# terms

id: FYPO:0001200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which the response to calcium starvation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to calcium starvation","synonyms":[{"name":"abnormal cellular response to calcium depletion","type":"exact"},{"name":"abnormal cellular response to calcium deprivation","type":"exact"},{"name":"abnormal cellular response to calcium ion starvation","type":"exact"},{"name":"abnormal cellular response to calcium starvation during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to calcium starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0001200"}


id: GO:1990788
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein repressing GLI's transcription factor activity when SMO signaling is inactive. Upon ligand binding to the upstream receptor PTC (Patched) GLI dissociates from SUFU and activates transcription of hedgehog-target genes. In mammals it consists of SUFU and one of the GLI family proteins.","definition_xrefs":["PMID:24311597","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"GLI-SUFU complex","termid":"GO:1990788"}


id: PBO:0004340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dienelactone hydrolase family (predicted)","termid":"PBO:0004340"}


id: GO:0046842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trisporic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisporic acid metabolic process","termid":"GO:0046841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"trisporic acid biosynthetic process","synonyms":[{"name":"trisporic acid anabolism","type":"exact"},{"name":"trisporic acid biosynthesis","type":"exact"},{"name":"trisporic acid formation","type":"exact"},{"name":"trisporic acid synthesis","type":"exact"}],"termid":"GO:0046842"}


id: GO:0070132
data:
  {"annotated_genes":["SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translation","termid":"GO:0070129"},{"relation_name":"regulates","term_name":"mitochondrial translational initiation","termid":"GO:0070124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"regulation of mitochondrial translational initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrial translation initiation","type":"exact"}],"termid":"GO:0070132","terms_by_termid":{"GO:0070134":null}}


id: GO:1903895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the IRE1-mediated unfolded protein response.","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:22013210","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900102"},{"relation_name":"is_a","term_name":"regulation of IRE1-mediated unfolded protein response","termid":"GO:1903894"},{"relation_name":"negatively_regulates","term_name":"IRE1-mediated unfolded protein response","termid":"GO:0036498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of IRE1-mediated unfolded protein response","synonyms":[{"name":"down regulation of IRE1 branch of UPR","type":"exact"},{"name":"down regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"down regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"down regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"down regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"down regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"down regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"down regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"down-regulation of IRE1 branch of UPR","type":"exact"},{"name":"down-regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"down-regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"down-regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"down-regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"down-regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"down-regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"down-regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"downregulation of IRE1 branch of UPR","type":"exact"},{"name":"downregulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"downregulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"downregulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"downregulation of IRE1p unfolded protein response","type":"narrow"},{"name":"downregulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"downregulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"downregulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"inhibition of IRE1 branch of UPR","type":"narrow"},{"name":"inhibition of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"inhibition of IRE1-mediated unfolded protein response","type":"narrow"},{"name":"inhibition of IRE1alpha unfolded protein response","type":"narrow"},{"name":"inhibition of IRE1p unfolded protein response","type":"narrow"},{"name":"inhibition of UPR signaling by IRE1 stress sensor","type":"narrow"},{"name":"inhibition of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"narrow"},{"name":"inhibition of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"negative regulation of ERN1-mediated unfolded protein response","type":"related"},{"name":"negative regulation of IRE1 branch of UPR","type":"exact"},{"name":"negative regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"negative regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"negative regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"negative regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"negative regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"negative regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:1903895"}


id: SO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exon whereby at least one base is part of a codon (here, 'codon' is inclusive of the stop_codon).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_exon","synonyms":[{"name":"coding exon","type":"exact"}],"termid":"SO:0000195"}


id: FYECO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 28 days. This medium is then replaced with nitrogen containing minimal medium and cells are allowed to recover for 10-50 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"28 days nitrogen starvation followed by 10-50 hours recovery in minimal medium","termid":"FYECO:0000241"}


id: PBO:0061388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 48","termid":"PBO:0061388"}


id: PBO:0031703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_export","termid":"PBO:0031703"}


id: GO:0060830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Grouping of smoothened or patched receptors in a cilium, contributing to the smoothened signaling pathway.","definition_xrefs":["GOC:dph","GOC:cilia","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ciliary receptor clustering involved in smoothened signaling pathway","synonyms":[{"name":"ciliary receptor clustering involved in hedgehog signaling pathway","type":"exact"},{"name":"ciliary receptor clustering involved in hh signaling pathway","type":"exact"},{"name":"ciliary receptor clustering involved in smoothened signalling pathway","type":"exact"}],"termid":"GO:0060830"}


id: PBO:0039036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 13, pseudogene","termid":"PBO:0039036"}


id: MOD:00070
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-methyl-L-alanine.","definition_xrefs":["ChEBI:17519","RESID:AA0061","PubMed:323502","PubMed:7007074","PubMed:337304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated alanine","termid":"MOD:01461"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-alanine","synonyms":[{"name":"(2S)-2-methylaminopropanoic acid","type":"exact"},{"name":"2-methylazanylpropanoic acid","type":"exact"},{"name":"MOD_RES N-methylalanine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-alanine","type":"exact"},{"name":"N-methylalanine","type":"exact"},{"name":"N-methylated L-alanine","type":"exact"},{"name":"NMe1Ala","type":"exact"}],"termid":"MOD:00070"}


id: PBO:0051734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 5","termid":"PBO:0051734"}


id: PBO:0064894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B''gamma","termid":"PBO:0064894"}


id: PBO:0045079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 5","termid":"PBO:0045079"}


id: PBO:0084579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YBR100W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBR098W","termid":"PBO:0084579"}


id: SO:0002051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter whereby activity is induced by the presence or absence of biotic or abiotic factors.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible_promoter","synonyms":[{"name":"inducible promoter","type":"exact"}],"termid":"SO:0002051"}


id: PR:O74971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An autophagy protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13040:SF2","OMA:SCHPO03703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.10c","secondary_identifiers":["UniProtKB:O74971"],"synonyms":[{"name":"Spom972h-ATG5","type":"exact"},{"name":"meiotically up-regulated gene 77 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74971"}


id: GO:0009615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to virus","synonyms":[{"name":"response to viruses","type":"exact"}],"termid":"GO:0009615"}


id: GO:0060408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"}


id: PBO:0056757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 9","termid":"PBO:0056757"}


id: FYPO:0000990
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115413,115415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115414,115416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004695"},{"annotations":[115632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002227"},{"annotations":[115401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115488,115486,115487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01956":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_03689":null},"genotype_count":7,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"increased level of substance in cell","references_by_uniquename":{"PMID:23786411":null,"PMID:25318672":null,"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689","SJAG_00426","SJAG_03575","SJAG_03351","SJAG_01956"],"single_locus_genotype_uniquenames":["dcr1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased accumulation of substance in cell","type":"related"}],"termid":"FYPO:0000990","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001327":null,"FYPO:0002227":null,"FYPO:0004573":null,"FYPO:0004695":null,"FYPO:0004982":null}}


id: GO:0035288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Partitioning the insect head anlage into procephalic (labral, (ocular), antennal and intercalary) segments. The procephalic segments lie anterior to the gnathal (posterior head) segments, and are pattered by different segmentation gene cascades to the abdominal, thoracic and posterior head (gnathal) segments.","definition_xrefs":["PMID:15382136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head segmentation","termid":"GO:0035287"},{"relation_name":"part_of","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior head segmentation","synonyms":[{"name":"procephalic segmentation","type":"related"}],"termid":"GO:0035288"}


id: GO:0052835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4,6-trisphosphate + ATP = 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ADP + H+.","definition_xrefs":["RHEA:70287","PMID:11909533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"inositol-3,4,6-trisphosphate 1-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855169","MetaCyc:RXN-10984"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 1-kinase activity","type":"broad"},{"name":"IP3 1-kinase activity","type":"broad"},{"name":"Ins(3,4,6)P3 1-kinase activity","type":"related"},{"name":"inositol 3,4,6-trisphosphate 1-kinase activity","type":"exact"},{"name":"inositol-trisphosphate 1-kinase activity","type":"broad"},{"name":"ins(3,4,6)P(3) 1-kinase activity","type":"related"}],"termid":"GO:0052835"}


id: GO:0050639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-desacetyltaxuyunnanin C + acetyl-CoA = CoA + taxuyunnanin C.","definition_xrefs":["EC:2.3.1.163","RHEA:18837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"10-hydroxytaxane O-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.163-RXN","KEGG_REACTION:R07252"],"synonyms":[{"name":"acetyl coenzyme A: 10-hydroxytaxane O-acetyltransferase activity","type":"related"},{"name":"acetyl coenzyme A:10-hydroxytaxane O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:taxan-10beta-ol O-acetyltransferase","type":"broad"}],"termid":"GO:0050639"}


id: PBO:0075337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin related VPS10 domain containing receptor 2","termid":"PBO:0075337"}


id: PBO:0053791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1044","termid":"PBO:0053791"}


id: PBO:0050977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 20","termid":"PBO:0050977"}


id: PBO:0090542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4 kinase plasma membrane scaffold Efr3-like","termid":"PBO:0090542"}


id: GO:0003781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete actin bundling activity (obsolete GO:0003781)","synonyms":[{"name":"actin bundling activity","type":"exact"}],"termid":"GO:0003781"}


id: PBO:0075456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 6 like","termid":"PBO:0075456"}


id: PBO:0078545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM36 intronic transcript 1","termid":"PBO:0078545"}


id: PBO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 5","termid":"PBO:0050188"}


id: FYPO:0008078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic sister kinetochore association in meiotic metaphase I, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:34851403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic sister kinetochore association in meiotic metaphase I","termid":"FYPO:0008078"}


id: GO:0090642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dense, protein rich outermost layer of a microsporidian spore wall that lies above the endospore.","definition_xrefs":["PMID:19457051","PMID:25363531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"microsporidian-type exospore","termid":"GO:0090642"}


id: SO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recombinationally rearranged gene by inversion.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"recombinationally_rearranged_gene","termid":"SO:0000456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombinationally_inverted_gene","synonyms":[{"name":"recombinationally inverted gene","type":"exact"}],"termid":"SO:0000373"}


id: GO:0039567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT1 (signal transducer and activator of transcription-1) activity by retaining STAT1 in the cytoplasm, so STAT1 is unable to translocate to the nucleus to activate transcription of its target genes.","definition_xrefs":["PMID:17287281","PMID:16254375","PMID:14557668"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT1 activity by negative regulation of STAT protein import into nucleus (obsolete GO:0039567)","synonyms":[{"name":"cytoplasmic sequestration of STAT1","type":"broad"},{"name":"suppression by virus of host STAT1 activity by cytoplasmic sequestering of STAT1","type":"exact"}],"termid":"GO:0039567"}


id: PBO:0081445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 302","termid":"PBO:0081445"}


id: PBO:0063873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C pseudogene 2","termid":"PBO:0063873"}


id: GO:0050164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + CoA + NADP+ = CO2 + NADPH + succinyl-CoA.","definition_xrefs":["RHEA:21400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoglutarate dehydrogenase [NAD(P)+] activity","termid":"GO:0034601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxoglutarate dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.2.1.52","KEGG_REACTION:R00265","MetaCyc:OXOGLUTARATE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"2-oxoglutarate:NADP+ 2-oxidoreductase (CoA-succinylating)","type":"related"}],"termid":"GO:0050164"}


id: PBO:0078460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable A (pseudogene)","termid":"PBO:0078460"}


id: GO:0018461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fluoren-9-ol + 2 NADP+ = fluoren-9-one + 2 NADPH + 2 H+.","definition_xrefs":["EC:1.1.1.256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"fluoren-9-ol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0408","MetaCyc:9-FLUORENOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"9-fluorenol dehydrogenase activity","type":"exact"},{"name":"fluoren-9-ol:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0018461"}


id: MOD:01703
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to dehydrobutyrine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrobutyrine","synonyms":[{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"beta-elim-t","type":"exact"},{"name":"dHAbu","type":"exact"},{"name":"dehydro","type":"exact"},{"name":"phospholosst","type":"exact"}],"termid":"MOD:01703"}


id: GO:0002575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a basophil in response to an external stimulus.","definition_xrefs":["GOC:add","PMID:11292027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte chemotaxis","termid":"GO:0071621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil chemotaxis","termid":"GO:0002575"}


id: PBO:0067721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 19","termid":"PBO:0067721"}


id: GO:0036017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an erythropoietin stimulus. Erythropoietin is a glycoprotein hormone that controls erythropoiesis.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to erythropoietin","termid":"GO:0036017"}


id: FYPO:0006982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, and structure of the cell wall are normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cell wall morphology during vegetative growth","synonyms":[{"name":"normal cell wall morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006982"}


id: PBO:0075194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 6","termid":"PBO:0075194"}


id: PBO:0034709
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WSS1 like protein","termid":"PBO:0034709"}


id: PBO:0089677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII cargo receptor subunit Sec23a","termid":"PBO:0089677"}


id: PBO:0049478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.2 linker histone, cluster member","termid":"PBO:0049478"}


id: PBO:0088962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein, BUD22 family","termid":"PBO:0088962"}


id: PBO:0080348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 112 pseudogene","termid":"PBO:0080348"}


id: PR:O74427
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uridine-cytidine kinase-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04726","PRO:DNx","PANTHER:PTHR10285:SF17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.11c","secondary_identifiers":["UniProtKB:O74427"],"synonyms":[{"name":"Spom972h-UCKL1","type":"exact"},{"name":"uridine monophosphokinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74427"}


id: GO:2000579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATP-dependent microtubule motor activity, minus-end-directed.","definition_xrefs":["GOC:kmv","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of microtubule motor activity, minus-end-directed (obsolete GO:2000579)","synonyms":[{"name":"positive regulation of ATP-dependent microtubule motor activity, minus-end-directed","type":"exact"},{"name":"positive regulation of kinesin ATP phosphohydrolase (minus-end-directed)","type":"exact"},{"name":"positive regulation of minus-end-directed kinesin ATPase activity","type":"exact"},{"name":"positive regulation of minus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000579"}


id: PBO:0071585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 1","termid":"PBO:0071585"}


id: PBO:0068790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 27, pseudogene","termid":"PBO:0068790"}


id: RO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"The relationship linking a cell and its participation in a process that results in the fate of the cell being specified. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. ","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_specification_of","termid":"RO:0002356"}


id: PBO:0041480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 86","termid":"PBO:0041480"}


id: PBO:0027075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cytoplasm","termid":"PBO:0027075"}


id: PBO:0050212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 29","termid":"PBO:0050212"}


id: GO:0102446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rhamnetin + S-adenosyl-L-methionine = 3',4',5-trihydroxy-3,7-dimethoxyflavone + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"rhamnetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13932"],"termid":"GO:0102446"}


id: GO:1901207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heart looping.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"heart looping","termid":"GO:0001947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart looping","synonyms":[{"name":"regulation of cardiac looping","type":"exact"}],"termid":"GO:1901207"}


id: GO:0052232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052232)","synonyms":[{"name":"positive aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052232"}


id: GO:0048920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a relatively undifferentiated cell along the developing posterior lateral line, originating from cranial ectodermal placodes situated behind the ear. The neuromast primordium deposits proneuromasts along the lateral line, from which the neuromasts will develop.","definition_xrefs":["GOC:dgh","PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast primordium migration","termid":"GO:0048883"},{"relation_name":"part_of","term_name":"posterior lateral line development","termid":"GO:0048916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast primordium migration","synonyms":[{"name":"PLL neuromast primordium migration","type":"exact"}],"termid":"GO:0048920"}


id: PBO:0016552
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by Drosophila U2af50","termid":"PBO:0016552"}


id: GO:0021572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 6 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:curators","GOC:dph","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 development","termid":"GO:0021572"}


id: GO:0031820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y11 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"P2Y11 nucleotide receptor binding","synonyms":[{"name":"P2Y11 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031820"}


id: PBO:0083740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the conserved oligomeric Golgi complex; a cytosolic tethering complex that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments; the components of the Golgi complex are Gog1p through Cog8p","termid":"PBO:0083740"}


id: SO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 5th residue (a lysine), from the start of the H2A histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2A_acetylation_site","termid":"SO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AK5_acetylation_site","synonyms":[{"name":"H2AK5 acetylation site","type":"exact"},{"name":"H2AK5ac","type":"exact"}],"termid":"SO:0001938"}


id: PR:O74385
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- elp6 gene.","definition_xrefs":["UniProtKB:O74385","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 6 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.10","synonyms":[{"name":"Spom972h-elp6","type":"exact"}],"termid":"PR:O74385"}


id: PBO:0048913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member H","termid":"PBO:0048913"}


id: GO:0110063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the angiotensin-activated signaling pathway.","definition_xrefs":["GOC:lf","PMID:28784619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of angiotensin-activated signaling pathway","termid":"GO:0110061"},{"relation_name":"positively_regulates","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of angiotensin-activated signaling pathway","termid":"GO:0110063"}


id: PBO:0043836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1A","termid":"PBO:0043836"}


id: SO:1000026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from guanine to cytidine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_to_pyrimidine_transversion","termid":"SO:1000023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G_to_C_transversion","synonyms":[{"name":"G to C transversion","type":"exact"}],"termid":"SO:1000026"}


id: PBO:0085308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase with a broad substrate specificity; has some similarity to GPM1/YKL152C, a phosphoglycerate mutase; YOR283W is not an essential gene","termid":"PBO:0085308"}


id: GO:0031461
data:
  {"annotated_genes":["SJAG_03037","SJAG_00341","SJAG_02186","SJAG_05236","SJAG_01956","SJAG_03809","SJAG_03454","SJAG_04087","SJAG_00615","SJAG_00192","SJAG_00756","SJAG_01480","SJAG_04540","SJAG_04142","SJAG_03728","SJAG_02591","SJAG_04180","SJAG_00146","SJAG_02162","SJAG_04853","SJAG_02119","SJAG_01573","SJAG_04520","SJAG_00666","SJAG_03417","SJAG_04971","SJAG_02651","SJAG_04661","SJAG_02837","SJAG_01540","SJAG_00071","SJAG_01801","SJAG_02822","SJAG_04574","SJAG_05297","SJAG_00439","SJAG_05329","SJAG_03351","SJAG_03350","SJAG_04335","SJAG_03219","SJAG_03858","SJAG_02044","SJAG_03130","SJAG_01022","SJAG_03575","SJAG_03680","SJAG_03651","SJAG_03561"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85278],"is_not":false,"summary":null,"term":"GO:0031461"},{"annotations":[92666,96884,87770,95687,77881,89790,95692,108372,109289,97924,96217,86370,78916,78717,102300,91214,63053,98388,103733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005680"},{"annotations":[90390,92791,110150,106625,113879,114991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[90566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031463"},{"annotations":[107410,86937,84394,86889,92749,92792,101463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080008"},{"annotations":[107296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031464"},{"annotations":[95458,107363,93566,78142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035361"},{"annotations":[86631,90393,106463,93843,105219,100983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"},{"annotations":[101131,111971,98978,84596,93844,86632,94534,91597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019005"}]},"cv_name":"cellular_component","definition":"Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity.","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00146":null,"SJAG_00192":null,"SJAG_00341":null,"SJAG_00439":null,"SJAG_00615":null,"SJAG_00666":null,"SJAG_00756":null,"SJAG_01022":null,"SJAG_01480":null,"SJAG_01540":null,"SJAG_01573":null,"SJAG_01801":null,"SJAG_01956":null,"SJAG_02044":null,"SJAG_02119":null,"SJAG_02162":null,"SJAG_02186":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_02837":null,"SJAG_03037":null,"SJAG_03130":null,"SJAG_03219":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03417":null,"SJAG_03454":null,"SJAG_03561":null,"SJAG_03575":null,"SJAG_03651":null,"SJAG_03680":null,"SJAG_03728":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04087":null,"SJAG_04142":null,"SJAG_04180":null,"SJAG_04335":null,"SJAG_04520":null,"SJAG_04540":null,"SJAG_04574":null,"SJAG_04661":null,"SJAG_04853":null,"SJAG_04971":null,"SJAG_05236":null,"SJAG_05297":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cullin-RING ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"CRL complex","type":"exact"},{"name":"cullin complex","type":"exact"},{"name":"cullin-RING ligase","type":"related"}],"termid":"GO:0031461","terms_by_termid":{"GO:0005680":null,"GO:0019005":null,"GO:0031461":null,"GO:0031463":null,"GO:0031464":null,"GO:0035361":null,"GO:0043224":null,"GO:0043494":null,"GO:0080008":null}}


id: PBO:0039582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANO1 antisense RNA 1","termid":"PBO:0039582"}


id: PBO:0052508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 22","termid":"PBO:0052508"}


id: PBO:0060591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurocalcin delta","termid":"PBO:0060591"}


id: GO:0030700
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses glycine reductase activity; usually comprises three subunits, of which two are selenoproteins; the subunits are typically designated selenoprotein A, selenoprotein B and protein C.","definition_xrefs":["GOC:mah","PMID:2018775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"glycine reductase complex","termid":"GO:0030700"}


id: GO:0070486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one leukocyte to one or more other leukocytes via adhesion molecules.","definition_xrefs":["GOC:sl","PMID:12972508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"leukocyte aggregation","synonyms":[{"name":"immune cell aggregation","type":"exact"},{"name":"leucocyte aggregation","type":"exact"},{"name":"white blood cell aggregation","type":"exact"},{"name":"white corpuscle aggregation","type":"exact"}],"termid":"GO:0070486"}


id: PBO:0004337
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus GC donor","termid":"PBO:0004337"}


id: PR:O13874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized NOC2 family protein C1B3.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.09c","synonyms":[{"name":"Spom972h-SPAC1B3.09c","type":"exact"}],"termid":"PR:O13874"}


id: GO:0045603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of endothelial cell differentiation","termid":"GO:0045601"},{"relation_name":"positively_regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell differentiation","synonyms":[{"name":"activation of endothelial cell differentiation","type":"narrow"},{"name":"stimulation of endothelial cell differentiation","type":"narrow"},{"name":"up regulation of endothelial cell differentiation","type":"exact"},{"name":"up-regulation of endothelial cell differentiation","type":"exact"},{"name":"upregulation of endothelial cell differentiation","type":"exact"}],"termid":"GO:0045603"}


