# terms

id: PR:000085717
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-36. Example: UniProtKB:P09988, 2-136, Lys-37, MOD:00663.","definition_xrefs":["PMID:37459529","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"has_part","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me(K36)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-37, MOD:00663","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K36Me","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-37, MOD:00663","type":"related"},{"name":"hht1/Me(K36)","type":"exact"}],"termid":"PR:000085717"}


id: PBO:0018059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0018059"}


id: GO:0052150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont gene product affects host apoptosis, leading to a change in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"is_a","term_name":"regulation of killing of cells of another organism","termid":"GO:0051709"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host programmed cell death","termid":"GO:0052040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host apoptosis","secondary_identifiers":["VZ:1518","VZ:1581"],"synonyms":[{"name":"modulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"modulation by symbiont of host apoptosis","type":"narrow"},{"name":"modulation by symbiont of host apoptotic process","type":"exact"},{"name":"modulation by virus of host apoptosis","type":"narrow"},{"name":"regulation by virus of host apoptosis","type":"narrow"}],"termid":"GO:0052150"}


id: PR:000050502
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the dis1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"SPCC736.14","type":"related"},{"name":"Spom-dis1","type":"exact"},{"name":"dis1","type":"related"},{"name":"phosphoprotein p99","type":"exact"}],"termid":"PR:000050502"}


id: GO:0050894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an emotional response is associated with a particular sensory stimulation.","definition_xrefs":["GOC:dph","GOC:ai","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory processing","termid":"GO:0050893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of affect","termid":"GO:0050894"}


id: GO:0099572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins within and adjacent to the postsynaptic membrane. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["PMID:22046028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle","termid":"GO:0043226"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization","termid":"GO:0099572"}


id: GO:0098538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the transport vesicle membrane that faces the lumen.","definition_xrefs":["GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"transport vesicle membrane","termid":"GO:0030658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lumenal side of transport vesicle membrane","synonyms":[{"name":"internal side of transport vesicle membrane","type":"exact"}],"termid":"GO:0098538"}


id: PBO:0078593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 6, Y-linked","termid":"PBO:0078593"}


id: PR:Q09918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3105 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3105 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.06","synonyms":[{"name":"Spom972h-hsp3105","type":"exact"},{"name":"glyoxalase 3 homolog 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09918"}


id: PBO:0085179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of several homologs of bacterial chaperone DnaJ; located in the ER lumen where it cooperates with Kar2p to mediate maturation of proteins","termid":"PBO:0085179"}


id: PBO:0054429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1825","termid":"PBO:0054429"}


id: PBO:0064872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26 pseudogene 5","termid":"PBO:0064872"}


id: FYPO:0000485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"},{"relation_name":"is_a","term_name":"decreased DNA recombination","termid":"FYPO:0002712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"decreased meiotic recombination","synonyms":[{"name":"meiotic recombination: decreased","type":"related"},{"name":"reduced meiotic recombination","type":"exact"}],"termid":"FYPO:0000485"}


id: PBO:0039350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylmethionine decarboxylase 1","termid":"PBO:0039350"}


id: GO:0039549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the rate or extent of the phosphorylation of IRF3 (interferon regulatory factor-3), thereby inhibiting IRF3 activation. In response to signaling from RIG-1/MDA-5 receptors, IRF3 is phosphorylated on multiple serine and threonine residues; phosphorylation results in the cytoplasm-to-nucleus translocation of IRF3, DNA binding, and increased transcriptional activation of interferon-encoding genes.","definition_xrefs":["PMID:9566918","PMID:20631144","PMID:11124948","PMID:12829834"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF3 activity by inhibition of IRF3 phosphorylation (obsolete GO:0039549)","synonyms":[{"name":"inhibition of phosphorylation-induced activation of host IRF3","type":"related"},{"name":"inhibition of virus-induced IRF-3 phosphorylation","type":"broad"}],"termid":"GO:0039549"}


id: PBO:0047331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamin binding LIM protein 1","termid":"PBO:0047331"}


id: GO:0051235
data:
  {"annotated_genes":["SJAG_04059","SJAG_01738","SJAG_04221","SJAG_03170","SJAG_03850","SJAG_01116","SJAG_01993","SJAG_01537","SJAG_01180","SJAG_04041","SJAG_01001","SJAG_00321","SJAG_04982","SJAG_03609","SJAG_04049","SJAG_00661","SJAG_01017","SJAG_00368","SJAG_03162","SJAG_02980","SJAG_01906","SJAG_00053","SJAG_04867","SJAG_00030","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006880"},{"annotations":[108219,110354,90697,92778,107137,115062,84802],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140042"},{"annotations":[115691,87483,105872,108220,86066,110355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019915"},{"annotations":[86439,100498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[102710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[100771,96262,90068,107012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[88155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"},{"annotations":[89419],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051209"},{"annotations":[104805],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061454"},{"annotations":[93798,110490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"},{"annotations":[111376,103157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which a cell, substance or cellular entity, such as a protein complex or organelle, is maintained in a location and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00053":null,"SJAG_00321":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01116":null,"SJAG_01180":null,"SJAG_01537":null,"SJAG_01738":null,"SJAG_01906":null,"SJAG_01993":null,"SJAG_02763":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03170":null,"SJAG_03609":null,"SJAG_03850":null,"SJAG_04041":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04221":null,"SJAG_04867":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of location","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26774782":null},"synonyms":[{"name":"maintenance of localization","type":"exact"},{"name":"retention","type":"narrow"},{"name":"sequestering","type":"narrow"},{"name":"storage","type":"narrow"}],"termid":"GO:0051235","terms_by_termid":{"GO:0006621":null,"GO:0006880":null,"GO:0019915":null,"GO:0032065":null,"GO:0042989":null,"GO:0051209":null,"GO:0051685":null,"GO:0061454":null,"GO:0097248":null,"GO:0140042":null,"GO:1990854":null}}


id: GO:0003351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of cilia of epithelial cells. Depending on the type of cell, there may be one or many cilia per cell. This movement is usually coordinated between many epithelial cells, and serves to move extracellular fluid.","definition_xrefs":["GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium movement","termid":"GO:0003341"},{"relation_name":"is_a","term_name":"extracellular transport","termid":"GO:0006858"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"epithelial cilium movement involved in extracellular fluid movement","synonyms":[{"name":"cilium movement involved in fluid flow","type":"related"},{"name":"epithelial cilium beating","type":"related"}],"termid":"GO:0003351"}


id: PBO:0053797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1052","termid":"PBO:0053797"}


id: PBO:0086763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; S288C contains an in-frame stop codon between ORFs YLR030W and YLR031W; YLR031W has a paralog, YMR124W, that arose from the whole genome duplication","termid":"PBO:0086763"}


id: GO:0006165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into a nucleoside diphosphate to produce a nucleoside triphosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoside diphosphate phosphorylation (obsolete GO:0006165)","termid":"GO:0006165"}


id: PBO:0017478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-coincident_with","termid":"PBO:0017478"}


id: PBO:0061106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family CARD domain containing 4","termid":"PBO:0061106"}


id: PBO:0087745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; SWI/SNF regulates transcription by remodeling chromosomes; contains SANT domain that is required for SWI/SNF assembly; is essential for displacement of histone H2A-H2B dimers during ATP-dependent remodeling; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087745"}


id: FYPO:0004406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing JM335.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on JM335","synonyms":[{"name":"normal cell population growth in presence of JM335","type":"exact"},{"name":"normal cell population growth on JM335","type":"exact"},{"name":"normal cellular response to JM335","type":"related"},{"name":"normal vegetative cell population growth on JM335","type":"exact"}],"termid":"FYPO:0004406"}


id: PBO:0052584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 2","termid":"PBO:0052584"}


id: PBO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain","termid":"PBO:0000352"}


id: MOD:01101
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because erroneous and apparently redundant to MOD:00111. Remap to MOD:00111.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01101 S-Farnesyl- (obsolete MOD:01101)","termid":"MOD:01101"}


id: PR:O94472
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pbn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.02","synonyms":[{"name":"Spom972h-SPCC1919.02","type":"exact"}],"termid":"PR:O94472"}


id: PBO:0073524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 binding domain protein 5 like","termid":"PBO:0073524"}


id: PBO:0085717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in SRP-independent targeting of substrates to the ER; component of an alternative ER targeting pathway that has partial functional redundancy with the GET pathway; preference for substrates with downstream transmembrane domains; interacts with Snd1p, Pho88p/Snd3p and Sec61p-translocon subunits; can compensate for loss of SRP; role in the late endosome-vacuole interface; putative role in secretory protein quality control","termid":"PBO:0085717"}


id: PBO:0031260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_late_endosome_to_vacuole_transport","termid":"PBO:0031260"}


id: PBO:0039099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 3","termid":"PBO:0039099"}


id: PBO:0087614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; required for chromosome condensation and for clustering of tRNA genes at the nucleolus; may influence multiple aspects of chromosome transmission","termid":"PBO:0087614"}


id: MOD:00754
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a bromine atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brominated residue","synonyms":[{"name":"BrRes","type":"exact"}],"termid":"MOD:00754"}


id: PBO:0059110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOS proto-oncogene, serine/threonine kinase","termid":"PBO:0059110"}


id: GO:0015049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methane + NAD(P)H + H+ + O2 = methanol + NAD(P)+ + H2O.","definition_xrefs":["EC:1.14.13.25","PMID:10896210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"methane monooxygenase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:METHANE-MONOOXYGENASE-RXN","UM-BBD_enzymeID:r0237"],"synonyms":[{"name":"methane hydroxylase activity","type":"related"},{"name":"methane,NAD(P)H:oxygen oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0015049"}


id: PBO:0108555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor Cdt1","termid":"PBO:0108555"}


id: GO:1990961
data:
  {"annotated_genes":["SJAG_03363","SJAG_03951","SJAG_01145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92556,113209,114140],"is_not":false,"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"A process that reduces or removes the toxicity of a xenobiotic by exporting it outside the cell.","definition_xrefs":["PMID:28355133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic export from cell","termid":"GO:0046618"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"},{"relation_name":"part_of","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"part_of","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0098754","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"xenobiotic detoxification by transmembrane export across the plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"drug transmembrane export","type":"narrow"}],"termid":"GO:1990961","terms_by_termid":{"GO:1990961":null}}


id: PBO:0071645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 9","termid":"PBO:0071645"}


id: PBO:0028621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U2-type_prespliceosome_assembly","termid":"PBO:0028621"}


id: PBO:0111382
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentameric","termid":"PBO:0111382"}


id: PBO:0061197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide associated 1","termid":"PBO:0061197"}


id: GO:1990813
data:
  {"annotated_genes":["SJAG_00600","SJAG_04259","SJAG_01082","SJAG_03926","SJAG_00229","SJAG_01601","SJAG_03681","SJAG_03989","SJAG_01805","SJAG_04126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89840,95211,97365,97888,100620,103960,109393,109950,110662,112077],"is_not":false,"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome centromeric region is maintained during homologous chromosome segregation at meiotic anaphase I after cohesin is cleaved by separase along the arm regions.","definition_xrefs":["PMID:14730319","PMID:25533956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"meiotic centromeric cohesion protection in anaphase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"anaphase cohesion protection","type":"exact"},{"name":"protection of centromeric cohesion during meiotic anaphase I","type":"exact"}],"termid":"GO:1990813","terms_by_termid":{"GO:1990813":null}}


id: FYPO:0004068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 5 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal.","definition_xrefs":["GO:0071620","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during vegetative growth","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during mitotic cell cycle","type":"related"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 5 residues during vegetative growth","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0004068"}


id: GO:0110074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apical constriction involved in ventral furrow formation.","definition_xrefs":["PMID:28495958","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apical constriction involved in ventral furrow formation","termid":"GO:0110073"},{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"positively_regulates","term_name":"apical constriction involved in ventral furrow formation","termid":"GO:0110072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apical constriction involved in ventral furrow formation","termid":"GO:0110074"}


id: PBO:0080552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 11","termid":"PBO:0080552"}


id: PBO:0070775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 5","termid":"PBO:0070775"}


id: PBO:0039511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B","termid":"PBO:0039511"}


id: PBO:0031649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cellular_respiration","termid":"PBO:0031649"}


id: GO:0004713
data:
  {"annotated_genes":["SJAG_00718","SJAG_03854","SJAG_00996","SJAG_02104","SJAG_04457","SJAG_04980","SJAG_04280","SJAG_00402","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85687,88190,89931,96293,99050,106336,107133,107723,112189],"is_not":false,"summary":null,"term":"GO:0004713"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.","definition_xrefs":["RHEA:10596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00402":null,"SJAG_00718":null,"SJAG_00996":null,"SJAG_01181":null,"SJAG_02104":null,"SJAG_03854":null,"SJAG_04280":null,"SJAG_04457":null,"SJAG_04980":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0004672","GO:0016740","GO:0016301","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein tyrosine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-372693","Reactome:R-HSA-9762209","Reactome:R-HSA-9612996","Reactome:R-HSA-9831136","Reactome:R-HSA-8849102","Reactome:R-HSA-1963586","Reactome:R-HSA-2197698","Reactome:R-HSA-9034875","Reactome:R-HSA-2023460","Reactome:R-HSA-210291","Reactome:R-HSA-5218851","Reactome:R-HSA-202165","Reactome:R-HSA-8848436","Reactome:R-HSA-5624486","Reactome:R-HSA-9700647","Reactome:R-HSA-1295609","Reactome:R-HSA-445085","Reactome:R-HSA-9700168","Reactome:R-HSA-9613023","Reactome:R-HSA-9669911","Reactome:R-HSA-170991","Reactome:R-HSA-202248","Reactome:R-HSA-2424486","Reactome:R-HSA-418163","Reactome:R-HSA-5654575","Reactome:R-HSA-68954","Reactome:R-HSA-8853309","Reactome:R-HSA-9664976","Reactome:R-HSA-177937","Reactome:R-HSA-8848758","Reactome:R-HSA-9712085","Reactome:R-HSA-8874082","Reactome:R-HSA-5654628","Reactome:R-HSA-9027425","Reactome:R-HSA-354073","Reactome:R-HSA-5621363","Reactome:R-HSA-171011","Reactome:R-HSA-5218806","Reactome:R-HSA-5654578","Reactome:R-HSA-2038944","Reactome:R-HSA-2454208","Reactome:R-HSA-8848975","Reactome:R-HSA-9625487","Reactome:R-HSA-2586553","Reactome:R-HSA-9673761","Reactome:R-HSA-183058","Reactome:R-HSA-2454239","Reactome:R-HSA-2730833","Reactome:R-HSA-4420206","Reactome:R-HSA-9674567","Reactome:R-HSA-391156","Reactome:R-HSA-2029984","Reactome:R-HSA-8853325","Reactome:R-HSA-9672175","Reactome:R-HSA-380780","Reactome:R-HSA-388833","Reactome:R-HSA-9706350","Reactome:R-HSA-983707","Reactome:R-HSA-879909","Reactome:R-HSA-418859","Reactome:R-HSA-8876948","Reactome:R-HSA-445084","Reactome:R-HSA-5654147","Reactome:R-HSA-1839067","Reactome:R-HSA-1888198","Reactome:R-HSA-3215391","Reactome:R-HSA-8848005","Reactome:R-HSA-9021609","Reactome:R-HSA-190427","Reactome:R-HSA-8876230","Reactome:R-HSA-9006323","Reactome:R-HSA-909718","Reactome:R-HSA-5654634","Reactome:R-HSA-9703438","Reactome:R-HSA-1472121","Reactome:R-HSA-202291","Reactome:R-HSA-202216","Reactome:R-HSA-2029453","Reactome:R-HSA-354124","Reactome:R-HSA-5218642","Reactome:R-HSA-205289","Reactome:R-HSA-1982066","Reactome:R-HSA-9029155","Reactome:R-HSA-9665704","Reactome:R-HSA-9027273","Reactome:R-HSA-8964242","Reactome:R-HSA-1433488","Reactome:R-HSA-9712082","Reactome:R-HSA-1839065","Reactome:R-HSA-5654587","Reactome:R-HSA-8875451","Reactome:R-HSA-9026510","Reactome:R-HSA-9664588","Reactome:R-HSA-983703","Reactome:R-HSA-5683930","Reactome:R-HSA-2012082","Reactome:R-HSA-174164","Reactome:R-HSA-419646","Reactome:R-HSA-182969","Reactome:R-HSA-6790087","Reactome:R-HSA-2023455","Reactome:R-HSA-2730858","Reactome:R-HSA-1839110","Reactome:R-HSA-5621355","Reactome:R-HSA-9604767","Reactome:R-HSA-5654149","Reactome:R-HSA-9034714","Reactome:R-HSA-2395801","Reactome:R-HSA-9664275","Reactome:R-HSA-389083","Reactome:R-HSA-5654222","Reactome:R-HSA-9700186","Reactome:R-HSA-9012650","Reactome:R-HSA-9029151","Reactome:R-HSA-9709918","Reactome:R-HSA-8964252","Reactome:R-HSA-190413","Reactome:R-HSA-2012073","Reactome:R-HSA-1248694","Reactome:R-HSA-4420117","Reactome:R-HSA-3928610","Reactome:R-HSA-2424487","Reactome:R-HSA-5654428","Reactome:R-HSA-429441","Reactome:R-HSA-8937844","Reactome:R-HSA-9028728","Reactome:R-HSA-9037040","Reactome:R-HSA-2029449","Reactome:R-HSA-9026890","Reactome:R-HSA-8849068","Reactome:R-HSA-5654605","Reactome:R-HSA-1963582","Reactome:R-HSA-1225960","Reactome:R-HSA-5654397","Reactome:R-HSA-8853313","Reactome:R-HSA-9032426","Reactome:R-HSA-1168394","Reactome:R-HSA-8857577","Reactome:R-HSA-9665032","Reactome:R-HSA-9669890","Reactome:R-HSA-373750","Reactome:R-HSA-374701","Reactome:R-HSA-451942","Reactome:R-HSA-9034814","Reactome:R-HSA-9699578","Reactome:R-HSA-1671691","Reactome:R-HSA-1963581","Reactome:R-HSA-909730","Reactome:R-HSA-2038387","Reactome:R-HSA-2033490","Reactome:R-HSA-1169421","Reactome:R-HSA-3928604","Reactome:R-HSA-4093332","Reactome:R-HSA-3928578","Reactome:R-HSA-6806974","Reactome:R-HSA-391866","Reactome:R-HSA-445091","Reactome:R-HSA-389159","Reactome:R-HSA-873919","Reactome:R-HSA-8876246","Reactome:R-HSA-9624014","Reactome:R-HSA-9664261","Reactome:R-HSA-2404193","Reactome:R-HSA-8867041","Reactome:R-HSA-2029459","Reactome:R-HSA-2201322","Reactome:R-HSA-1524186","Reactome:R-HSA-8857555","Reactome:R-HSA-9673756","Reactome:R-HSA-1250348","Reactome:R-HSA-5218809","Reactome:R-HSA-5655270","Reactome:R-HSA-9733314","Reactome:R-HSA-5218830","Reactome:R-HSA-9700193","Reactome:R-HSA-1250195","Reactome:R-HSA-9666425","Reactome:R-HSA-9672173","Reactome:R-HSA-190385","Reactome:R-HSA-399947","Reactome:R-HSA-8851890","Reactome:R-HSA-9700181","Reactome:R-HSA-8848818","Reactome:R-HSA-389762","Reactome:R-HSA-9674558","Reactome:R-HSA-5655284","Reactome:R-HSA-8851933","EC:2.7.10.-","Reactome:R-HSA-1433506","Reactome:R-HSA-373747","Reactome:R-HSA-9606159","Reactome:R-HSA-8848873","Reactome:R-HSA-3928583","Reactome:R-HSA-9703437","Reactome:R-HSA-9700175","Reactome:R-HSA-9006332","Reactome:R-HSA-5654545","Reactome:R-HSA-2671850","Reactome:R-HSA-8937728","Reactome:R-HSA-8849032","Reactome:R-HSA-8983872","Reactome:R-HSA-2396594","Reactome:R-HSA-212710","Reactome:R-HSA-5218820","Reactome:R-HSA-2424484","Reactome:R-HSA-112333","Reactome:R-HSA-2730886","Reactome:R-HSA-5655243","Reactome:R-HSA-9726848","Reactome:R-HSA-2730843","Reactome:R-HSA-9032601","Reactome:R-HSA-9606162","Reactome:R-HSA-1248655","Reactome:R-HSA-429449","Reactome:R-HSA-389354","Reactome:R-HSA-9027272","Reactome:R-HSA-879925","Reactome:R-HSA-1433542","Reactome:R-HSA-432129","Reactome:R-HSA-3928580","Reactome:R-HSA-5654607","Reactome:R-HSA-1295540","Reactome:R-HSA-399934","Reactome:R-HSA-445076","Reactome:R-HSA-9024726","Reactome:R-HSA-9712087","Reactome:R-HSA-2730884","Reactome:R-HSA-2033486","Reactome:R-HSA-9665709","Reactome:R-HSA-9026464","Reactome:R-HSA-9026502","Reactome:R-HSA-190429","GO:0004718","Reactome:R-HSA-909729","Reactome:R-HSA-190326","Reactome:R-HSA-9680248","Reactome:R-HSA-9698005","Reactome:R-HSA-2395439","Reactome:R-HSA-2029268","Reactome:R-HSA-8847977","Reactome:R-HSA-9706344","Reactome:R-HSA-190408","Reactome:R-HSA-191062","Reactome:R-HSA-8848606","Reactome:R-HSA-879907","Reactome:R-HSA-2033488","Reactome:R-HSA-399946","Reactome:R-HSA-202233","Reactome:R-HSA-5218812","Reactome:R-HSA-9634390","Reactome:R-HSA-5637796","Reactome:R-HSA-5357429","MetaCyc:2.7.10.1-RXN","Reactome:R-HSA-202307","Reactome:R-HSA-3928648","Reactome:R-HSA-1839112","Reactome:R-HSA-2012087","Reactome:R-HSA-452122","Reactome:R-HSA-5218828","Reactome:R-HSA-8855237","Reactome:R-HSA-2671829","Reactome:R-HSA-5690702","Reactome:R-HSA-202168","Reactome:R-HSA-8948143","Reactome:R-HSA-2671742","Reactome:R-HSA-2730888","Reactome:R-HSA-5654631","Reactome:R-HSA-9701488","Reactome:R-HSA-1250315","Reactome:R-HSA-186786","Reactome:R-HSA-9665411","Reactome:R-HSA-9733323","Reactome:R-HSA-9018572","Reactome:R-HSA-2730882","Reactome:R-HSA-9670418","Reactome:R-HSA-8848124","Reactome:R-HSA-391871","Reactome:R-HSA-873924","Reactome:R-HSA-9011241","Reactome:R-HSA-2130194","Reactome:R-HSA-5607750","Reactome:R-HSA-9032854","Reactome:R-HSA-377640","Reactome:R-HSA-1307963","Reactome:R-HSA-388831","Reactome:R-HSA-434836","Reactome:R-HSA-508282","Reactome:R-HSA-8875817","Reactome:R-HSA-5637795","Reactome:R-HSA-8857925","Reactome:R-HSA-8848077","Reactome:R-HSA-9033284","Reactome:R-HSA-5655301","Reactome:R-HSA-8857583","Reactome:R-HSA-9606163","Reactome:R-HSA-873918","Reactome:R-HSA-9612085","Reactome:R-HSA-5218640","Reactome:R-HSA-1247844","Reactome:R-HSA-2730862","Reactome:R-HSA-5686587","Reactome:R-HSA-9603420","Reactome:R-HSA-9670412","Reactome:R-HSA-2730851","Reactome:R-HSA-389086","Reactome:R-HSA-190388","Reactome:R-HSA-443817","Reactome:R-HSA-5607745","Reactome:R-HSA-9698003","Reactome:R-HSA-8956659","Reactome:R-HSA-8848726","Reactome:R-HSA-9695834","Reactome:R-HSA-9665705","Reactome:R-HSA-5654407","Reactome:R-HSA-5654653","Reactome:R-HSA-6784006","Reactome:R-HSA-1470009","Reactome:R-HSA-9032532","Reactome:R-HSA-9664278","Reactome:R-HSA-1839098","Reactome:R-HSA-2404199","Reactome:R-HSA-114600","Reactome:R-HSA-3928594","Reactome:R-HSA-873922","Reactome:R-HSA-170070","Reactome:R-HSA-8849042","Reactome:R-HSA-9700164","Reactome:R-HSA-1433418","Reactome:R-HSA-4420121","Reactome:R-HSA-5654582","Reactome:R-HSA-202245","Reactome:R-HSA-2029989","Reactome:R-HSA-9026579","Reactome:R-HSA-170156","Reactome:R-HSA-2395412","Reactome:R-HSA-452100","Reactome:R-HSA-5654408","Reactome:R-HSA-983709","Reactome:R-HSA-2586555","Reactome:R-HSA-210872","Reactome:R-HSA-5655278","Reactome:R-HSA-9700171","Reactome:R-HSA-5621370","Reactome:R-HSA-5654151","Reactome:R-HSA-8874078","Reactome:R-HSA-177934","Reactome:R-HSA-9712086","Reactome:R-HSA-3928627","Reactome:R-HSA-4420128","Reactome:R-HSA-8874080","Reactome:R-HSA-5655341","Reactome:R-HSA-1225952","Reactome:R-HSA-912629","Reactome:R-HSA-428888","Reactome:R-HSA-452097","Reactome:R-HSA-6784319","Reactome:R-HSA-201521","Reactome:R-HSA-69195","Reactome:R-HSA-5654655","Reactome:R-HSA-2428926","Reactome:R-HSA-5655268","Reactome:R-HSA-418872","Reactome:R-HSA-202174","Reactome:R-HSA-2730860","Reactome:R-HSA-1433454","Reactome:R-HSA-2033485","Reactome:R-HSA-391865","Reactome:R-HSA-8849463","Reactome:R-HSA-8942607","Reactome:R-HSA-8937807","Reactome:R-HSA-909732","Reactome:R-HSA-9665389","Reactome:R-HSA-982807","Reactome:R-HSA-1251922","Reactome:R-HSA-8848776","Reactome:R-HSA-909726","Reactome:R-HSA-9732738","Reactome:R-HSA-191636","Reactome:R-HSA-5654418"],"synonyms":[{"name":"protein-tyrosine kinase activity","type":"exact"}],"termid":"GO:0004713","terms_by_termid":{"GO:0004713":null}}


