)","type":"related"},{"name":"cytochrome P450 CYP17","type":"narrow"},{"name":"cytochrome P45017alpha","type":"related"},{"name":"cytochrome p450 XVIIA1 activity","type":"narrow"},{"name":"steroid 17-alpha-hydroxylase activity","type":"exact"},{"name":"steroid 17-alpha-hydroxylase-C17-20 lyase activity","type":"exact"},{"name":"steroid 17-alpha-hydroxylase/17,20 lyase activity","type":"related"},{"name":"steroid 17alpha-hydroxylase activity","type":"related"},{"name":"steroid 17alpha-monooxygenase activity","type":"related"},{"name":"steroid 17alphahydroxylase/17,20 lyase activity","type":"related"},{"name":"steroid,hydrogen-donor:oxygen oxidoreductase (17alpha-hydroxylating)","type":"related"}],"termid":"GO:0004508"}