id: PATO:0000609
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's affording not completed blocked passage or view.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"open","termid":"PATO:0000610"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"closure incomplete","termid":"PATO:0000609"}


id: PBO:0070443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 like","termid":"PBO:0070443"}


id: GO:1990793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of substance P by a cell, in which the substance P acts as a neurotransmitter.","definition_xrefs":["PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"substance P secretion","termid":"GO:1990772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"substance P secretion, neurotransmission","termid":"GO:1990793"}


id: PBO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Cdc42","termid":"PBO:0001236"}


id: GO:0031449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of slow-twitch skeletal muscle contraction.","definition_xrefs":["GOC:tb","GOC:ef","GOC:dph","GOC:mtg_muscle","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of twitch skeletal muscle contraction","termid":"GO:0014724"},{"relation_name":"regulates","term_name":"slow-twitch skeletal muscle fiber contraction","termid":"GO:0031444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"regulation of slow-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031449"}


id: GO:0032500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently, in a non-covalent manner, with muramyl dipeptide; muramyl dipeptide is derived from peptidoglycan.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"muramyl dipeptide binding","termid":"GO:0032500"}


id: PBO:0090620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc6","termid":"PBO:0090620"}


id: GO:0044107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular alcohol metabolic process (obsolete GO:0044107)","termid":"GO:0044107"}


id: PBO:0065365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin and Sec7 domain containing","termid":"PBO:0065365"}


id: PBO:0011137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Pho7","termid":"PBO:0011137"}


id: GO:2000640
data:
  {"annotated_genes":["SJAG_03568","SJAG_01632","SJAG_02682","SJAG_01150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89726,89727,89728,109602,109603,109604,113173],"is_not":false,"summary":null,"term":"GO:2000640"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the SREBP signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"is_a","term_name":"regulation of SREBP signaling pathway","termid":"GO:2000638"},{"relation_name":"positively_regulates","term_name":"SREBP signaling pathway","termid":"GO:0032933"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01150":null,"SJAG_01632":null,"SJAG_02682":null,"SJAG_03568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of SREBP signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of SREBP-mediated signaling pathway","type":"exact"},{"name":"positive regulation of SREBP-mediated signalling pathway","type":"exact"}],"termid":"GO:2000640","terms_by_termid":{"GO:2000640":null}}


id: PBO:0048034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III and SPRY domain containing 1 like","termid":"PBO:0048034"}


id: GO:0030097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates.","definition_xrefs":["GOC:dgh","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemopoiesis","secondary_identifiers":["Wikipedia:Haematopoiesis"],"synonyms":[{"name":"blood cell biosynthesis","type":"exact"},{"name":"blood cell formation","type":"exact"},{"name":"haemopoiesis","type":"exact"},{"name":"hematopoiesis","type":"exact"}],"termid":"GO:0030097"}


id: PBO:0026964
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_population_growth_during_phosphate_starvation","termid":"PBO:0026964"}


id: GO:1990392
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A trimeric cell-cell fusion complex that serves as a scaffold for zippering up the extracellular domains, bringing the transmembrane segments into close proximity such that they can continue zippering within the two membranes into one. Two prefusion monomers cluster at the surface of adjacent cells. Parallel EFF-1 interactions occur across cells and a third monomer, which can come from either cell, adds on to make an intermediate, extended trimer.","definition_xrefs":["GOC:bhm","PMID:24725407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"EFF-1 complex","termid":"GO:1990392"}


id: PBO:0018040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix protein, YjgF family protein Mmf1","termid":"PBO:0018040"}


id: GO:0018390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methyl esterification of peptidyl-glutamic acid or peptidyl-glutamine to form the derivative glutamic acid 5-methyl ester.","definition_xrefs":["RESID:AA0072"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-glutamic acid 5-methyl ester biosynthetic process from peptidyl-glutamic acid or peptidyl-glutamine (obsolete GO:0018390)","synonyms":[{"name":"peptidyl-L-glutamic acid 5-methyl ester anabolism from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamic acid 5-methyl ester formation from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamic acid 5-methyl ester synthesis from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"}],"termid":"GO:0018390"}


id: PBO:0064557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannose kinase","termid":"PBO:0064557"}


id: PBO:0082084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase; synthesizes PRPP, which is required for nucleotide, histidine, and tryptophan biosynthesis; one of five related enzymes, which are active as heteromultimeric complexes","termid":"PBO:0082084"}


id: GO:0071524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrrolysine, N6-{[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine.","definition_xrefs":["PMID:17204561","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"pyrrolysine metabolic process","termid":"GO:0071525"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrrolysine biosynthetic process","synonyms":[{"name":"monomethylamine methyltransferase cofactor lysine adduct biosynthetic process","type":"exact"},{"name":"pyrrolysine anabolism","type":"exact"},{"name":"pyrrolysine biosynthesis","type":"exact"},{"name":"pyrrolysine formation","type":"exact"},{"name":"pyrrolysine synthesis","type":"exact"}],"termid":"GO:0071524"}


id: GO:2000416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"regulates","term_name":"eosinophil migration","termid":"GO:0072677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil migration","termid":"GO:2000416"}


id: PBO:0030592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_ornithine_level","termid":"PBO:0030592"}


id: GO:0014713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of branchiomeric skeletal muscle development. Branchiomeric skeletal muscle development is the process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of branchiomeric skeletal muscle development","termid":"GO:0014711"},{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle tissue development","termid":"GO:0048642"},{"relation_name":"negatively_regulates","term_name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branchiomeric skeletal muscle development","termid":"GO:0014713"}


id: GO:0072491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene, methylbenzene (formula C7H8), or any of its derivatives.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene-containing compound catabolic process","synonyms":[{"name":"toluene and derivative catabolic process","type":"exact"},{"name":"toluene-containing compound breakdown","type":"exact"},{"name":"toluene-containing compound catabolism","type":"exact"},{"name":"toluene-containing compound degradation","type":"exact"}],"termid":"GO:0072491"}


id: GO:0018654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyphenylacetate + NADH + O2 = NAD+ + OH- + homogentisate.","definition_xrefs":["PMID:8919815","UM-BBD_reactionID:r0252"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-phenylacetate hydroxylase activity (obsolete GO:0018654)","termid":"GO:0018654"}


id: GO:1903208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide-induced neuron death.","definition_xrefs":["PMID:24252804","GOC:PARL","GOC:bf","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of hydrogen peroxide-induced neuron death (obsolete GO:1903208)","synonyms":[{"name":"down regulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"down regulation of neuron death in response to H2O2","type":"exact"},{"name":"down regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"down regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"down-regulation of neuron death in response to H2O2","type":"exact"},{"name":"down-regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"downregulation of neuron death in response to H2O2","type":"exact"},{"name":"downregulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"inhibition of hydrogen peroxide-induced neuron death","type":"narrow"},{"name":"inhibition of neuron death in response to H2O2","type":"narrow"},{"name":"inhibition of neuron death in response to hydrogen peroxide","type":"narrow"},{"name":"inhibition of neuronal cell death in response to hydrogen peroxide","type":"narrow"},{"name":"negative regulation of neuron death in response to H2O2","type":"exact"},{"name":"negative regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"negative regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"neuroprotection against H2O2-induced cell death","type":"related"},{"name":"neuroprotection against hydrogen peroxide","type":"related"},{"name":"protection against H2O2-induced neuron death","type":"related"},{"name":"protection against hydrogen peroxide-induced neuron death","type":"related"}],"termid":"GO:1903208"}


id: PBO:0091376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 2","termid":"PBO:0091376"}


id: PBO:0064619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 6 homeobox 1","termid":"PBO:0064619"}


id: PBO:0005455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export mediator factor NEMF","termid":"PBO:0005455"}


id: PR:Q9US08
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo3 gene.","definition_xrefs":["UniProtKB:Q9US08","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.10","synonyms":[{"name":"Spom972h-spo3","type":"exact"}],"termid":"PR:Q9US08"}


id: GO:0099106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of a channel via direct interaction with it. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"ion channel regulator activity","termid":"GO:0099106"}


id: GO:0008967
data:
  {"annotated_genes":["SJAG_03108"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99742],"is_not":false,"summary":null,"term":"GO:0008967"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phosphoglycolate + H2O = glycolate + phosphate.","definition_xrefs":["RHEA:14369","EC:3.1.3.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphoglycolate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GPH-RXN","KEGG_REACTION:R01334"],"synonyms":[{"name":"2-phosphoglycolate phosphatase activity","type":"related"},{"name":"2-phosphoglycolate phosphohydrolase activity","type":"related"},{"name":"P-glycolate phosphatase activity","type":"related"},{"name":"phosphoglycolate hydrolase activity","type":"related"},{"name":"phosphoglycollate phosphatase activity","type":"related"}],"termid":"GO:0008967","terms_by_termid":{"GO:0008967":null}}


id: PBO:0062625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 2","termid":"PBO:0062625"}


id: PBO:0090097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-UTP complex subunit Utp8","termid":"PBO:0090097"}


id: GO:0036129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide (obsolete GO:0036129)","termid":"GO:0036129"}


id: PBO:0036458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family RNA binding protein involved in CCR4-NOT dependent deadenylation (predicted)","termid":"PBO:0036458"}


id: GO:0050110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions : D-galactosyl-3-(N-acetyl-beta-D-galactosaminyl)-L-serine + H2O = D-galactosyl-3-N-acetyl-beta-D-galactosamine + L-serine and D-galactosyl-3-(N-acetyl-beta-D-galactosaminyl)-L-threonyl + H2O = D-galactosyl-3-N-acetyl-beta-D-galactosamine + L-threonyl.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete endo-alpha-N-acetylgalactosaminidase activity (obsolete GO:0050110)","termid":"GO:0050110"}


id: PBO:0067559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 712, pseudogene","termid":"PBO:0067559"}


id: PBO:0024800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_or_regulates","termid":"PBO:0024800"}


id: PBO:0044592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBX2 antisense RNA 1","termid":"PBO:0044592"}


id: GO:1990543
data:
  {"annotated_genes":["SJAG_01890","SJAG_01589"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84303,98711],"is_not":false,"summary":null,"term":"GO:1990543"}]},"cv_name":"biological_process","definition":"The process in which S-adenosyl-L-methionine is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:14609944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosyl-L-methionine transmembrane transport","termid":"GO:1901962"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mitochondrial S-adenosyl-L-methionine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990543","terms_by_termid":{"GO:1990543":null}}


id: PBO:0045562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 11","termid":"PBO:0045562"}


id: PATO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000372 absolute distance value (obsolete PATO:0000372)","termid":"PATO:0000372"}


id: GO:0019202
data:
  {"annotated_genes":["SJAG_03457","SJAG_00881","SJAG_03141"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004072"},{"annotations":[86914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004349"},{"annotations":[106821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004413"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group, usually from ATP, to an amino acid substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00881":null,"SJAG_03141":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"amino acid kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019202","terms_by_termid":{"GO:0004072":null,"GO:0004349":null,"GO:0004413":null}}


id: GO:0014045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the endothelial barrier between the blood and the brain. The endothelial cells in the brain capillaries are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["GOC:dgh","GOC:dph","PMID:20080302","GOC:sart","PMID:30280653","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"},{"relation_name":"is_a","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of endothelial blood-brain barrier","synonyms":[{"name":"establishment of endothelial BBB","type":"exact"},{"name":"establishment of endothelial blood/brain barrier","type":"exact"}],"termid":"GO:0014045"}


id: CHEBI:67229
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conduritol B epoxide","termid":"CHEBI:67229"}


id: PBO:0109026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3102","termid":"PBO:0109026"}


id: SO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000971 DNA_replication_mode (obsolete SO:0000971)","synonyms":[{"name":"DNA replication mode","type":"exact"}],"termid":"SO:0000971"}


id: PBO:0044755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 39B pseudogene 1","termid":"PBO:0044755"}


id: PATO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"old","termid":"PATO:0000308"}


id: FYPO:0000976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to selenite ions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular response to selenite ion","synonyms":[{"name":"normal cellular response to selenite","type":"exact"},{"name":"normal cellular response to selenite ion during mitotic cell cycle","type":"related"},{"name":"normal cellular response to selenite ion during vegetative growth","type":"exact"}],"termid":"FYPO:0000976"}


id: PBO:0005547
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.48","termid":"PBO:0005547"}


id: PBO:0060022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 10","termid":"PBO:0060022"}


id: PBO:0086004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YOR062C has a paralog, YKR075C, that arose from the whole genome duplication","termid":"PBO:0086004"}


id: GO:0007403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a glial cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"glial cell fate commitment","termid":"GO:0021781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell fate determination","secondary_identifiers":["GO:0043361"],"termid":"GO:0007403"}


id: PBO:0064322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 4","termid":"PBO:0064322"}


id: PBO:0080239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 2","termid":"PBO:0080239"}


id: MOD:01675
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-(N-acetylaminohexosyl)-L-serine.","definition_xrefs":["OMSSA:184","Unimod:43#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-(N-acetylamino)hexosyl-L-serine","synonyms":[{"name":"(S)-2-amino-3-(2-acetamido-2-deoxy-beta-D-hexopyranosyloxy)propanoic acid","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"N-Acetylhexosamine","type":"related"},{"name":"O-(2-acetylamino-2-deoxy-beta-D-hexopyranosyl)-L-serine","type":"exact"},{"name":"O-(N-acetylhexosaminyl)serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O-seryl-beta-N-acetylhexosaminide","type":"exact"},{"name":"O3-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)-L-serine","type":"exact"},{"name":"OHexNAcSer","type":"exact"},{"name":"hexNAcS","type":"exact"}],"termid":"MOD:01675"}


id: MOD:00908
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies a glycine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified glycine residue","synonyms":[{"name":"ModGly","type":"exact"}],"termid":"MOD:00908"}


id: PBO:0068349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 126","termid":"PBO:0068349"}


id: PBO:0003764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Sme1","termid":"PBO:0003764"}


id: PBO:0041983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 27","termid":"PBO:0041983"}


id: PBO:0108708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 chaperone, CENP-A recruiting complex CENP-A chaperone Mis16","termid":"PBO:0108708"}


id: GO:0035401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-tyrosine (position 41) + ATP = histone H3-phosphotyrosine (position 41) + ADP. This reaction is the addition of a phosphate group to the tyrosine residue at position 41 of histone H3.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine kinase activity","termid":"GO:0004713"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0004672","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"histone H3Y41 kinase activity","secondary_identifiers":["RHEA:10596"],"synonyms":[{"name":"histone H3-Y41 kinase activity","type":"exact"},{"name":"histone kinase activity (H3-Y41 specific)","type":"exact"},{"name":"histone tyrosine kinase activity (H3-Y41 specific)","type":"exact"},{"name":"histone-tyrosine kinase activity (H3-Y41 specific)","type":"exact"}],"termid":"GO:0035401"}


id: PBO:0071820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 15","termid":"PBO:0071820"}


id: FYPO:0005404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosomes remain linear, but lose telomeric repeats. Subtelomeric DNA may also be lost.","definition_xrefs":["PMID:12930956","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0005447","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000641","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"telomeric regions absent from linear chromosomes","synonyms":[{"name":"telomeric regions absent from linear chromosomes during mitotic cell cycle","type":"related"},{"name":"telomeric regions absent from linear chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0005404"}


id: PBO:0052812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 78","termid":"PBO:0052812"}


id: PBO:0108943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 22","termid":"PBO:0108943"}


id: FYPO:0005167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at centromere inner repeat regions is decreased.","definition_xrefs":["PomBase:mah","PMID:12925774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin at centromere inner repeat","synonyms":[{"name":"decreased protein localisation to chromatin at centromere inner repeat","type":"exact"},{"name":"decreased protein localization to chromatin at centromere imr","type":"exact"},{"name":"decreased protein localization to chromatin at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at centromere inner repeat during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at centromere inner repeat","type":"exact"}],"termid":"FYPO:0005167"}


id: PBO:0017922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transmembrane transporter (predicted)","termid":"PBO:0017922"}


id: PBO:0080069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 34","termid":"PBO:0080069"}


id: PBO:0012830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp4","termid":"PBO:0012830"}


id: GO:0032606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of type I interferon due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["PMID:15546383","GOC:add","PMID:16681834","ISBN:0126896631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"type I interferon production","secondary_identifiers":["GO:0045351","GO:0072641"],"synonyms":[{"name":"interferon type I production","type":"exact"},{"name":"type I IFN production","type":"exact"},{"name":"type I interferon biosynthetic process","type":"narrow"},{"name":"type I interferon secretion","type":"narrow"}],"termid":"GO:0032606"}


id: PBO:0074404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 2B","termid":"PBO:0074404"}


id: GO:0034457
data:
  {"annotated_genes":["SJAG_02681","SJAG_03252","SJAG_02372"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87535,87705,89733],"is_not":false,"summary":null,"term":"GO:0034457"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a subcomplex of the 90S preribosome. In S. cerevisiae, it is composed of Mpp10p, Imp3p and Imp4p.","definition_xrefs":["PMID:17515605","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02372":null,"SJAG_02681":null,"SJAG_03252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0030684","GO:0005730","GO:0032991"],"is_obsolete":false,"name":"Mpp10 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034457","terms_by_termid":{"GO:0034457":null}}


id: PBO:0040508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin","termid":"PBO:0040508"}


id: SO:0001286
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5-formylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_formylcytidine","secondary_identifiers":["RNAMOD:025"],"synonyms":[{"name":"5-formylcytidine","type":"exact"},{"name":"f5C","type":"exact"},{"name":"five formylcytidine","type":"exact"}],"termid":"SO:0001286"}


id: GO:0045757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of actin polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actin polymerization and/or depolymerization (obsolete GO:0045757)","synonyms":[{"name":"negative regulation of actin polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045757"}


id: GO:0052053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host enzyme activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host catalytic activity (obsolete GO:0052053)","synonyms":[{"name":"down regulation by symbiont of host enzyme activity","type":"exact"},{"name":"down-regulation by symbiont of host enzyme activity","type":"exact"},{"name":"downregulation by symbiont of host enzyme activity","type":"exact"},{"name":"inhibition by symbiont of host enzyme activity","type":"narrow"},{"name":"inhibition of host enzyme activity","type":"exact"},{"name":"negative regulation by symbiont of host enzyme activity","type":"exact"},{"name":"negative regulation by symbiont of host molecular function","type":"broad"}],"termid":"GO:0052053"}


id: PBO:0084474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone a-factor; made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA1","termid":"PBO:0084474"}


id: PBO:0034124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spatially_coextensive_with","termid":"PBO:0034124"}


id: GO:0020025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Singlet microtubule that lie underneath the inner membrane pellicle complex and emanate from the basal ring of the conoid.","definition_xrefs":["GOC:mb","PMID:24800253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"subpellicular microtubule","termid":"GO:0020025"}


id: PBO:0066647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor 1","termid":"PBO:0066647"}


id: FYPO:0007426
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of the newly assembled spindle pole body into the nuclear envelope does not occur.","definition_xrefs":["PMID:22042620","PMID:19487457","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished new mitotic spindle pole body insertion into nuclear envelope","synonyms":[{"name":"abnormal establishment of old mitotic spindle pole body localization to nuclear envelope","type":"exact"},{"name":"abolished new mitotic SPB insertion into nuclear envelope","type":"exact"},{"name":"abolished new mitotic spindle pole body insertion into nuclear envelope during mitotic cell cycle","type":"related"},{"name":"abolished new mitotic spindle pole body insertion into nuclear envelope during vegetative growth","type":"exact"}],"termid":"FYPO:0007426"}


id: PBO:0070452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 9","termid":"PBO:0070452"}


id: GO:0002914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of central B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"regulation of central B cell tolerance induction","termid":"GO:0002895"},{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"regulates","term_name":"central B cell anergy","termid":"GO:0002341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of central B cell anergy","termid":"GO:0002914"}


id: GO:0140874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of paraherquonin, a meroterpenoid with a unique, highly congested hexacyclic molecular architecture.","definition_xrefs":["PMID:27602587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"paraherquonin biosynthetic process","synonyms":[{"name":"paraherquonin anabolism","type":"exact"},{"name":"paraherquonin biosynthesis","type":"exact"},{"name":"paraherquonin formation","type":"exact"},{"name":"paraherquonin synthesis","type":"exact"}],"termid":"GO:0140874"}


id: PBO:0080292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 56 pseudogene","termid":"PBO:0080292"}


id: PBO:0058731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6859-1","termid":"PBO:0058731"}


id: GO:0052623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delta2-isopentenyl diphosphate + ADP = diphosphate + N6-(delta(2)-isopentenyl)adenosine 5'-diphosphate.","definition_xrefs":["MetaCyc:RXN-4305"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP dimethylallyltransferase activity (obsolete GO:0052623)","synonyms":[{"name":"2-isopentenyl-diphosphate:ADP 2-isopentenyltransferase activity","type":"exact"},{"name":"ADP isopentenyltransferase activity","type":"exact"}],"termid":"GO:0052623"}


id: PBO:0004682
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae Spt4","termid":"PBO:0004682"}


id: PBO:0082936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family; involved in mRNA export from the nucleus, remodeling messenger ribonucleoprotein particles (mRNPs), with ATPase activity stimulated by Gle1p, IP6 and Nup159p; involved in translation termination along with Sup45p (eRF1); role in the cellular response to heat stress","termid":"PBO:0082936"}


id: PBO:0060201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 21, cell surface associated","termid":"PBO:0060201"}


id: GO:0043984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 16 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K16 acetylation (obsolete GO:0043984)","synonyms":[{"name":"histone H4 acetylation at K16","type":"exact"}],"termid":"GO:0043984"}


id: PBO:0052556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor G1","termid":"PBO:0052556"}


id: GO:0061899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-cis-retinal + 2 H+ + O2 + 2 reduced [adrenodoxin] = 11-cis-3,4-didehydro-retinal + 2 H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:27059013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"11-cis-retinal 3,4-desaturase activity","termid":"GO:0061899"}