id: GO:2001317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of kojic acid.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"kojic acid metabolic process","termid":"GO:2001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"kojic acid biosynthetic process","synonyms":[{"name":"kojic acid formation","type":"exact"},{"name":"kojic acid synthesis","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"C6H6O4 anabolism","type":"related"},{"name":"C6H6O4 biosynthesis","type":"related"},{"name":"C6H6O4 biosynthetic process","type":"related"},{"name":"C6H6O4 formation","type":"related"},{"name":"C6H6O4 synthesis","type":"related"},{"name":"kojic acid anabolism","type":"exact"},{"name":"kojic acid biosynthesis","type":"exact"}],"termid":"GO:2001317"}


id: GO:0015358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete amino acid/choline transmembrane transporter activity (obsolete GO:0015358)","synonyms":[{"name":"amino acid/choline transmembrane transporter activity","type":"exact"}],"termid":"GO:0015358"}


id: PBO:0113264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide binding protein; required for vesicle formation in autophagy and the cytoplasm-to-vacuole targeting (CVT) pathway; binds PtdIns(3,5)P2, PI3P and PI4P; WD-40 repeat-containing protein and PROPPIN family member; relocalizes from the vacuole to cytoplasm upon replication stress; forms higher order helical assemblies; mammalian homologs include: WIPI1, WIPI2, WIPI3 and WDR45; human WDR45 mutations cause static encephalopathy of childhood with neurodegeneration in adulthood (SENDA)","termid":"PBO:0113264"}


id: GO:0071713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: para-aminobenzoyl-glutamate + H2O = para-aminobenzoate + L-glutamate.","definition_xrefs":["PMID:20190044","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"para-aminobenzoyl-glutamate hydrolase activity","termid":"GO:0071713"}


id: PBO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forms a polar gradient","termid":"PBO:0000437"}


id: PBO:0082908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine desulfurase involved in iron-sulfur cluster biogenesis; required for thio-modification of mitochondrial and cytoplasmic tRNAs; involved in DNA damage response by providing Fe–S cluster cofactors for DNA repair enzymes; essential protein located predominantly in mitochondria","termid":"PBO:0082908"}


id: GO:1903344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein polyglycylation.","definition_xrefs":["GOC:sart","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein polyglycylation","termid":"GO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein polyglycylation","termid":"GO:1903344"}


id: GO:0043839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosylmethionine (SAM) to the 1-phosphate group of lipid A.","definition_xrefs":["PMID:15994324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"lipid A phosphate methyltransferase activity","synonyms":[{"name":"LmtA","type":"related"},{"name":"lipid A 1-phosphomethyltransferase activity","type":"exact"},{"name":"lipid A methyltransferase","type":"broad"},{"name":"lipid A phosphomethyltransferase activity","type":"exact"}],"termid":"GO:0043839"}


id: MOD:00509
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:141","PubMed:12643539","PubMed:6273432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidination of lysines or N-terminal amines with methyl acetimidate","synonyms":[{"name":"Amidine","type":"related"},{"name":"amidination of lysines or N-terminal amines with methyl acetimidate","type":"related"}],"termid":"MOD:00509"}


id: GO:0102445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5,7-tetrahydroxy-3-methoxyflavone + S-adenosyl-L-methionine = 3,3'-O-dimethylquercetin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"3-methylquercetin 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13930"],"termid":"GO:0102445"}


id: PBO:0058969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKX antisense RNA 1","termid":"PBO:0058969"}


id: GO:0018907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethyl sulfoxide, DMSO (C2H6OS), an alkyl sulfoxide that is practically odorless in its purified form. As a highly polar organic liquid, it is a powerful solvent. Its biological activities include the ability to penetrate plant and animal tissues and to preserve living cells during freezing.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"dimethyl sulfoxide metabolic process","secondary_identifiers":["UM-BBD_pathwayID:sulf"],"synonyms":[{"name":"DMSO metabolic process","type":"exact"},{"name":"DMSO metabolism","type":"exact"},{"name":"dimethyl sulfoxide metabolism","type":"exact"},{"name":"dimethyl sulphoxide metabolic process","type":"exact"},{"name":"dimethyl sulphoxide metabolism","type":"exact"}],"termid":"GO:0018907"}


id: FYPO:0000456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone acetylation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"},{"relation_name":"is_a","term_name":"abnormal protein acetylation during vegetative growth","termid":"FYPO:0002392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone acetylation during vegetative growth","synonyms":[{"name":"abnormal histone acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000456"}


id: GO:1904650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fat cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17024416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of fat cell apoptotic process","termid":"GO:1904649"},{"relation_name":"negatively_regulates","term_name":"fat cell apoptotic process","termid":"GO:1904606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fat cell apoptotic process","synonyms":[{"name":"down regulation of adipocyte apoptosis","type":"narrow"},{"name":"down regulation of adipocyte apoptotic process","type":"exact"},{"name":"down regulation of adipose cell apoptosis","type":"narrow"},{"name":"down regulation of adipose cell apoptotic process","type":"exact"},{"name":"down regulation of fat cell apoptosis","type":"narrow"},{"name":"down regulation of fat cell apoptotic process","type":"exact"},{"name":"down-regulation of adipocyte apoptosis","type":"narrow"},{"name":"down-regulation of adipocyte apoptotic process","type":"exact"},{"name":"down-regulation of adipose cell apoptosis","type":"narrow"},{"name":"down-regulation of adipose cell apoptotic process","type":"exact"},{"name":"down-regulation of fat cell apoptosis","type":"narrow"},{"name":"down-regulation of fat cell apoptotic process","type":"exact"},{"name":"downregulation of adipocyte apoptosis","type":"narrow"},{"name":"downregulation of adipocyte apoptotic process","type":"exact"},{"name":"downregulation of adipose cell apoptosis","type":"narrow"},{"name":"downregulation of adipose cell apoptotic process","type":"exact"},{"name":"downregulation of fat cell apoptosis","type":"narrow"},{"name":"downregulation of fat cell apoptotic process","type":"exact"},{"name":"inhibition of adipocyte apoptosis","type":"narrow"},{"name":"inhibition of adipocyte apoptotic process","type":"narrow"},{"name":"inhibition of adipose cell apoptosis","type":"narrow"},{"name":"inhibition of adipose cell apoptotic process","type":"narrow"},{"name":"inhibition of fat cell apoptosis","type":"narrow"},{"name":"inhibition of fat cell apoptotic process","type":"narrow"},{"name":"negative regulation of adipocyte apoptosis","type":"narrow"},{"name":"negative regulation of adipocyte apoptotic process","type":"exact"},{"name":"negative regulation of adipose cell apoptosis","type":"narrow"},{"name":"negative regulation of adipose cell apoptotic process","type":"exact"},{"name":"negative regulation of fat cell apoptosis","type":"narrow"}],"termid":"GO:1904650"}


id: GO:0061497
data:
  {"annotated_genes":["SJAG_05196","SJAG_02609","SJAG_02332","SJAG_01215","SJAG_07018","SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97072,98915,104979,105743,106723,107581],"is_not":false,"summary":null,"term":"GO:0061497"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the inner plaque is in the nucleus.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner plaque of spindle pole body","termid":"GO:0005822"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02332":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_05196":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"inner plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061497","terms_by_termid":{"GO:0061497":null}}


id: PBO:0111816
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT family","termid":"PBO:0111816"}


id: PBO:0064780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1A pseudogene 1","termid":"PBO:0064780"}


id: SO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby two genes, on alternate strands have become joined.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_fusion","termid":"SO:0001565"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional_gene_fusion","synonyms":[{"name":"bidirectional gene fusion","type":"exact"}],"termid":"SO:0002086"}


id: GO:0010423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of brassinosteroids.","definition_xrefs":["PMID:16857903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of brassinosteroid biosynthetic process","termid":"GO:0010422"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"},{"relation_name":"negatively_regulates","term_name":"brassinosteroid biosynthetic process","termid":"GO:0016132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of brassinosteroid biosynthetic process","termid":"GO:0010423"}


id: GO:0051036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle size","termid":"GO:0097494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endosome size","synonyms":[{"name":"endosome enlargement","type":"related"}],"termid":"GO:0051036"}


id: GO:1903225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endodermal cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23154389","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of endodermal cell differentiation","termid":"GO:1903224"},{"relation_name":"negatively_regulates","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endodermal cell differentiation","synonyms":[{"name":"down regulation of endoderm cell differentiation","type":"exact"},{"name":"down regulation of endodermal cell differentiation","type":"exact"},{"name":"down-regulation of endoderm cell differentiation","type":"exact"},{"name":"down-regulation of endodermal cell differentiation","type":"exact"},{"name":"downregulation of endoderm cell differentiation","type":"exact"},{"name":"downregulation of endodermal cell differentiation","type":"exact"},{"name":"inhibition of endoderm cell differentiation","type":"narrow"},{"name":"inhibition of endodermal cell differentiation","type":"narrow"},{"name":"negative regulation of endoderm cell differentiation","type":"exact"}],"termid":"GO:1903225"}


id: PBO:0015707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated ATP-dependent RNA helicase Prp28 (predicted)","termid":"PBO:0015707"}


id: PATO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having reacted with oxygen, or been modified by oxidation (the reaction in which the atoms of an element lose electrons and the valence of the element increases).","definition_xrefs":["Wikipedia:http://en.wiktionary.org/wiki/oxidized"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized","termid":"PATO:0002223"}


id: PBO:0086895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of the sugar porter family","termid":"PBO:0086895"}


id: GO:0046462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monoacylglycerol, any ester of glycerol in which any one of its hydroxyl groups has been acylated with a fatty acid, the other being non-esterified.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"monoacylglycerol metabolic process","synonyms":[{"name":"monoacylglycerol metabolism","type":"exact"},{"name":"monoglyceride metabolic process","type":"exact"},{"name":"monoglyceride metabolism","type":"exact"}],"termid":"GO:0046462"}


id: GO:0060239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of signal transduction involved in conjugation with cellular fusion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"is_a","term_name":"regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060238"},{"relation_name":"positively_regulates","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000747","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060239"}


id: GO:0003131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from mesodermal cells to endodermal cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesodermal-endodermal cell signaling","synonyms":[{"name":"mesodermal-endodermal cell signalling","type":"exact"}],"termid":"GO:0003131"}


id: FYPO:0002212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that is curved along the long axis, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated, curved germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, elongated, curved cell","type":"exact"},{"name":"inviable following spore germination with elongated, curved germ tube","type":"exact"},{"name":"inviable germinated spore, without cell division, with elongated, curved germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated, curved germ tube","type":"exact"}],"termid":"FYPO:0002212"}


id: GO:0032473
data:
  {"annotated_genes":["SJAG_05268","SJAG_01134","SJAG_00368","SJAG_01312","SJAG_03345","SJAG_03464","SJAG_04732","SJAG_00605","SJAG_00948"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85285,95341,96612,98610,100584,100933,101925,102704,111943],"is_not":false,"summary":null,"term":"GO:0032473"}]},"cv_name":"cellular_component","definition":"The external (cytoplasmic) face of the mitochondrial outer membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"mitochondrial outer membrane","termid":"GO:0005741"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00605":null,"SJAG_00948":null,"SJAG_01134":null,"SJAG_01312":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_04732":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytosolic side of mitochondrial outer membrane","type":"exact"},{"name":"external leaflet of mitochondrial outer membrane","type":"exact"},{"name":"external side of mitochondrial envelope","type":"related"},{"name":"external side of mitochondrial outer membrane","type":"exact"}],"termid":"GO:0032473","terms_by_termid":{"GO:0032473":null}}


id: PBO:0079251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC23 antisense RNA 1","termid":"PBO:0079251"}


id: PBO:0077998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 2","termid":"PBO:0077998"}


id: PBO:0085624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in establishing bud site selection; localizes to the bud neck and previous sites of cell division (bud scars or cytokinesis remnants (CRMs); localization to both sites is interdependent with Rax2p; required with Rax2p to anchor Nba1p and Nis1p to CRMs where a Cdc42p inhibitory zone is established, preventing repolarization of cells at previous division sites; predicted type IIIa transmembrane protein with similarity to members of the insulin-related peptide superfamily","termid":"PBO:0085624"}


id: SO:0000975
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene found within a minicircle.","direct_ancestors":[{"relation_name":"is_a","term_name":"kinetoplast_gene","termid":"SO:0000089"},{"relation_name":"part_of","term_name":"minicircle","termid":"SO:0000980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minicircle_gene","synonyms":[{"name":"minicircle gene","type":"exact"}],"termid":"SO:0000975"}


id: PBO:0034172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_fasciculating_neuron_projection","termid":"PBO:0034172"}


id: PBO:0091653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase family 3","termid":"PBO:0091653"}


id: GO:0035818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the amount of urine excreted over a unit of time, as a result of pressure natriuresis.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pressure natriuresis","termid":"GO:0003095"},{"relation_name":"is_a","term_name":"positive regulation of urine volume","termid":"GO:0035810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urine volume by pressure natriuresis","synonyms":[{"name":"diuresis resulting from pressure natriuresis","type":"related"}],"termid":"GO:0035818"}


id: GO:0042729
data:
  {"annotated_genes":["SJAG_05220","SJAG_01775","SJAG_01224","SJAG_01211","SJAG_05266","SJAG_01371","SJAG_03437","SJAG_02731","SJAG_00918","SJAG_05319"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85173,85773,87001,94694,96603,103632,105021,106033,110261,113100],"is_not":false,"summary":null,"term":"GO:0042729"}]},"cv_name":"cellular_component","definition":"A large protein complex, containing around 8-10 subunits in yeast, including Duo1p, Dam1p, Dad1p and Ask1p. The complex forms part of the outer kinetochore, associates with microtubules when the kinetochore attaches to the spindle, and plays a role in spindle attachment, chromosome segregation and spindle stability.","definition_xrefs":["PMID:15632076","PMID:15640796","PMID:11782438","GOC:jl","GOC:vw","PMID:11799062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575","GO:0005634","GO:0000776"],"is_obsolete":false,"name":"DASH complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043925","GO:0043926"],"synonyms":[{"name":"DDD complex","type":"exact"},{"name":"Dam1 complex","type":"exact"},{"name":"Duo1p-Dam1p-Dad1p complex","type":"exact"},{"name":"condensed nuclear chromosome kinetochore-associated DASH complex","type":"exact"}],"termid":"GO:0042729","terms_by_termid":{"GO:0042729":null}}