id: SO:0000027
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_junction_loop","termid":"SO:0000026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_hook_turn","synonyms":[{"name":"RNA hook turn","type":"exact"},{"name":"hook turn","type":"related"},{"name":"hook-turn motif","type":"exact"}],"termid":"SO:0000027"}


id: GO:0002154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a thyroid hormone  binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"thyroid hormone receptor signaling pathway","synonyms":[{"name":"thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002154"}


id: PBO:0078300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-5","termid":"PBO:0078300"}


id: PBO:0029453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_cell","termid":"PBO:0029453"}


id: PBO:0083244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; extensively overlaps essential SMD1 gene encoding a U6 snRNP protein","termid":"PBO:0083244"}


id: PBO:0057051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR137 host gene","termid":"PBO:0057051"}


id: GO:0097562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the anterior and ventral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["PMID:16607022","ISBN:9780124260207","GOC:giardia","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left lateral basal body pair","termid":"GO:0097562"}


id: PBO:0080553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 12","termid":"PBO:0080553"}


id: GO:0046117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside catabolic process","termid":"GO:0042454"},{"relation_name":"is_a","term_name":"queuosine metabolic process","termid":"GO:0046116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"queuosine catabolic process","synonyms":[{"name":"queuosine breakdown","type":"exact"},{"name":"queuosine catabolism","type":"exact"},{"name":"queuosine degradation","type":"exact"}],"termid":"GO:0046117"}


id: PBO:0090847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi UDP-galactose transmembrane transporter Gms1","termid":"PBO:0090847"}


id: PBO:0067301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 386, pseudogene","termid":"PBO:0067301"}


id: PBO:0086807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YER039C-A is not an essential gene","termid":"PBO:0086807"}


id: PBO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (predicted)","termid":"PBO:0003175"}


id: GO:0008115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O2 + sarcosine = formaldehyde + glycine + H2O2.","definition_xrefs":["RHEA:13313","EC:1.5.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sarcosine oxidase activity","secondary_identifiers":["KEGG_REACTION:R00610","MetaCyc:SARCOX-RXN"],"synonyms":[{"name":"sarcosine:oxygen oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0008115"}


id: PBO:0003687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate adenylyltransferase","termid":"PBO:0003687"}


id: PBO:0070660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 31","termid":"PBO:0070660"}


id: PBO:0062585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 9","termid":"PBO:0062585"}


id: PBO:0042413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 25C","termid":"PBO:0042413"}


id: GO:1904158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal central apparatus.","definition_xrefs":["GOC:krc","PMID:9295136","GOC:TermGenie","GO_REF:0000079","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"axonemal central apparatus assembly","synonyms":[{"name":"axonemal central apparatus formation","type":"exact"}],"termid":"GO:1904158"}


id: FYPO:0004701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a cell does not alter the timing or rate of cell division when shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PMID:689088","PMID:872891","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"abolished cell division timing change upon nitrogen source shift","synonyms":[{"name":"abolished cell division rate change upon nitrogen source shift","type":"related"},{"name":"abolished change in cell division rate upon nitrogen source shift","type":"related"},{"name":"abolished change in cell division timing upon nitrogen source shift","type":"exact"},{"name":"abolished nutritional modulation of cell division","type":"related"},{"name":"unchanged cell division timing upon nitrogen source shift","type":"related"}],"termid":"FYPO:0004701"}


id: PATO:0001958
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of size which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of size","termid":"PATO:0001956"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased variability of size","synonyms":[{"name":"high variability of size","type":"exact"}],"termid":"PATO:0001958"}


id: FYPO:0000570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mating projection assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"decreased shmoo formation","synonyms":[{"name":"decreased conjugation tube formation","type":"exact"},{"name":"decreased mating projection assembly","type":"exact"},{"name":"decreased mating projection formation","type":"exact"},{"name":"decreased shmoo assembly","type":"exact"},{"name":"reduced shmoo formation","type":"exact"},{"name":"shmoo formation: decreased","type":"related"}],"termid":"FYPO:0000570"}


id: GO:0016471
data:
  {"annotated_genes":["SJAG_01447","SJAG_00212","SJAG_04955","SJAG_01817","SJAG_04015","SJAG_02782","SJAG_02023","SJAG_01913","SJAG_05294","SJAG_00516","SJAG_03406","SJAG_00136","SJAG_01471","SJAG_01397"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85876,86189,91710,96026,88075,100030],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[106013,96100,94997,84069,98776,114910,92678,97726],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen.","definition_xrefs":["GOC:mah","ISBN:0716743663","PMID:16449553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773","GO:0032991"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar hydrogen-translocating V-type ATPase complex","type":"exact"}],"termid":"GO:0016471","terms_by_termid":{"GO:0000220":null,"GO:0000221":null}}


id: PBO:0068230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 1","termid":"PBO:0068230"}


id: PR:Q12704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase subunit gamma-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04517","PANTHER:PTHR10267:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.22","secondary_identifiers":["UniProtKB:Q12704"],"synonyms":[{"name":"Spom972h-POLG","type":"exact"},{"name":"mitochondrial DNA polymerase catalytic subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q12704"}


id: PBO:0081836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 771","termid":"PBO:0081836"}


id: PBO:0114286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mon1-Ccz1 GEF complex subunit Ccz1","termid":"PBO:0114286"}


id: GO:0033873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + 5alpha-cholane-3alpha,7alpha,12alpha,24-tetrol = 3alpha,7alpha,12alpha-trihydroxy-5alpha-cholan-24-yl sulfate + adenosine 3',5'-diphosphate + H+.","definition_xrefs":["RHEA:16997","EC:2.8.2.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"petromyzonol sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R07797","MetaCyc:2.8.2.31-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:5alpha-cholan-3alpha,7alpha,12alpha,24-tetrol sulfotransferase activity","type":"related"},{"name":"PZ-SULT","type":"related"}],"termid":"GO:0033873"}


id: GO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a pro-T cell becomes committed to becoming an NK T cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell lineage commitment","termid":"GO:0002363"},{"relation_name":"part_of","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell lineage commitment","synonyms":[{"name":"NK T lymphocyte lineage commitment","type":"exact"},{"name":"NK T-cell lineage commitment","type":"exact"},{"name":"NK T-lymphocyte lineage commitment","type":"exact"},{"name":"natural killer T lymphocyte lineage commitment","type":"exact"},{"name":"natural killer T-cell lineage commitment","type":"exact"},{"name":"natural killer T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002364"}


id: PBO:0074598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 10","termid":"PBO:0074598"}


id: PBO:0034114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_III_bouton","termid":"PBO:0034114"}


id: PBO:0035897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_acetylation_during_vegetative_growth","termid":"PBO:0035897"}


id: FYPO:0007706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the removal of tubulin dimers from a microtubule occurs to a lower extent than normal in the lateral part of the cell.","definition_xrefs":["PMID:26443240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased microtubule depolymerization at cell side","synonyms":[{"name":"decreased microtubule catastrophe at cell side","type":"related"},{"name":"decreased microtubule depolymerisation at cell side","type":"exact"},{"name":"decreased microtubule depolymerization at cell side during mitotic cell cycle","type":"related"},{"name":"decreased microtubule depolymerization at cell side during vegetative growth","type":"exact"},{"name":"decreased microtubule depolymerization at lateral part of cell","type":"exact"},{"name":"reduced microtubule depolymerization at cell side","type":"exact"}],"termid":"FYPO:0007706"}


id: PBO:0084049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein; negatively regulates RAS by converting it from the GTP- to the GDP-bound inactive form, required for reducing cAMP levels under nutrient limiting conditions; IRA2 has a paralog, IRA1, that arose from the whole genome duplication; defects in human homolog NF1 are associated with neurofibromatosis","termid":"PBO:0084049"}


id: GO:0002667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction","termid":"GO:0002664"},{"relation_name":"is_a","term_name":"regulation of lymphocyte anergy","termid":"GO:0002911"},{"relation_name":"regulates","term_name":"T cell anergy","termid":"GO:0002870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell anergy","synonyms":[{"name":"regulation of T lymphocyte anergy","type":"exact"},{"name":"regulation of T-cell anergy","type":"exact"},{"name":"regulation of T-lymphocyte anergy","type":"exact"}],"termid":"GO:0002667"}


id: PBO:0036126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation","termid":"PBO:0036126"}


id: FYPO:0007857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of a protein to the spindle midzone is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division. The meiotic spindle midzone is the area in the center of the meiotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PMID:34346498","GO:1903096","GO:1990385","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle during meiosis I","termid":"FYPO:0007750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle midzone during meiosis I","synonyms":[{"name":"normal protein localisation to meiotic spindle midzone during meiosis I","type":"exact"},{"name":"normal protein localization to meiosis I spindle midzone","type":"exact"},{"name":"normal protein localization to spindle midzone during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007857"}


id: PBO:0076273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 1 like","termid":"PBO:0076273"}


id: GO:0005897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-9; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-9 receptor, whereas the beta chain is shared with the receptors for several other interleukins.","definition_xrefs":["GOC:mah","PMID:10642536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-9 receptor complex","synonyms":[{"name":"IL-9 receptor complex","type":"exact"}],"termid":"GO:0005897"}


id: GO:0004249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete stromelysin 3 activity (obsolete GO:0004249)","synonyms":[{"name":"MMP-11","type":"exact"},{"name":"matrix metalloproteinase 11","type":"exact"},{"name":"stromelysin 3 activity","type":"exact"}],"termid":"GO:0004249"}


id: PBO:0090640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, NAD Yea6","termid":"PBO:0090640"}


id: GO:0032175
data:
  {"annotated_genes":["SJAG_01769","SJAG_00663","SJAG_04470","SJAG_03688"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90544,96196,102128,112142],"is_not":false,"summary":null,"term":"GO:0032175"}]},"cv_name":"cellular_component","definition":"A septin ring, i.e. a ring-shaped structure composed of septins and septin-associated proteins, located at the neck of a shmoo (mating projection). The septin ring in the neck of a shmoo may act as a barrier to localize mating factors in the shmoo tip.","definition_xrefs":["GOC:krc","GOC:mah","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01769":null,"SJAG_03688":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mating projection septin ring","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032175","terms_by_termid":{"GO:0032175":null}}


id: PBO:0086578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant exhibits poor growth at elevated pH and calcium","termid":"PBO:0086578"}


id: GO:0004803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transposition of transposable elements or transposons. Transposases are involved in recombination required for transposition and are site-specific for the transposon/transposable element.","definition_xrefs":["GOC:bm","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"transposase activity","secondary_identifiers":["GO:0004804"],"synonyms":[{"name":"P-element encoded transposase activity","type":"narrow"}],"termid":"GO:0004803"}


id: GO:1901726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone deacetylase activity.","definition_xrefs":["GOC:TermGenie","PMID:20497126","GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylase activity (obsolete GO:1901726)","synonyms":[{"name":"down regulation of histone deacetylase activity","type":"exact"},{"name":"down-regulation of histone deacetylase activity","type":"exact"},{"name":"downregulation of histone deacetylase activity","type":"exact"},{"name":"inhibition of histone deacetylase activity","type":"narrow"}],"termid":"GO:1901726"}


id: GO:1900175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry in the lateral mesoderm.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:vk"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900175)","synonyms":[{"name":"regulation of nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1900175"}


id: MOD:01570
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01570"}


id: GO:1901914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"negatively_regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of capsule organization","synonyms":[{"name":"down regulation of capsule organisation","type":"exact"},{"name":"down regulation of capsule organization","type":"exact"},{"name":"down regulation of capsule organization and biogenesis","type":"related"},{"name":"down-regulation of capsule organisation","type":"exact"},{"name":"down-regulation of capsule organization","type":"exact"},{"name":"down-regulation of capsule organization and biogenesis","type":"related"},{"name":"downregulation of capsule organisation","type":"exact"},{"name":"downregulation of capsule organization","type":"exact"},{"name":"downregulation of capsule organization and biogenesis","type":"related"},{"name":"inhibition of capsule organisation","type":"narrow"},{"name":"inhibition of capsule organization","type":"narrow"},{"name":"inhibition of capsule organization and biogenesis","type":"related"},{"name":"negative regulation of capsule organisation","type":"exact"},{"name":"negative regulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901914"}


id: GO:0160155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The autophagic process which involves the direct fusion of abnormal, excess or obsolete secretory granules with lysosomes. This pathway is often associated with maintaining homeostasis in endocrine and exocrine cells.","definition_xrefs":["PMID:29066608","PMID:35452619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"crinophagy","termid":"GO:0160155"}


id: GO:0009181
data:
  {"annotated_genes":["SJAG_02135","SJAG_01310","SJAG_04334","SJAG_02945","SJAG_02796","SJAG_06621","SJAG_03828","SJAG_00633","SJAG_00685","SJAG_04048","SJAG_03852","SJAG_00027","SJAG_00605","SJAG_03903","SJAG_03373","SJAG_00839","SJAG_03660","SJAG_05314","SJAG_02785","SJAG_04192","SJAG_06622","SJAG_02107","SJAG_02009","SJAG_00461","SJAG_04495","SJAG_02369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105535,112532,105534,105066,105071,105536,105530,101946,94351,105065,101581,101582,105070,100587,105531,91062,99760,101947,99498,90571,94071,101580,105069,105532,105533,105068,105067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107732,94267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[74894,72076],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[85246],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine ribonucleoside diphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate catabolic process","termid":"GO:0009137"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate catabolic process","termid":"GO:0009191"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside diphosphate breakdown","type":"exact"},{"name":"purine ribonucleoside diphosphate catabolism","type":"exact"},{"name":"purine ribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009181","terms_by_termid":{"GO:0006096":null,"GO:0006110":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: PATO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that is the extent of space between two entities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distance","termid":"PATO:0000040"}


id: PBO:0085709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in sphingolipid biosynthesis; type II membrane protein; SKN1 has a paralog, KRE6, that arose from the whole genome duplication","termid":"PBO:0085709"}


id: PBO:0017919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, double strand break localizing Dbl7","termid":"PBO:0017919"}


id: GO:0003845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H+.","definition_xrefs":["PMID:15761036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"11-beta-hydroxysteroid dehydrogenase [NAD(P)+] activity","secondary_identifiers":["Wikipedia:11beta-hydroxysteroid_dehydrogenase","Reactome:R-HSA-194023"],"synonyms":[{"name":"11beta-hydroxy steroid dehydrogenase","type":"related"},{"name":"11beta-hydroxysteroid dehydrogenase","type":"related"},{"name":"beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"corticosteroid 11-reductase","type":"related"},{"name":"corticosteroid 11beta-dehydrogenase","type":"related"}],"termid":"GO:0003845"}


id: PBO:0089956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh5","termid":"PBO:0089956"}


id: GO:0043615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an astrocyte, a class of large neuroglial (macroglial) cells in the central nervous system, the largest and most numerous neuroglial cells in the brain and spinal cord.","definition_xrefs":["GOC:go_curators","CL:0000127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte cell migration","synonyms":[{"name":"astrocyte migration","type":"exact"},{"name":"astrocytic glial cell migration","type":"exact"}],"termid":"GO:0043615"}


id: PR:Q9P7K2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.03","synonyms":[{"name":"Spom972h-SPCC24B10.03","type":"exact"}],"termid":"PR:Q9P7K2"}


id: PBO:0070044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear","termid":"PBO:0070044"}


id: PR:P0CT80
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.15c","synonyms":[{"name":"S33 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2802","type":"exact"}],"termid":"PR:P0CT80"}


id: PBO:0090092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, 3'-phosphoadenosine 5'-phosphosulfate/ 5'-adenylyl sulfate Mrx21","termid":"PBO:0090092"}


id: PBO:0039696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apurinic/apyrimidinic endodeoxyribonuclease 2","termid":"PBO:0039696"}


id: PBO:0051824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRF2 divergent transcript","termid":"PBO:0051824"}


id: FYPO:0002829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phytochelatin level","synonyms":[{"name":"decreased cellular cadystin level","type":"exact"},{"name":"decreased cellular phytochelatin level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phytochelatin level during vegetative growth","type":"exact"},{"name":"decreased phytochelatin accumulation","type":"related"},{"name":"reduced cellular phytochelatin level","type":"exact"}],"termid":"FYPO:0002829"}


id: PBO:0058746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6870","termid":"PBO:0058746"}


id: PBO:0014253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insertional Suppressor of Sme2","termid":"PBO:0014253"}


id: FYPO:0003908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of genes that are expressed in response to stress measured in a cell is greater than normal. All stress-responsive genes, or a specific subset of such genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased antisense RNA level","termid":"FYPO:0003557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased stress response gene antisense RNA level","synonyms":[{"name":"increased antisense RNA level at stress response genes","type":"related"},{"name":"increased level of stress response gene antisense transcripts","type":"exact"},{"name":"increased stress response gene antisense RNA accumulation","type":"related"},{"name":"increased stress response gene antisense RNA level during mitotic cell cycle","type":"related"},{"name":"increased stress response gene antisense RNA level during vegetative growth","type":"exact"},{"name":"increased stress response gene antisense transcript level","type":"exact"}],"termid":"FYPO:0003908"}


id: PBO:0017745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1-type Uba5 (predicted)","termid":"PBO:0017745"}


id: PBO:0015217
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by D. melanogaster twine","termid":"PBO:0015217"}


id: PBO:0057384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548az","termid":"PBO:0057384"}


id: GO:0021929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to stellate cells. A cerebellar stellate cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GO_REF:0000021","GOC:dph","PMID:15157725","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stellate cell precursor proliferation","termid":"GO:0021929"}


id: GO:0102947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (+)-delta-cadinene + NADPH + O2 = 8-hydroxy-(+)-delta-cadinene + NADP + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(+)-delta-cadinene-8-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9045"],"termid":"GO:0102947"}


id: GO:0009750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fructose stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fructose","synonyms":[{"name":"response to fructose stimulus","type":"exact"}],"termid":"GO:0009750"}


id: PBO:0049585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 3","termid":"PBO:0049585"}


id: PBO:0057097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 193a","termid":"PBO:0057097"}


id: GO:2001101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltopentaoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentasaccharide transport","termid":"GO:2001100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"maltopentaose transport","termid":"GO:2001101"}


id: PBO:0083839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily-conserved Hsp90 cochaperone; regulates spatial organization of amyloid-like proteins in the cytosol, thereby buffering the proteotoxicity caused by amyloid-like proteins; interacts with the Ssa group of the cytosolic Hsp70 chaperones and activates Ssa1p ATPase activity; interacts with Hsp90 chaperones and inhibits their ATPase activity; homolog of mammalian Hop","termid":"PBO:0083839"}


id: PBO:0062658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 8","termid":"PBO:0062658"}


id: PBO:0040554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7","termid":"PBO:0040554"}


id: PBO:0040313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 7","termid":"PBO:0040313"}


id: GO:2000821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of grooming behavior.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"grooming behavior","termid":"GO:0007625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of grooming behavior","synonyms":[{"name":"regulation of grooming behaviour","type":"exact"}],"termid":"GO:2000821"}


id: PBO:0013107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3B","termid":"PBO:0013107"}


id: GO:0015888
data:
  {"annotated_genes":["SJAG_00835","SJAG_02962","SJAG_04673","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[96769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[86175,86174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of thiamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Thiamine is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"thiamine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiamin transport","type":"exact"},{"name":"vitamin B1 transport","type":"exact"}],"termid":"GO:0015888","terms_by_termid":{"GO:0071934":null,"GO:0140125":null,"GO:1990545":null}}


id: FYPO:0006720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to osmotic stress is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to osmotic stress.","definition_xrefs":["PMID:28924043","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to osmotic stress","synonyms":[{"name":"normal cell cycle delay following osmotic stress","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to osmotic stress","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006720"}


id: GO:0048167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.","definition_xrefs":["GOC:dph","GOC:tb","PMID:11891290","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of synaptic plasticity","termid":"GO:0048167"}


id: PR:O94362
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC428.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GTP-binding protein C428.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.15","synonyms":[{"name":"Spom972h-SPBC428.15","type":"exact"}],"termid":"PR:O94362"}


id: GO:0034470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in the conversion of one or more primary non-coding RNA (ncRNA) transcripts into one or more mature ncRNA molecules.","definition_xrefs":["GOC:mah","PMID:27573892"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA processing (obsolete GO:0034470)","termid":"GO:0034470"}


id: PBO:0087739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Snt2C complex; physically associates with Snt2p and Rpd3p; along with Snt2p, recruits Rpd3p to a small number of promoters; also colocalizes with Snt2p, independently of Rpd3p, to promoters of stress response genes in response to oxidative stress; contains ATP/GTP-binding site motif A; null mutant exhibits increased cellular volume, large drooping buds with elongated necks; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087739"}


id: PBO:0049154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1B","termid":"PBO:0049154"}


id: PR:O59746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.11c gene.","definition_xrefs":["UniProtKB:O59746","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C530.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.11c","synonyms":[{"name":"Spom972h-SPBC530.11c","type":"exact"}],"termid":"PR:O59746"}


id: PBO:0003395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Nop56 (predicted)","termid":"PBO:0003395"}


id: GO:0052064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by a symbiont of the production of reactive oxygen species as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30823485"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated activation of reactive oxygen species production in host cell (obsolete GO:0052064)","synonyms":[{"name":"activation by symbiont of defense-related host ROI production","type":"exact"},{"name":"activation by symbiont of defense-related host ROS production","type":"exact"},{"name":"activation by symbiont of defense-related host metabolic burst","type":"exact"},{"name":"activation by symbiont of defense-related host oxidative burst","type":"exact"},{"name":"activation by symbiont of defense-related host reactive oxidative species production","type":"exact"},{"name":"activation by symbiont of defense-related host reactive oxygen intermediate production","type":"exact"},{"name":"activation by symbiont of defense-related host reactive oxygen species production","type":"exact"},{"name":"activation by symbiont of defense-related host respiratory burst","type":"exact"},{"name":"induction by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of defense-related host AOS production","type":"exact"},{"name":"induction by symbiont of defense-related host active oxygen species production","type":"exact"},{"name":"induction by symbiont of defense-related host metabolic burst","type":"exact"},{"name":"induction by symbiont of defense-related host oxidative burst","type":"exact"},{"name":"induction by symbiont of defense-related host reactive oxidative species production","type":"exact"},{"name":"induction by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"induction by symbiont of defense-related reactive oxygen species production in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"stimulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"up regulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"up-regulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"upregulation by symbiont of defense-related host reactive oxygen species production","type":"related"}],"termid":"GO:0052064"}