id: MOD:01137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of a lysine residue with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride, to form N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine.","definition_xrefs":["DeltaMass:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","termid":"MOD:01120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine","synonyms":[{"name":"PMC lysyl","type":"exact"},{"name":"PmcLys","type":"exact"}],"termid":"MOD:01137"}


id: GO:0008662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose 1-phosphate = ADP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-phosphofructokinase activity","secondary_identifiers":["RHEA:14213","MetaCyc:1PFRUCTPHOSN-RXN"],"synonyms":[{"name":"1-phosphofructokinase (phosphorylating)","type":"related"},{"name":"ATP:D-fructose-phosphate 6-phosphotransferase activity","type":"related"},{"name":"D-fructose-1-phosphate kinase activity","type":"related"},{"name":"fructose 1-phosphate kinase activity","type":"related"},{"name":"fructose-1-phosphate kinase activity","type":"related"},{"name":"phosphofructokinase 1","type":"related"}],"termid":"GO:0008662"}


id: FYPO:0007801
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115361],"is_not":false,"summary":null,"term":"FYPO:0007801"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a dividing cell at the growith end of a hypha has a septum in an abnormal location. Normally, the septum forms in the cytosol-enriched portion of the cell, displaced slightly off-center toward the portion of the cell occupied by the vacuole.","definition_xrefs":["PomBase:mah","PMID:30726171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":1,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized hyphal septum","references_by_uniquename":{"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta"],"synonyms":[{"name":"abnormal hyphal septum localization","type":"related"},{"name":"abnormal hyphal septum location","type":"exact"},{"name":"abnormal hyphal septum position","type":"exact"},{"name":"abnormal hyphal septum positioning","type":"related"},{"name":"mislocalised hyphal septum","type":"exact"},{"name":"mislocalized septum during hyphal growth","type":"exact"},{"name":"mislocalized septum in hypha","type":"exact"},{"name":"mislocalized septum in hyphal growth","type":"exact"},{"name":"misplaced hyphal septum","type":"exact"}],"termid":"FYPO:0007801","terms_by_termid":{"FYPO:0007801":null}}


id: FYPO:0000581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of spore germination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased spore germination frequency","synonyms":[{"name":"decreased spore germination","type":"exact"},{"name":"decreased spore viability","type":"related"},{"name":"reduced spore germination frequency","type":"exact"},{"name":"reduced spore viability","type":"related"},{"name":"spore germination: decreased","type":"related"}],"termid":"FYPO:0000581"}


id: GO:0010561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"is_a","term_name":"negative regulation of glycoprotein metabolic process","termid":"GO:1903019"},{"relation_name":"negatively_regulates","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"}


id: PBO:0041207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 1","termid":"PBO:0041207"}


id: POMBASE_GENE_EX_REL:not_happens_during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not_happens_during","termid":"POMBASE_GENE_EX_REL:not_happens_during"}


id: PBO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphospho-oligosaccharide-protein glycosyltransferase Ost1 (predicted)","termid":"PBO:0002472"}


id: PBO:0018067
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine DeAminase","termid":"PBO:0018067"}


id: PBO:0071299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 22","termid":"PBO:0071299"}


id: GO:0021774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a ligand to a retinoic acid receptor in a precursor cell in the ventral spinal cord that contributes to the commitment of the precursor cell to an interneuron fate.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:sdb_2009","GOC:tb","GOC:cls","GO_REF:0000021","PMID:11262869","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in ventral spinal cord interneuron specification (obsolete GO:0021774)","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in ventral spinal cord interneuron specification","type":"exact"}],"termid":"GO:0021774"}


id: GO:0099566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the concentration of calcium in the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytosolic calcium ion concentration","termid":"GO:0051480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099566"}


id: FYPO:0009052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing glutamate as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0005447","FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on glutamate nitrogen source","synonyms":[{"name":"increased growth on glutamate nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on glutamate nitrogen source","type":"exact"}],"termid":"FYPO:0009052"}


id: PBO:0091008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan synthase","termid":"PBO:0091008"}


id: FYPO:0007029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to polysomes is decreased.","definition_xrefs":["PomBase:mah","PMID:31285271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to polysome","synonyms":[{"name":"decreased protein localisation to polysome","type":"exact"},{"name":"decreased protein localization to polyribosome","type":"exact"},{"name":"decreased protein localization to polysome during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to polysome during vegetative growth","type":"exact"},{"name":"reduced protein localization to polysome","type":"exact"}],"termid":"FYPO:0007029"}


id: PBO:0074458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 3","termid":"PBO:0074458"}


id: PBO:0077239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 1","termid":"PBO:0077239"}


id: GO:0034361
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm. It is found in blood and transports endogenous products (newly synthesized cholesterol and triglycerides) from the liver.","definition_xrefs":["GOC:mah","GOC:rl","GOC:BHF","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich plasma lipoprotein particle","termid":"GO:0034385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"very-low-density lipoprotein particle","synonyms":[{"name":"VLDL complex","type":"exact"},{"name":"VLDL particle","type":"exact"},{"name":"very-low-density lipoprotein complex","type":"exact"}],"termid":"GO:0034361"}


id: GO:0045773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axon extension.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axonogenesis","termid":"GO:0050772"},{"relation_name":"positively_regulates","term_name":"axon extension","termid":"GO:0048675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon extension","synonyms":[{"name":"activation of axon extension","type":"narrow"},{"name":"stimulation of axon extension","type":"narrow"},{"name":"up regulation of axon extension","type":"exact"},{"name":"up-regulation of axon extension","type":"exact"},{"name":"upregulation of axon extension","type":"exact"}],"termid":"GO:0045773"}


id: GO:0050976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of touch in which a mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of touch","termid":"GO:0050975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:0050976"}


id: GO:0062079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex essential for autophagy during nutrient deprivation, a catabolic process that sequesters undesired cellular material into autophagosomes for delivery to lysosomes for degradation. Contributes to nutrition homeostasis and damage control in eukaryotic cells. Functions at a late step of autophagosome formation for efficient completion of sequestration, probably through facilitating recruitment of ATG8-phosphatidylethanolamine (PE) to the preautophagosomal structure (PAS) and/or its protection from deconjugation by ATG4. Composed of ATG2 and ATG18 in Saccharomyces cerevisiae.","definition_xrefs":["GOC:bhm","PMID:23230146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"phagophore assembly site membrane","termid":"GO:0034045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0000407"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0000407"],"is_obsolete":false,"name":"ATG2-ATG18 complex","termid":"GO:0062079"}


id: GO:0090496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of mesenchymal tissue that contributes to the formation of a limb bud.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme migration","termid":"GO:0090131"},{"relation_name":"part_of","term_name":"limb bud formation","termid":"GO:0060174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme migration involved in limb bud formation","termid":"GO:0090496"}


id: PBO:0078954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 5-1","termid":"PBO:0078954"}


id: GO:0006699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bile acids, any of a group of steroid carboxylic acids occurring in bile.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"bile acid metabolic process","termid":"GO:0008206"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"bile acid biosynthetic process","synonyms":[{"name":"bile acid anabolism","type":"exact"},{"name":"bile acid biosynthesis","type":"exact"},{"name":"bile acid formation","type":"exact"},{"name":"bile acid synthesis","type":"exact"}],"termid":"GO:0006699"}


id: PBO:0042897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 1","termid":"PBO:0042897"}


id: PBO:0062856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 1","termid":"PBO:0062856"}


id: GO:0060341
data:
  {"annotated_genes":["SJAG_00906","SJAG_03970","SJAG_01311","SJAG_02392","SJAG_04597","SJAG_05978","SJAG_00823","SJAG_04312","SJAG_04464","SJAG_01245","SJAG_03602","SJAG_01373","SJAG_01084","SJAG_00030","SJAG_04509","SJAG_02645","SJAG_02074","SJAG_03048","SJAG_01716","SJAG_04343","SJAG_02592","SJAG_01825","SJAG_03453","SJAG_01166","SJAG_00883","SJAG_03591","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[111510,87763,102381,102478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"},{"annotations":[101935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[86988,91910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[90454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[103366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"},{"annotations":[110635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[91911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[103543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905406"},{"annotations":[90459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[70418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[97944,96530,107161,89849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[86878,90417,98487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[94514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[100772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903078"},{"annotations":[83932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[107804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[88041,83936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"},{"annotations":[104091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905391"},{"annotations":[99436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905634"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process in which a cell, a substance, or a cellular entity is transported to, or maintained in a specific location within or in the membrane of a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular localization","termid":"GO:0051641"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00823":null,"SJAG_00883":null,"SJAG_00906":null,"SJAG_01084":null,"SJAG_01166":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_01716":null,"SJAG_01805":null,"SJAG_01825":null,"SJAG_02074":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02645":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03591":null,"SJAG_03602":null,"SJAG_03970":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cellular localisation","type":"exact"}],"termid":"GO:0060341","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0046827":null,"GO:0060628":null,"GO:0070863":null,"GO:0120047":null,"GO:0140325":null,"GO:1900181":null,"GO:1902543":null,"GO:1902854":null,"GO:1903067":null,"GO:1903077":null,"GO:1903078":null,"GO:1905391":null,"GO:1905406":null,"GO:1905412":null,"GO:1905634":null,"GO:2001135":null}}


id: GO:0016990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H2O = L-citrulline + NH3.","definition_xrefs":["EC:3.5.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"arginine deiminase activity","secondary_identifiers":["MetaCyc:ARGININE-DEIMINASE-RXN","RHEA:19597"],"synonyms":[{"name":"L-arginine deiminase activity","type":"related"},{"name":"L-arginine iminohydrolase activity","type":"related"},{"name":"arginine dihydrolase activity","type":"related"},{"name":"citrulline iminase activity","type":"related"}],"termid":"GO:0016990"}


id: GO:0008224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, Gram-positive bacterial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Gram-positive antibacterial peptide activity (obsolete GO:0008224)","synonyms":[{"name":"Gram-positive antibacterial peptide activity","type":"exact"}],"termid":"GO:0008224"}


id: GO:0030020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A constituent of the extracellular matrix that enables the matrix to resist longitudinal stress.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"extracellular matrix structural constituent conferring tensile strength","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"}],"termid":"GO:0030020"}


id: PBO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family phosphatidylinositol transporter (predicted)","termid":"PBO:0000476"}


id: GO:0102333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + 3 H+ + a stearoyl-[acp] = nonadec-1-ene + 2 carbon dioxide + coenzyme A + a holo-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"stearoyl-[acp] elongase/decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-13261"],"termid":"GO:0102333"}


id: PBO:0052265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 3B","termid":"PBO:0052265"}


id: PBO:0069204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 458, pseudogene","termid":"PBO:0069204"}


id: GO:0010315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of auxins from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:16990790","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of auxin mediated signaling pathway","termid":"GO:0010928"},{"relation_name":"is_a","term_name":"auxin transport","termid":"GO:0060918"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"auxin export across the plasma membrane","synonyms":[{"name":"auxin efflux","type":"broad"},{"name":"auxin export","type":"broad"}],"termid":"GO:0010315"}


id: GO:0033673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphorylation","termid":"GO:0042326"},{"relation_name":"is_a","term_name":"regulation of kinase activity","termid":"GO:0043549"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of kinase activity","synonyms":[{"name":"down regulation of kinase activity","type":"exact"},{"name":"down-regulation of kinase activity","type":"exact"},{"name":"downregulation of kinase activity","type":"exact"},{"name":"inhibition of kinase activity","type":"narrow"},{"name":"kinase inhibitor","type":"narrow"}],"termid":"GO:0033673"}


id: GO:0035755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of cardiolipin (1,3-bis(3-phosphatidyl)glycerol), releasing phosphatidic acid (PA).","definition_xrefs":["GOC:sp","PMID:21397848","PMID:17028579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"cardiolipin hydrolase activity","secondary_identifiers":["Reactome:R-HSA-8954398"],"termid":"GO:0035755"}


id: PBO:0013830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-T, Gpi16 (predicted)","termid":"PBO:0013830"}


id: PR:Q9C0U9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCPB1C11.03 gene.","definition_xrefs":["UniProtKB:Q9C0U9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter PB1C11.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB1C11.03","synonyms":[{"name":"Spom972h-SPCPB1C11.03","type":"exact"}],"termid":"PR:Q9C0U9"}


id: PBO:0074853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 42A","termid":"PBO:0074853"}


id: PBO:0083196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene HIR3; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083196"}


id: PBO:0074529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C5","termid":"PBO:0074529"}


id: GO:0043382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of memory T cell differentiation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of memory T cell differentiation","termid":"GO:0043380"},{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"memory T cell differentiation","termid":"GO:0043379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of memory T cell differentiation","synonyms":[{"name":"activation of memory T cell differentiation","type":"narrow"},{"name":"positive regulation of memory T cell development","type":"related"},{"name":"positive regulation of memory T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of memory T-cell differentiation","type":"exact"},{"name":"positive regulation of memory T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of memory T cell differentiation","type":"narrow"},{"name":"up regulation of memory T cell differentiation","type":"exact"},{"name":"up-regulation of memory T cell differentiation","type":"exact"},{"name":"upregulation of memory T cell differentiation","type":"exact"}],"termid":"GO:0043382"}


id: PBO:0055347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2775","termid":"PBO:0055347"}


id: PBO:0038394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_in_presence_of","termid":"PBO:0038394"}


id: PBO:0053995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1317","termid":"PBO:0053995"}


id: GO:0051359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP611 chromophore cross-link from the alpha-carboxyl carbon of residue n, a methionine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons. This modification is found in the GFP-like fluorescent chromoprotein from the sea anemone Entacmaea quadricolor.","definition_xrefs":["RESID:AA0379","PDB:1XQM","PDB:1UIS","PMID:10852900","PMID:12185250","PMID:15542608","PMID:12909624"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-imino-methionine 5-imidazolinone glycine (obsolete GO:0051359)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-imino-methionine 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-imino-methionine 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051359"}


id: FYPO:0005337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 9 and 14 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H3-K9K14 acetylation during vegetative growth (obsolete FYPO:0005337)","synonyms":[{"name":"increased histone H3 K9K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9K14 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone lysine H3 K9K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005337"}


id: PBO:0042254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil serine rich protein 2","termid":"PBO:0042254"}


id: GO:0004921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-11 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-11 receptor activity","synonyms":[{"name":"IL-11 receptor activity","type":"exact"},{"name":"IL-11R","type":"exact"},{"name":"gp130","type":"related"}],"termid":"GO:0004921"}


id: PBO:0002579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn10","termid":"PBO:0002579"}


id: PBO:0079165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type laminin G domain and EAR repeats","termid":"PBO:0079165"}


id: PR:O94379
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl32 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L32, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.13c","synonyms":[{"name":"Spom972h-mrpl32","type":"exact"}],"termid":"PR:O94379"}


id: FYPO:0002073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during a cellular response to copper ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to nucleus during cellular response to copper ion","synonyms":[{"name":"ectopic protein localization to nucleus during cellular response to copper","type":"exact"},{"name":"nuclear protein accumulation in response to copper","type":"related"},{"name":"protein mislocalised to nucleus during cellular response to copper ion","type":"exact"},{"name":"protein mislocalised to nucleus during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during cellular response to copper","type":"exact"},{"name":"protein mislocalized to nucleus during cellular response to copper during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to nucleus during cellular response to copper ion during vegetative growth","type":"exact"}],"termid":"FYPO:0002073"}


id: PBO:0042247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 9","termid":"PBO:0042247"}


id: GO:0010075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of a meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"part_of","term_name":"meristem maintenance","termid":"GO:0010073"},{"relation_name":"regulates","term_name":"meristem growth","termid":"GO:0035266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem growth","synonyms":[{"name":"regulation of meristem size","type":"exact"}],"termid":"GO:0010075"}


id: GO:0050511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate + UDP-N-acetyl-alpha-D-glucosamine = beta-D-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamm-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate + H+ + UDP.","definition_xrefs":["RHEA:23192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8976","EC:2.4.1.227"],"synonyms":[{"name":"MurG transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:N-acetyl-alpha-D-muramyl(oyl-L-Ala- gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol beta-1,4-N-acetylglucosaminlytransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase activity","type":"related"},{"name":"undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase activity","type":"related"},{"name":"undecaprenyldiphospho-muramoylpentapeptide b-N-acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0050511"}


id: PBO:0026833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(U)_RNA_binding","termid":"PBO:0026833"}


id: PBO:0046565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 7","termid":"PBO:0046565"}


id: FYPO:0002247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of glucose binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal monosaccharide binding","termid":"FYPO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased glucose binding","synonyms":[{"name":"reduced glucose binding","type":"exact"}],"termid":"FYPO:0002247"}


id: GO:0031535
data:
  {"annotated_genes":["SJAG_03073","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95321],"is_not":false,"summary":null,"term":"GO:0031535"},{"annotations":[97531],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0062168"}]},"cv_name":"biological_process","definition":"The movement of one microtubule along another microtubule, where the motion is directed towards the plus ends of the microtubules.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule sliding","termid":"GO:0051012"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plus-end directed microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031535","terms_by_termid":{"GO:0031535":null,"GO:0062168":null}}


id: PBO:0084013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen synthase; expression induced by glucose limitation, nitrogen starvation, heat shock, and stationary phase; activity regulated by cAMP-dependent, Snf1p and Pho85p kinases as well as by the Gac1p-Glc7p phosphatase; GSY2 has a paralog, GSY1, that arose from the whole genome duplication; relocalizes from cytoplasm to plasma membrane upon DNA replication stress","termid":"PBO:0084013"}


id: PBO:0073194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein W pseudogene 1","termid":"PBO:0073194"}


id: PBO:0059982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 2","termid":"PBO:0059982"}


id: GO:0110108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of imaginal disc-derived wing vein specification.","definition_xrefs":["GOC:ha","PMID:11861482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of imaginal disc-derived wing vein specification","termid":"GO:0110107"},{"relation_name":"positively_regulates","term_name":"imaginal disc-derived wing vein specification","termid":"GO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of imaginal disc-derived wing vein specification","termid":"GO:0110108"}


id: GO:0003980
data:
  {"annotated_genes":["SJAG_04571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109934],"is_not":false,"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins.","definition_xrefs":["PMID:10764828","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"UDP-glucose:glycoprotein glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-548884","RHEA:61304"],"synonyms":[{"name":"UGGT activity","type":"exact"}],"termid":"GO:0003980","terms_by_termid":{"GO:0003980":null}}


id: FYPO:0000069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of thiabendazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to thiabendazole","synonyms":[{"name":"resistance to TBZ","type":"exact"},{"name":"resistance to thiabendazole during mitotic cell cycle","type":"related"},{"name":"resistance to thiabendazole during vegetative growth","type":"exact"},{"name":"resistant to TBZ","type":"exact"},{"name":"resistant to thiabendazole","type":"exact"}],"termid":"FYPO:0000069"}


id: PBO:0084581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL012W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCL014W","termid":"PBO:0084581"}


id: PBO:0084447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannitol dehydrogenase; MAN2 has a paralog, DSF1, that arose from a segmental duplication","termid":"PBO:0084447"}


id: PBO:0058609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6741","termid":"PBO:0058609"}


id: GO:0102462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside + UDP-L-rhamnose = quercetin 3-O-rhamnosyl(1->2)glucoside-7-O-rhamnoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin 3-sophoroside 7-O-rhamnosyltransferase activity (obsolete GO:0102462)","termid":"GO:0102462"}


id: PR:O74774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An HBS1-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1 alpha-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.01","secondary_identifiers":["UniProtKB:O74774"],"synonyms":[{"name":"SPBC25B2.01","type":"related"},{"name":"Spom972h-HBS1L","type":"exact"}],"termid":"PR:O74774"}


id: PBO:0056260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MALT1 paracaspase","termid":"PBO:0056260"}


id: PATO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000476 bad value (obsolete PATO:0000476)","termid":"PATO:0000476"}


id: PBO:0083405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YHR032C-A","termid":"PBO:0083405"}


id: PBO:0085919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expression is induced after ethanol shock; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0085919"}


id: PBO:0050568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H4","termid":"PBO:0050568"}