id: PBO:0077750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of myb1 membrane trafficking protein","termid":"PBO:0077750"}


id: PBO:0082286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf3p polarization-specific docking factor; required for the polarized distribution of the ADP-ribosylation factor, Arf3p; participates in polarity development and maintenance of a normal haploid budding pattern; interacts with Cnm7p","termid":"PBO:0082286"}


id: PATO:0001049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001049 absolute susceptibility (obsolete PATO:0001049)","termid":"PATO:0001049"}


id: PBO:0113112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongation factor 2 (eEF2, EF-2), also encoded by EFT2; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT1 has a paralog, EFT2, that arose from the whole genome duplication","termid":"PBO:0113112"}


id: FYPO:0000147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of establishment or maintenance of cell polarity","termid":"FYPO:0000191"},{"relation_name":"is_a","term_name":"abnormal regulation of cell growth","termid":"FYPO:0001392"},{"relation_name":"is_a","term_name":"abnormal cell polarity","termid":"FYPO:0005568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005568","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal NETO","synonyms":[{"name":"abnormal NETO during vegetative growth","type":"exact"},{"name":"abnormal cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"abnormal new end take-off","type":"exact"},{"name":"abnormal switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0000147"}


id: PBO:0056334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K14 antisense RNA 1","termid":"PBO:0056334"}


id: FYPO:0006864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to streptonigrin. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to streptonigrin (obsolete FYPO:0006864)","synonyms":[{"name":"cut during cellular response to rufocromomycin","type":"exact"},{"name":"cut during cellular response to streptonigrin during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to streptonigrin during vegetative growth","type":"exact"},{"name":"septation following abnormal chromosome segregation during cellular response to streptonigrin","type":"exact"}],"termid":"FYPO:0006864"}


id: FYECO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cycloheximide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cycloheximide","synonyms":[{"name":"+ CHX","type":"exact"}],"termid":"FYECO:0000257"}


id: PBO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil","termid":"PBO:0000288"}


id: PBO:0091551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane xenobiotic transmembrane transporter Mfs1","termid":"PBO:0091551"}


id: PBO:0064162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group III","termid":"PBO:0064162"}


id: PR:O14026
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase, H3 lysine-36 specific (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.02c","synonyms":[{"name":"SET domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set2","type":"exact"},{"name":"lysine N-methyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14026"}


id: GO:0035376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a sterol into a cell or organelle. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["PMID:19793923","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"sterol import","synonyms":[{"name":"sterol influx","type":"exact"},{"name":"sterol uptake","type":"exact"}],"termid":"GO:0035376"}


id: FYPO:0001267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export does not occur when the cell is subject to a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished nuclear export","termid":"FYPO:0000507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear export during cellular hypotonic salinity response","synonyms":[{"name":"abolished nuclear export during cellular hypotonic salinity response during mitotic cell cycle","type":"related"},{"name":"absent nuclear export during cellular hypotonic salinity response","type":"exact"},{"name":"nuclear export during cellular hypotonic salinity response abolished","type":"exact"},{"name":"nuclear export during cellular hypotonic salinity response abolished during vegetative growth","type":"exact"},{"name":"nuclear export in response to salt starvation abolished","type":"exact"}],"termid":"FYPO:0001267"}


id: PBO:0091364
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule plus-end tracking protein","termid":"PBO:0091364"}


id: GO:0002852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell mediated cytotoxicity directed against a tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated cytotoxicity","termid":"GO:0001914"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immune response to tumor cell","termid":"GO:0002840"},{"relation_name":"regulates","term_name":"T cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002852"}


id: PBO:0047887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(6)(p23)","termid":"PBO:0047887"}


id: GO:0046668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina.","definition_xrefs":["GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"retinal cell programmed cell death","termid":"GO:0046666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal cell programmed cell death","synonyms":[{"name":"regulation of retinal programmed cell death","type":"exact"}],"termid":"GO:0046668"}


id: PBO:0052094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KBTBD11 overlapping transcript 1","termid":"PBO:0052094"}


id: PBO:0071579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 8","termid":"PBO:0071579"}


id: GO:0031215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The precipitation of calcium carbonate onto the organic matrix of a shell, such as a mollusc shell.","definition_xrefs":["GOC:mah","PMID:15132736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shell calcification","termid":"GO:0031215"}


id: PBO:0071715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 13","termid":"PBO:0071715"}


id: PATO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's loss of myelin sheath.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/demyelinated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"demyelinated","termid":"PATO:0002218"}


id: PBO:0030583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_threonine_level","termid":"PBO:0030583"}


id: GO:1905928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of invadopodium disassembly.","definition_xrefs":["PMID:15684033","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invadopodium disassembly (obsolete GO:1905928)","synonyms":[{"name":"down regulation of invadopodium disassembly","type":"exact"},{"name":"down-regulation of invadopodium disassembly","type":"exact"},{"name":"downregulation of invadopodium disassembly","type":"exact"},{"name":"inhibition of invadopodium disassembly","type":"narrow"}],"termid":"GO:1905928"}


id: GO:0007479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the proximal/distal axis of the leg imaginal disc, a precursor to the adult leg.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation, imaginal disc","termid":"GO:0007449"},{"relation_name":"is_a","term_name":"leg disc pattern formation","termid":"GO:0035223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leg disc proximal/distal pattern formation","termid":"GO:0007479"}


id: FYPO:0001960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase II activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal DNA topoisomerase II activity","synonyms":[{"name":"abnormal DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","type":"exact"}],"termid":"FYPO:0001960"}


id: PBO:0057118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 203a","termid":"PBO:0057118"}


id: PBO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Cut7","termid":"PBO:0002461"}


id: GO:0015745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which tartrate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"aldarate transmembrane transport","termid":"GO:0042869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"tartrate transmembrane transport","synonyms":[{"name":"tartrate transport","type":"related"}],"termid":"GO:0015745"}


id: PBO:0084332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-like myosin passenger-protein; interacts with Myo2p and enhances its interaction with Sec4p during transport of secretory vesicles; controls actin cable structure and dynamics","termid":"PBO:0084332"}


id: GO:0034519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex found in the cytoplasm that binds the 5' cap structure of an mRNA, and typically consists of the cap-binding protein eIF4E, the adaptor protein eIF4G, and a multi-factor complex comprising eIF1, eIF2, eIF3 and eIF5. This complex mediates recruitment of the 40S subunit to mRNA.","definition_xrefs":["PMID:16405910"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic RNA cap binding complex (obsolete GO:0034519)","termid":"GO:0034519"}


id: PBO:0030936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_linear_element","termid":"PBO:0030936"}


id: MOD:01271
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:15549660","Unimod:271#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site Y","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01271"}


id: PR:Q09870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA 3'-terminal phosphate cyclase-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00128","PANTHER:PTHR11096:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 3'-terminal phosphate cyclase-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.06c","secondary_identifiers":["UniProtKB:Q09870"],"synonyms":[{"name":"Spom972h-RCL1","type":"exact"}],"termid":"PR:Q09870"}


id: PBO:0052042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kidney associated DCDC2 antisense RNA 1","termid":"PBO:0052042"}


id: GO:0140293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (ADP-D-ribosyl)-L-glutamyl-[protein] + H2O = L-glutamyl-[protein] + ADP-ribose.","definition_xrefs":["PMID:23481255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0140096","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ADP-ribosylglutamate hydrolase activity","termid":"GO:0140293"}


id: GO:0044536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with a reduction in the quantity of fibrinogen found in the bloodstream of the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in impairment of hemostasis in another organism","termid":"GO:0044483"},{"relation_name":"is_a","term_name":"negative regulation of circulating fibrinogen levels","termid":"GO:0061754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in depletion of circulating fibrinogen in another organism","synonyms":[{"name":"envenomation resulting in depletion of circulating fibrinogen in other organism","type":"exact"},{"name":"envenomation resulting in negative regulation of circulating fibrinogen in other organism","type":"exact"}],"termid":"GO:0044536"}


id: PBO:0054903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2317","termid":"PBO:0054903"}


id: PBO:0045606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 17 (pseudogene)","termid":"PBO:0045606"}


id: PBO:0059602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 14","termid":"PBO:0059602"}


id: PBO:0002094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb1 (predicted)","termid":"PBO:0002094"}


id: GO:0015543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glucose or lactose(in) = glucose or lactose(out).","definition_xrefs":["TC:2.A.1.20.2"],"gene_count":0,"genotype_count":0,"name":"obsolete lactose/glucose efflux transporter activity (obsolete GO:0015543)","synonyms":[{"name":"lactose/glucose efflux transporter activity","type":"exact"}],"termid":"GO:0015543"}


id: PBO:0031513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_molecular_function","termid":"PBO:0031513"}


id: GO:0021622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the oculomotor nerve is generated and organized. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"oculomotor nerve development","termid":"GO:0021557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve morphogenesis","synonyms":[{"name":"CN III morphogenesis","type":"related"}],"termid":"GO:0021622"}


id: PATO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A degree of pigmentation quality that is relative high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pigmented","termid":"PATO:0002248"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased pigmentation","synonyms":[{"name":"hyperpigmented","type":"exact"}],"termid":"PATO:0002250"}


id: GO:0043598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic complex of two polypeptides that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase. Examples of this component are found in prokaryotic species.","definition_xrefs":["PMID:14646196","GOC:mtg_sensu","PMID:16172520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication factor C complex","termid":"GO:0005663"},{"relation_name":"part_of","term_name":"cytoplasmic replisome","termid":"GO:0043600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005737","GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic DNA replication factor C complex","synonyms":[{"name":"cytoplasmic RFC","type":"exact"},{"name":"cytoplasmic clamp loader","type":"exact"}],"termid":"GO:0043598"}


id: GO:1901479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of benomyl from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete benomyl transmembrane transporter activity (obsolete GO:1901479)","synonyms":[{"name":"benomyl transporter activity","type":"related"}],"termid":"GO:1901479"}


id: GO:0000196
data:
  {"annotated_genes":["SJAG_04551","SJAG_04522","SJAG_00610","SJAG_01114","SJAG_02392","SJAG_01787","SJAG_05000","SJAG_03753","SJAG_04825","SJAG_00424","SJAG_01181","SJAG_04666","SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88287,98243,107127],"is_not":false,"summary":null,"term":"GO:0000196"},{"annotations":[95529,103176,99925,103748,91908,114497],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903138"},{"annotations":[88442,85469,98954,86800],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903139"}]},"cv_name":"biological_process","definition":"A MAPK cascade that specifically ensures the maintenance and regulation of cellular structure in response to external signals, including plasma membrane stretching or cell wall alteration, to coordinate cellular responses such as growth, differentiation, and stress adaptation, thereby preserving cell integrity. Contains the  SLT2 (S.cerevisiae)/Pmk1 (S.pombe) MAP kinase or orthologs.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress-activated MAPK cascade","termid":"GO:0051403"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01114":null,"SJAG_01181":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_03753":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CWI pathway","type":"related"},{"name":"Mpk1 cascade","type":"narrow"},{"name":"PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"Slt2 cascade","type":"narrow"},{"name":"cell integrity MAPK pathway","type":"exact"},{"name":"cell wall integrity MAPK cascade","type":"narrow"}],"termid":"GO:0000196","terms_by_termid":{"GO:0000196":null,"GO:1903138":null,"GO:1903139":null}}


id: PBO:0113046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin segregase involved in DNA replication; ATPase activity, stimulated by S phase CDK-dependent phosphorylation, is coupled to nucleosome disassembly, promoting DNA replication; regulates cell-cycle-dependent histone gene expression; contains AAA+-ATPase domains and a non-canonical bromodomain; hexameric; relocalizes to the cytosol in response to hypoxia; human ortholog ATAD2 is a coregulator of oncogenic transcription factors and an oncogene overexpressed in cancers with poor prognosis","termid":"PBO:0113046"}


id: PBO:0076955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 3","termid":"PBO:0076955"}


id: GO:0032014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ARF protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ARF protein signal transduction","termid":"GO:0032012"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"ARF protein signal transduction","termid":"GO:0032011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ARF protein signal transduction","synonyms":[{"name":"activation of ARF protein signal transduction","type":"narrow"},{"name":"stimulation of ARF protein signal transduction","type":"narrow"},{"name":"up regulation of ARF protein signal transduction","type":"exact"},{"name":"up-regulation of ARF protein signal transduction","type":"exact"},{"name":"upregulation of ARF protein signal transduction","type":"exact"}],"termid":"GO:0032014"}


id: PBO:0113129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eukaryotic translation elongation factor 2 (eEF2, EF-2); also encoded by EFT1; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT2 has a paralog, EFT1, that arose from the whole genome duplication","termid":"PBO:0113129"}


id: PBO:0056552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 2","termid":"PBO:0056552"}


id: GO:0008743
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine + NAD+ = L-2-amino-3-oxobutanoate + CO2 + NADH.","definition_xrefs":["EC:1.1.1.103","RHEA:13161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-threonine 3-dehydrogenase activity","secondary_identifiers":["MetaCyc:THREODEHYD-RXN","Reactome:R-HSA-6798667","KEGG_REACTION:R01465"],"synonyms":[{"name":"L-threonine dehydrogenase activity","type":"related"},{"name":"L-threonine:NAD+ oxidoreductase activity","type":"related"},{"name":"threonine 3-dehydrogenase activity","type":"broad"},{"name":"threonine dehydrogenase activity","type":"related"}],"termid":"GO:0008743"}


id: PBO:0111794
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin","termid":"PBO:0111794"}


id: PBO:0029179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_stress_responsive_gene_mRNA_during_vegetative_growth","termid":"PBO:0029179"}


id: GO:0051899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential decreases with respect to its steady-state potential, usually from negative potential to a more positive potential. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative steady-state resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["Wikipedia:Depolarization","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization","termid":"GO:0051899"}


id: PBO:0035708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_during_vegetative_growth","termid":"PBO:0035708"}


id: GO:0098784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a biofilm matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biofilm matrix organization","synonyms":[{"name":"biofilm matrix organization and biogenesis","type":"related"}],"termid":"GO:0098784"}


id: PBO:0113459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of structure-specific Mms4p-Mus81p endonuclease; cleaves branched DNA and DNA-protein cross-links; involved in DNA repair, replication fork stability, and joint molecule formation/resolution during meiotic recombination; promotes template switching during break-induced replication (BIR), causing non-reciprocal translocations (NRTs); helix-hairpin-helix protein; phosphorylation of non-catalytic subunit Mms4p by Cdc28p and Cdc5p during mitotic cell cycle activates function of Mms4p-Mus81p","termid":"PBO:0113459"}


id: GO:0051573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K9 methylation (obsolete GO:0051573)","synonyms":[{"name":"down regulation of histone H3-K9 methylation","type":"exact"},{"name":"down-regulation of histone H3-K9 methylation","type":"exact"},{"name":"downregulation of histone H3-K9 methylation","type":"exact"},{"name":"inhibition of histone H3-K9 methylation","type":"narrow"}],"termid":"GO:0051573"}


id: PBO:0074724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 80D","termid":"PBO:0074724"}


id: GO:0009500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dicluster bacterial-type ferredoxin (obsolete GO:0009500)","synonyms":[{"name":"dicluster bacterial-type ferredoxin","type":"exact"}],"termid":"GO:0009500"}


id: PBO:0091886
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/KM 2.3x10^4 min-1 M-1","termid":"PBO:0091886"}


id: PBO:0067861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 163","termid":"PBO:0067861"}


id: GO:1902147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cytokinesis checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to cell cycle checkpoint signaling","termid":"GO:1902145"},{"relation_name":"regulates","term_name":"response to cytokinesis checkpoint signaling","termid":"GO:0072399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cytokinesis checkpoint signaling","secondary_identifiers":["GO:1902149"],"synonyms":[{"name":"regulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in cytokinesis checkpoint","type":"exact"}],"termid":"GO:1902147"}


id: PBO:0074807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13 pseudogene 2","termid":"PBO:0074807"}


id: MOD:00017
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to a glycine.","definition_xrefs":["PubMed:1310545","PubMed:6692818","DeltaMass:0","RESID:AA0008","ChEBI:29947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine residue","synonyms":[{"name":"Gly","type":"exact"},{"name":"aminoacetic acid","type":"exact"},{"name":"aminoethanoic acid","type":"exact"},{"name":"azanylethanoic acid","type":"exact"},{"name":"glycine","type":"exact"},{"name":"glycocoll","type":"exact"}],"termid":"MOD:00017"}


id: GO:0005274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: allantoin(out) + H+(out) = allantoin(in) + H+(in) by secondary active transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","TC:2.A.39.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"allantoin:proton symporter activity","secondary_identifiers":["GO:0015206"],"synonyms":[{"name":"allantoin permease activity","type":"related"},{"name":"allantoin uptake transmembrane transporter activity","type":"narrow"},{"name":"allantoin/allantoate transporter","type":"broad"}],"termid":"GO:0005274"}


id: PATO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed laterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral orientation","synonyms":[{"name":"laterally directed","type":"exact"}],"termid":"PATO:0002497"}


id: PBO:0067664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 842, pseudogene","termid":"PBO:0067664"}


id: GO:0051947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"regulation of GABA reuptake","type":"exact"},{"name":"regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051947"}


id: PBO:0086392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative component of the protein phosphatase type 2A complex","termid":"PBO:0086392"}


id: PBO:0069101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 348, pseudogene","termid":"PBO:0069101"}


id: GO:0052601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: limonene + NAD(P)H + H+ + O2 = NAD(P)+ + H2O + limonene-1,2-epoxide. Can use either (4S)-limonene or (4R)-limonene as substrate. NADPH can act instead of NADH, although more slowly.","definition_xrefs":["EC:1.14.13.107","PMID:8820855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"},{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"limonene 1,2-monooxygenase activity","synonyms":[{"name":"(-)-limonene 1,2-monooxygenase activity","type":"related"},{"name":"(-)-limonene,NAD(P)H:oxygen oxidoreductase activity","type":"related"},{"name":"(S)-limonene 1,2-monooxygenase activity","type":"narrow"},{"name":"(S)-limonene,NAD(P)H:oxygen oxidoreductase activity","type":"exact"}],"termid":"GO:0052601"}


id: PATO:0000445
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000445 relative percentage value (obsolete PATO:0000445)","termid":"PATO:0000445"}


id: PBO:0002171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Spc34","termid":"PBO:0002171"}


id: PBO:0065569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin I2 synthase","termid":"PBO:0065569"}


id: PBO:0004692
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.25","termid":"PBO:0004692"}


id: PBO:0079632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 2","termid":"PBO:0079632"}


id: GO:0018047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-phenylalanine amide by hydrolysis and oxidation of an interior Phe-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0094"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-phenylalanine amidation (obsolete GO:0018047)","termid":"GO:0018047"}


id: PBO:0055133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2552","termid":"PBO:0055133"}


id: PBO:0087662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the import motor (PAM complex); the PAM complex is a  component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); essential J-protein cochaperone that stimulates Ssc1p ATPase activity to drive import; inhibited by Pam16p","termid":"PBO:0087662"}


id: GO:1990194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a cytoplasmic U snRNP body.","definition_xrefs":["PMID:19464282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"cytoplasmic U snRNP body assembly","synonyms":[{"name":"U body assembly","type":"related"}],"termid":"GO:1990194"}


id: PBO:0030298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_interphase_cytoplasmic_microtubules","termid":"PBO:0030298"}


id: GO:0072707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium dodecyl sulfate (SDS) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sodium dodecyl sulfate","termid":"GO:0072706"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium dodecyl sulfate","synonyms":[{"name":"cellular response to SDS","type":"exact"}],"termid":"GO:0072707"}


id: PBO:0050569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"harakiri, BCL2 interacting protein","termid":"PBO:0050569"}


id: GO:0080108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.","definition_xrefs":["PMID:14871316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"S-alkylthiohydroximate lyase activity","synonyms":[{"name":"S-alkylthiohydroximate C-S lyase activity","type":"narrow"}],"termid":"GO:0080108"}


id: PBO:0051409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-41 (pseudogene)","termid":"PBO:0051409"}


id: PBO:0064946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEAK1 related, kinase-activating pseudokinase 1","termid":"PBO:0064946"}


id: PBO:0053592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 619","termid":"PBO:0053592"}


id: PBO:0087174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B16; forms dissociable heterodimer with Rpb4p; Rpb4/7 dissociates from RNAPII as Ser2 CTD phosphorylation increases; Rpb4/7 regulates cellular lifespan via mRNA decay process; involved in recruitment of 3'-end processing factors to transcribing RNA polymerase II complex, export of mRNA to cytoplasm under stress conditions; also involved in translation initiation","termid":"PBO:0087174"}


id: GO:1905919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CoA-transferase activity.","definition_xrefs":["GO_REF:0000059","GOC:aruk","GOC:bc","GOC:TermGenie","PMID:20164328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of CoA-transferase activity","termid":"GO:1905918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CoA-transferase activity","synonyms":[{"name":"down regulation of CoA-transferase activity","type":"exact"},{"name":"down-regulation of CoA-transferase activity","type":"exact"},{"name":"downregulation of CoA-transferase activity","type":"exact"},{"name":"inhibition of CoA-transferase activity","type":"narrow"}],"termid":"GO:1905919"}


id: FYPO:0005245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing arabinose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"increased cell population growth on arabinose carbon source","synonyms":[{"name":"increased growth on arabinose carbon source","type":"broad"},{"name":"increased vegetative cell growth on arabinose carbon source","type":"exact"}],"termid":"FYPO:0005245"}


id: PBO:0066902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 203","termid":"PBO:0066902"}


id: PBO:0088832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate (Pi) transmembrane transporter Plt1","termid":"PBO:0088832"}


id: FYPO:0006539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more than one septum during a cellular response to a pheromone.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"multiseptate cell during cellular response to pheromone","termid":"FYPO:0006539"}


id: GO:0072727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a CCCP stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to CCCP (obsolete GO:0072727)","synonyms":[{"name":"cellular response to carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"}],"termid":"GO:0072727"}


id: PATO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000913 qualitative value (obsolete PATO:0000913)","termid":"PATO:0000913"}


id: PBO:0070270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 4","termid":"PBO:0070270"}


id: PATO:0000553
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000553 relative temperature sensitivity value (obsolete PATO:0000553)","termid":"PATO:0000553"}


id: PBO:0059690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 56","termid":"PBO:0059690"}


id: GO:0015774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of polysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transport","termid":"GO:0008643"},{"relation_name":"part_of","term_name":"polysaccharide localization","termid":"GO:0033037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"polysaccharide transport","termid":"GO:0015774"}


id: FYPO:0005079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:21151114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin at centromere central core","synonyms":[{"name":"normal protein localisation to chromatin at centromere central core","type":"exact"},{"name":"normal protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric central core","type":"exact"}],"termid":"FYPO:0005079"}


id: PBO:0017946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam8","termid":"PBO:0017946"}


id: GO:1902783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a decane stimulus.","definition_xrefs":["PMID:23826995","GO_REF:0000071","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to decane","termid":"GO:1902782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to decane","termid":"GO:1902783"}


id: PBO:0056215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B17","termid":"PBO:0056215"}


id: PBO:0078673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 6-1","termid":"PBO:0078673"}


id: PBO:0052395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member C1","termid":"PBO:0052395"}


id: PBO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type (predicted)","termid":"PBO:0000604"}


id: PBO:0089733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6","termid":"PBO:0089733"}


id: GO:0033118
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an esterosome. This membrane has characteristics of rough endoplasmic reticulum (RER) membranes.","definition_xrefs":["GOC:ecd","PMID:2307702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"esterosome","termid":"GO:0033117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"esterosome membrane","termid":"GO:0033118"}


id: PATO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The frequency of transmitted vibrations.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sound frequency","termid":"PATO:0001520"}


id: PBO:0036399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfhydryl oxidase Erv2 (predicted)","termid":"PBO:0036399"}


id: PBO:0069562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 834, pseudogene","termid":"PBO:0069562"}


id: GO:0102212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-4-deoxy-Delta(4)-GlcpA-(1->3)-beta-D-GalpNAc6S + H2O = 5-dehydro-4-deoxy-D-glucuronate + N-acetyl-beta-D-galactosamine 6-sulfate.","definition_xrefs":["GOC:pz","EC:3.2.1.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"unsaturated chondroitin disaccharide hydrolase activity","secondary_identifiers":["RHEA:31647","MetaCyc:RXN-12177"],"termid":"GO:0102212"}


id: GO:0034250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"positively_regulates","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amide metabolic process","synonyms":[{"name":"positive regulation of amide metabolism","type":"exact"},{"name":"positive regulation of cellular amide metabolic process","type":"exact"}],"termid":"GO:0034250"}


id: PBO:0074195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 5","termid":"PBO:0074195"}


id: PBO:0083124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichyl-phosphoglucose-dependent alpha-1,2-glucosyltransferase; located in the ER; functions in pathway that synthesizes the dolichol-linked oligosaccharide precursor for N-linked protein glycosylation; has a role in regulation of ITR1 and INO1; human homolog ALG10B can complement yeast die2 null mutant","termid":"PBO:0083124"}


id: GO:0018985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and ordering of the envelope of pronuclei.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear envelope organization","termid":"GO:0006998"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"pronuclear envelope synthesis","termid":"GO:0018985"}


id: PBO:0081596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 2","termid":"PBO:0081596"}


id: GO:0042840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-glucuronate, the D-enantiomer of glucuronate.","definition_xrefs":["GOC:jl","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate catabolic process","termid":"GO:0006064"},{"relation_name":"is_a","term_name":"D-glucuronate metabolic process","termid":"GO:0042839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"D-glucuronate catabolic process","synonyms":[{"name":"D-glucuronate breakdown","type":"exact"},{"name":"D-glucuronate catabolism","type":"exact"},{"name":"D-glucuronate degradation","type":"exact"}],"termid":"GO:0042840"}


id: PBO:0082480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carboxyl methyltransferase; methylates the C terminus of the protein phosphatase 2A catalytic subunit (Pph21p or Pph22p), which is important for complex formation with regulatory subunits; required for methionine to inhibit autophagy and promote growth","termid":"PBO:0082480"}


id: GO:0036186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an early phagosome.","definition_xrefs":["GOC:phg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic vesicle membrane","termid":"GO:0030670"},{"relation_name":"part_of","term_name":"early phagosome","termid":"GO:0032009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"early phagosome membrane","synonyms":[{"name":"early phagocytic vesicle membrane","type":"exact"}],"termid":"GO:0036186"}


id: PBO:0059621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 2","termid":"PBO:0059621"}


id: PATO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000013 relative age (obsolete PATO:0000013)","termid":"PATO:0000013"}


id: PBO:0067003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 7, pseudogene","termid":"PBO:0067003"}


id: PBO:0028731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylselenocysteine_level_during_vegetative_growth","termid":"PBO:0028731"}


id: PBO:0088830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex Armadillo-type fold Rix1","termid":"PBO:0088830"}


id: FYPO:0003496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which azetidine-2-carboxylic acid acetyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal azetidine-2-carboxylic acid acetyltransferase activity","termid":"FYPO:0003495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abolished azetidine-2-carboxylic acid acetyltransferase activity","synonyms":[{"name":"azetidine-2-carboxylic acid acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0003496"}


id: GO:0052205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the function of proteins in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of molecular function in other organism involved in symbiotic interaction (obsolete GO:0052205)","synonyms":[{"name":"modification of molecular function in other organism during symbiotic interaction","type":"exact"},{"name":"modification of protein function in other organism during symbiotic interaction","type":"exact"},{"name":"modulation of molecular function in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052205"}


id: GO:0071642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of macrophage inflammatory protein 1 alpha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of macrophage inflammatory protein 1 alpha production","termid":"GO:0071640"},{"relation_name":"positively_regulates","term_name":"macrophage inflammatory protein-1 alpha production","termid":"GO:0071608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of macrophage inflammatory protein 1 alpha production","synonyms":[{"name":"positive regulation of CCL3 production","type":"exact"},{"name":"positive regulation of MIP-1a production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"positive regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071642"}


id: GO:0034439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipoprotein by oxidation of the lipid group.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"},{"relation_name":"is_a","term_name":"lipoprotein oxidation","termid":"GO:0042161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipoprotein lipid oxidation","termid":"GO:0034439"}


id: GO:0051056
data:
  {"annotated_genes":["SJAG_03592","SJAG_06270","SJAG_01805","SJAG_00526","SJAG_02514","SJAG_04462","SJAG_00883","SJAG_04455","SJAG_03681","SJAG_02379","SJAG_00329","SJAG_03936","SJAG_03488","SJAG_03048","SJAG_04776","SJAG_01790","SJAG_01464","SJAG_00229","SJAG_00082","SJAG_03353","SJAG_00078","SJAG_04943","SJAG_00600","SJAG_02169","SJAG_01386","SJAG_04329","SJAG_03631","SJAG_03508"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[101467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[103677,101157,103228,89495,97366,86758,95677,95757,88958,88872,106316,103367,87754,91698,112079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[87185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046579"},{"annotations":[106670,89850,86035,83575,98488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[69156,112683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032483"},{"annotations":[85995,100623,109530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031029"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00329":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03488":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04329":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of small GTPase mediated signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of small GTPase-mediated signal transduction","type":"exact"}],"termid":"GO:0051056","terms_by_termid":{"GO:0031029":null,"GO:0031030":null,"GO:0031031":null,"GO:0032483":null,"GO:0035024":null,"GO:0046579":null,"GO:0046580":null}}


id: GO:0140113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and secretion of a set of components to form an extracellular microvesicule, a membrane-bounded vesicle that ranges in size 100 nm to 1 micron in size) and exits the cell by budding.","definition_xrefs":["PMID:28736435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle biogenesis","termid":"GO:0140112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"extracellular microvesicle biogenesis","synonyms":[{"name":"extracellular microvesicle assembly","type":"related"}],"termid":"GO:0140113"}


id: PBO:0052894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-5","termid":"PBO:0052894"}


id: FYPO:0000215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which intracellular protein transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport during vegetative growth","termid":"FYPO:0000540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal intracellular protein transport during vegetative growth","synonyms":[{"name":"abnormal intracellular protein transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000215"}


id: FYPO:0007471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of heterochromatin organization is abnormal during G0 phase. Heterochromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin, a compact and highly condensed form of chromatin.","definition_xrefs":["PomBase:mah","GO:0070828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during G0","termid":"FYPO:0003871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal heterochromatin organization during G0","synonyms":[{"name":"abnormal heterochromatin organisation during G0","type":"exact"},{"name":"abnormal heterochromatin organization during cell quiescence","type":"exact"},{"name":"abnormal heterochromatin organization during quiescence","type":"exact"}],"termid":"FYPO:0007471"}


id: GO:0006217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxycytidine, 2-deoxyribosylcytosine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxycytidine metabolic process","termid":"GO:0046092"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside catabolic process","termid":"GO:0046127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxycytidine catabolic process","synonyms":[{"name":"deoxycytidine breakdown","type":"exact"},{"name":"deoxycytidine catabolism","type":"exact"},{"name":"deoxycytidine degradation","type":"exact"}],"termid":"GO:0006217"}


id: MOD:00546
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two (18)O atom for the two (16)O atoms of an alpha-carboxyl (1-carboxyl) group.","definition_xrefs":["OMSSA:88","PubMed:11467524","Unimod:193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O disubstituted residue","termid":"MOD:00847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O label at both C-terminal oxygens","synonyms":[{"name":"Label:18O(2)","type":"related"},{"name":"O18 label at both C-terminal oxygens","type":"related"},{"name":"ctermpepdio18","type":"exact"}],"termid":"MOD:00546"}


id: GO:0043849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + protein-cysteine = S-palmitoyl protein + CoA, specific for Ras proteins.","definition_xrefs":["PMID:16000296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-palmitoyltransferase activity","termid":"GO:0019706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"Ras palmitoyltransferase activity","synonyms":[{"name":"DHHC cysteine-rich domain-containing protein ERF2","type":"related"},{"name":"ERF2","type":"related"},{"name":"Ras protein acyltransferase activity","type":"exact"},{"name":"palmitoyltransferase ERF2","type":"related"}],"termid":"GO:0043849"}


id: PBO:0064247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLD5 pseudogene 1","termid":"PBO:0064247"}


id: PBO:0018082
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutants lacking primase activity fail to complement S. cerevisiae MCM10 deletion","termid":"PBO:0018082"}


id: PBO:0063538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudopodium enriched atypical kinase 1","termid":"PBO:0063538"}


id: GO:0044205
data:
  {"annotated_genes":["SJAG_00694","SJAG_00197","SJAG_03164","SJAG_00964","SJAG_00444"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85483,89453,94579,108072,112906],"is_not":false,"summary":null,"term":"GO:0044205"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD+ or oxygen.","definition_xrefs":["GOC:jl","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP biosynthetic process","termid":"GO:0006222"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"'de novo' UMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"'de novo' UMP biosynthesis","type":"exact"}],"termid":"GO:0044205","terms_by_termid":{"GO:0044205":null}}


id: GO:0042463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of photoreceptors, sensory cells that react to the presence of light, found in the ocellus.","definition_xrefs":["ISBN:0192800981","GOC:jl","PMID:11542766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell development","termid":"GO:0042461"},{"relation_name":"part_of","term_name":"ocellus photoreceptor cell differentiation","termid":"GO:0042705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus photoreceptor cell development","secondary_identifiers":["GO:0001749"],"synonyms":[{"name":"non-eye photoreceptor development","type":"broad"}],"termid":"GO:0042463"}


id: PBO:0077459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 184B","termid":"PBO:0077459"}


id: GO:0015818
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106166,98910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"}]},"cv_name":"biological_process","definition":"The directed movement of isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid transport","termid":"GO:0015803"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"isoleucine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine transport","type":"narrow"}],"termid":"GO:0015818","terms_by_termid":{"GO:1903714":null}}


id: GO:0006297
data:
  {"annotated_genes":["SJAG_02818","SJAG_00814","SJAG_02527","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101054,103485,105254,110061],"is_not":false,"summary":null,"term":"GO:0006297"}]},"cv_name":"biological_process","definition":"Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00814":null,"SJAG_02527":null,"SJAG_02818":null,"SJAG_02908":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA gap filling","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006297","terms_by_termid":{"GO:0006297":null}}


id: PBO:0031267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_autophagy","termid":"PBO:0031267"}


id: PATO:0002191
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that inheres in a molecular entity when it possesses at least one ring that is aromatic, i.e. A conjugated ring of unsaturated bonds, lone pairs, or empty orbitals that exhibit a stabilization stronger than would be expected by the stabilization of conjugation alone.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromaticity","termid":"PATO:0002190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic","termid":"PATO:0002191"}


id: PBO:0052845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-1","termid":"PBO:0052845"}


id: PBO:0084574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein of unknown function; overexpression suppresses NaCl sensitivity of sro7 mutant cells by restoring sodium pump (Ena1p) localization to the plasma membrane","termid":"PBO:0084574"}


id: PBO:0073254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 6","termid":"PBO:0073254"}


id: PBO:0113084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ankyrin repeat-containing protein; co-purifies with Myo3p and Myo5p by large-scale affinity capture; localization of the long-tailed type I myosins is altered in the null mutant; N-terminally propionylated in vivo; contains three ankyrin repeats and an acidic tail; orthologous to human OSTF1","termid":"PBO:0113084"}


id: PBO:0080603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 37","termid":"PBO:0080603"}


id: GO:0044512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of glucagon-like peptide receptor 1 activity in of the bitten organism.","definition_xrefs":["PMID:8405712","GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of receptor activity in another organism","termid":"GO:0044511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of glucagon-like peptide receptor 1 activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of glucagon-like peptide receptor 1 activity in other organism","type":"exact"}],"termid":"GO:0044512"}


id: GO:0044606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein-serine-choline phosphate + H2O = protein-serine + choline phosphate.","definition_xrefs":["GOC:sp","PMID:22158903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphocholine hydrolase activity","termid":"GO:0044606"}


id: PBO:0055047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2462","termid":"PBO:0055047"}


id: PBO:0027961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_polymerase_II_core_promoter_proximal_region_sequence-specific_DNA_binding","termid":"PBO:0027961"}


id: PBO:0064370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 2 pseudogene 2","termid":"PBO:0064370"}


id: GO:2000668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendritic cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"regulates","term_name":"dendritic cell apoptotic process","termid":"GO:0097048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic cell apoptotic process","synonyms":[{"name":"regulation of dendritic cell apoptosis","type":"narrow"}],"termid":"GO:2000668"}


id: GO:0103028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a peptidoglycan dimer (generic) = a lipid II + GlcNAc-1,6-anhydro-MurNAc-pentapeptide.","definition_xrefs":["EC:4.2.2.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"murein hydrolase activity","secondary_identifiers":["MetaCyc:RXN0-5190"],"termid":"GO:0103028"}


id: GO:0007034
data:
  {"annotated_genes":["SJAG_02912","SJAG_01324","SJAG_03137","SJAG_01586","SJAG_03385","SJAG_03783","SJAG_01527","SJAG_01488","SJAG_02117","SJAG_01445","SJAG_01242","SJAG_00301","SJAG_01367","SJAG_01360","SJAG_03848","SJAG_01645","SJAG_00777","SJAG_01598","SJAG_01088","SJAG_03072","SJAG_03756","SJAG_00380","SJAG_02049","SJAG_04966","SJAG_16459","SJAG_00181","SJAG_03347","SJAG_03005","SJAG_01876","SJAG_07012","SJAG_05207","SJAG_02240","SJAG_01913","SJAG_02349","SJAG_03976","SJAG_04912","SJAG_03442","SJAG_00916","SJAG_01809","SJAG_02453","SJAG_03511","SJAG_00416","SJAG_01981","SJAG_04024","SJAG_04931","SJAG_02587","SJAG_02811","SJAG_01229","SJAG_04489","SJAG_04936","SJAG_05210","SJAG_00204","SJAG_00299","SJAG_03403","SJAG_00821","SJAG_00208","SJAG_04023","SJAG_03726","SJAG_05245","SJAG_02315","SJAG_01281","SJAG_04902","SJAG_02234","SJAG_04047","SJAG_02584","SJAG_01080","SJAG_04349","SJAG_04822","SJAG_04643","SJAG_00900","SJAG_03892","SJAG_04552","SJAG_03250","SJAG_03963","SJAG_05303","SJAG_03970","SJAG_04070","SJAG_00108"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71001,85138,86192,98067,110680],"is_not":false,"summary":null,"term":"GO:0007034"},{"annotations":[84121,87093,101878,87659,84159,84044,87524,109473,110613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[93219,113736,92192,97539,92948,96000,100187,104821,91842,115070,105317,95599,107654,104935,88310,86605,90233,103504,105946,84940,106410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006896"},{"annotations":[102863,94034,97210,83990,103765,98230,102680,100167,98078,86209,96981,106785,87660,114613,105131,92613,105949,96343,84161,96401,107620,92021,88023,101093,105934,101835,87526,113085,88651,107038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045324"},{"annotations":[84646,94771,87661,99851,94949,106355,111043,100246,103260,108730,99256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[87029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[86210,97212,100188,84941,88141,93471,100169,102865,98233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[103505,94036,87662,107621,110875,86584,112572,83992,105515,87527,96983,92023,101094,84162,88024,88311,105935,106786,102682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances into, out of or within a vacuole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":78,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00777":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_00916":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01324":null,"SJAG_01360":null,"SJAG_01367":null,"SJAG_01445":null,"SJAG_01488":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_01876":null,"SJAG_01913":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02315":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02584":null,"SJAG_02587":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03385":null,"SJAG_03403":null,"SJAG_03442":null,"SJAG_03511":null,"SJAG_03726":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03848":null,"SJAG_03892":null,"SJAG_03963":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_04912":null,"SJAG_04931":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05303":null,"SJAG_07012":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"vacuolar transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0007034","terms_by_termid":{"GO:0006623":null,"GO:0006896":null,"GO:0007034":null,"GO:0032511":null,"GO:0043328":null,"GO:0044395":null,"GO:0045324":null,"GO:0120113":null}}


id: PBO:0054813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2226","termid":"PBO:0054813"}


id: GO:0097007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (EE)-geranyllinalool + NADPH + O2 = 4,8,12-trimethyl-1,3,7,11-tridecatetraene + NADP+ + 2 H2O. It is unknown whether this reaction proceeds by the direct release of the 4-carbon compound but-1-en-3-one, or whether the substrate is first degraded to C18-farnesylacetone and then cleaved to produce 4,8,12-trimethyl-1,3,7,11-tridecatetraene (TMTT) and acetone.","definition_xrefs":["MetaCyc:RXN-8620","PMID:21088219","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity","secondary_identifiers":["RHEA:13545"],"synonyms":[{"name":"4,8,12-trimethyl-1,3,7,11-tridecatetraene synthase activity","type":"exact"},{"name":"TMTT synthase activity","type":"exact"}],"termid":"GO:0097007"}


id: FYPO:0007099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the lengthening of the distance between poles of the meiotic spindle that occurs as part of the first meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"normal spindle elongation in meiosis I","synonyms":[{"name":"normal meiotic spindle elongation in first meiotic nuclear division","type":"exact"},{"name":"normal meiotic spindle elongation in meiosis I","type":"exact"}],"termid":"FYPO:0007099"}


id: PBO:0016896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Kri1 (predicted)","termid":"PBO:0016896"}


id: PBO:0060633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicalin","termid":"PBO:0060633"}


id: GO:0016272
data:
  {"annotated_genes":["SJAG_00524","SJAG_05191","SJAG_00505","SJAG_03463","SJAG_01545","SJAG_04012"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88946,88975,92824,93581,102366,102604],"is_not":false,"summary":null,"term":"GO:0016272"}]},"cv_name":"cellular_component","definition":"A multisubunit chaperone that is capable of delivering unfolded proteins to cytosolic chaperonin, which it acts as a cofactor for. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits. In Saccharomyces cerevisiae, it also acts in the nucleus to regulate the rate of elongation by RNA polymerase II via a direct effect on histone dynamics.","definition_xrefs":["GOC:jl","PMID:24068951","PMID:9630229","PMID:17384227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00505":null,"SJAG_00524":null,"SJAG_01545":null,"SJAG_03463":null,"SJAG_04012":null,"SJAG_05191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"prefoldin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Prefoldin"],"synonyms":[{"name":"GIM complex","type":"narrow"}],"termid":"GO:0016272","terms_by_termid":{"GO:0016272":null}}


id: PBO:0088416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit 11","termid":"PBO:0088416"}


id: GO:0047164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biochanin-A + malonyl-CoA = 6'-malonyl-biochanin A + CoA.","definition_xrefs":["EC:2.3.1.115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-malonyltransferase activity","termid":"GO:0050736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"isoflavone-7-O-beta-glucoside 6''-O-malonyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4703","RHEA:15581"],"synonyms":[{"name":"MAT-7","type":"related"},{"name":"flavone (flavonol) 7-O-glycoside malonyltransferase activity","type":"related"},{"name":"flavone/flavonol 7-O-beta-D-glucoside malonyltransferase activity","type":"related"},{"name":"malonyl-CoA:flavone/flavonol 7-O-glucoside malonyltransferase activity","type":"related"},{"name":"malonyl-CoA:isoflavone-7-O-beta-D-glucoside 6''-O-malonyltransferase activity","type":"related"},{"name":"malonyl-coenzyme A:flavone/flavonol-7-O-glycoside malonyltransferase activity","type":"related"},{"name":"malonyl-coenzyme A:isoflavone 7-O-glucoside-6''-malonyltransferase activity","type":"related"}],"termid":"GO:0047164"}


id: PBO:0078993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 1-3","termid":"PBO:0078993"}


id: PBO:0049317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta pseudogene 2","termid":"PBO:0049317"}


id: PBO:0091749
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1950050_1950051insG","termid":"PBO:0091749"}