id: SO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequencer read of a genomic DNA substrate.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_DNA_read","synonyms":[{"name":"gDNA read","type":"exact"},{"name":"gDNA_read","type":"exact"},{"name":"genomic DNA read","type":"exact"}],"termid":"SO:0001828"}


id: PBO:0035965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_during_cellular_response_to_acetaldehyde","termid":"PBO:0035965"}


id: GO:1902544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA N-glycosylase activity.","definition_xrefs":["GOC:rph","PMID:15518571","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA N-glycosylase activity (obsolete GO:1902544)","synonyms":[{"name":"regulation of DNA glycosylase activity","type":"exact"},{"name":"regulation of endonuclease VIII activity","type":"related"}],"termid":"GO:1902544"}


id: PBO:0074965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-7","termid":"PBO:0074965"}


id: PBO:0063076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase beta","termid":"PBO:0063076"}


id: PBO:0065613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 7","termid":"PBO:0065613"}


id: MOD:00620
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:301","PubMed:7856876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine monobromobimane derivative","synonyms":[{"name":"Bromobimane","type":"related"},{"name":"Monobromobimane derivative","type":"related"}],"termid":"MOD:00620"}


id: PBO:0108982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 6","termid":"PBO:0108982"}


id: PR:O60072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An activating signal cointegrator 1 complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11752:SF8","OMA:SCHPO03837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase mug81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.10c","secondary_identifiers":["UniProtKB:O60072"],"synonyms":[{"name":"Spom972h-ASCC3","type":"exact"},{"name":"meiotically up-regulated gene 81 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60072"}


id: PBO:0074469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine synthase","termid":"PBO:0074469"}


id: GO:0170001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ergothioneine from one side of a membrane to the other.","definition_xrefs":["PMID:15795384","PMID:29530864","PMID:20601551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ergothioneine transmembrane transporter activity","termid":"GO:0170001"}


id: GO:1903807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-threonine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:23895341","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"threonine transport","termid":"GO:0015826"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-threonine import across plasma membrane","secondary_identifiers":["GO:0036231"],"synonyms":[{"name":"L-threonine import","type":"broad"},{"name":"L-threonine import into cell","type":"exact"},{"name":"L-threonine uptake","type":"exact"}],"termid":"GO:1903807"}


id: GO:2000986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of behavioral fear response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"negative regulation of fear response","termid":"GO:1903366"},{"relation_name":"is_a","term_name":"regulation of behavioral fear response","termid":"GO:2000822"},{"relation_name":"negatively_regulates","term_name":"behavioral fear response","termid":"GO:0001662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of behavioral fear response","synonyms":[{"name":"negative regulation of behavioural fear response","type":"exact"}],"termid":"GO:2000986"}


id: MOD:01296
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to monosodium L-glutamate.","definition_xrefs":["Unimod:30#E","PubMed:12216740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosodium salt","termid":"MOD:00423"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium L-glutamate","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"MSG","type":"exact"},{"name":"Na1Glu","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:01296"}


id: GO:0120116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of mature glucagon by proteolysis of the precursor proglucagon.","definition_xrefs":["PMID:28719828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"glucagon processing","termid":"GO:0120116"}


id: PBO:0088184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-finger DNA-binding transcription factor; involved in transcriptional regulation of the methionine biosynthetic genes; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; lack of such a loop for MET31 may account for the differential actions of Met32p and Met31p; MET32 has a paralog, MET31, that arose from the whole genome duplication","termid":"PBO:0088184"}


id: MOD:00097
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to glycine amide.","definition_xrefs":["RESID:AA0088","PubMed:13591312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine amide","synonyms":[{"name":"2-aminoacetamide","type":"exact"},{"name":"2-aminoethanamide","type":"exact"},{"name":"2-azanylethanamide","type":"exact"},{"name":"GlyN","type":"exact"},{"name":"MOD_RES Glycine amide","type":"exact"},{"name":"amidated glycine","type":"exact"},{"name":"glycinamide","type":"exact"},{"name":"glycine amide","type":"exact"}],"termid":"MOD:00097"}


id: PATO:0002148
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A virulence that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"virulence","termid":"PATO:0002146"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased virulence","termid":"PATO:0002148"}


id: GO:0090096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of metanephric cap mesenchymal cell proliferation. Metanephric cap mesenchymal cell proliferation is the multiplication or reproduction of metanephric cap mesenchymal cells, resulting in the expansion of the cell population. A metanephric cap mesenchymal cell is a mesenchymal cell that has condensed with other mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:dph","GOC:yaf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell proliferation","termid":"GO:0002053"},{"relation_name":"is_a","term_name":"regulation of metanephric cap mesenchymal cell proliferation","termid":"GO:0090095"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in kidney development","termid":"GO:1901724"},{"relation_name":"positively_regulates","term_name":"metanephric cap mesenchymal cell proliferation involved in metanephros development","termid":"GO:0090094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric cap mesenchymal cell proliferation","termid":"GO:0090096"}


id: GO:0061141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lung ciliated cell. A lung ciliated cell is a specialized lung epithelial cell that contains cilia for moving substances released from lung secretory cells.","definition_xrefs":["GOC:krc","GOC:dph","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelial cell differentiation","termid":"GO:0060487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung ciliated cell differentiation","termid":"GO:0061141"}


id: PBO:0070027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1324, pseudogene","termid":"PBO:0070027"}


id: PBO:0088631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44","termid":"PBO:0088631"}


id: PBO:0058050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4271","termid":"PBO:0058050"}


id: PBO:0040206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astrotactin 2","termid":"PBO:0040206"}


id: PBO:0013792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRC1-L/borderline left","termid":"PBO:0013792"}


id: PBO:0004806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose methyltransferase (predicted)","termid":"PBO:0004806"}


id: PBO:0061700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 dehydrodolichyl diphosphate synthase subunit","termid":"PBO:0061700"}


id: PBO:0047198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 216 member A","termid":"PBO:0047198"}


id: PBO:0089305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA/tRNA cytidine N-acetyltransferase","termid":"PBO:0089305"}


id: GO:0072187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a metanephric cap from unspecified parts. The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"metanephric cap morphogenesis","termid":"GO:0072186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap formation","termid":"GO:0072187"}


id: PBO:0114320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, ubiquitin conjugatiing enzyme-like","termid":"PBO:0114320"}


id: PBO:0004312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase complex catalytic subunit Naa30 (predicted)","termid":"PBO:0004312"}


id: GO:0010379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phaseic acid (PA), a catabolite of the plant hormone abscisic acid (ABA).","definition_xrefs":["BioCyc:PWY-5271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"apocarotenoid biosynthetic process","termid":"GO:0043289"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"phaseic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5271"],"termid":"GO:0010379"}


id: PBO:0088323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex WD repeat subunit Vps8","termid":"PBO:0088323"}


id: PBO:0005003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-associated factor Raf1","termid":"PBO:0005003"}


id: PBO:0005594
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT Organizer","termid":"PBO:0005594"}


id: FYPO:0000850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to a stress. Typically, a cell population is deemed resistant to a stress if cells in the population grow and divide when exposed to the stress at an intensity at which wild-type cells stop growing (and may die).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell population growth phenotype","termid":"FYPO:0001358"},{"relation_name":"is_a","term_name":"resistance to stress","termid":"FYPO:0002046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to stress during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to stress","type":"exact"},{"name":"resistance to stress during mitotic cell cycle","type":"related"},{"name":"resistant to stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000850"}


id: PBO:0073922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 11","termid":"PBO:0073922"}


id: FYPO:0006145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ions is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:24569997","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion during meiotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper during meiotic cell cycle","type":"exact"},{"name":"decreased RNA level during meiotic cell cycle during copper excess","type":"related"},{"name":"decreased transcript level during cellular response to copper ion during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006145"}


id: PBO:0055420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2850","termid":"PBO:0055420"}


id: PBO:0036264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex scaffold subunit Not1","termid":"PBO:0036264"}


id: PBO:0089902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily","termid":"PBO:0089902"}


id: PBO:0039357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenin X-linked","termid":"PBO:0039357"}


id: PBO:0087300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin, histone H3 deacetylase; involved along with Hst4p in telomeric silencing, cell cycle progression, radiation resistance, genomic stability and short-chain fatty acid metabolism; member of the Sir2 family of NAD(+)-dependent protein deacetylases","termid":"PBO:0087300"}


id: PBO:0005620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cek1","termid":"PBO:0005620"}


id: GO:0001854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3d product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"complement component C3d binding","termid":"GO:0001854"}


id: GO:0033142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear progesterone receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nuclear progesterone receptor binding","synonyms":[{"name":"progesterone receptor binding","type":"broad"}],"termid":"GO:0033142"}


id: PATO:0000663
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000663 occurrent (obsolete PATO:0000663)","termid":"PATO:0000663"}


id: PBO:0028929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endoplasmic_reticulum_localization","termid":"PBO:0028929"}


id: PBO:0068984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 228, pseudogene","termid":"PBO:0068984"}


id: PBO:0051783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F1","termid":"PBO:0051783"}


id: PBO:0034487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proteolysis_during_vegetative_growth","termid":"PBO:0034487"}


id: SO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polyploid where the multiple chromosome set was derived from the same organism.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"SO:0001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autopolyploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Autopolyploid"],"termid":"SO:0001255"}


id: PBO:0054311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1703","termid":"PBO:0054311"}


id: GO:0010374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stomatal complex over time from its formation to the mature structure. The stomatal complex is the stomatal guard cells and their associated epidermal cells.","definition_xrefs":["PMID:17259259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"plant epidermis development","termid":"GO:0090558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal complex development","termid":"GO:0010374"}


id: PBO:0053165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDOC1 regulator of NFKB signaling","termid":"PBO:0053165"}


id: PBO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A8","termid":"PBO:0039625"}


id: PBO:0066566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHBDF1 pseudogene 1","termid":"PBO:0066566"}


id: FYPO:0006862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which an RNA that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PMID:29424342","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"mislocalized RNA during vegetative growth","termid":"FYPO:0006861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"RNA mislocalized to cytoplasm during vegetative growth","synonyms":[{"name":"RNA mislocalised to cytoplasm during vegetative growth","type":"exact"},{"name":"RNA mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"ectopic RNA localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006862"}


id: GO:0034813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-7,8-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:1137"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene 7,8-dioxygenase activity (obsolete GO:0034813)","termid":"GO:0034813"}


id: GO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by vasomotor excitation and results in a decrease in the diameter of an artery during the baroreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in baroreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0001987"}


id: GO:0060299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of sarcomere organization","termid":"GO:0060297"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"sarcomere organization","termid":"GO:0045214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"negative regulation of sarcomere organization","synonyms":[{"name":"negative regulation of sarcomere organisation","type":"exact"}],"termid":"GO:0060299"}


id: PBO:0077153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 3B","termid":"PBO:0077153"}


id: GO:1903305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["PMID:12526776","GOC:pad","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of regulated secretory pathway","termid":"GO:1903305"}


id: GO:0060252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of glial cell proliferation.","definition_xrefs":["GOC:sl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"positive regulation of gliogenesis","termid":"GO:0014015"},{"relation_name":"is_a","term_name":"regulation of glial cell proliferation","termid":"GO:0060251"},{"relation_name":"positively_regulates","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell proliferation","termid":"GO:0060252"}


id: GO:0071993
data:
  {"annotated_genes":["SJAG_05213","SJAG_03497","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92129,114386,93125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[114387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071995"}]},"cv_name":"biological_process","definition":"The directed movement of a phytochelatin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phytochelatins are a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phytochelatin transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin transport","type":"related"}],"termid":"GO:0071993","terms_by_termid":{"GO:0036246":null,"GO:0071995":null}}


id: PATO:0002239
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape that inheres in the bearer by virtue of the bearer's nearly) symmetric shape wide at its ends and narrow in the middle, resembling the figure of number 8.","direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hourglass-shaped","synonyms":[{"name":"figure 8 shaped","type":"exact"}],"termid":"PATO:0002239"}


id: PBO:0081281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 56, pseudogene","termid":"PBO:0081281"}


id: PBO:0088411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafunctional aromatic polypeptide Aro1","termid":"PBO:0088411"}


id: GO:0031822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1B serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1B serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 1B receptor binding","type":"exact"},{"name":"type 1B serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031822"}


id: PBO:0065428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 1","termid":"PBO:0065428"}


id: SO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contig of BAC reads.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"BAC","termid":"SO:0000153"},{"relation_name":"is_a","term_name":"contig","termid":"SO:0000149"},{"relation_name":"part_of","term_name":"BAC","termid":"SO:0000153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC_read_contig","synonyms":[{"name":"BAC read contig","type":"exact"}],"termid":"SO:0001866"}


id: PBO:0057034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 128-2","termid":"PBO:0057034"}


id: PBO:0030839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_adenine_import","termid":"PBO:0030839"}


id: PBO:0051377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 4-1","termid":"PBO:0051377"}


id: GO:0044220
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The host cell cytoplasm situated near, or occurring around, the host nucleus.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell perinuclear region of cytoplasm","termid":"GO:0044220"}


id: PBO:0081056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 13","termid":"PBO:0081056"}


id: GO:1904004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sebum secreting cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:hjd","PMID:16901790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of sebum secreting cell proliferation","termid":"GO:1904002"},{"relation_name":"positively_regulates","term_name":"sebum secreting cell proliferation","termid":"GO:1990654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sebum secreting cell proliferation","synonyms":[{"name":"activation of sebocyte proliferation","type":"related"},{"name":"activation of sebum secreting cell proliferation","type":"narrow"},{"name":"positive regulation of sebocyte proliferation","type":"related"},{"name":"up regulation of sebocyte proliferation","type":"related"},{"name":"up regulation of sebum secreting cell proliferation","type":"exact"},{"name":"up-regulation of sebocyte proliferation","type":"related"},{"name":"up-regulation of sebum secreting cell proliferation","type":"exact"},{"name":"upregulation of sebocyte proliferation","type":"related"},{"name":"upregulation of sebum secreting cell proliferation","type":"exact"}],"termid":"GO:1904004"}


id: PBO:0078938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 6-1","termid":"PBO:0078938"}


id: PBO:0082492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic core subunit, Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; contains a RING-H2 domain that is required for activity","termid":"PBO:0082492"}


id: GO:0072330
data:
  {"annotated_genes":["SJAG_02885","SJAG_01238","SJAG_00630","SJAG_00673","SJAG_04674","SJAG_02796","SJAG_01458","SJAG_03180","SJAG_03526","SJAG_04404","SJAG_02988","SJAG_00043","SJAG_01935","SJAG_03632","SJAG_02717","SJAG_02106","SJAG_00305","SJAG_03313","SJAG_03130","SJAG_03198","SJAG_00099","SJAG_03786","SJAG_01946","SJAG_04107","SJAG_02769","SJAG_03679","SJAG_03972","SJAG_04988","SJAG_04481","SJAG_04972","SJAG_02007","SJAG_03553","SJAG_01300","SJAG_01356","SJAG_05200","SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019413"},{"annotations":[110267,75013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[91057,98145,93389,84153,108661,96830,93756,94347,94439,87464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[102005,94282,107474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[87966,85536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[87967,85537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[95471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034276"},{"annotations":[60504,58889,62003,108970,59959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019249"},{"annotations":[93239,108847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[93757,96831,100444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[107413],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[93759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[98861,109536,94819,84925,94815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[94352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042866"},{"annotations":[69198,110570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[99588,85539,102007,87970,107475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00099":null,"SJAG_00305":null,"SJAG_00630":null,"SJAG_00673":null,"SJAG_01238":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_01935":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02106":null,"SJAG_02717":null,"SJAG_02769":null,"SJAG_02796":null,"SJAG_02885":null,"SJAG_02988":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_03786":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04107":null,"SJAG_04404":null,"SJAG_04481":null,"SJAG_04674":null,"SJAG_04972":null,"SJAG_04988":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monocarboxylic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"monocarboxylic acid anabolism","type":"exact"},{"name":"monocarboxylic acid biosynthesis","type":"exact"},{"name":"monocarboxylic acid formation","type":"exact"},{"name":"monocarboxylic acid synthesis","type":"exact"}],"termid":"GO:0072330","terms_by_termid":{"GO:0006633":null,"GO:0006636":null,"GO:0009102":null,"GO:0009107":null,"GO:0015940":null,"GO:0019249":null,"GO:0019367":null,"GO:0019413":null,"GO:0030497":null,"GO:0034276":null,"GO:0034625":null,"GO:0042759":null,"GO:0042761":null,"GO:0042866":null,"GO:0045717":null,"GO:1900535":null}}


id: PBO:0085776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein necessary for stability of L-A dsRNA-containing particles","termid":"PBO:0085776"}


id: FYPO:0001651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal lysine import","synonyms":[{"name":"abnormal L-lysine import","type":"exact"},{"name":"abnormal L-lysine import across plasma membrane","type":"exact"},{"name":"abnormal lysine import into cell","type":"exact"},{"name":"abnormal lysine uptake","type":"exact"}],"termid":"FYPO:0001651"}


id: PBO:0062169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 12 pseudogene","termid":"PBO:0062169"}


id: FYPO:0007281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during meiosis measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:32012158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal level of meiotic gene mRNA during vegetative growth","synonyms":[{"name":"normal level of meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"normal level of meiotic gene RNA during vegetative growth","type":"exact"},{"name":"normal level of meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"normal level of meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"normal level of meiotic nuclear division gene mRNA during vegetative growth","type":"exact"},{"name":"normal meiotic gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0007281"}


id: GO:1904516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a myofibroblast cell.","definition_xrefs":["GOC:TermGenie","PMID:23026405","GO_REF:0000085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast cell apoptotic process","synonyms":[{"name":"MFB apoptosis","type":"narrow"},{"name":"MFB apoptotic process","type":"exact"},{"name":"myofibroblast cell apoptosis","type":"narrow"}],"termid":"GO:1904516"}


id: PBO:0081553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 473","termid":"PBO:0081553"}


id: PBO:0111056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 22 (non-protein coding)","termid":"PBO:0111056"}


id: GO:0004864
data:
  {"annotated_genes":["SJAG_04627","SJAG_03309","SJAG_04999","SJAG_03272","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85413,86311],"is_not":false,"summary":null,"term":"GO:0004864"},{"annotations":[95523,107530,83890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a protein phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase inhibitor activity","termid":"GO:0019212"},{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_04627":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0003674","GO:0004857","GO:0098772","GO:0030234","GO:0140678"],"is_obsolete":false,"name":"protein phosphatase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990681"],"synonyms":[{"name":"phosphoprotein phosphatase inhibitor activity","type":"exact"},{"name":"protein phosphatase 2 inhibitor activity","type":"narrow"},{"name":"protein phosphatase type 2A inhibitor activity","type":"narrow"}],"termid":"GO:0004864","terms_by_termid":{"GO:0004864":null,"GO:0004865":null}}


id: GO:0015043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + 2 ferrileghemoglobin = NADP+ + 2 ferroleghemoglobin.","definition_xrefs":["EC:1.6.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"leghemoglobin reductase activity","secondary_identifiers":["MetaCyc:LEGHEMOGLOBIN-REDUCTASE-RXN"],"synonyms":[{"name":"NAD(P)H:ferrileghemoglobin oxidoreductase activity","type":"related"},{"name":"ferric leghemoglobin reductase activity","type":"related"}],"termid":"GO:0015043"}


id: GO:0072550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triferuloyl spermidine + NADPH + O2 = diferuloyl mono-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"triferuloylspermidine meta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11262"],"synonyms":[{"name":"triferuloyl spermidine meta-hydroxylase activity","type":"exact"}],"termid":"GO:0072550"}


id: GO:0045035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of four asymmetric divisions undergone by the sensory organ precursor cells to generate cells that have distinct cell fates. For example, in the external sensory organ, the precursor cells give rise to one multidendritic neuron and four additional cells (the socket, shaft, sheath cells and the external sense neuron).","definition_xrefs":["PMID:18295597","GOC:mah","PMID:11171389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"part_of","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ precursor cell division","synonyms":[{"name":"sense organ precursor cell division","type":"exact"}],"termid":"GO:0045035"}


id: PBO:0054828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2241","termid":"PBO:0054828"}


id: PBO:0086867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; regulates spermine uptake; involved in polyamine transport; possible mitochondrial protein; PTK1 has a paralog, PTK2, that arose from the whole genome duplication","termid":"PBO:0086867"}


id: GO:0033112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the cyanelle and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle envelope","termid":"GO:0033112"}


id: PATO:0001768
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a bearer or a population by virtue of some of it's members' inability to survive to reproduce.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-lethal (sensu genetics)","termid":"PATO:0001768"}


id: GO:0097519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of a higher-order oligomer of strand exchange proteins (recombinases) on single-stranded DNA.","definition_xrefs":["PMID:10357855","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA recombinase complex","termid":"GO:0097519"}


id: PBO:0049241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM8 antisense RNA 1","termid":"PBO:0049241"}


id: GO:0018537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydromethanopterin + coenzyme F420 + H+ = 5,10-methylenetetrahydromethanopterin + reduced coenzyme F420.","definition_xrefs":["EC:1.5.98.2","RHEA:21144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase activity","secondary_identifiers":["MetaCyc:METHELENE-THMPT-OXI-RXN","UM-BBD_reactionID:r0354","KEGG_REACTION:R04464"],"synonyms":[{"name":"5,10-methylenetetrahydromethanopterin cyclohydrolase activity","type":"related"},{"name":"5,10-methylenetetrahydromethanopterin reductase activity","type":"related"},{"name":"5-methyltetrahydromethanopterin:coenzyme-F420 oxidoreductase activity","type":"related"},{"name":"N(5),N(10)-methylenetetrahydromethanopterin reductase activity","type":"related"},{"name":"N(5),N(10)-methylenetetrahydromethanopterin:coenzyme-F420 oxidoreductase activity","type":"related"},{"name":"N5,N10-methylenetetrahydromethanopterin reductase activity","type":"related"},{"name":"N5,N10-methylenetetrahydromethanopterin:coenzyme-F420 oxidoreductase activity","type":"related"},{"name":"coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase activity","type":"related"},{"name":"methylene-H(4)MPT reductase activity","type":"related"},{"name":"methylene-H4MPT reductase activity","type":"related"},{"name":"methylenetetrahydromethanopterin reductase activity","type":"exact"}],"termid":"GO:0018537"}


id: GO:0045977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of progression through the embryonic mitotic cell cycle.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"positively_regulates","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle, embryonic","synonyms":[{"name":"activation of mitotic cell cycle, embryonic","type":"narrow"},{"name":"positive regulation of embryonic mitotic cell cycle","type":"exact"},{"name":"positive regulation of embryonic mitotic cell cycle progression","type":"exact"},{"name":"positive regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"stimulation of mitotic cell cycle, embryonic","type":"narrow"},{"name":"up regulation of mitotic cell cycle, embryonic","type":"exact"},{"name":"up-regulation of mitotic cell cycle, embryonic","type":"exact"},{"name":"upregulation of mitotic cell cycle, embryonic","type":"exact"}],"termid":"GO:0045977"}


id: PBO:0049339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 4","termid":"PBO:0049339"}


id: FYPO:0004337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitochondrion","termid":"FYPO:0004336"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to mitochondrion","synonyms":[{"name":"abolished protein localisation to mitochondrion","type":"exact"},{"name":"abolished protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"protein absent from mitochondrion","type":"related"},{"name":"protein localization to mitochondrion abolished","type":"exact"},{"name":"protein localization to mitochondrion abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0004337"}


id: GO:1902927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inulin.","definition_xrefs":["GOC:TermGenie","PMID:23104410","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructan catabolic process","termid":"GO:0010147"},{"relation_name":"is_a","term_name":"inulin metabolic process","termid":"GO:1902926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"inulin catabolic process","synonyms":[{"name":"inulin breakdown","type":"exact"},{"name":"inulin catabolism","type":"exact"},{"name":"inulin degradation","type":"exact"}],"termid":"GO:1902927"}


id: GO:0050096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: threo-3-methyl-L-aspartate = mesaconate + NH4.","definition_xrefs":["RHEA:12829","EC:4.3.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylaspartate ammonia-lyase activity","secondary_identifiers":["KEGG_REACTION:R03696","MetaCyc:METHYLASPARTATE-AMMONIA-LYASE-RXN"],"synonyms":[{"name":"3-methylaspartase activity","type":"related"},{"name":"L-threo-3-methylaspartate ammonia-lyase (mesaconate-forming)","type":"related"},{"name":"L-threo-3-methylaspartate ammonia-lyase activity","type":"related"},{"name":"beta-methylaspartase activity","type":"related"}],"termid":"GO:0050096"}


id: PBO:0068930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 173, pseudogene","termid":"PBO:0068930"}


id: GO:0045113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of integrin biosynthetic process","synonyms":[{"name":"regulation of integrin anabolism","type":"exact"},{"name":"regulation of integrin biosynthesis","type":"exact"},{"name":"regulation of integrin formation","type":"exact"},{"name":"regulation of integrin synthesis","type":"exact"}],"termid":"GO:0045113"}


id: PBO:0001107
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by temperature","termid":"PBO:0001107"}


id: GO:0001936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of endothelial cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"endothelial cell proliferation","termid":"GO:0001935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell proliferation","termid":"GO:0001936"}


id: GO:1905851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of backward locomotion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11717360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of locomotion","termid":"GO:0040013"},{"relation_name":"is_a","term_name":"regulation of backward locomotion","termid":"GO:0043058"},{"relation_name":"negatively_regulates","term_name":"backward locomotion","termid":"GO:0043057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of backward locomotion","synonyms":[{"name":"down regulation of backward locomotion","type":"exact"},{"name":"down-regulation of backward locomotion","type":"exact"},{"name":"downregulation of backward locomotion","type":"exact"},{"name":"inhibition of backward locomotion","type":"narrow"}],"termid":"GO:1905851"}


id: GO:0052340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction (obsolete GO:0052340)","synonyms":[{"name":"catabolism by organism of cell wall cellulose in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052340"}


id: GO:0030684
data:
  {"annotated_genes":["SJAG_04611","SJAG_03905","SJAG_01676","SJAG_01420","SJAG_04004","SJAG_01275","SJAG_03539","SJAG_04475","SJAG_00142","SJAG_03133","SJAG_00657","SJAG_01322","SJAG_02681","SJAG_02611","SJAG_02024","SJAG_00572","SJAG_02350","SJAG_02121","SJAG_04491","SJAG_02025","SJAG_00945","SJAG_00155","SJAG_02546","SJAG_01194","SJAG_03012","SJAG_04339","SJAG_02608","SJAG_02046","SJAG_01580","SJAG_00253","SJAG_02372","SJAG_02300","SJAG_03569","SJAG_02436","SJAG_02830","SJAG_01588","SJAG_03077","SJAG_03197","SJAG_01494","SJAG_00772","SJAG_01115","SJAG_00629","SJAG_03326","SJAG_02287","SJAG_01364","SJAG_00689","SJAG_03410","SJAG_04033","SJAG_01454","SJAG_05187","SJAG_03156","SJAG_02597","SJAG_00537","SJAG_04414","SJAG_04847","SJAG_03080","SJAG_04534","SJAG_04940","SJAG_01606","SJAG_00271","SJAG_01877","SJAG_01853","SJAG_00749","SJAG_01169","SJAG_00921","SJAG_00949","SJAG_02890","SJAG_06612","SJAG_01338","SJAG_04069","SJAG_02207","SJAG_00940","SJAG_01821","SJAG_00943","SJAG_03931","SJAG_03335","SJAG_02840","SJAG_02662","SJAG_03697","SJAG_00965","SJAG_02759","SJAG_03252","SJAG_01202","SJAG_01799","SJAG_01811","SJAG_03846","SJAG_03654","SJAG_05216","SJAG_01608","SJAG_03666","SJAG_00744","SJAG_01907","SJAG_03496","SJAG_04478","SJAG_04395","SJAG_03413","SJAG_04979","SJAG_04897","SJAG_01565","SJAG_01839","SJAG_04346","SJAG_00344","SJAG_00538","SJAG_03423","SJAG_04424","SJAG_04919","SJAG_04492","SJAG_00384","SJAG_01087","SJAG_00879","SJAG_02644","SJAG_03919","SJAG_02702","SJAG_01764","SJAG_02755","SJAG_04330","SJAG_02283","SJAG_03364","SJAG_03617","SJAG_05186","SJAG_01272","SJAG_03719","SJAG_00294","SJAG_03466","SJAG_01005","SJAG_00722","SJAG_00311","SJAG_00897","SJAG_03341","SJAG_04160","SJAG_03425","SJAG_02952","SJAG_00765","SJAG_04992","SJAG_01721","SJAG_02802","SJAG_04908","SJAG_02250","SJAG_02427","SJAG_01551","SJAG_02508","SJAG_02530","SJAG_02081","SJAG_02377","SJAG_03458","SJAG_03028","SJAG_04304","SJAG_00245","SJAG_03383","SJAG_01618","SJAG_00882","SJAG_00838","SJAG_00166","SJAG_04224","SJAG_05018","SJAG_00220","SJAG_00562","SJAG_00748","SJAG_04669","SJAG_03159"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84113,84217,85656,85977,86267,86268,86848,87076,87077,88411,88834,89237,89616,89617,89656,89657,90928,90929,91369,92898,92899,93246,93247,93516,93517,93537,93538,94050,94291,94292,95254,95255,95263,96489,96517,96518,96681,96878,96879,96998,97453,97454,97763,97764,97990,97991,98569,98570,98622,99017,99622,100226,100227,100916,101776,101777,102121,103570,104009,104127,104330,104331,105149,105675,105676,106431,106432,106953,107187,107188,107256,107257,107594,107785,107786,108180,108181,108297,108442,108544,108545,109060,109661,110189,110190,110690,110691,111346,111347,111489,111949,111950,112339,113070,113071,113619,113620,113786,113787,113836,113963,114145,114454,114455,114977,114978,115082,115149,115150],"is_not":false,"summary":null,"term":"GO:0030684"},{"annotations":[111888,74708,112928,103093,96294,95900,107201,103159,97657,71796,89447,93941,111365,109234,88634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030686"},{"annotations":[87535,89733,87705],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034457"},{"annotations":[88029,83968,93955],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[108593,88030,83969],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030691"},{"annotations":[99765,106239],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030692"},{"annotations":[96488,102120,106952],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070545"},{"annotations":[94045,99623,108443,112408,112835,114374,88930,113473,102122,78067,85657,94051,98623,104084,88835,115083,89238,88119,90879,95547,106954,95264,96490,86849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030687"},{"annotations":[73233,74108,93144,85065,95903,100699,103094,107204,109155,97660,99236,109061,83859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030688"},{"annotations":[104019,107931,103234,106115,111234],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034388"},{"annotations":[87391,83780,106116,110073,91783,97497,107498,102098,107205,89737,102338,111367,106242,94601,88067,103335,103095,87338,104020,105143,106712,109704,111924,108151,88658,87252,87343,106343,113595,90173,104230,87538,111235,112932,107932,111880,87709,96847,103235,85268,94868,99767,105864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032040"},{"annotations":[104543,108233,89780,108152,87206],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034456"}]},"cv_name":"cellular_component","definition":"Any complex of pre-rRNAs, ribosomal proteins, and associated proteins formed during ribosome biogenesis.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein 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id: GO:0047683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic aldehyde + NADP+ + AMP + diphosphate + H2O = an aromatic acid + NADPH + ATP.","definition_xrefs":["RHEA:19229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aryl-aldehyde dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.2.1.30","MetaCyc:1.2.1.30-RXN"],"synonyms":[{"name":"aromatic acid reductase activity","type":"related"},{"name":"aryl-aldehyde:NADP+ oxidoreductase (ATP-forming)","type":"related"}],"termid":"GO:0047683"}


id: PBO:0058883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10399","termid":"PBO:0058883"}


id: PBO:0081429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 283","termid":"PBO:0081429"}


id: PBO:0050114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 24","termid":"PBO:0050114"}


id: PBO:0069842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1128, pseudogene","termid":"PBO:0069842"}


id: GO:0070034
data:
  {"annotated_genes":["SJAG_04586","SJAG_00566","SJAG_00939","SJAG_03855","SJAG_03460","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86672,97259,104075,104262,107715,109053],"is_not":false,"summary":null,"term":"GO:0070034"}]},"cv_name":"molecular_function","definition":"Binding to the telomerase RNA template.","definition_xrefs":["GOC:krc","PMID:16884717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00566":null,"SJAG_00939":null,"SJAG_03460":null,"SJAG_03855":null,"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"telomerase RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TERC binding","type":"related"}],"termid":"GO:0070034","terms_by_termid":{"GO:0070034":null}}


id: PBO:0027032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nuclear_envelope","termid":"PBO:0027032"}


id: FYPO:0004432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone. Cells stop growing (and may die) at a concentration of 2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:18204818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to 2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone","synonyms":[{"name":"hypersensitive to 2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone","type":"exact"},{"name":"sensitive to 2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone during mitotic cell cycle","type":"related"},{"name":"sensitive to 2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone during vegetative growth","type":"exact"}],"termid":"FYPO:0004432"}


id: GO:0008358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the anterior/posterior axis of the embryo by gradients of maternally-transcribed gene products; exemplified in insects by the morphogens, bicoid and nanos.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior axis specification, embryo","termid":"GO:0008595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal determination of anterior/posterior axis, embryo","termid":"GO:0008358"}


id: MOD:00720
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxygenates an L-methionine residue to L-methionine sulfoxide R-diastereomer.","definition_xrefs":["PubMed:22116028","PubMed:23911929","RESID:AA0581","PubMed:21406390","ChEBI:45764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine (R)-sulfoxide","synonyms":[{"name":"(2S)-2-amino-4-[(R)-methylsulfinyl]butanoic acid","type":"exact"},{"name":"L-methionine (R)-S-oxide","type":"exact"},{"name":"L-methionine (R)-sulfoxide","type":"exact"},{"name":"MOD_RES Methionine (R)-sulfoxide","type":"exact"},{"name":"R-MetO","type":"exact"}],"termid":"MOD:00720"}


id: GO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the chlamydospore over time, from its formation to the mature structure. A chlamydospores is a mitotic (asexual) one-celled spore, produced primarily for survival, not dispersal, originating endogenously and singly within part of a pre-existing cell and possessing an inner secondary and often thickened cell wall. An example of this is found in Candida albicans.","definition_xrefs":["GOC:mcc","ISBN:085199377X","PMID:14663094","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chlamydospore formation","secondary_identifiers":["GO:0055027"],"synonyms":[{"name":"chlamydospore development","type":"exact"}],"termid":"GO:0001410"}


id: PBO:0078162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 39","termid":"PBO:0078162"}


id: PBO:NCBI Taxonomy id
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase organism property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxon_id","termid":"PBO:NCBI Taxonomy id"}


id: PBO:0046001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1AX pseudogene 1","termid":"PBO:0046001"}


id: GO:1900944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isoprene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"isoprene metabolic process","termid":"GO:0043611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of isoprene metabolic process","synonyms":[{"name":"regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"regulation of hemiterpene metabolic process","type":"exact"},{"name":"regulation of hemiterpene metabolism","type":"exact"},{"name":"regulation of isoprene metabolism","type":"exact"}],"termid":"GO:1900944"}


id: PBO:0003900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron sulfur cluster assembly protein (predicted)","termid":"PBO:0003900"}


id: PBO:0091532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin bimC subfamily","termid":"PBO:0091532"}


id: PBO:0082809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved 90S pre-ribosomal component; essential for proper endonucleolytic cleavage of the 35 S rRNA precursor at A0, A1, and A2 sites; contains eight WD-repeats; PWP2 deletion leads to defects in cell cycle and bud morphogenesis","termid":"PBO:0082809"}


id: PBO:0027786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation_during_nitrogen_starvation","termid":"PBO:0027786"}


id: PBO:0091312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA primary transcript","termid":"PBO:0091312"}


id: PBO:0077590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein with metallophosphoesterase domain","termid":"PBO:0077590"}


id: PBO:0031683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_peroxisome_degradation","termid":"PBO:0031683"}


id: PBO:0066137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retina and anterior neural fold homeobox 2","termid":"PBO:0066137"}


id: PBO:0055866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein associated protein 1","termid":"PBO:0055866"}


id: GO:0050564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminoadipate + L-cysteine + L-valine + 3 ATP + H2O = N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + 3 AMP + 3 diphosphate + 6 H+.","definition_xrefs":["RHEA:23196","EC:6.3.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase activity","secondary_identifiers":["MetaCyc:6.3.2.26-RXN","KEGG_REACTION:R04870"],"synonyms":[{"name":"ACV synthetase activity","type":"broad"},{"name":"L-2-aminohexanedioate:L-cysteine:L-valine ligase (AMP-forming, valine-inverting)","type":"related"},{"name":"L-alpha-aminoadipyl-cysteinyl-valine synthetase activity","type":"related"},{"name":"L-delta-(alpha-aminoadipoyl)-L-cysteinyl-D-valine synthetase activity","type":"related"}],"termid":"GO:0050564"}


id: PBO:0054520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1920","termid":"PBO:0054520"}


id: GO:0051145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary.","definition_xrefs":["CL:0000192","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle cell differentiation","synonyms":[{"name":"nonstriated muscle cell differentiation","type":"exact"}],"termid":"GO:0051145"}


id: GO:0090351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the seedling over time, beginning with seed germination and ending when the first adult leaves emerge.","definition_xrefs":["PO:0007131","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seedling development","secondary_identifiers":["PO:0008037"],"termid":"GO:0090351"}


id: PBO:0039156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 3","termid":"PBO:0039156"}


id: FYPO:0007268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cortical endoplasmic reticulum (ER) remodeling occurs to a lower extent than normal. Cortical ER remodeling is the dynamic spatial rearrangement of ER tubules near the cell cortex.","definition_xrefs":["PomBase:mah","PMID:32023460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cortical endoplasmic reticulum organization","termid":"FYPO:0007571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cortical endoplasmic reticulum remodeling","synonyms":[{"name":"decreased cortical ER remodeling","type":"exact"},{"name":"decreased cortical endoplasmic reticulum remodeling during mitotic cell cycle","type":"related"},{"name":"decreased cortical endoplasmic reticulum remodeling during vegetative growth","type":"exact"},{"name":"reduced cortical endoplasmic reticulum remodeling","type":"exact"}],"termid":"FYPO:0007268"}


id: PBO:0090321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6","termid":"PBO:0090321"}


id: PBO:0044164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiotrophin 2, pseudogene","termid":"PBO:0044164"}


id: PBO:0049087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 142","termid":"PBO:0049087"}


id: PBO:0039944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 4A","termid":"PBO:0039944"}


id: GO:0042892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chloramphenicol, a broad-spectrum antibiotic that inhibits bacterial protein synthesis, across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["PMID:29150447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"chloramphenicol transmembrane transport","synonyms":[{"name":"chloramphenicol transport","type":"broad"}],"termid":"GO:0042892"}


id: FYPO:0003422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and tapered, i.e. tapers at one end to a diameter smaller than the other, contains more than one septum, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multiseptate vegetative cell","termid":"FYPO:0001494"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, septated cell with abnormal morphology","termid":"FYPO:0002450"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated tapered cell","termid":"FYPO:0002733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000631","FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate tapered cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate bottle-shaped cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate bottle/skittle cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate skittle-shaped cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, elongated multiseptate tapered cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated multiseptate tapered cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated multiseptate tapered cell","type":"exact"}],"termid":"FYPO:0003422"}


id: PBO:0005275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase (predicted)","termid":"PBO:0005275"}


id: PBO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid14","termid":"PBO:0000284"}


id: PBO:0077936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE pseudogene 2","termid":"PBO:0077936"}


id: PBO:0091458
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YNG2","termid":"PBO:0091458"}


id: PBO:0085456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potassium transporter that mediates K+ influx; activates high-affinity Ca2+ influx system (HACS) during mating pheromone response; expression up-regulated in response to alpha factor; regulated by Ste12p during mating; localized to sites of polarized growth; member of a fungal-specific gene family; PRM6 has a paralog, KCH1, that arose from the whole genome duplication","termid":"PBO:0085456"}