id: PBO:0050326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 28","termid":"PBO:0050326"}


id: GO:0097641
data:
  {"annotated_genes":["SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113545],"is_not":false,"summary":null,"term":"GO:0097641"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate (alpha-ketoglutarate) + O2 + xanthine = CO2 + succinate + urate.","definition_xrefs":["PMID:15948966","PMID:17429948","GOC:vw","RHEA:43120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"alpha-ketoglutarate-dependent xanthine dioxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2-oxoglutarate-dependent xanthine dioxygenase activity","type":"exact"},{"name":"alpha-ketoglutarate- and Fe(II)-dependent xanthine dioxygenase activity","type":"related"},{"name":"alpha-ketoglutarate- and Fe(II)-dependent xanthine hydroxylase activity","type":"related"}],"termid":"GO:0097641","terms_by_termid":{"GO:0097641":null}}


id: PBO:0065387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSIP1 pseudogene 1","termid":"PBO:0065387"}


id: FYPO:0007827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin contractile ring organization is normal (i.e. indistinguishable from wild type). The process results in the assembly, arrangement of constituent parts, or disassembly of the actomyosin contractile ring.","definition_xrefs":["GO:0044837","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal actomyosin contractile ring organization","synonyms":[{"name":"normal actomyosin contractile ring organisation","type":"exact"},{"name":"normal actomyosin contractile ring organization during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring organization during vegetative growth","type":"exact"},{"name":"normal contractile ring organization","type":"exact"}],"termid":"FYPO:0007827"}


id: PBO:0046847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 7 pseudogene 2","termid":"PBO:0046847"}


id: GO:0032444
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptionally active complex that binds to an activin response element (ARE) in the promoter of target genes, and is composed of two SMAD2 proteins, one SMAD4 protein and a Forkhead activin signal transducer (FAST) transcription factor.","definition_xrefs":["PMID:12374795","PMID:9288972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"activin responsive factor complex","synonyms":[{"name":"ARF complex","type":"exact"}],"termid":"GO:0032444"}


id: GO:0035332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hippo signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hippo signaling","termid":"GO:0035330"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"hippo signaling","termid":"GO:0035329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hippo signaling","synonyms":[{"name":"positive regulation of hippo signaling cascade","type":"related"},{"name":"positive regulation of hippo signaling pathway","type":"exact"},{"name":"positive regulation of hippo signalling cascade","type":"related"}],"termid":"GO:0035332"}


id: GO:0001588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neurotransmitter dopamine and activating adenylate cyclase via coupling to Gs to initiate a change in cell activity.","definition_xrefs":["IUPHAR_RECEPTOR:2260","ISBN:0953351033","GOC:mah","IUPHAR_RECEPTOR:2252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine neurotransmitter receptor activity","termid":"GO:0004952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"dopamine neurotransmitter receptor activity, coupled via Gs","secondary_identifiers":["GO:0001590","GO:0001589"],"synonyms":[{"name":"dopamine D1 receptor activity","type":"narrow"},{"name":"dopamine D5 receptor activity","type":"narrow"}],"termid":"GO:0001588"}


id: GO:1902689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of NAD metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:di","GOC:TermGenie","PMID:19846558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"is_a","term_name":"regulation of NAD metabolic process","termid":"GO:1902688"},{"relation_name":"negatively_regulates","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of NAD metabolic process","synonyms":[{"name":"down regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"down regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"down regulation of NAD metabolic process","type":"exact"},{"name":"down regulation of NAD metabolism","type":"exact"},{"name":"down regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"down regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"down regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"down regulation of oxidized NAD metabolic process","type":"exact"},{"name":"down regulation of oxidized NAD metabolism","type":"exact"},{"name":"down regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"down regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"down-regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"down-regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"down-regulation of NAD metabolic process","type":"exact"},{"name":"down-regulation of NAD metabolism","type":"exact"},{"name":"down-regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"down-regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"down-regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"down-regulation of oxidized NAD metabolic process","type":"exact"},{"name":"down-regulation of oxidized NAD metabolism","type":"exact"},{"name":"down-regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"down-regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"downregulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"downregulation of NAD (oxidized) metabolism","type":"exact"},{"name":"downregulation of NAD metabolic process","type":"exact"},{"name":"downregulation of NAD metabolism","type":"exact"},{"name":"downregulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"downregulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"downregulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"downregulation of oxidized NAD metabolic process","type":"exact"},{"name":"downregulation of oxidized NAD metabolism","type":"exact"},{"name":"downregulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"downregulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"inhibition of NAD (oxidized) metabolic process","type":"narrow"},{"name":"inhibition of NAD (oxidized) metabolism","type":"narrow"},{"name":"inhibition of NAD metabolic process","type":"narrow"},{"name":"inhibition of NAD metabolism","type":"narrow"},{"name":"inhibition of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"inhibition of nicotinamide adenine dinucleotide metabolic process","type":"narrow"},{"name":"inhibition of nicotinamide adenine dinucleotide metabolism","type":"narrow"},{"name":"inhibition of oxidized NAD metabolic process","type":"narrow"},{"name":"inhibition of oxidized NAD metabolism","type":"narrow"},{"name":"inhibition of oxidized nicotinamide adenine dinucleotide metabolic process","type":"narrow"},{"name":"inhibition of oxidized nicotinamide adenine dinucleotide metabolism","type":"narrow"},{"name":"negative regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"negative regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"negative regulation of NAD metabolism","type":"exact"},{"name":"negative regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"negative regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"negative regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"negative regulation of oxidized NAD metabolic process","type":"exact"},{"name":"negative regulation of oxidized NAD metabolism","type":"exact"},{"name":"negative regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"negative regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:1902689"}


id: PBO:0050096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 6","termid":"PBO:0050096"}


id: FYPO:0006132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mevalonate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular mevalonate level","synonyms":[{"name":"increased cellular mevalonate level during mitotic cell cycle","type":"related"},{"name":"increased cellular mevalonate level during vegetative growth","type":"exact"},{"name":"increased mevalonate accumulation","type":"related"}],"termid":"FYPO:0006132"}


id: PBO:0050976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon related developmental regulator 2","termid":"PBO:0050976"}


id: PBO:0068928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 171, pseudogene","termid":"PBO:0068928"}


id: GO:0102822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'-hydroxyflavone + S-adenosyl-L-methionine = a 3'-methoxyflavone + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:55332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"flavone 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8262","EC:2.1.1.42","EC:2.1.1.267"],"synonyms":[{"name":"luteolin O-methyltransferase activity","type":"narrow"},{"name":"quercetin 3'-O-methyltransferase activity","type":"narrow"}],"termid":"GO:0102822"}


id: GO:0140759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 56) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 56). This reaction is the addition of a methyl group to the lysine residue at position 56 of the histone H3 protein.","definition_xrefs":["PMID:23451023","PMID:28743002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016740","GO:0016741","GO:0008276"],"is_obsolete":false,"name":"histone H3K56 methyltransferase activity","secondary_identifiers":["EC:2.1.1.319","EC:2.1.1.320"],"synonyms":[{"name":"histone H3K56 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone-H3K56 methyltransferase activity","type":"exact"}],"termid":"GO:0140759"}


id: PR:Q10185
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abc2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette transporter abc2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.11c","synonyms":[{"name":"ABC transporter abc2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-energized glutathione S-conjugate pump abc2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-abc2","type":"exact"},{"name":"glutathione S-conjugate-transporting ATPase abc2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10185"}


id: GO:0019961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interferon, a protein produced by the immune systems of many animals in response to a challenge by a foreign agent.","definition_xrefs":["PMID:9607096","Wikipedia:Interferon"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interferon binding","synonyms":[{"name":"IFN binding","type":"exact"}],"termid":"GO:0019961"}


id: FYPO:0000275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell cycle phenotype in which cells are viable only if a spindle checkpoint functions normally.","definition_xrefs":["PomBase:mah","PMID:15483052"],"gene_count":0,"genotype_count":0,"name":"obsolete spindle checkpoint required (obsolete FYPO:0000275)","termid":"FYPO:0000275"}


id: GO:1990425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated calcium-release channel complex of the sarcoplasmic or endoplasmic reticulum. It plays an important role in the excitation-contraction (E-C) coupling of muscle cells. RyR comprises a family of ryanodine receptors, widely expressed throughout the animal kingdom.","definition_xrefs":["PMID:22822064","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel complex","termid":"GO:0005891"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005789","GO:0032991","GO:0005886","GO:0005737"],"is_obsolete":false,"name":"ryanodine receptor complex","synonyms":[{"name":"RyR","type":"related"}],"termid":"GO:1990425"}


id: GO:0047771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-5-carboxymethylhydantoin + H2O = N-carbamoyl-L-aspartate + H+.","definition_xrefs":["RHEA:12028","EC:3.5.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"carboxymethylhydantoinase activity","secondary_identifiers":["MetaCyc:CARBOXYMETHYLHYDANTOINASE-RXN","KEGG_REACTION:R02284"],"synonyms":[{"name":"L-5-carboxymethylhydantoin amidohydrolase activity","type":"related"},{"name":"hydantoin hydrolase activity","type":"related"}],"termid":"GO:0047771"}


id: PBO:0039135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor interacting protein like 1","termid":"PBO:0039135"}


id: PATO:0002409
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Bounded structure filled with fluid.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluid-filled","termid":"PATO:0002409"}


id: GO:0097344
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that comprises Rix1p, Ipi1p and Ipi3p, and is required for processing of ITS2 sequences from 35S pre-rRNA. The Rix1 complex has been identified in budding yeast and fission yeast, and members of this complex are conserved in higher eukaryotes.","definition_xrefs":["PMID:21385875","PMID:15260980","PMID:14759368","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete Rix1 complex (obsolete GO:0097344)","synonyms":[{"name":"IPI complex","type":"exact"}],"termid":"GO:0097344"}


id: GO:2000065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cortisol biosynthetic process.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid biosynthetic process","termid":"GO:0031947"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"is_a","term_name":"regulation of cortisol biosynthetic process","termid":"GO:2000064"},{"relation_name":"negatively_regulates","term_name":"cortisol biosynthetic process","termid":"GO:0034651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cortisol biosynthetic process","synonyms":[{"name":"negative regulation of cortisol anabolism","type":"related"},{"name":"negative regulation of cortisol biosynthesis","type":"exact"},{"name":"negative regulation of cortisol formation","type":"exact"},{"name":"negative regulation of cortisol synthesis","type":"exact"}],"termid":"GO:2000065"}


id: GO:0003145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the embryonic heart tube by the cells of the heart field along a linear axis.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic heart tube formation","termid":"GO:0003144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube formation via epithelial folding","termid":"GO:0003145"}


id: PBO:0048129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 9","termid":"PBO:0048129"}


id: GO:0043919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + S-adenosyl 3-(methylsulfanyl)propylamine = H+ + N1-(3-aminopropyl)agmatine + S-methyl-5'-thioadenosine.","definition_xrefs":["RHEA:36487","PMID:15983049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"agmatine aminopropyltransferase activity","secondary_identifiers":["EC:2.5.1.104"],"synonyms":[{"name":"agmatine aminopropyl transferase activity","type":"exact"}],"termid":"GO:0043919"}


id: PBO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 69","termid":"PBO:0050366"}


id: PBO:0040348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 5","termid":"PBO:0040348"}


id: PBO:0028528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_rDNA","termid":"PBO:0028528"}


id: SO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified phenylalanine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_phenylalanine","secondary_identifiers":["MOD:00914"],"synonyms":[{"name":"ModPhe","type":"exact"},{"name":"modified L phenylalanine","type":"exact"},{"name":"modified L-phenylalanine","type":"exact"}],"termid":"SO:0001397"}


id: PBO:0005470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CtIP-related endonuclease","termid":"PBO:0005470"}


id: GO:0048020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR chemokine receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"CCR chemokine receptor binding","synonyms":[{"name":"CCR chemokine receptor ligand","type":"narrow"},{"name":"beta chemokine receptor binding","type":"exact"},{"name":"beta chemokine receptor ligand","type":"narrow"}],"termid":"GO:0048020"}


id: GO:0060433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a bronchus from an initial condition to its mature state. This process begins with the formation of the bronchus and ends with the mature structure. The bronchus is the portion of the airway that connects to the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory tube development","termid":"GO:0030323"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus development","termid":"GO:0060433"}


id: GO:0106273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins from the cystosol to the endoplasmic reticulum-Golgi intermediate compartment (ERGIC).","definition_xrefs":["PMID:32272059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cytosol to ERGIC protein transport","termid":"GO:0106273"}


id: PBO:0076031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 31","termid":"PBO:0076031"}


id: GO:1902090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumagillin biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23488861","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"fumagillin biosynthetic process","termid":"GO:1902086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of fumagillin biosynthetic process","synonyms":[{"name":"regulation of fumagillin anabolism","type":"exact"},{"name":"regulation of fumagillin biosynthesis","type":"exact"},{"name":"regulation of fumagillin formation","type":"exact"},{"name":"regulation of fumagillin synthesis","type":"exact"}],"termid":"GO:1902090"}


id: GO:0048801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the antennal joint are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"antennal joint development","termid":"GO:0048098"},{"relation_name":"part_of","term_name":"antennal morphogenesis","termid":"GO:0048800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal joint morphogenesis","termid":"GO:0048801"}


id: PBO:0051064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 4-11 (non-functional)","termid":"PBO:0051064"}


id: RO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x 'has starts location' y if and only if there exists some process z such that x 'starts with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_start_location","termid":"RO:0002231"}


id: PBO:0004481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroceramide delta-4 desaturase","termid":"PBO:0004481"}


id: SO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U5 RNA is a component of both types of known spliceosome. The precise function of this molecule is unknown, though it is known that the 5' loop is required for splice site selection and p220 binding, and that both the 3' stem-loop and the Sm site are important for Sm protein binding and cap methylation.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U5_snRNA"],"synonyms":[{"name":"U5 small nuclear RNA","type":"exact"},{"name":"U5 snRNA","type":"exact"},{"name":"small nuclear RNA U5","type":"exact"},{"name":"snRNA U5","type":"exact"}],"termid":"SO:0000395"}


id: FYPO:0001988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) at a pH higher than that of standard S. pombe growth medium (abut 5.8).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal cell population growth at high pH","synonyms":[{"name":"normal growth at high pH","type":"broad"},{"name":"normal vegetative cell population growth at high pH","type":"exact"}],"termid":"FYPO:0001988"}


id: GO:0102500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-D-glucose + a plant soluble heteroglycan = a plant soluble heteroglycan + maltose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-maltose 4-alpha-glucanotransferase activity (obsolete GO:0102500)","termid":"GO:0102500"}


id: GO:0005149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-1 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-1 receptor binding","synonyms":[{"name":"IL-1","type":"narrow"},{"name":"interleukin-1 receptor ligand","type":"narrow"}],"termid":"GO:0005149"}


id: PBO:0057882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3186","termid":"PBO:0057882"}


id: PBO:0077189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia homeobox 1","termid":"PBO:0077189"}


id: PR:Q9US55
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A neutral alpha-glucosidase AB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00737","PANTHER:PTHR22762:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase 2 subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.03c","secondary_identifiers":["UniProtKB:Q9US55"],"synonyms":[{"name":"Spom972h-GANAB","type":"exact"},{"name":"alpha-glucosidase II subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glucosidase II gls2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glucosidase II subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US55"}


id: PBO:0050726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 12","termid":"PBO:0050726"}


id: GO:0036260
data:
  {"annotated_genes":["SJAG_04527","SJAG_03901","SJAG_04488","SJAG_01713","SJAG_04034","SJAG_01724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036261"},{"annotations":[103831,112936,104358,95066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[98269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[59440],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which a cap structure is added to the 5' end of nascent RNA polymerase transcripts. Examples of RNA capping include 7-methyl-G caps found on all RNA polymerase II transcripts and nucleotide-containing cofactor caps, such as NAD(H) or FAD, found on bacterial trancripts.","definition_xrefs":["PMID:18775984","PMID:27383794","PMID:29681497","PMID:30353673","GOC:bf","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 5'-end processing","termid":"GO:0000966"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_01724":null,"SJAG_03901":null,"SJAG_04034":null,"SJAG_04488":null,"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA capping","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0036260","terms_by_termid":{"GO:0006370":null,"GO:0036261":null,"GO:0106005":null,"GO:0106410":null}}


id: FYPO:0004992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during interphase of the meiotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiotic cell cycle","termid":"FYPO:0004991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during meiotic interphase","synonyms":[{"name":"decreased protein accumulation during meiotic interphase","type":"related"},{"name":"decreased protein level during interphase of meiotic cell cycle","type":"exact"},{"name":"reduced protein level during meiotic interphase","type":"exact"}],"termid":"FYPO:0004992"}


id: PBO:0061555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, cytosolic pseudogene 2","termid":"PBO:0061555"}


id: PBO:0047320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 4","termid":"PBO:0047320"}


id: GO:0061083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the rate, frequency, or extent of protein refolding. Protein refolding is the process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein folding","termid":"GO:1903332"},{"relation_name":"regulates","term_name":"protein refolding","termid":"GO:0042026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0008150","GO:0006457"],"is_obsolete":false,"name":"regulation of protein refolding","termid":"GO:0061083"}


id: PBO:0039055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 4","termid":"PBO:0039055"}


id: PATO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer with some kind of aperture or opening that is blocked or clogged.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congested","termid":"PATO:0001836"}


id: GO:0031349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of defense response","synonyms":[{"name":"activation of defense response","type":"narrow"},{"name":"stimulation of defense response","type":"narrow"},{"name":"up regulation of defense response","type":"exact"},{"name":"up-regulation of defense response","type":"exact"},{"name":"upregulation of defense response","type":"exact"}],"termid":"GO:0031349"}


id: PBO:0058095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4311","termid":"PBO:0058095"}


id: PBO:0054598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2002","termid":"PBO:0054598"}


id: PBO:0005183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Cut15","termid":"PBO:0005183"}


id: PBO:0050874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta","termid":"PBO:0050874"}


id: PBO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N syndrome","termid":"PBO:0002047"}


id: PR:Q10112
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18G6.13 gene.","definition_xrefs":["UniProtKB:Q10112","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18G6.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.13","synonyms":[{"name":"Spom972h-SPAC18G6.13","type":"exact"}],"termid":"PR:Q10112"}


id: PBO:0005476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Mms2","termid":"PBO:0005476"}


id: GO:0043562
data:
  {"annotated_genes":["SJAG_04725","SJAG_00256","SJAG_00781","SJAG_03256","SJAG_03309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[99955],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901481"},{"annotations":[99958,98911],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901482"},{"annotations":[83887,97475],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of inorganic nitrogen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00781":null,"SJAG_03256":null,"SJAG_03309":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrogen levels","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043562","terms_by_termid":{"GO:0031142":null,"GO:1901481":null,"GO:1901482":null,"GO:1905287":null}}


id: PBO:0059237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L10","termid":"PBO:0059237"}


id: PBO:0054901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2315","termid":"PBO:0054901"}


id: PBO:0076536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 63 pseudogene","termid":"PBO:0076536"}


id: PR:O14321
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg6 gene.","definition_xrefs":["UniProtKB:O14321","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol 24-C-methyltransferase erg6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.05","synonyms":[{"name":"Spom972h-erg6","type":"exact"},{"name":"delta(24)-sterol C-methyltransferase erg6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ergosterol biosynthesis protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14321"}


id: FYPO:0004301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GO:0051306","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic sister chromatid separation","synonyms":[{"name":"normal mitotic chromosome separation","type":"exact"},{"name":"normal mitotic sister chromatid disjunction","type":"related"},{"name":"normal mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"normal sister chromatid separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004301"}


id: GO:0021641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the trochlear nerve. This process pertains to the physical shaping of a rudimentary structure. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"trochlear nerve morphogenesis","termid":"GO:0021639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve structural organization","synonyms":[{"name":"CN IV structural organization","type":"related"},{"name":"trochlear nerve structural organisation","type":"exact"}],"termid":"GO:0021641"}


id: PATO:0000032
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000032 secondary product composition (obsolete PATO:0000032)","termid":"PATO:0000032"}


id: PBO:0081140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP37 zinc finger protein","termid":"PBO:0081140"}