id: GO:0030755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 3,5,7,3',4'-pentahydroxyflavone = S-adenosyl-L-homocysteine + 3-methoxy-5,7,3',4'-tetrahydroxy-flavone.","definition_xrefs":["EC:2.1.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"quercetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:QUERCETIN-3-O-METHYLTRANSFERASE-RXN","RHEA:17673"],"synonyms":[{"name":"S-adenosyl-L-methionine:3,5,7,3',4'-pentahydroxyflavone 3-O-methyltransferase activity","type":"related"},{"name":"flavonoid 3-methyltransferase activity","type":"related"},{"name":"flavonol 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0030755"}


id: PBO:0034563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_iron-sulfur_cluster_binding","termid":"PBO:0034563"}


id: GO:0140890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone chaperone that carries a H1 histone.","definition_xrefs":["PMID:12509435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone chaperone activity","termid":"GO:0140713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140597","GO:0140104"],"is_obsolete":false,"name":"H1 histone chaperone activity","synonyms":[{"name":"H1 histone carrier activity","type":"exact"}],"termid":"GO:0140890"}


id: GO:2001104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a heptasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"heptasaccharide transport","termid":"GO:2001104"}


id: SO:0000767
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000767 clone_insert_start (obsolete SO:0000767)","termid":"SO:0000767"}


id: GO:0051455
data:
  {"annotated_genes":["SJAG_05220","SJAG_04076","SJAG_02346","SJAG_03437","SJAG_01211","SJAG_03217","SJAG_01224","SJAG_01775","SJAG_03989","SJAG_01278","SJAG_03683","SJAG_01371","SJAG_03220","SJAG_02814","SJAG_00918","SJAG_05319","SJAG_03327","SJAG_02731","SJAG_05266","SJAG_01805","SJAG_03926","SJAG_00794","SJAG_01837","SJAG_00418"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85177,85781,87008,89853,91364,91618,93982,94710,96611,97426,98542,101604,103641,103962,105025,105288,106037,106461,106503,109396,110265,112102,113104],"is_not":false,"summary":null,"term":"GO:0051455"},{"annotations":[112869],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis I. During meiosis I sister kinetochores are lying next to each other facing the same spindle pole and monopolar attachment of the chromatid to the spindle occurs.","definition_xrefs":["GOC:tb","GOC:dph","GOC:clt","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of meiotic spindle microtubules to kinetochore","termid":"GO:0051316"},{"relation_name":"part_of","term_name":"meiotic metaphase I homologous chromosome alignment","termid":"GO:0043060"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"spindle attachment to meiosis I kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"monopolar attachment","type":"related"},{"name":"sister kinetochore mono-orientation","type":"related"}],"termid":"GO:0051455","terms_by_termid":{"GO:0051455":null,"GO:1904967":null}}


id: PR:Q9HDX9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.11c","secondary_identifiers":["UniProtKB:Q9HDX9"],"synonyms":[{"name":"GluRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EARS2","type":"exact"},{"name":"glutamyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDX9"}


id: PBO:0047884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(p14)","termid":"PBO:0047884"}


id: GO:0010384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cell wall peptidoglycan, a group of glycoproteins that consist of a core-protein backbone O-glycosylated by one or more complex carbohydrates.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall proteoglycan metabolic process","synonyms":[{"name":"cell wall proteoglycan metabolism","type":"exact"}],"termid":"GO:0010384"}


id: PBO:0067491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 625, pseudogene","termid":"PBO:0067491"}


id: PBO:0003334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3074 family protein","termid":"PBO:0003334"}


id: PBO:0085849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the ER; YBR287W is not an essential gene","termid":"PBO:0085849"}


id: GO:0045753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"regulation of acetate catabolic process","termid":"GO:0045734"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"acetate catabolic process","termid":"GO:0045733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"negative regulation of acetate catabolic process","synonyms":[{"name":"down regulation of acetate catabolic process","type":"exact"},{"name":"down-regulation of acetate catabolic process","type":"exact"},{"name":"downregulation of acetate catabolic process","type":"exact"},{"name":"inhibition of acetate catabolic process","type":"narrow"},{"name":"negative regulation of acetate breakdown","type":"exact"},{"name":"negative regulation of acetate catabolism","type":"exact"},{"name":"negative regulation of acetate degradation","type":"exact"}],"termid":"GO:0045753"}


id: PBO:0068716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 5, pseudogene","termid":"PBO:0068716"}


id: GO:0005984
data:
  {"annotated_genes":["SJAG_01209","SJAG_01862","SJAG_01531","SJAG_02131","SJAG_00129","SJAG_03824","SJAG_04859","SJAG_04301","SJAG_00182","SJAG_01646","SJAG_02949","SJAG_01427"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97688,97687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[96437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[112302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[89380,93213,62020,105041,97150,87874,92587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"},{"annotations":[107666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"},{"annotations":[87875,92588,87876,107667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005991"},{"annotations":[92589,87877,107668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070413"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any disaccharide, sugars composed of two monosaccharide units.","definition_xrefs":["GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02131":null,"SJAG_02949":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"disaccharide metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"disaccharide metabolism","type":"exact"}],"termid":"GO:0005984","terms_by_termid":{"GO:0000025":null,"GO:0005987":null,"GO:0005991":null,"GO:0005992":null,"GO:0005993":null,"GO:0005995":null,"GO:0070413":null}}


id: PBO:0031372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_nucleoid_decreased_number","termid":"PBO:0031372"}


id: PBO:0053144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6F, pseudogene","termid":"PBO:0053144"}


id: PBO:0043347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colipase","termid":"PBO:0043347"}


id: GO:1901206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901206)","synonyms":[{"name":"activation of adrenergic receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"activation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"positive regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up-regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"upregulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901206"}


id: PBO:0086839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein tyrosine phosphatase; required for cell cycle arrest in response to oxidative damage of DNA","termid":"PBO:0086839"}


id: PBO:0048182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein 3","termid":"PBO:0048182"}


id: PR:Q12381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing factor 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03357","PRO:DNx","PANTHER:PTHR11246:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor prp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.07","secondary_identifiers":["UniProtKB:Q12381"],"synonyms":[{"name":"Spom972h-PRPF6","type":"exact"}],"termid":"PR:Q12381"}


id: PBO:0085095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear import receptor; mediates the nuclear localization of proteins involved in mRNA-nucleus export; promotes dissociation of mRNAs from the nucleus-cytoplasm mRNA shuttling protein Npl3p; required for retrograde import of mature tRNAs; relocalizes from cytoplasm to the nuclear periphery upon DNA replication stress","termid":"PBO:0085095"}


id: FYPO:0005165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the spatio-temporal pattern of localization of replication forks into nuclear foci is abnormal. Normally, replication forks appear organized into foci outside the nucleolus in early S phase. As S phase progresses, the number of foci first increases, then decreases, and the remaining foci concentrate within the nucleolus or at the nucleolar periphery. The last replication foci remaining at the end of S phase are one or two large spots at the nucleolar border.","definition_xrefs":["PomBase:mah","PMID:17304223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spatio-temporal regulation of replication fork localization","synonyms":[{"name":"abnormal replication foci dynamics","type":"related"},{"name":"abnormal replication focus organization","type":"related"},{"name":"abnormal spatio-temporal regulation of replication fork localisation","type":"exact"},{"name":"abnormal spatio-temporal regulation of replication fork localization during mitotic cell cycle","type":"related"},{"name":"abnormal spatio-temporal regulation of replication fork localization during vegetative growth","type":"exact"},{"name":"abnormal spatio-temporal replication fork organization","type":"related"}],"termid":"FYPO:0005165"}


id: PBO:0079911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 1","termid":"PBO:0079911"}


id: GO:0045264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. All non-F1 subunits of the plasma membrane hydrogen-transporting ATP synthase, including integral and peripheral plasma membrane proteins.","definition_xrefs":["GOC:mtg_sensu","GOC:mah","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) (obsolete GO:0045264)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F0 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, coupling factor F(0)","type":"broad"},{"name":"proton-transporting ATP synthase complex, coupling factor F(o)","type":"broad"}],"termid":"GO:0045264"}


id: PBO:0064226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C epsilon 1 pseudogene 1","termid":"PBO:0064226"}


id: GO:0010991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of SMAD protein complex assembly. SMAD protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex that contains SMAD proteins.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SMAD protein complex assembly (obsolete GO:0010991)","termid":"GO:0010991"}


id: PBO:0088974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas1","termid":"PBO:0088974"}


id: GO:0044420
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the extracellular matrix, the structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as often seen in plants).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular matrix component (obsolete GO:0044420)","synonyms":[{"name":"extracellular matrix part","type":"exact"}],"termid":"GO:0044420"}


id: PBO:0063126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 11","termid":"PBO:0063126"}


id: SO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of transcribed_cluster defined by a set of transcribed sequences from the a unique gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcribed_cluster","termid":"SO:0001457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unigene_cluster","synonyms":[{"name":"unigene cluster","type":"related"}],"termid":"SO:0001458"}


id: PBO:0087116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome biogenesis factor; nucleolar protein associated with pre-rRNA components of the 90S preribosome, required for cleavage of pre-rRNA at A0, A1 and A2 sites; interacts with RNA helicase Dhr2p and RNA helicase-like protein Utp25p; required for incorporation of Utp25p into preribosomes","termid":"PBO:0087116"}


id: PBO:0070847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 26","termid":"PBO:0070847"}


id: GO:2000595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of optic nerve formation","synonyms":[{"name":"regulation of CN II biosynthesis","type":"related"},{"name":"regulation of CN II formation","type":"related"}],"termid":"GO:2000595"}


id: PBO:0030840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_guanine_import","termid":"PBO:0030840"}


id: PBO:0012560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 6 subunit Pre5 (predicted)","termid":"PBO:0012560"}


id: PBO:0057001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 93","termid":"PBO:0057001"}


id: GO:0004633
data:
  {"annotated_genes":["SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85412],"is_not":false,"summary":null,"term":"GO:0004633"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-[(R)-4-phosphonatopantothenoyl]-L-cysteinate + H+ = CO2 + pantetheine 4'-phosphate.","definition_xrefs":["EC:4.1.1.36","RHEA:16793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phosphopantothenoylcysteine decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:P-PANTOCYSDECARB-RXN","Reactome:R-HSA-196840","KEGG_REACTION:R03269"],"synonyms":[{"name":"4-phosphopantothenoyl-L-cysteine decarboxylase activity","type":"related"},{"name":"4-phosphopantotheoylcysteine decarboxylase activity","type":"related"},{"name":"N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase activity","type":"related"},{"name":"N-[(R)-4'-phosphopantothenoyl]-L-cysteine carboxy-lyase (pantotheine-4'-phosphate-forming)","type":"related"},{"name":"N-[(R)-4'-phosphopantothenoyl]-L-cysteine carboxy-lyase activity","type":"related"},{"name":"PPC-decarboxylase activity","type":"related"}],"termid":"GO:0004633","terms_by_termid":{"GO:0004633":null}}


id: PBO:0005641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH quinone oxidoreductase/ARE-binding protein (predicted)","termid":"PBO:0005641"}


id: PBO:0079650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 T","termid":"PBO:0079650"}


id: GO:0003941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine = pyruvate + NH3.","definition_xrefs":["EC:4.3.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-serine ammonia-lyase activity","secondary_identifiers":["MetaCyc:4.3.1.17-RXN","RHEA:19169"],"synonyms":[{"name":"L-hydroxyaminoacid dehydratase activity","type":"broad"},{"name":"L-serine ammonia-lyase (pyruvate-forming) activity","type":"related"},{"name":"L-serine deaminase activity","type":"exact"},{"name":"L-serine dehydratase activity","type":"broad"},{"name":"L-serine dehydration activity","type":"related"},{"name":"L-serine hydro-lyase (deaminating) activity","type":"exact"},{"name":"serine deaminase activity","type":"broad"}],"termid":"GO:0003941"}


id: PBO:0077599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11B","termid":"PBO:0077599"}


id: PBO:0030057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss_during_vegetative_growth","termid":"PBO:0030057"}


id: PBO:0070849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene","termid":"PBO:0070849"}


id: GO:0045596
data:
  {"annotated_genes":["SJAG_04140","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[86757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell differentiation","type":"exact"},{"name":"down-regulation of cell differentiation","type":"exact"},{"name":"downregulation of cell differentiation","type":"exact"},{"name":"inhibition of cell differentiation","type":"narrow"}],"termid":"GO:0045596","terms_by_termid":{"GO:0051517":null,"GO:0075297":null}}


id: SO:0001857
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CCAGCC, bound by the fungal transcription factor Ace2.","definition_xrefs":["PMID:16678171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ace2_UAS","synonyms":[{"name":"Ace2 upstream activating sequence","type":"exact"}],"termid":"SO:0001857"}


id: PBO:0074030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 18","termid":"PBO:0074030"}


id: FYPO:0000534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body localization is abnormal. Spindle pole body localization is the process in which a whole spindle pole body is transported to, or maintained in, a specific location.","definition_xrefs":["GO:0070631","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body localization","synonyms":[{"name":"abnormal mitotic SPB localization","type":"exact"},{"name":"abnormal mitotic spindle pole body localisation","type":"exact"},{"name":"abnormal position of mitotic spindle pole body","type":"related"},{"name":"abnormal spindle pole body localization during mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body localization during vegetative growth","type":"exact"},{"name":"position of spindle pole body: abnormal","type":"related"}],"termid":"FYPO:0000534"}


id: PBO:0066370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 13","termid":"PBO:0066370"}


id: GO:0043465
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fermentation, the anaerobic enzymatic conversion of organic compounds, especially carbohydrates, to other compounds, especially to ethyl alcohol, resulting in energy in the form of adenosine triphosphate (ATP).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"regulates","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of fermentation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043465","terms_by_termid":{"GO:2001172":null}}


id: PBO:0048386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycyl-tRNA synthetase 1","termid":"PBO:0048386"}


id: GO:0046181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ketogluconate, the anion of ketogluconic acid, an aldonic acid derived from glucose containing a ketonic carbonyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketogluconate metabolic process","termid":"GO:0019522"},{"relation_name":"is_a","term_name":"aldonic acid catabolic process","termid":"GO:0046176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0005975"],"is_obsolete":false,"name":"ketogluconate catabolic process","synonyms":[{"name":"ketogluconate breakdown","type":"exact"},{"name":"ketogluconate catabolism","type":"exact"},{"name":"ketogluconate degradation","type":"exact"}],"termid":"GO:0046181"}


id: PBO:0069517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 786, pseudogene","termid":"PBO:0069517"}


id: PBO:0048577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 1","termid":"PBO:0048577"}


id: GO:0060864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals that increases the rate or extent of floral organ abscission.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of floral organ abscission by small GTPase mediated signal transduction (obsolete GO:0060864)","termid":"GO:0060864"}


id: PBO:0057942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3667","termid":"PBO:0057942"}


id: PBO:0087611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex; required for Set1C stability and optimal activity; COMPASS methylates histone H3 on lys 4 and is involved in telomeric silencing; subunit of CPF (cleavage and polyadenylation factor), a complex involved in RNAP II transcription termination","termid":"PBO:0087611"}


id: PBO:0065983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1G","termid":"PBO:0065983"}


id: GO:0031134
data:
  {"annotated_genes":["SJAG_03543","SJAG_00302","SJAG_01211","SJAG_03048","SJAG_01775","SJAG_02451","SJAG_00930","SJAG_03989","SJAG_01082","SJAG_04412","SJAG_00335","SJAG_01371","SJAG_01297","SJAG_01837","SJAG_05266","SJAG_04259","SJAG_05319","SJAG_01224","SJAG_00082","SJAG_02814","SJAG_02731","SJAG_02336","SJAG_04140","SJAG_00678","SJAG_01601","SJAG_03437","SJAG_05220","SJAG_00918","SJAG_04623","SJAG_04076","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105287],"is_not":false,"summary":null,"term":"GO:0031134"},{"annotations":[100019,114876,98110,109951,95212,113102,90244,110263,85779,96609,103639,85175,89874,112857,106035,108776,85394,98109,104397,105023,108777,94705,109395,99662,98540,108778,87006,110663,94706,98111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990758"},{"annotations":[89848,86033,112866,107352,98484],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"The cell cycle process in which sister chromatids establish stable attachments to microtubules emanating from opposite spindle poles.","definition_xrefs":["PMID:15309047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"part_of","term_name":"sister chromatid segregation","termid":"GO:0000819"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01601":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03437":null,"SJAG_03543":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04623":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"sister chromatid biorientation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome biorientation","type":"exact"},{"name":"sister kinetochore biorientation","type":"exact"}],"termid":"GO:0031134","terms_by_termid":{"GO:0031134":null,"GO:0140429":null,"GO:1990758":null}}


id: SO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short (typically a few hundred base pairs) DNA sequence that has a single occurrence in a genome and whose location and base sequence are known.","direct_ancestors":[{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STS","synonyms":[{"name":"INSDC_feature:STS","type":"exact"},{"name":"sequence tag site","type":"exact"}],"termid":"SO:0000331"}


id: PR:O74916
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acetylornithine deacetylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04163","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase M20 domain-containing protein C757.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.05c","secondary_identifiers":["UniProtKB:O74916"],"synonyms":[{"name":"Spom972h-argE","type":"exact"}],"termid":"PR:O74916"}


id: PATO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000074 shattering (obsolete PATO:0000074)","termid":"PATO:0000074"}


id: GO:0030043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The severing of actin filaments into numerous short fragments, usually mediated by actin severing proteins.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin filament fragmentation","termid":"GO:0030043"}


id: PBO:0000505
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal signal anchor","termid":"PBO:0000505"}


id: GO:0097012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte macrophage colony-stimulating factor stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to granulocyte macrophage colony-stimulating factor","synonyms":[{"name":"response to GM-CSF","type":"exact"},{"name":"response to granulocyte macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:0097012"}


id: SO:0001884
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_translocation","termid":"SO:0001881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_translocation","synonyms":[{"name":"regulatory region translocation","type":"exact"}],"termid":"SO:0001884"}


id: PBO:0038405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within,_positive_effect","termid":"PBO:0038405"}


id: PBO:0113089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic aldehyde dehydrogenase; activated by Mg2+ and utilizes NADP+ as the preferred coenzyme; required for conversion of acetaldehyde to acetate; constitutively expressed; localizes to the mitochondrial outer surface upon oxidative stress; negative regulator of nonselective autophagy; Stb5p directly regulates the expression of ALD6 mRNA and directly binds to the ALD6 promoter","termid":"PBO:0113089"}


id: GO:0018579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protocatechuate + O2 = 4-carboxy-2-hydroxymuconate semialdehyde.","definition_xrefs":["EC:1.13.11.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"protocatechuate 4,5-dioxygenase activity","secondary_identifiers":["MetaCyc:PROTOCATECHUATE-45-DIOXYGENASE-RXN","RHEA:24044","UM-BBD_reactionID:r0144"],"synonyms":[{"name":"protocatechuate 4,5-oxygenase activity","type":"related"},{"name":"protocatechuate:oxygen 4,5-oxidoreductase (decyclizing)","type":"related"},{"name":"protocatechuic 4,5-dioxygenase activity","type":"related"},{"name":"protocatechuic 4,5-oxygenase activity","type":"related"}],"termid":"GO:0018579"}


id: PR:Q9P7L2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubx4 gene.","definition_xrefs":["UniProtKB:Q9P7L2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.11","synonyms":[{"name":"Spom972h-ubx4","type":"exact"}],"termid":"PR:Q9P7L2"}


id: PBO:0071751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 7","termid":"PBO:0071751"}


id: PBO:0073265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 9","termid":"PBO:0073265"}


id: SO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence used in experiment.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomaterial_region","termid":"SO:0001409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reagent","termid":"SO:0000695"}


id: GO:0035438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cyclic-di-GMP, cyclic dimeric guanosine monophosphate.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"},{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cyclic-di-GMP binding","synonyms":[{"name":"3',5'-cyclic di-GMP binding","type":"exact"},{"name":"c-di-GMP binding","type":"exact"},{"name":"cyclic dinucleotide di-GMP binding","type":"exact"}],"termid":"GO:0035438"}


id: GO:0052076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host ethylene-mediated defense response (obsolete GO:0052076)","synonyms":[{"name":"activation by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway","type":"broad"},{"name":"positive regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"stimulation by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"up regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"up-regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"upregulation by symbiont of host ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052076"}