id: GO:0005730
data:
  {"annotated_genes":["SJAG_05237","SJAG_00764","SJAG_01670","SJAG_02094","SJAG_02608","SJAG_00731","SJAG_00166","SJAG_01476","SJAG_04979","SJAG_04257","SJAG_02508","SJAG_04310","SJAG_05186","SJAG_04562","SJAG_02283","SJAG_03144","SJAG_01907","SJAG_02830","SJAG_02702","SJAG_02382","SJAG_01915","SJAG_03728","SJAG_04004","SJAG_04669","SJAG_04766","SJAG_02812","SJAG_04256","SJAG_03906","SJAG_04414","SJAG_04140","SJAG_04974","SJAG_00468","SJAG_00311","SJAG_01818","SJAG_04289","SJAG_01604","SJAG_00887","SJAG_03897","SJAG_03159","SJAG_02536","SJAG_02070","SJAG_04650","SJAG_02829","SJAG_00617","SJAG_01122","SJAG_02899","SJAG_03016","SJAG_03161","SJAG_01853","SJAG_02025","SJAG_01712","SJAG_04601","SJAG_03127","SJAG_03026","SJAG_01764","SJAG_04940","SJAG_03020","SJAG_01454","SJAG_00841","SJAG_04142","SJAG_04424","SJAG_04919","SJAG_04897","SJAG_03901","SJAG_04006","SJAG_00572","SJAG_02723","SJAG_02775","SJAG_05307","SJAG_00178","SJAG_03424","SJAG_01193","SJAG_02553","SJAG_00689","SJAG_02682","SJAG_01387","SJAG_01744","SJAG_02747","SJAG_03967","SJAG_01650","SJAG_00697","SJAG_02469","SJAG_04108","SJAG_02790","SJAG_01005","SJAG_04663","SJAG_03846","SJAG_01562","SJAG_02417","SJAG_02499","SJAG_05248","SJAG_00344","SJAG_04224","SJAG_02475","SJAG_02871","SJAG_00421","SJAG_04210","SJAG_00879","SJAG_04838","SJAG_00410","SJAG_02879","SJAG_04754","SJAG_03956","SJAG_03554","SJAG_01509","SJAG_02952","SJAG_03971","SJAG_05187","SJAG_01988","SJAG_00840","SJAG_04478","SJAG_03844","SJAG_03156","SJAG_01391","SJAG_01936","SJAG_00259","SJAG_04524","SJAG_03568","SJAG_03840","SJAG_01420","SJAG_04395","SJAG_02294","SJAG_02281","SJAG_05331","SJAG_04346","SJAG_03425","SJAG_01327","SJAG_16455","SJAG_02250","SJAG_02535","SJAG_00269","SJAG_00523","SJAG_01811","SJAG_02253","SJAG_01606","SJAG_00986","SJAG_04992","SJAG_04195","SJAG_03468","SJAG_00949","SJAG_03551","SJAG_00202","SJAG_03341","SJAG_05193","SJAG_02547","SJAG_00566","SJAG_00245","SJAG_01498","SJAG_03888","SJAG_01365","SJAG_00749","SJAG_01132","SJAG_04680","SJAG_00142","SJAG_04308","SJAG_05338","SJAG_05679","SJAG_03898","SJAG_04056","SJAG_01431","SJAG_03905","SJAG_00271","SJAG_03458","SJAG_03719","SJAG_04106","SJAG_01839","SJAG_03919","SJAG_03217","SJAG_03430","SJAG_04069","SJAG_02396","SJAG_04817","SJAG_01201","SJAG_00207","SJAG_03666","SJAG_02101","SJAG_00692","SJAG_02377","SJAG_04128","SJAG_04039","SJAG_00657","SJAG_01226","SJAG_03954","SJAG_04261","SJAG_04916","SJAG_01272","SJAG_03411","SJAG_01765","SJAG_03460","SJAG_01698","SJAG_03479","SJAG_03028","SJAG_02653","SJAG_03070","SJAG_02189","SJAG_00646","SJAG_02033","SJAG_00159","SJAG_00854","SJAG_01674","SJAG_03252","SJAG_05190","SJAG_04160","SJAG_03730","SJAG_00562","SJAG_02427","SJAG_04339","SJAG_04083","SJAG_01182","SJAG_03410","SJAG_02546","SJAG_02409","SJAG_00163","SJAG_01191","SJAG_00772","SJAG_03008","SJAG_02736","SJAG_02680","SJAG_04118","SJAG_00253","SJAG_02544","SJAG_03874","SJAG_03923","SJAG_00306","SJAG_00616","SJAG_01369","SJAG_02300","SJAG_00629","SJAG_05180","SJAG_00943","SJAG_03603","SJAG_01623","SJAG_03617","SJAG_03796","SJAG_02813","SJAG_00798","SJAG_01313","SJAG_00294","SJAG_00945","SJAG_04656","SJAG_01494","SJAG_02749","SJAG_00082","SJAG_02690","SJAG_02046","SJAG_00813","SJAG_03745","SJAG_01125","SJAG_00220","SJAG_04575","SJAG_02318","SJAG_03931","SJAG_03578","SJAG_02891","SJAG_00538","SJAG_01799","SJAG_00748","SJAG_04153","SJAG_00882","SJAG_06613","SJAG_04767","SJAG_03454","SJAG_02207","SJAG_04527","SJAG_04081","SJAG_00583","SJAG_04911","SJAG_01632","SJAG_00047","SJAG_01548","SJAG_03780","SJAG_00932","SJAG_02209","SJAG_02662","SJAG_01084","SJAG_03713","SJAG_01323","SJAG_01049","SJAG_01250","SJAG_03080","SJAG_04084","SJAG_02835","SJAG_03832","SJAG_01280","SJAG_00921","SJAG_04033","SJAG_00965","SJAG_02758","SJAG_04180","SJAG_00722","SJAG_02922","SJAG_03413","SJAG_02870","SJAG_01377","SJAG_01153","SJAG_02372","SJAG_04599","SJAG_02911","SJAG_00838","SJAG_01877","SJAG_01375","SJAG_04993","SJAG_02024","SJAG_03012","SJAG_02335","SJAG_01234","SJAG_06022","SJAG_02585","SJAG_02644","SJAG_03654","SJAG_01169","SJAG_04491","SJAG_01580","SJAG_01495","SJAG_00083","SJAG_01551","SJAG_01565","SJAG_02527","SJAG_01821","SJAG_01282","SJAG_02754","SJAG_04436","SJAG_00955","SJAG_03952","SJAG_04863","SJAG_03872","SJAG_04492","SJAG_00897","SJAG_04582","SJAG_02073","SJAG_02560","SJAG_02681","SJAG_00744","SJAG_04141","SJAG_01176","SJAG_03877","SJAG_01948","SJAG_02530","SJAG_03569","SJAG_05276","SJAG_01813","SJAG_04324","SJAG_04610","SJAG_04908","SJAG_02759","SJAG_00883","SJAG_04330","SJAG_00323","SJAG_05253","SJAG_01444","SJAG_03234","SJAG_02287","SJAG_02821","SJAG_03583","SJAG_03077","SJAG_04596","SJAG_03419","SJAG_03179","SJAG_01575","SJAG_03466","SJAG_00364","SJAG_01296","SJAG_05216","SJAG_02043","SJAG_01752","SJAG_00363","SJAG_03984","SJAG_01128","SJAG_01347","SJAG_01275"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74426,76041,78065,83628,83697,83698,83720,83778,83962,83970,84035,84112,84353,84383,84406,84602,84787,84821,84857,84901,85231,85654,85871,85951,85976,86023,86043,86078,86131,86132,86820,86846,86854,86893,86964,87049,87050,87051,87250,87336,87389,87422,87536,87648,87666,87706,87897,88031,88048,88066,88118,88234,88262,88409,88547,88635,88671,88832,88928,89031,89235,89319,89399,89448,89654,89655,89717,89718,89719,89734,89740,89777,90171,90370,90526,90749,90926,90927,90944,91166,91167,91368,91449,91454,91473,91674,91686,91700,91781,91798,91861,91875,91999,92053,92062,92095,92174,92316,92445,92516,92559,92738,93107,93181,93314,93374,93482,93483,93514,93515,93567,93942,93956,94043,94048,94485,94599,94718,94719,94863,94866,94926,94940,95262,95281,95345,95492,95546,95698,95725,95742,95743,95817,95901,96295,96318,96486,96493,96549,96554,96563,96679,96731,96821,96846,97125,97254,97495,97583,97658,97771,97954,97965,98171,98266,98620,98677,98785,99006,99016,99234,99462,99482,99620,99766,99781,99791,100172,100224,100225,100252,100403,100421,100536,100670,100745,100911,100921,100966,100995,101041,101376,101392,101400,101525,101526,101599,101752,101772,101773,101790,101791,101847,101848,101867,101910,102118,102284,102336,102409,102461,102582,102626,102732,102829,102830,102925,102926,103045,103239,103333,103364,103410,103497,103568,103584,103754,103822,104082,104125,104228,104309,104460,104461,104668,104838,105141,105147,105235,105265,105681,105709,105862,105919,106183,106240,106622,106711,106789,106828,106916,106950,106958,107117,107202,107343,107356,107364,107495,107593,107838,107930,108051,108098,108149,108176,108177,108204,108231,108256,108295,108440,108450,108594,108668,108832,108852,108959,109039,109058,109157,109235,109332,109426,109481,109547,109593,109594,109595,109651,109702,109742,109778,109833,110027,110058,110072,110181,110272,110380,110514,110628,110688,110689,110705,110714,110715,110886,110984,111010,111097,111237,111337,111366,111487,111525,111526,111612,111822,111879,111922,111947,111948,112056,112379,112406,112526,112544,112614,112733,112763,112833,112930,113060,113110,113326,113410,113615,113616,113792,113835,113845,113846,113961,114159,114202,115080,115099,115171,115467,115693,115694],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[86042,91402,97253,102408],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031429"},{"annotations":[84856],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001651"},{"annotations":[87705,87535,89733],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034457"},{"annotations":[94634,102763,103927,88387,99015,91367],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030874"},{"annotations":[111564,98148,111476,100889,95575,90748,109650,87111,92857,100669,114772],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005655"},{"annotations":[102120,96488,106952],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070545"},{"annotations":[107931,103234,104019,111234,106115],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034388"},{"annotations":[115650,97260,111447,95364],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030875"},{"annotations":[109678,86409,109677,110382,98787,105921,101912,106829,98640,91800,100996,111694,109304,88050,83712,99448,83711,85585,89944,109962],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005736"},{"annotations":[108089,105291,105879],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070860"},{"annotations":[87379,105292,108090,91632],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000120"},{"annotations":[112630,101393,91456,89201],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000500"},{"annotations":[106713,102099,85269,88068,88659,103096],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034455"},{"annotations":[89780,104543,108233,108152,87206],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034456"}]},"cv_name":"cellular_component","definition":"A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"nuclear lumen","termid":"GO:0031981"}],"gene_count":370,"genes_by_uniquename":{"SJAG_00047":null,"SJAG_00082":null,"SJAG_00083":null,"SJAG_00142":null,"SJAG_00159":null,"SJAG_00163":null,"SJAG_00166":null,"SJAG_00178":null,"SJAG_00202":null,"SJAG_00207":null,"SJAG_00220":null,"SJAG_00245":null,"SJAG_00253":null,"SJAG_00259":null,"SJAG_00269":null,"SJAG_00271":null,"SJAG_00294":null,"SJAG_00306":null,"SJAG_00311":null,"SJAG_00323":null,"SJAG_00344":null,"SJAG_00363":null,"SJAG_00364":null,"SJAG_00410":null,"SJAG_00421":null,"SJAG_00468":null,"SJAG_00523":null,"SJAG_00538":null,"SJAG_00562":null,"SJAG_00566":null,"SJAG_00572":null,"SJAG_00583":null,"SJAG_00616":null,"SJAG_00617":null,"SJAG_00629":null,"SJAG_00646":null,"SJAG_00657":null,"SJAG_00689":null,"SJAG_00692":null,"SJAG_00697":null,"SJAG_00722":null,"SJAG_00731":null,"SJAG_00744":null,"SJAG_00748":null,"SJAG_00749":null,"SJAG_00764":null,"SJAG_00772":null,"SJAG_00798":null,"SJAG_00813":null,"SJAG_00838":null,"SJAG_00840":null,"SJAG_00841":null,"SJAG_00854":null,"SJAG_00879":null,"SJAG_00882":null,"SJAG_00883":null,"SJAG_00887":null,"SJAG_00897":null,"SJAG_00921":null,"SJAG_00932":null,"SJAG_00943":null,"SJAG_00945":null,"SJAG_00949":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_00986":null,"SJAG_01005":null,"SJAG_01049":null,"SJAG_01084":null,"SJAG_01122":null,"SJAG_01125":null,"SJAG_01128":null,"SJAG_01132":null,"SJAG_01153":null,"SJAG_01169":null,"SJAG_01176":null,"SJAG_01182":null,"SJAG_01191":null,"SJAG_01193":null,"SJAG_01201":null,"SJAG_01226":null,"SJAG_01234":null,"SJAG_01250":null,"SJAG_01272":null,"SJAG_01275":null,"SJAG_01280":null,"SJAG_01282":null,"SJAG_01296":null,"SJAG_01313":null,"SJAG_01323":null,"SJAG_01327":null,"SJAG_01347":null,"SJAG_01365":null,"SJAG_01369":null,"SJAG_01375":null,"SJAG_01377":null,"SJAG_01387":null,"SJAG_01391":null,"SJAG_01420":null,"SJAG_01431":null,"SJAG_01444":null,"SJAG_01454":null,"SJAG_01476":null,"SJAG_01494":null,"SJAG_01495":null,"SJAG_01498":null,"SJAG_01509":null,"SJAG_01548":null,"SJAG_01551":null,"SJAG_01562":null,"SJAG_01565":null,"SJAG_01575":null,"SJAG_01580":null,"SJAG_01604":null,"SJAG_01606":null,"SJAG_01623":null,"SJAG_01632":null,"SJAG_01650":null,"SJAG_01670":null,"SJAG_01674":null,"SJAG_01698":null,"SJAG_01712":null,"SJAG_01744":null,"SJAG_01752":null,"SJAG_01764":null,"SJAG_01765":null,"SJAG_01799":null,"SJAG_01811":null,"SJAG_01813":null,"SJAG_01818":null,"SJAG_01821":null,"SJAG_01839":null,"SJAG_01853":null,"SJAG_01877":null,"SJAG_01907":null,"SJAG_01915":null,"SJAG_01936":null,"SJAG_01948":null,"SJAG_01988":null,"SJAG_02024":null,"SJAG_02025":null,"SJAG_02033":null,"SJAG_02043":null,"SJAG_02046":null,"SJAG_02070":null,"SJAG_02073":null,"SJAG_02094":null,"SJAG_02101":null,"SJAG_02189":null,"SJAG_02207":null,"SJAG_02209":null,"SJAG_02250":null,"SJAG_02253":null,"SJAG_02281":null,"SJAG_02283":null,"SJAG_02287":null,"SJAG_02294":null,"SJAG_02300":null,"SJAG_02318":null,"SJAG_02335":null,"SJAG_02372":null,"SJAG_02377":null,"SJAG_02382":null,"SJAG_02396":null,"SJAG_02409":null,"SJAG_02417":null,"SJAG_02427":null,"SJAG_02469":null,"SJAG_02475":null,"SJAG_02499":null,"SJAG_02508":null,"SJAG_02527":null,"SJAG_02530":null,"SJAG_02535":null,"SJAG_02536":null,"SJAG_02544":null,"SJAG_02546":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02560":null,"SJAG_02585":null,"SJAG_02608":null,"SJAG_02644":null,"SJAG_02653":null,"SJAG_02662":null,"SJAG_02680":null,"SJAG_02681":null,"SJAG_02682":null,"SJAG_02690":null,"SJAG_02702":null,"SJAG_02723":null,"SJAG_02736":null,"SJAG_02747":null,"SJAG_02749":null,"SJAG_02754":null,"SJAG_02758":null,"SJAG_02759":null,"SJAG_02775":null,"SJAG_02790":null,"SJAG_02812":null,"SJAG_02813":null,"SJAG_02821":null,"SJAG_02829":null,"SJAG_02830":null,"SJAG_02835":null,"SJAG_02870":null,"SJAG_02871":null,"SJAG_02879":null,"SJAG_02891":null,"SJAG_02899":null,"SJAG_02911":null,"SJAG_02922":null,"SJAG_02952":null,"SJAG_03008":null,"SJAG_03012":null,"SJAG_03016":null,"SJAG_03020":null,"SJAG_03026":null,"SJAG_03028":null,"SJAG_03070":null,"SJAG_03077":null,"SJAG_03080":null,"SJAG_03127":null,"SJAG_03144":null,"SJAG_03156":null,"SJAG_03159":null,"SJAG_03161":null,"SJAG_03179":null,"SJAG_03217":null,"SJAG_03234":null,"SJAG_03252":null,"SJAG_03341":null,"SJAG_03410":null,"SJAG_03411":null,"SJAG_03413":null,"SJAG_03419":null,"SJAG_03424":null,"SJAG_03425":null,"SJAG_03430":null,"SJAG_03454":null,"SJAG_03458":null,"SJAG_03460":null,"SJAG_03466":null,"SJAG_03468":null,"SJAG_03479":null,"SJAG_03551":null,"SJAG_03554":null,"SJAG_03568":null,"SJAG_03569":null,"SJAG_03578":null,"SJAG_03583":null,"SJAG_03603":null,"SJAG_03617":null,"SJAG_03654":null,"SJAG_03666":null,"SJAG_03713":null,"SJAG_03719":null,"SJAG_03728":null,"SJAG_03730":null,"SJAG_03745":null,"SJAG_03780":null,"SJAG_03796":null,"SJAG_03832":null,"SJAG_03840":null,"SJAG_03844":null,"SJAG_03846":null,"SJAG_03872":null,"SJAG_03874":null,"SJAG_03877":null,"SJAG_03888":null,"SJAG_03897":null,"SJAG_03898":null,"SJAG_03901":null,"SJAG_03905":null,"SJAG_03906":null,"SJAG_03919":null,"SJAG_03923":null,"SJAG_03931":null,"SJAG_03952":null,"SJAG_03954":null,"SJAG_03956":null,"SJAG_03967":null,"SJAG_03971":null,"SJAG_03984":null,"SJAG_04004":null,"SJAG_04006":null,"SJAG_04033":null,"SJAG_04039":null,"SJAG_04056":null,"SJAG_04069":null,"SJAG_04081":null,"SJAG_04083":null,"SJAG_04084":null,"SJAG_04106":null,"SJAG_04108":null,"SJAG_04118":null,"SJAG_04128":null,"SJAG_04140":null,"SJAG_04141":null,"SJAG_04142":null,"SJAG_04153":null,"SJAG_04160":null,"SJAG_04180":null,"SJAG_04195":null,"SJAG_04210":null,"SJAG_04224":null,"SJAG_04256":null,"SJAG_04257":null,"SJAG_04261":null,"SJAG_04289":null,"SJAG_04308":null,"SJAG_04310":null,"SJAG_04324":null,"SJAG_04330":null,"SJAG_04339":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04414":null,"SJAG_04424":null,"SJAG_04436":null,"SJAG_04478":null,"SJAG_04491":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04527":null,"SJAG_04562":null,"SJAG_04575":null,"SJAG_04582":null,"SJAG_04596":null,"SJAG_04599":null,"SJAG_04601":null,"SJAG_04610":null,"SJAG_04650":null,"SJAG_04656":null,"SJAG_04663":null,"SJAG_04669":null,"SJAG_04680":null,"SJAG_04754":null,"SJAG_04766":null,"SJAG_04767":null,"SJAG_04817":null,"SJAG_04838":null,"SJAG_04863":null,"SJAG_04897":null,"SJAG_04908":null,"SJAG_04911":null,"SJAG_04916":null,"SJAG_04919":null,"SJAG_04940":null,"SJAG_04974":null,"SJAG_04979":null,"SJAG_04992":null,"SJAG_04993":null,"SJAG_05180":null,"SJAG_05186":null,"SJAG_05187":null,"SJAG_05190":null,"SJAG_05193":null,"SJAG_05216":null,"SJAG_05237":null,"SJAG_05248":null,"SJAG_05253":null,"SJAG_05276":null,"SJAG_05307":null,"SJAG_05331":null,"SJAG_05338":null,"SJAG_05679":null,"SJAG_06022":null,"SJAG_06613":null,"SJAG_16455":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleolus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:23786411":null,"PMID:24184107":null},"secondary_identifiers":["Wikipedia:Nucleolus","NIF_Subcellular:sao1820400233"],"termid":"GO:0005730","terms_by_termid":{"GO:0000120":null,"GO:0000500":null,"GO:0001651":null,"GO:0005655":null,"GO:0005730":null,"GO:0005736":null,"GO:0030874":null,"GO:0030875":null,"GO:0031429":null,"GO:0034388":null,"GO:0034455":null,"GO:0034456":null,"GO:0034457":null,"GO:0070545":null,"GO:0070860":null}}


id: GO:1903085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sinapate ester biosynthesis.","definition_xrefs":["PMID:11080161","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"sinapate ester biosynthetic process","termid":"GO:0033525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of sinapate ester biosynthetic process","synonyms":[{"name":"regulation of sinapate ester anabolism","type":"exact"},{"name":"regulation of sinapate ester biosynthesis","type":"exact"},{"name":"regulation of sinapate ester formation","type":"exact"},{"name":"regulation of sinapate ester synthesis","type":"exact"}],"termid":"GO:1903085"}


id: PBO:0054532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1932","termid":"PBO:0054532"}


id: PATO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A virulence that is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"virulence","termid":"PATO:0002146"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced virulence","synonyms":[{"name":"attenuated","type":"exact"}],"termid":"PATO:0002147"}


id: PBO:0080066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 3","termid":"PBO:0080066"}


id: PBO:0041683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colon adenocarcinoma hypermethylated","termid":"PBO:0041683"}


id: PBO:0082803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; yeast specific, no metazoan counterpart","termid":"PBO:0082803"}


id: GO:0042852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid.","definition_xrefs":["GOC:jsg","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine biosynthetic process","termid":"GO:0006523"},{"relation_name":"is_a","term_name":"pyruvate family amino acid biosynthetic process","termid":"GO:0009079"},{"relation_name":"is_a","term_name":"L-alanine metabolic process","termid":"GO:0042851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-alanine biosynthetic process","synonyms":[{"name":"L-alanine anabolism","type":"exact"},{"name":"L-alanine biosynthesis","type":"exact"},{"name":"L-alanine formation","type":"exact"},{"name":"L-alanine synthesis","type":"exact"}],"termid":"GO:0042852"}


id: PBO:0040631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated RING domain 1","termid":"PBO:0040631"}


id: PBO:0067582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 740, pseudogene","termid":"PBO:0067582"}


id: GO:1904947
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103698],"is_not":false,"summary":null,"term":"GO:1904947"}]},"cv_name":"biological_process","definition":"The process in which folic acid is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["GOC:TermGenie","GOC:rph","PMID:15140890","GO_REF:0000075","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folate transmembrane transport","termid":"GO:0098838"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"folate import into mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"folic acid import into mitochondrion","type":"related"}],"termid":"GO:1904947","terms_by_termid":{"GO:1904947":null}}


id: PBO:0039998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 10","termid":"PBO:0039998"}


id: PBO:0045984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"euchromatic histone lysine methyltransferase 2","termid":"PBO:0045984"}


id: PBO:0044943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrodiol dehydrogenase","termid":"PBO:0044943"}


id: PBO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp108","termid":"PBO:0002484"}


id: PBO:0027857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology_during_prophase_I","termid":"PBO:0027857"}


id: PBO:0088823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp3","termid":"PBO:0088823"}


id: PR:O74917
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C757.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.06","synonyms":[{"name":"Spom972h-SPCC757.06","type":"exact"}],"termid":"PR:O74917"}


id: GO:0042315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of dipeptides, preferentially hydrophobic dipeptides including prolyl amino acids.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosol nonspecific dipeptidase activity (obsolete GO:0042315)","synonyms":[{"name":"cytosol nonspecific dipeptidase activity","type":"exact"}],"termid":"GO:0042315"}


id: PBO:0064950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 1","termid":"PBO:0064950"}


id: PBO:0069333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 592, pseudogene","termid":"PBO:0069333"}


id: PBO:0031289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_segregation","termid":"PBO:0031289"}


id: GO:1901068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanosine-containing compounds (guanosines).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"guanosine-containing compound metabolic process","synonyms":[{"name":"guanosine-containing compound metabolism","type":"exact"},{"name":"guanosines metabolic process","type":"exact"},{"name":"guanosines metabolism","type":"exact"}],"termid":"GO:1901068"}


id: FYPO:0003807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitochondria form branched structures.","definition_xrefs":["PMID:19373772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"net-like mitochondrial morphology","synonyms":[{"name":"branched mitochondria","type":"exact"},{"name":"branched mitochondria during vegetative growth","type":"exact"},{"name":"branched mitochondrion","type":"exact"}],"termid":"FYPO:0003807"}


id: PBO:0087482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromosomal passenger complex (CPC); CPC is comprised of Ipl1p-Sli15p-Bir1p-Nbl1p and regulates chromosome segregation; required for chromosome bi-orientation and for spindle assembly checkpoint activation upon reduced sister kinetochore tension; relative distribution to shortened microtubules increases upon DNA replication stress; sumoylated in an Mms21p-dependent manner; human survivin homolog","termid":"PBO:0087482"}


id: PBO:0074984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-26","termid":"PBO:0074984"}


id: PBO:0048656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein epsilon 1","termid":"PBO:0048656"}


id: PBO:0087320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase; not essential for viability; EPT1 has a paralog, CPT1, that arose from the whole genome duplication","termid":"PBO:0087320"}


id: GO:0070889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a platelet alpha granule. A platelet alpha granule is a secretory organelle found in blood platelets.","definition_xrefs":["GOC:rph","PMID:16123220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet alpha granule organization","synonyms":[{"name":"platelet alpha granule organisation","type":"exact"},{"name":"platelet alpha granule organization and biogenesis","type":"related"},{"name":"platelet alpha-granule organization","type":"exact"}],"termid":"GO:0070889"}


id: FYPO:0007806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a endodeoxyribonuclease activator is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:33836577","PomBase:mah","GO:0140656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal endodeoxyribonuclease activator activity","termid":"FYPO:0007806"}


id: PBO:0066131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 9","termid":"PBO:0066131"}


id: GO:0009279
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.","definition_xrefs":["GOC:mtg_sensu","ISBN:0135712254","GOC:md"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer membrane","termid":"GO:0019867"},{"relation_name":"part_of","term_name":"external encapsulating structure","termid":"GO:0030312"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell outer membrane","synonyms":[{"name":"outer membrane of cell","type":"exact"}],"termid":"GO:0009279"}


id: GO:0015147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-arabinose from one side of a membrane to the other. Arabinose occurs free, for example in the heartwood of many conifers and in the combined states, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides, etc.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose transmembrane transporter activity","termid":"GO:0042900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-arabinose transmembrane transporter activity","synonyms":[{"name":"L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity","type":"narrow"}],"termid":"GO:0015147"}


id: PR:Q9UTM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1420.02c","secondary_identifiers":["UniProtKB:Q9UTM4"],"synonyms":[{"name":"CCT-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT5","type":"exact"},{"name":"TCP-1-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTM4"}


id: GO:0036503
data:
  {"annotated_genes":["SJAG_00931","SJAG_03153","SJAG_03345","SJAG_01656","SJAG_04384","SJAG_00131","SJAG_02244","SJAG_01134","SJAG_00681","SJAG_04904","SJAG_03841","SJAG_00790","SJAG_05274","SJAG_04583","SJAG_04571","SJAG_01626","SJAG_01585","SJAG_04345","SJAG_01709","SJAG_01051","SJAG_02539","SJAG_00530","SJAG_03657","SJAG_04612","SJAG_03032","SJAG_00403","SJAG_04429","SJAG_00126","SJAG_00766","SJAG_01768","SJAG_02685","SJAG_07000","SJAG_01858","SJAG_02774","SJAG_01854","SJAG_00627","SJAG_00941","SJAG_05022","SJAG_03227","SJAG_02694","SJAG_00948"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83831,85577,85699,85981,87427,88036,88724,89124,89609,90542,90763,91032,93035,93913,94304,96860,99039,99521,100093,100852,100939,101419,103811,104249,104314,105706,108136,109149,109634,109928,111358,111946,112033,112575,112779,113341],"is_not":false,"summary":null,"term":"GO:0036503"},{"annotations":[95955],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904293"},{"annotations":[88980,85296],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[89587,91768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"The protein catabolic pathway which targets endoplasmic reticulum (ER)-resident proteins for degradation by the cytoplasmic proteasome. It begins with recognition of the ER-resident protein, includes retrotranslocation (dislocation) of the protein from the ER to the cytosol, protein modifications necessary for correct substrate transfer (e.g. ubiquitination), transport of the protein to the proteasome, and ends with degradation of the protein by the cytoplasmic proteasome.","definition_xrefs":["GOC:PARL","PMID:21969857","PMID:20940304","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"},{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00131":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00627":null,"SJAG_00681":null,"SJAG_00766":null,"SJAG_00790":null,"SJAG_00931":null,"SJAG_00941":null,"SJAG_00948":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01585":null,"SJAG_01626":null,"SJAG_01656":null,"SJAG_01709":null,"SJAG_01768":null,"SJAG_01854":null,"SJAG_01858":null,"SJAG_02244":null,"SJAG_02539":null,"SJAG_02685":null,"SJAG_02694":null,"SJAG_02774":null,"SJAG_03032":null,"SJAG_03153":null,"SJAG_03227":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03841":null,"SJAG_04345":null,"SJAG_04384":null,"SJAG_04429":null,"SJAG_04571":null,"SJAG_04583":null,"SJAG_04612":null,"SJAG_04904":null,"SJAG_05022":null,"SJAG_05274":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"ERAD pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-associated degradation pathway","type":"related"},{"name":"endoplasmic reticulum-associated degradation","type":"exact"},{"name":"endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"protein degradation by ERAD","type":"exact"}],"termid":"GO:0036503","terms_by_termid":{"GO:0030970":null,"GO:0036503":null,"GO:0097466":null,"GO:1904293":null}}


id: PBO:0030692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_disulfide_level","termid":"PBO:0030692"}


id: FYPO:0005822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NEDD8-specific protease activity (deneddylase activity) is decreased under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased peptidase activity","termid":"FYPO:0000668"},{"relation_name":"is_a","term_name":"abnormal NEDD8-specific protease activity","termid":"FYPO:0005821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased NEDD8-specific protease activity","synonyms":[{"name":"decreased deneddylase activity","type":"exact"},{"name":"reduced NEDD8-specific protease activity","type":"exact"}],"termid":"FYPO:0005822"}


id: GO:0060118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a vestibular receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell development","termid":"GO:0060119"},{"relation_name":"part_of","term_name":"vestibular receptor cell differentiation","termid":"GO:0060114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell development","synonyms":[{"name":"vestibular hair cell development","type":"exact"}],"termid":"GO:0060118"}


id: FYECO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sorbitol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ sorbitol","termid":"FYECO:0000025"}


id: PBO:0027772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tingenone","termid":"PBO:0027772"}


id: PBO:0109940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, spliceosomal Prp43","termid":"PBO:0109940"}


id: GO:0047625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine = L-homoserine lactone + S-methyl-5'-thioadenosine.","definition_xrefs":["RHEA:21932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"S-adenosyl-L-methionine lyase activity","secondary_identifiers":["MetaCyc:ADENOSYLMETHIONINE-CYCLOTRANSFERASE-RXN","EC:4.4.1.42"],"synonyms":[{"name":"S-adenosyl-L-methionine alkyltransferase (cyclizing) activity","type":"related"},{"name":"SAM lyase activity","type":"exact"},{"name":"adenosyl methionine cyclotransferase activity","type":"exact"},{"name":"adenosylmethionine cyclotransferase activity","type":"exact"}],"termid":"GO:0047625"}


id: PBO:0073199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEM1 pseudogene 1","termid":"PBO:0073199"}


id: PBO:0027336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_replication_fork_processing","termid":"PBO:0027336"}


id: GO:0046669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the compound eye retina.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinal cell programmed cell death","termid":"GO:0046668"},{"relation_name":"regulates","term_name":"compound eye retinal cell programmed cell death","termid":"GO:0046667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye retinal cell programmed cell death","synonyms":[{"name":"regulation of retinal cell programmed cell death","type":"broad"}],"termid":"GO:0046669"}


id: PBO:0085164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nudix hydrolase family member with ADP-ribose pyrophosphatase activity; shown to metabolize O-acetyl-ADP-ribose to AMP and acetylated ribose 5'-phosphate","termid":"PBO:0085164"}


id: PBO:0080675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHAMM pseudogene 2","termid":"PBO:0080675"}


id: PBO:0085744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in vesicular transport; mediates transport between an endosomal compartment and the Golgi, contains a Golgi-localization (GRIP) domain that interacts with activated Arl1p-GTP to localize Imh1p to the Golgi","termid":"PBO:0085744"}


id: GO:0050170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-N-peptidyl-L-glutamine + H2O = alpha-N-peptidyl-L-glutamate + NH3.","definition_xrefs":["EC:3.5.1.43","MetaCyc:PEPTIDYL-GLUTAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"peptidyl-glutaminase activity","secondary_identifiers":["RHEA:10032"],"synonyms":[{"name":"peptideglutaminase activity","type":"related"},{"name":"peptidoglutaminase I activity","type":"narrow"},{"name":"peptidoglutaminase activity","type":"related"},{"name":"peptidyl-L-glutamine amidohydrolase activity","type":"related"}],"termid":"GO:0050170"}


id: RO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between between a receptor and an chemical entity, typically a small molecule or peptide, that carries information between cells or compartments of a cell and which binds the receptor and regulates its effector function.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_ligand","termid":"RO:0002019"}


id: GO:1900248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational elongation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation","termid":"GO:1900247"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translation","termid":"GO:2000766"},{"relation_name":"negatively_regulates","term_name":"cytoplasmic translational elongation","termid":"GO:0002182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0002181"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translational elongation","synonyms":[{"name":"down regulation of cytoplasmic translational elongation","type":"exact"},{"name":"down-regulation of cytoplasmic translational elongation","type":"exact"},{"name":"downregulation of cytoplasmic translational elongation","type":"exact"},{"name":"inhibition of cytoplasmic translational elongation","type":"narrow"}],"termid":"GO:1900248"}


id: PBO:0089801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S11","termid":"PBO:0089801"}


id: GO:0047283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichol-phosphate + UDP-D-xylose = dolichyl D-xylosyl phosphate + UDP.","definition_xrefs":["EC:2.4.2.32","MetaCyc:2.4.2.32-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"dolichyl-phosphate D-xylosyltransferase activity","secondary_identifiers":["RHEA:15361"],"synonyms":[{"name":"UDP-D-xylose:dolichyl-phosphate D-xylosyltransferase activity","type":"related"}],"termid":"GO:0047283"}


id: PATO:0002050
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amount which normal.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"present","termid":"PATO:0000467"},{"relation_name":"reciprocal_of","term_name":"has normal numbers of parts of type","termid":"PATO:0001905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"normal amount","synonyms":[{"name":"present in normal numbers in organism","type":"exact"}],"termid":"PATO:0002050"}


id: MOD:01279
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:1443554","PubMed:11283024","Unimod:253#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crotonaldehyde","termid":"MOD:00576"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crotonaldehyde - site H","synonyms":[{"name":"Crotonaldehyde","type":"related"}],"termid":"MOD:01279"}


id: PATO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000897 germ line dependent fertility value (obsolete PATO:0000897)","termid":"PATO:0000897"}


id: GO:0099738
data:
  {"annotated_genes":["SJAG_00028","SJAG_02695","SJAG_00268","SJAG_04690","SJAG_04050","SJAG_02989","SJAG_04982","SJAG_02222","SJAG_01732","SJAG_01277","SJAG_03936","SJAG_00596","SJAG_03596","SJAG_03581","SJAG_02320","SJAG_00807","SJAG_00104","SJAG_04486","SJAG_05285","SJAG_01196","SJAG_04947","SJAG_04375","SJAG_04620","SJAG_02379","SJAG_01360","SJAG_03126","SJAG_04462","SJAG_00185","SJAG_01658","SJAG_01114","SJAG_00700","SJAG_01964","SJAG_03088","SJAG_02831","SJAG_01268","SJAG_04781","SJAG_04724","SJAG_02087","SJAG_01665","SJAG_00279","SJAG_00228","SJAG_02241","SJAG_01167","SJAG_02645","SJAG_00851","SJAG_00514","SJAG_01448","SJAG_03486","SJAG_04498","SJAG_04509","SJAG_04522","SJAG_02700","SJAG_01889","SJAG_02392","SJAG_01143","SJAG_00938","SJAG_00773","SJAG_03705","SJAG_04666","SJAG_04001","SJAG_00216","SJAG_04765","SJAG_03011","SJAG_04901","SJAG_02431","SJAG_00140","SJAG_03025","SJAG_05290","SJAG_00397","SJAG_04566","SJAG_03625","SJAG_03703","SJAG_03119","SJAG_00805","SJAG_02838","SJAG_00845","SJAG_01118","SJAG_03564","SJAG_00152","SJAG_01453","SJAG_00072","SJAG_04771","SJAG_01925","SJAG_03602","SJAG_01787","SJAG_04280","SJAG_03453","SJAG_00661","SJAG_04322","SJAG_02169","SJAG_00118","SJAG_03374","SJAG_01738","SJAG_00030","SJAG_02368","SJAG_01456","SJAG_03379","SJAG_03748","SJAG_01855","SJAG_02166","SJAG_02045","SJAG_04776","SJAG_00663","SJAG_03637","SJAG_03704","SJAG_03655","SJAG_00800","SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94507,95078,112177,99599],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110115"},{"annotations":[91250,87088,109210,114087,89597,99862,85363,100759,86793,106899,110199,86770,110316,97016,108456,107007,103141,93791,94912,108022,85883,95400,92366,102973,106245,98762,83549,84183,102214,112346,99356,83910,107509,92328,86863,90614,96254,89898,91895,112658,91412,104469,95058,98740,107808,99601,95979,93039,87923,84087,103163,87397,99075,99811,114811,91461,109240,83566,84496,92927,95824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051285"},{"annotations":[88433,114812,102215,115009,112659,108101,111981,114088,90615,93267,110317,85884,86771,83911,86742,109211,112347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902716"},{"annotations":[108102,114089,97017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140472"},{"annotations":[115606,115529,89394,115599,115597,115604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990753"},{"annotations":[112351,91900,100762,83919,103743,105559,110322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097575"},{"annotations":[100650,96176],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990463"},{"annotations":[88344,98766,95405,97857,93717,101466,90622,103745,115055,103015,101261,113215,84184,93992,112353,108024,109215,83572,99175,104267,88438,88560,94977,114817,99362,106943,84501,95985,106663,106902,93793,114059,91418,114079,93968,94508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031097"},{"annotations":[97858,100038,104089,114060,96197,97047,114818,93969,108931,93890],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036391"},{"annotations":[86748,94102,89901,88345,101295,112178,92381,84306,84986,95081,96787,88604,97351,102322,113216,94509,114061],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071341"}]},"cv_name":"cellular_component","definition":"The complete extent of cell cortex that underlies some some region of the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex","termid":"GO:0005938"},{"relation_name":"is_a","term_name":"cytoplasmic region","termid":"GO:0099568"}],"gene_count":108,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_00072":null,"SJAG_00104":null,"SJAG_00118":null,"SJAG_00140":null,"SJAG_00152":null,"SJAG_00185":null,"SJAG_00216":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00397":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00663":null,"SJAG_00700":null,"SJAG_00773":null,"SJAG_00800":null,"SJAG_00805":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00938":null,"SJAG_01114":null,"SJAG_01118":null,"SJAG_01143":null,"SJAG_01167":null,"SJAG_01196":null,"SJAG_01268":null,"SJAG_01277":null,"SJAG_01360":null,"SJAG_01448":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01658":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01738":null,"SJAG_01787":null,"SJAG_01855":null,"SJAG_01889":null,"SJAG_01925":null,"SJAG_01964":null,"SJAG_02045":null,"SJAG_02087":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02645":null,"SJAG_02695":null,"SJAG_02700":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03126":null,"SJAG_03374":null,"SJAG_03379":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03602":null,"SJAG_03625":null,"SJAG_03637":null,"SJAG_03655":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03936":null,"SJAG_04001":null,"SJAG_04050":null,"SJAG_04280":null,"SJAG_04322":null,"SJAG_04375":null,"SJAG_04462":null,"SJAG_04486":null,"SJAG_04498":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04566":null,"SJAG_04620":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04703":null,"SJAG_04724":null,"SJAG_04765":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04781":null,"SJAG_04901":null,"SJAG_04947":null,"SJAG_04982":null,"SJAG_05285":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"cell cortex region","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null},"synonyms":[{"name":"perimembrane region","type":"exact"}],"termid":"GO:0099738","terms_by_termid":{"GO:0000085":null,"GO:0031097":null,"GO:0036391":null,"GO:0051285":null,"GO:0051325":null,"GO:0051329":null,"GO:0071341":null,"GO:0097575":null,"GO:0110115":null,"GO:0140472":null,"GO:1902716":null,"GO:1990463":null,"GO:1990753":null}}


id: GO:0043571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in sustaining CRISPR repeat clusters, including capture of new spacer elements, expansion or contraction of clusters, propagation of the leader sequence and repeat clusters within a genome, transfer of repeat clusters and CRISPR-associated (cas) genes to new genomes, transcription of the CRISPR repeat arrays into RNA and processing, and interaction of CRISPR/cas loci with the host genome. CRISPR (clustered regularly interspaced short palindromic repeat) elements are a family of sequence elements containing multiple direct repeats of 24-48 bp with weak dyad symmetry which are separated by regularly sized nonrepetitive spacer sequences.","definition_xrefs":["PMID:16292354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"maintenance of CRISPR repeat elements","synonyms":[{"name":"CRISPR element metabolic process","type":"related"},{"name":"CRISPR element metabolism","type":"related"},{"name":"maintenance of clustered regularly interspaced short palindromic repeat elements","type":"exact"}],"termid":"GO:0043571"}


id: GO:0072325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cellular identity of nematode vulval cells is acquired and determined. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed adult vulva, which is the egg-laying organ of female and hermaphrodite nematodes.","definition_xrefs":["GOC:kmv","ISBN:087969307X","GOC:mah","PMID:11236714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vulval cell fate commitment","termid":"GO:0072325"}


id: PBO:0066837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 136","termid":"PBO:0066837"}


id: PBO:0063942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1","termid":"PBO:0063942"}


id: SO:0001267
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a small noncoding RNA that participates in the processing or chemical modifications of many RNAs, including ribosomal RNAs and spliceosomal RNAs.","direct_ancestors":[{"relation_name":"has_quality","term_name":"snoRNA_encoding","termid":"SO:0000578"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA_gene","synonyms":[{"name":"snoRNA gene","type":"exact"}],"termid":"SO:0001267"}


id: PBO:0067601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 764, pseudogene","termid":"PBO:0067601"}


id: PBO:0071438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 44","termid":"PBO:0071438"}


id: PBO:0056887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake 2","termid":"PBO:0056887"}


id: PATO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000067 relative pilosity (obsolete PATO:0000067)","termid":"PATO:0000067"}


id: GO:0018328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-histidine to form 3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).","definition_xrefs":["RESID:AA0036"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 3'-phospho-L-histidine (obsolete GO:0018328)","termid":"GO:0018328"}


id: GO:0046263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nitrotoluene, any methylbenzene molecule with NO2 group(s) attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrotoluene metabolic process","termid":"GO:0019326"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrotoluene catabolic process","synonyms":[{"name":"nitrotoluene breakdown","type":"exact"},{"name":"nitrotoluene catabolism","type":"exact"},{"name":"nitrotoluene degradation","type":"exact"}],"termid":"GO:0046263"}


id: PBO:0048573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin","termid":"PBO:0048573"}


id: GO:0070432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 2 (NOD2) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070424"},{"relation_name":"regulates","term_name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"regulation of NOD2 signaling pathway","type":"exact"},{"name":"regulation of nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070432"}


id: MOD:01392
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-asparagine residue, and C-4 methylates to form L-asparagine 5-methylthiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0469","PubMed:10625477","PubMed:1880060","PubMed:7844053"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"C-methylated residue","termid":"MOD:00656"},{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine 5-methylthiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,3-bisazanyl-3-oxopropyl]-5-methyl-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S)-1,3-diamino-3-oxopropyl]-5-methyl-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methylthiazole-4-carboxylic acid (Asn-Cys)","type":"exact"},{"name":"L-asparagine 5-methylthiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01392"}


id: GO:0042583
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialized secretory vesicle found in the cells of adrenal glands and various other organs, which is concerned with the synthesis, storage, metabolism, and secretion of epinephrine and norepinephrine.","definition_xrefs":["GOC:jl","PMID:19158310","PMID:1961743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"chromaffin granule","termid":"GO:0042583"}


id: PBO:0068303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 7 pseudogene 1","termid":"PBO:0068303"}


id: PR:Q9US40
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.01 gene.","definition_xrefs":["UniProtKB:Q9US40","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C1039.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.01","synonyms":[{"name":"Spom972h-SPAC1039.01","type":"exact"}],"termid":"PR:Q9US40"}


id: PBO:0064502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLR2D pseudogene 1","termid":"PBO:0064502"}


id: PBO:0063493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 4","termid":"PBO:0063493"}


id: GO:0055045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the antipodal cells undergo programmed cell death.","definition_xrefs":["GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antipodal cell degeneration","termid":"GO:0055045"}


id: PBO:0065887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB35, member RAS oncogene family","termid":"PBO:0065887"}


id: MOD:01581
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01581"}