id: GO:0019269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of glutamate, catalyzed by the enzyme glutamate synthase (NADPH).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate biosynthetic process, using glutamate synthase (NADPH) (obsolete GO:0019269)","synonyms":[{"name":"glutamate anabolism, using glutamate synthase (NADPH)","type":"exact"},{"name":"glutamate biosynthetic process, using glutamate synthase (NADPH)","type":"exact"},{"name":"glutamate formation, using glutamate synthase (NADPH)","type":"exact"},{"name":"glutamate synthesis, using glutamate synthase (NADPH)","type":"exact"}],"termid":"GO:0019269"}


id: PBO:0043981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation 1 like","termid":"PBO:0043981"}


id: PATO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the bearer's lacking a phosphate (PO4) group.","direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"PATO:0002262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dephosphorylated","termid":"PATO:0002263"}


id: SO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_number_variation","termid":"SO:1000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneuploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Aneuploid"],"termid":"SO:0000054"}


id: PBO:0012235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-like transcription factor and archaeal histone family protein","termid":"PBO:0012235"}


id: PBO:0057073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 153-1","termid":"PBO:0057073"}


id: PBO:0070910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 18","termid":"PBO:0070910"}


id: GO:1904257
data:
  {"annotated_genes":["SJAG_00328","SJAG_03528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86479,100436],"is_not":false,"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol across the Golgi membrane into the Golgi lumen.","definition_xrefs":["PMID:25732056","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"},{"relation_name":"is_a","term_name":"cytosol to Golgi apparatus transport","termid":"GO:0140820"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_03528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"zinc ion import into Golgi lumen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytosol to Golgi apparatus zinc transport","type":"exact"},{"name":"zinc II ion import across Golgi membrane","type":"exact"},{"name":"zinc ion import across Golgi membrane","type":"exact"},{"name":"zinc ion import into Golgi apparatus","type":"exact"},{"name":"zinc ion import into Golgi membrane","type":"related"},{"name":"zinc(2+) import across Golgi membrane","type":"exact"}],"termid":"GO:1904257","terms_by_termid":{"GO:1904257":null}}


id: SO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequencer read of a chloroplast DNA sample.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chloroplast_DNA","termid":"SO:0001033"},{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloroplast_DNA_read","synonyms":[{"name":"chloroplast DNA read","type":"exact"}],"termid":"SO:0001930"}


id: PBO:0052056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl-tRNA synthetase 1","termid":"PBO:0052056"}


id: PBO:0043585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XVII alpha 1 chain","termid":"PBO:0043585"}


id: FYPO:0002409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and undergoes a single round of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination with elongated germ tube","termid":"FYPO:0000314"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division, abnormal cell shape","termid":"FYPO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, with elongated germ tube","synonyms":[{"name":"inviable after spore germination, single cell division, elongated cell","type":"exact"},{"name":"inviable following spore germination, single cell division, with elongated, germ tube","type":"exact"},{"name":"inviable germinated spore, single cell division, with elongated germ tube","type":"exact"},{"name":"lethal after spore germination, single cell division, with elongated germ tube","type":"exact"}],"termid":"FYPO:0002409"}


id: PBO:0040310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 2","termid":"PBO:0040310"}


id: GO:0140855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-serine (position 57) + ATP = histone H3-phosphoserine (position 57) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 57 of histone H3.","definition_xrefs":["PMID:24820035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301","GO:0004672","GO:0140096"],"is_obsolete":false,"name":"histone H3S57 kinase activity","secondary_identifiers":["EC:2.7.11.1"],"synonyms":[{"name":"histone kinase activity (H3-S57 specific)","type":"exact"},{"name":"histone serine kinase activity (H3-S57 specific)","type":"exact"},{"name":"histone-serine kinase activity (H3-S57 specific)","type":"exact"}],"termid":"GO:0140855"}


id: PBO:0085475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable Hsp40p co-chaperone; has a DnaJ-like domain and appears to be involved in ER-associated degradation of misfolded proteins containing a tightly folded cytoplasmic domain; inhibits replication of Brome mosaic virus in S. cerevisiae","termid":"PBO:0085475"}


id: GO:1902933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isopentenol.","definition_xrefs":["GOC:mengo_curators","GO_REF:0000068","PMID:17693564","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isopentenol metabolic process","synonyms":[{"name":"isopentenol metabolism","type":"exact"}],"termid":"GO:1902933"}


id: PBO:0027528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_binucleate_aseptate_cell_with_mitotic_cell_cycle_arrest_in_G2_before_cell_separation","termid":"PBO:0027528"}


id: GO:0061208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"}


id: GO:0099054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynapse.","definition_xrefs":["PMID:24449494","GOC:dos","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"presynapse organization","termid":"GO:0099172"},{"relation_name":"part_of","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"presynapse assembly","synonyms":[{"name":"presynapse biogenesis","type":"exact"},{"name":"presynaptic terminal assembly","type":"exact"}],"termid":"GO:0099054"}


id: PBO:0000627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S8 (predicted)","termid":"PBO:0000627"}


id: PR:Q9UTC9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00201","PANTHER:PTHR13303:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.10","secondary_identifiers":["UniProtKB:Q9UTC9"],"synonyms":[{"name":"Spom972h-PFDN2","type":"exact"}],"termid":"PR:Q9UTC9"}


id: GO:0071648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of macrophage inflammatory protein-1 gamma.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of macrophage inflammatory protein-1 gamma production","termid":"GO:0071646"},{"relation_name":"positively_regulates","term_name":"macrophage inflammatory protein-1 gamma production","termid":"GO:0071607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage inflammatory protein-1 gamma production","synonyms":[{"name":"positive regulation of CCL9 production","type":"exact"},{"name":"positive regulation of MIP-1g production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 9 production","type":"exact"}],"termid":"GO:0071648"}


id: GO:0044769
data:
  {"annotated_genes":["SJAG_00516","SJAG_01471","SJAG_00212","SJAG_02023","SJAG_05294","SJAG_01447","SJAG_02782","SJAG_04015","SJAG_04955","SJAG_01397","SJAG_03406","SJAG_01817","SJAG_00136","SJAG_01913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100034,84073,92686,85881,98780,106016,97730,88078,114914,96029,91714,96104,95003,86194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ions from one side of a membrane to the other according to the reaction: ATP + H2O + ion(in) = ADP + phosphate + ion(out), by a rotational mechanism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled ion transmembrane transporter activity","termid":"GO:0042625"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044769","terms_by_termid":{"GO:0046961":null}}


id: GO:0140852
data:
  {"annotated_genes":["SJAG_03006","SJAG_00341","SJAG_02319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115029,112393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[90397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone substrate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin protein ligase activity","termid":"GO:0061630"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016746","GO:0004842","GO:0003824","GO:0016740","GO:0019787"],"is_obsolete":false,"name":"histone ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140852","terms_by_termid":{"GO:0140850":null,"GO:0140851":null}}


id: FYPO:0003237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of splicing of RNA primary transcripts at sites that are not normally frequently used (or not spliced at all) is increased.","definition_xrefs":["PMID:24210919","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA splicing","termid":"FYPO:0002916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"increased RNA splicing at cryptic splice sites","synonyms":[{"name":"increased RNA splicing at cryptic splice sites during mitotic cell cycle","type":"related"},{"name":"increased RNA splicing at cryptic splice sites during vegetative growth","type":"exact"},{"name":"increased RNA splicing of cryptic introns","type":"exact"}],"termid":"FYPO:0003237"}


id: GO:0030146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of renal water excretion.","definition_xrefs":["ISBN:0198506732","GOC:mah","GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete diuresis (obsolete GO:0030146)","secondary_identifiers":["Wikipedia:Diuresis"],"synonyms":[{"name":"diuresis","type":"exact"},{"name":"positive regulation of renal water excretion","type":"exact"},{"name":"renal water excretion","type":"broad"}],"termid":"GO:0030146"}


id: PBO:0082061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyanthranilic acid dioxygenase; required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p","termid":"PBO:0082061"}


id: PBO:0046551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 5","termid":"PBO:0046551"}


id: PBO:0061907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily A member 1","termid":"PBO:0061907"}


id: PBO:0061304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPEPPS pseudogene 1","termid":"PBO:0061304"}


id: GO:2000512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of granzyme A production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of production of molecular mediator of immune response","termid":"GO:0002701"},{"relation_name":"is_a","term_name":"regulation of granzyme A production","termid":"GO:2000511"},{"relation_name":"negatively_regulates","term_name":"granzyme A production","termid":"GO:0035746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of granzyme A production","termid":"GO:2000512"}


id: PBO:0004408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp7 (predicted)","termid":"PBO:0004408"}


id: PBO:0091389
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteolysis factor that Quiescence Requires","termid":"PBO:0091389"}


id: PBO:0112792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CCNDBP1 ortholog, may coordinate transcription elongation and splicing based on human interactions","termid":"PBO:0112792"}


id: PBO:0067795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 97","termid":"PBO:0067795"}


id: MOD:01038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because this represents a free amino acid and the corresponding residue is MOD:01026.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01038 norleucine (Nle) (obsolete MOD:01038)","termid":"MOD:01038"}


id: GO:1901927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cadinene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"cadinene metabolic process","termid":"GO:1901926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cadinene catabolic process","synonyms":[{"name":"cadinene breakdown","type":"exact"},{"name":"cadinene catabolism","type":"exact"},{"name":"cadinene degradation","type":"exact"}],"termid":"GO:1901927"}


id: GO:0023069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the xylem.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via xylem (obsolete GO:0023069)","synonyms":[{"name":"signal transmission via xylem","type":"exact"}],"termid":"GO:0023069"}


id: GO:0072086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the loop of Henle of the kidney nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"loop of Henle development","termid":"GO:0072070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of loop of Henle identity","secondary_identifiers":["GO:0072083"],"synonyms":[{"name":"specification of intermediate tubule identity","type":"exact"}],"termid":"GO:0072086"}


id: GO:0018723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-phenanthrol + X-SO3(-) = HX + 3-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-phenanthrol sulfotransferase activity (obsolete GO:0018723)","synonyms":[{"name":"3-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018723"}


id: PBO:0057621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1185-1","termid":"PBO:0057621"}


id: PBO:0051793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing J","termid":"PBO:0051793"}


id: GO:0052184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of hormones or growth regulators in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont hormone or growth regulator levels (obsolete GO:0052184)","synonyms":[{"name":"modulation by organism of symbiont hormone or growth regulator levels","type":"exact"}],"termid":"GO:0052184"}


id: PBO:0060328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IF","termid":"PBO:0060328"}


id: GO:0010197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The merging of the polar nuclei, the two nuclei contained within the same cell that are created from the mitotic division of the megaspore during angiosperm reproduction. Polar nuclear fusion takes place in the ovule, forming in the fusion nucleus and giving rise to the endosperm when fertilized.","definition_xrefs":["GOC:mtg_plant","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"embryo sac central cell differentiation","termid":"GO:0009559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polar nucleus fusion","termid":"GO:0010197"}


id: PBO:0055492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2926","termid":"PBO:0055492"}


id: PBO:0042722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein B","termid":"PBO:0042722"}


id: PBO:0041689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding and coiled-coil domain 2","termid":"PBO:0041689"}


id: PBQ:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"Cell quiescence, i.e. a specialized resting state in which the cells do not grow or divide, and the gene expression pattern changes globally, that a cell enters following cell cycle arrest in G2 due to glucose limitation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell quiescence","termid":"PBQ:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence following G2 arrest due to glucose limitation","synonyms":[{"name":"cellular quiescence following G2 arrest due to glucose limitation","type":"exact"},{"name":"quiescence following G2 arrest due to glucose limitation","type":"broad"}],"termid":"PBQ:0000004"}


id: MOD:01638
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces a glycine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine removal","termid":"MOD:01638"}


id: PBO:0054111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1476","termid":"PBO:0054111"}


id: PBO:0056430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 3","termid":"PBO:0056430"}


id: SO:0000491
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one VJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VJ_J_cluster","synonyms":[{"name":"(VJ)-J-CLUSTER","type":"exact"},{"name":"VJ J cluster","type":"exact"}],"termid":"SO:0000491"}


id: PBO:0064892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B''alpha","termid":"PBO:0064892"}


id: FYPO:0004530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial translation","termid":"FYPO:0004528"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitochondrial translation","synonyms":[{"name":"abolished mitochondrial protein biosynthesis","type":"exact"},{"name":"abolished mitochondrial protein synthesis","type":"exact"},{"name":"abolished mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial translation during vegetative growth","type":"exact"},{"name":"mitochondrial translation abolished","type":"exact"}],"termid":"FYPO:0004530"}


id: GO:0075259
data:
  {"annotated_genes":["SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114412],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075319"}]},"cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spore-bearing structure over time, from its formation to the mature structure. A spore-bearing structure is an anatomical structure that produces new spores.","definition_xrefs":["GOC:mcc","GOC:pamgo_curators","GOC:di","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore-bearing structure development","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fruiting structure development","type":"exact"},{"name":"sporangium development","type":"broad"},{"name":"spore-bearing organ development","type":"related"},{"name":"sporophore development","type":"exact"}],"termid":"GO:0075259","terms_by_termid":{"GO:0075319":null}}


id: GO:0038183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by bile acid binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12016314","PMID:36409000","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"bile acid signaling pathway","termid":"GO:0038183"}


id: PBO:0001127
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.2.6","termid":"PBO:0001127"}


id: PBO:0050350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 53","termid":"PBO:0050350"}


id: PBO:0109012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 13, pseudogene","termid":"PBO:0109012"}


id: PBO:0027088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatase_activity_during_cellular_response_to_adenine_starvation","termid":"PBO:0027088"}


id: PBO:0056280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2B member 2","termid":"PBO:0056280"}


id: GO:0071431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains transfer RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071431)","synonyms":[{"name":"tRNA-containing RNP export from nucleus","type":"exact"},{"name":"tRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"tRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"tRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071431"}


id: PBO:0072045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 15","termid":"PBO:0072045"}


id: GO:0060362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of an organism from one location to another through the air that is part of the organism's response to external or internal stimuli resulting in flight.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion involved in locomotory behavior","termid":"GO:0031987"},{"relation_name":"is_a","term_name":"flight","termid":"GO:0060361"},{"relation_name":"part_of","term_name":"flight behavior","termid":"GO:0007629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flight involved in flight behavior","termid":"GO:0060362"}


id: GO:0050306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 sucrose = D-glucose + 1F-beta-D-fructosylsucrose.","definition_xrefs":["MetaCyc:SUCROSE-1F-FRUCTOSYLTRANSFERASE-RXN","EC:2.4.1.99"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"sucrose 1F-fructosyltransferase activity","secondary_identifiers":["RHEA:23312","MetaCyc:RXN-1781"],"synonyms":[{"name":"SST activity","type":"related"},{"name":"sucrose 1(F)-fructosyltransferase activity","type":"related"},{"name":"sucrose-sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1'-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1(F)-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1F-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose fructosyltransferase activity","type":"related"}],"termid":"GO:0050306"}


id: GO:0009936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A group of proteins located within the cell walls of plants, both dicots and grasses, that play an essential role in loosening cell walls during cell growth. They are hydrophobic, non glycosylated proteins of about 30kDa.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete expansin (obsolete GO:0009936)","synonyms":[{"name":"expansin","type":"exact"}],"termid":"GO:0009936"}


id: PBO:0089638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Adg3","termid":"PBO:0089638"}


id: MOD:01475
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-[S-(carboxamidomethyl)phosphopantetheine]-L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O-phosphopantetheine-L-serine","termid":"MOD:00159"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-[S-(carboxamidomethyl)phosphopantetheine]-L-serine","termid":"MOD:01475"}


id: GO:0015532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: alpha-ketoglutarate(out) + H+(out) = alpha-ketoglutarate(in) + H+(in).","definition_xrefs":["TC:2.A.1.6.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transmembrane transporter activity","termid":"GO:0015139"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"alpha-ketoglutarate:proton symporter activity","synonyms":[{"name":"2-oxoglutarate:hydrogen symporter activity","type":"exact"},{"name":"2-oxoglutarate:proton symporter activity","type":"exact"},{"name":"alpha-ketoglutarate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015532"}


id: PBO:0027946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitosis","termid":"PBO:0027946"}


id: PBO:0048769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glia maturation factor gamma","termid":"PBO:0048769"}


id: GO:0072148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an epithelial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell fate commitment","termid":"GO:0072148"}


id: GO:0005188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete larval serum protein (sensu Insecta) (obsolete GO:0005188)","synonyms":[{"name":"arylphorin","type":"narrow"},{"name":"larval serum protein (sensu Insecta)","type":"exact"}],"termid":"GO:0005188"}


id: GO:1905552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to endoplasmic reticulum.","definition_xrefs":["GO_REF:0000058","PMID:22768340","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to endoplasmic reticulum","termid":"GO:1905550"},{"relation_name":"positively_regulates","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to endoplasmic reticulum","synonyms":[{"name":"activation of protein localisation in endoplasmic reticulum","type":"narrow"},{"name":"activation of protein localization in ER","type":"narrow"},{"name":"activation of protein localization in endoplasmic reticulum","type":"narrow"},{"name":"activation of protein localization to endoplasmic reticulum","type":"narrow"},{"name":"positive regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"positive regulation of protein localization in ER","type":"exact"},{"name":"positive regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"up regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"up regulation of protein localization in ER","type":"exact"},{"name":"up regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"up regulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein localization in ER","type":"exact"},{"name":"up-regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein localization in ER","type":"exact"},{"name":"upregulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein localization to endoplasmic reticulum","type":"exact"}],"termid":"GO:1905552"}


id: GO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A small disulfide-containing redox protein that serves as a general protein disulfide oxidoreductase. Interacts with a broad range of proteins by a redox mechanism, based on the reversible oxidation of 2 cysteine thiol groups to a disulfide, accompanied by the transfer of 2 electrons and 2 protons. The net result is the covalent interconversion of a disulfide and a dithiol.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin (obsolete GO:0000008)","synonyms":[{"name":"thioredoxin","type":"exact"}],"termid":"GO:0000008"}


id: PBO:0058355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4728","termid":"PBO:0058355"}


id: GO:0045829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin production","termid":"GO:0002638"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"negative regulation of B cell activation","termid":"GO:0050869"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259","GO:0010467"],"is_obsolete":false,"name":"negative regulation of isotype switching","synonyms":[{"name":"down regulation of isotype switching","type":"exact"},{"name":"down-regulation of isotype switching","type":"exact"},{"name":"downregulation of isotype switching","type":"exact"},{"name":"inhibition of isotype switching","type":"narrow"},{"name":"negative regulation of class switch recombination","type":"exact"},{"name":"negative regulation of class switching","type":"exact"},{"name":"negative regulation of isotype switch recombination","type":"exact"}],"termid":"GO:0045829"}


id: PBO:0038723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 18","termid":"PBO:0038723"}


id: FYPO:0005724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of protein methyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased protein methyltransferase activity","termid":"FYPO:0005724"}


id: GO:0098601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-Selenomethionine + H2O => Orthophosphate + Diphosphate + Se-Adenosylselenomethionine.","definition_xrefs":["PMID:2339986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"selenomethionine adenosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408551","RHEA:31211"],"termid":"GO:0098601"}


id: FYPO:0002926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and polyadenylated RNA (poly(A)RNA) does not occur. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-RNA interaction","termid":"FYPO:0002133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0002131"],"is_obsolete":false,"name":"abolished poly(A) RNA binding","synonyms":[{"name":"abolished adenosine recognition in polyA tail","type":"narrow"},{"name":"abolished polyA RNA binding","type":"exact"},{"name":"abolished polyadenylated RNA binding","type":"exact"},{"name":"abolished protein-poly(A) RNA interaction","type":"exact"},{"name":"poly(A) RNA binding abolished","type":"exact"}],"termid":"FYPO:0002926"}


id: PBO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene name conflict","termid":"PBO:0001338"}


id: PBO:0058732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6859-2","termid":"PBO:0058732"}


id: MOD:00314
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to glycine cholesterol ester.","definition_xrefs":["Unimod:432#C-term","ChEBI:143135","PubMed:8824192","RESID:AA0309","PubMed:11111088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cholesterol ester","synonyms":[{"name":"C-cholesterol","type":"related"},{"name":"LIPID Cholesterol glycine ester","type":"exact"},{"name":"cholesterol ester","type":"related"},{"name":"cholesteryl glycinate","type":"exact"},{"name":"glycine cholest-5-en-3beta-ol ester","type":"exact"},{"name":"glycine cholesterol ester","type":"exact"},{"name":"hedgehog lipophilic adduct","type":"exact"}],"termid":"MOD:00314"}


id: MOD:00745
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a selenium atom or a cluster containing selenium for hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenium containing residue","synonyms":[{"name":"SeRes","type":"exact"}],"termid":"MOD:00745"}


id: GO:0007431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity.","definition_xrefs":["GOC:jid","UBERON:0001044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"exocrine system development","termid":"GO:0035272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"salivary gland development","termid":"GO:0007431"}


id: PBO:0057678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1268b","termid":"PBO:0057678"}


id: GO:0060389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group on to a pathway restricted SMAD protein. A pathway restricted SMAD protein is an effector protein that acts directly downstream of the transforming growth factor family receptor.","definition_xrefs":["GOC:dph","ISBN:3527303782"],"gene_count":0,"genotype_count":0,"name":"obsolete pathway-restricted SMAD protein phosphorylation (obsolete GO:0060389)","synonyms":[{"name":"R-SMAD protein phosphorylation","type":"exact"},{"name":"pathway restricted SMAD protein phosphorylation","type":"exact"},{"name":"receptor regulated SMAD protein phosphorylation","type":"exact"},{"name":"receptor-regulated SMAD protein phosphorylation","type":"exact"}],"termid":"GO:0060389"}


id: PBO:0083184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the Ty1 long terminal repeat, YPRWdelta12","termid":"PBO:0083184"}


id: PBO:0045564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 12 pseudogene 1","termid":"PBO:0045564"}


id: GO:0010867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of triglyceride biosynthesis. Triglyceride biosynthesis is the collection of chemical reactions and pathways resulting in the formation of triglyceride, any triester of glycerol.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of triglyceride biosynthetic process","termid":"GO:0010866"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of triglyceride metabolic process","termid":"GO:0090208"},{"relation_name":"positively_regulates","term_name":"triglyceride biosynthetic process","termid":"GO:0019432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of triglyceride biosynthetic process","synonyms":[{"name":"positive regulation of triacylglycerol biosynthetic process","type":"exact"}],"termid":"GO:0010867"}


id: GO:0018115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of cysteine to form peptidyl-S-diphytanylglycerol diether-L-cysteine.","definition_xrefs":["PMID:7797461","RESID:AA0223"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-S-diphytanylglycerol diether-L-cysteine biosynthetic process from peptidyl-cysteine (obsolete GO:0018115)","synonyms":[{"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018115"}


id: PBO:0083562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene VID21/YDR359C","termid":"PBO:0083562"}


id: PBO:0070034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1331, pseudogene","termid":"PBO:0070034"}


id: GO:0047280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + nicotinamide mononucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + H+ + nicotinamide.","definition_xrefs":["RHEA:16149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01271","EC:2.4.2.12","MetaCyc:2.4.2.12-RXN","Reactome:R-HSA-197250"],"synonyms":[{"name":"NMN diphosphorylase activity","type":"related"},{"name":"NMN pyrophosphorylase activity","type":"related"},{"name":"NMN synthetase activity","type":"related"},{"name":"nicotinamide mononucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinamide mononucleotide synthetase activity","type":"related"},{"name":"nicotinamide-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0047280"}


id: GO:0030950
data:
  {"annotated_genes":["SJAG_02392","SJAG_00424","SJAG_02838","SJAG_03748","SJAG_00152","SJAG_04461","SJAG_00030","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84503,85467,91905,95411,96261,100769,101478,106909],"is_not":false,"summary":null,"term":"GO:0030950"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized actin-based cytoskeletal structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00424":null,"SJAG_00661":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03748":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0007163","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of actin cytoskeleton polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030950","terms_by_termid":{"GO:0030950":null}}


id: GO:0033634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion mediated by integrin","termid":"GO:0033630"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by integrin","termid":"GO:0033632"},{"relation_name":"positively_regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"positive regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033634"}


id: GO:0106280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the UDP-N-acetylglucosamine biosynthetic process.","definition_xrefs":["PMID:32579556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0106278"},{"relation_name":"positively_regulates","term_name":"UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"positive regulation of UDP-N-acetylglucosamine biosynthetic process","synonyms":[{"name":"positive egulation of UDP-N-acetylglucosamine formation","type":"related"},{"name":"positive regulation of UDP-GlcNAc biosynthetic process","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine anabolism","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine biosynthesis","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine synthesis","type":"related"}],"termid":"GO:0106280"}


id: PBO:0039503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 26 pseudogene 1","termid":"PBO:0039503"}


id: PR:Q9UTK6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tuftelin-interacting protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01334","PANTHER:PTHR23329:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain-containing protein C1486.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.03c","secondary_identifiers":["UniProtKB:Q9UTK6"],"synonyms":[{"name":"Spom972h-TFIP11","type":"exact"}],"termid":"PR:Q9UTK6"}


id: FYPO:0002737
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115551],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[115586],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[115578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115661,115662,115663],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"FYPO:0000671"},{"annotations":[115624,115566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115306,115704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[115611],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115530,115579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115552],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[115473,115471,115472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"},{"annotations":[115575,115576],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a mitotic cell cycle process normally. A mitotic cell cycle process is any of the processes that form part of the mitotic cell cycle, and thereby ensures successive accurate and complete genome replication and chromosome segregation during the vegetative growth phase of the life cycle.","definition_xrefs":["GO:0022402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle","termid":"FYPO:0000059"},{"relation_name":"is_a","term_name":"abnormal cell cycle 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mitotic cell cycle process during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle process during vegetative growth","type":"exact"}],"termid":"FYPO:0002737","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0004318":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0077894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taperin","termid":"PBO:0077894"}


id: GO:0047596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-methylsalicylate + H+ = 3-cresol + CO2.","definition_xrefs":["EC:4.1.1.52","RHEA:23112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"6-methylsalicylate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03567","MetaCyc:6-METHYLSALICYLATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"6-MSA decarboxylase activity","type":"related"},{"name":"6-methylsalicylate carboxy-lyase (3-cresol-forming)","type":"related"},{"name":"6-methylsalicylate carboxy-lyase activity","type":"related"},{"name":"6-methylsalicylic acid (2,6-cresotic acid) decarboxylase activity","type":"related"}],"termid":"GO:0047596"}


id: GO:0022881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetylgalactosamine(out) = protein histidine + N-acetylgalactosamine phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"N-acetylgalactosamine transmembrane transporter activity","termid":"GO:0015571"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0005215","GO:0022857","GO:0003824"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N-acetylgalactosamine phosphotransferase system transporter activity","synonyms":[{"name":"N-acetylgalactosamine PTS transporter activity","type":"exact"}],"termid":"GO:0022881"}


id: PBO:0062191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily Q member 3","termid":"PBO:0062191"}


id: GO:1990026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Synaptic expansion of hippocampal mossy fiber axon that makes contact with the thorny excrescences of hippocampal CA3 pyramidal cell dendrites.","definition_xrefs":["NIF_Subcellular:nlx_subcell_1005002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"},{"relation_name":"part_of","term_name":"hippocampal mossy fiber","termid":"GO:0097457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hippocampal mossy fiber expansion","synonyms":[{"name":"dentate gyrus granule cell axonal bouton","type":"related"},{"name":"dentate gyrus mossy fiber expansion","type":"related"},{"name":"mossy fiber expansion","type":"broad"}],"termid":"GO:1990026"}


id: GO:0008794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arsenate + reduced glutaredoxin = arsenite + oxidized glutaredoxin. Glutaredoxin functions as the electron donor for arsenate reduction. The electron flow therefore is ( NADPH -> glutathione reductase (EC:1.6.4.2) -> ) glutathione -> glutaredoxin -> arsenate reductase, i.e. glutathione is reduced by glutathione reductase and glutaredoxin is reduced by glutathione.","definition_xrefs":["GOC:kd","PMID:10593884","EC:1.20.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsenate reductase activity","termid":"GO:0030611"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor","termid":"GO:0030614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arsenate reductase (glutaredoxin) activity","secondary_identifiers":["RHEA:22016","MetaCyc:RXN-982","UM-BBD_reactionID:r0635"],"synonyms":[{"name":"glutharedoxin:arsenate oxidoreductase activity","type":"related"}],"termid":"GO:0008794"}


id: PBO:0047395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO34 antisense RNA 1","termid":"PBO:0047395"}


id: PBO:0066779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 77","termid":"PBO:0066779"}


id: GO:0047664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:4-aminoimidazole + H20 = imidazol-4-one + NH3.","definition_xrefs":["RHEA:22348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"aminoimidazolase activity","secondary_identifiers":["EC:3.5.4.8","MetaCyc:R13-RXN"],"synonyms":[{"name":"4-aminoimidazole aminohydrolase activity","type":"related"},{"name":"4-aminoimidazole hydrolase activity","type":"related"}],"termid":"GO:0047664"}


id: PBO:0027611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation_during_mitotic_G2_phase_resulting_in_complete_rereplication","termid":"PBO:0027611"}


id: GO:0034218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving ascospore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of ascospores.","definition_xrefs":["GOC:mah","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete ascospore wall chitin metabolic process (obsolete GO:0034218)","synonyms":[{"name":"ascospore wall chitin metabolism","type":"exact"}],"termid":"GO:0034218"}


id: PBO:0054238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1620","termid":"PBO:0054238"}


id: GO:0120086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + (3S)-(+)-asterisca-2(9),6-diene.","definition_xrefs":["PMID:27862766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(3S)-(+)-asterisca-2(9),6-diene synthase activity","synonyms":[{"name":"asterisca-2(9),6-diene synthase activity","type":"broad"}],"termid":"GO:0120086"}


id: GO:0048027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an mRNA molecule at its 5' untranslated region.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"mRNA 5'-UTR binding","synonyms":[{"name":"mRNA 5' UTR binding","type":"exact"}],"termid":"GO:0048027"}


id: GO:0035963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-13 stimulus.","definition_xrefs":["PMID:20100461","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-13","termid":"GO:0035962"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-13","synonyms":[{"name":"cellular response to IL-13","type":"exact"}],"termid":"GO:0035963"}


id: GO:0005010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with insulin-like growth factor receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140096","GO:0004672","GO:0038023","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"insulin-like growth factor receptor activity","secondary_identifiers":["EC:2.7.10.1"],"synonyms":[{"name":"IGF receptor activity","type":"exact"},{"name":"IGF-activated receptor activity","type":"exact"},{"name":"insulin-like growth factor-activated receptor activity","type":"exact"}],"termid":"GO:0005010"}


id: PBO:0062380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 2","termid":"PBO:0062380"}


id: MOD:00056
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to N-acetyl-L-isoleucine.","definition_xrefs":["RESID:AA0047","PubMed:8034631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-isoleucine","synonyms":[{"name":"(2S,3S)-2-acetamido-3-methylpentanoic acid","type":"exact"},{"name":"2-acetylamino-3-methylpentanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-methylpentanoic acid","type":"exact"},{"name":"AcIle","type":"exact"},{"name":"N-acetyl-L-isoleucine","type":"exact"},{"name":"N-acetylated L-isoleucine","type":"exact"},{"name":"acetylisoleucine","type":"exact"}],"termid":"MOD:00056"}


id: PBO:0074339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2","termid":"PBO:0074339"}


id: PBO:0076059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STON1-GTF2A1L readthrough","termid":"PBO:0076059"}


id: PBO:0055513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2947","termid":"PBO:0055513"}


id: GO:0018507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,4R)-3,4-dihydrophenanthrene-3,4-diol + NAD+ = H+ + NADH + phenanthrene-3,4-diol.","definition_xrefs":["EC:1.3.1.49","RHEA:16253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cis-3,4-dihydrophenanthrene-3,4-diol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04151","UM-BBD_reactionID:r0488","MetaCyc:1.3.1.49-RXN"],"synonyms":[{"name":"(+)-cis-3,4-dihydrophenanthrene-3,4-diol:NAD+ 3,4-oxidoreductase activity","type":"related"},{"name":"cis-3,4-dihydroxy-3,4-dihydrophenanthrene dehydrogenase activity","type":"exact"}],"termid":"GO:0018507"}


id: MOD:01634
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-aspartic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid removal","termid":"MOD:01634"}


id: PBO:0039392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMZ2 pseudogene 1","termid":"PBO:0039392"}


id: PBO:0082316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATF/CREB family basic leucine zipper (bZIP) transcription factor; binds as a homodimer to the ATF/CREB consensus sequence TGACGTCA; important for carbon source utilization; target genes include GRE2 and COS8; ACA1 has a paralog, CST6, that arose from the whole genome duplication","termid":"PBO:0082316"}


id: GO:0015367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: oxoglutarate(out) + malate(in) = oxoglutarate(in) + malate(out).","definition_xrefs":["TC:2.A.29.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transmembrane transporter activity","termid":"GO:0015139"},{"relation_name":"is_a","term_name":"malate transmembrane transporter activity","termid":"GO:0015140"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"oxoglutarate:malate antiporter activity","secondary_identifiers":["Reactome:R-HSA-376851","Reactome:R-HSA-198440"],"synonyms":[{"name":"2-oxoglutarate/malate carrier protein","type":"exact"}],"termid":"GO:0015367"}


id: PBO:0048302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 1","termid":"PBO:0048302"}


id: PR:Q9UT21
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A developmentally-regulated GTP-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00593","PRO:DNx","PANTHER:PTHR11702:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GTP-binding protein C9.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.07c","secondary_identifiers":["UniProtKB:Q9UT21"],"synonyms":[{"name":"Spom972h-DRG1","type":"exact"}],"termid":"PR:Q9UT21"}


id: PBO:0028441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_galactose_level_in_glycoprotein_glycan","termid":"PBO:0028441"}


id: PBO:0074499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptosome associated protein 47","termid":"PBO:0074499"}


id: PBO:0070144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 58 pseudogene","termid":"PBO:0070144"}


id: GO:1902732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GOC:TermGenie","PMID:23212449","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"positively_regulates","term_name":"chondrocyte proliferation","termid":"GO:0035988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chondrocyte proliferation","synonyms":[{"name":"activation of cartilage cell proliferation","type":"narrow"},{"name":"activation of chondrocyte cell proliferation","type":"narrow"},{"name":"activation of chondrocyte proliferation","type":"narrow"},{"name":"positive regulation of cartilage cell proliferation","type":"exact"},{"name":"positive regulation of chondrocyte cell proliferation","type":"exact"},{"name":"up regulation of cartilage cell proliferation","type":"exact"},{"name":"up regulation of chondrocyte cell proliferation","type":"exact"},{"name":"up regulation of chondrocyte proliferation","type":"exact"},{"name":"up-regulation of cartilage cell proliferation","type":"exact"},{"name":"up-regulation of chondrocyte cell proliferation","type":"exact"},{"name":"up-regulation of chondrocyte proliferation","type":"exact"},{"name":"upregulation of cartilage cell proliferation","type":"exact"},{"name":"upregulation of chondrocyte cell proliferation","type":"exact"},{"name":"upregulation of chondrocyte proliferation","type":"exact"}],"termid":"GO:1902732"}


id: PBO:0088957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh1","termid":"PBO:0088957"}


id: PBO:0082343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, also known as reptin; member of the AAA+ and RuvB protein families, similar to Rvb1p; conserved component of multiple complexes including the INO80 complex, the Swr1 complex, and the R2TP complex (Rvb1-Rvb2-Tah1-Pih1); involved in multiple processes such as chromatin remodeling, box C/D snoRNP assembly, and RNA polymerase II assembly","termid":"PBO:0082343"}


id: PBO:0027606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_copper_ion","termid":"PBO:0027606"}


id: PBO:0051027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 7","termid":"PBO:0051027"}


id: PR:P87174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dpb4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.09","synonyms":[{"name":"DNA polymerase II subunit D (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dpb4","type":"exact"}],"termid":"PR:P87174"}


id: GO:0034098
data:
  {"annotated_genes":["SJAG_04384","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85291,100092],"is_not":false,"summary":null,"term":"GO:0034098"}]},"cv_name":"cellular_component","definition":"A multiprotein ATPase complex required for the efficient dislocation of ER-lumenal degradation substrates, and their subsequent proteolysis by the proteasome. In budding yeast, this complex includes Cdc48p, Npl4p and Ufd1p proteins. In mammals, this complex includes a hexamer of VCP/p97 (a cytosolic ATPase) and trimers of each of its cofactors UFD1L and NPL4 (NPLOC4) (e.g. a 6:3:3 stoichiometry).","definition_xrefs":["PMID:11813000","PMID:16179952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_04384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005789","GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"VCP-NPL4-UFD1 AAA ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cdc48p-Npl4p-Ufd1p AAA ATPase complex","type":"narrow"},{"name":"p97-Ufd1-Npl4 complex","type":"exact"}],"termid":"GO:0034098","terms_by_termid":{"GO:0034098":null}}


id: PBO:0073494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-sulfoglucosamine sulfohydrolase","termid":"PBO:0073494"}


id: PR:Q09883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.12","synonyms":[{"name":"Spom972h-spn6","type":"exact"}],"termid":"PR:Q09883"}


id: GO:0019026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A single stranded RNA genome with the opposite nucleotide polarity as mRNA.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete negative sense viral genome (obsolete GO:0019026)","termid":"GO:0019026"}


id: PBO:0063070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pannexin 3","termid":"PBO:0063070"}


id: PBO:0013103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor Pvg4","termid":"PBO:0013103"}


id: PBO:0039991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 5","termid":"PBO:0039991"}


id: PATO:0000673
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000673 temperature value (obsolete PATO:0000673)","termid":"PATO:0000673"}


id: GO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyanthranilate + O2 = cis,cis-2-amino-3-(3-oxoprop-1-enyl)but-2-enedioate + H+.","definition_xrefs":["RHEA:17953","EC:1.13.11.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxyanthranilate 3,4-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R02665","UM-BBD_reactionID:r1027","Reactome:R-HSA-71218","MetaCyc:1.13.11.6-RXN"],"synonyms":[{"name":"3-hydroxyanthranilate oxygenase activity","type":"related"},{"name":"3-hydroxyanthranilate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"},{"name":"3-hydroxyanthranilic acid dioxygenase activity","type":"related"},{"name":"3-hydroxyanthranilic acid oxygenase activity","type":"related"},{"name":"3-hydroxyanthranilic oxygenase activity","type":"related"},{"name":"3HAO","type":"related"}],"termid":"GO:0000334"}


id: GO:0005958
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large protein complex which is involved in the repair of DNA double-strand breaks and, in mammals, V(D)J recombination events. It consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer Ku, the nuclear phosphoprotein XRCC4 or a homolog thereof, and DNA ligase IV.","definition_xrefs":["GOC:jl","GOC:mah","PMID:12235392","PMID:10854421","PMID:17072889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonhomologous end joining complex","termid":"GO:0070419"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA-dependent protein kinase-DNA ligase 4 complex","secondary_identifiers":["GO:0005959"],"termid":"GO:0005958"}


id: PR:O14059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1672.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.01","synonyms":[{"name":"HolPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1672.01","type":"exact"}],"termid":"PR:O14059"}


id: PBO:0065475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD12 pseudogene 1","termid":"PBO:0065475"}


id: RO:0002334
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_downstream_of_or_within","termid":"RO:0002427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated_by","termid":"RO:0002334"}


id: GO:0062127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of primary fatty amides.","definition_xrefs":["PMID:11128635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid primary amide metabolic process","termid":"GO:0062126"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid primary amide catabolic process","synonyms":[{"name":"primary fatty amide catabolic process","type":"exact"}],"termid":"GO:0062127"}


id: PR:Q9US45
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13104:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.15c","secondary_identifiers":["UniProtKB:Q9US45"],"synonyms":[{"name":"RNA polymerase II mediator complex protein pmc5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC1002.15c","type":"related"},{"name":"Spom972h-MED6","type":"exact"},{"name":"mediator complex subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pmc5","type":"related"}],"termid":"PR:Q9US45"}


id: PR:Q9Y7U1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfk1 gene.","definition_xrefs":["UniProtKB:Q9Y7U1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sfk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.01","synonyms":[{"name":"Spom972h-sfk1","type":"exact"}],"termid":"PR:Q9Y7U1"}


id: GO:0004871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer activity (obsolete GO:0004871)","synonyms":[{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity","type":"narrow"},{"name":"quorum sensing response regulator activity","type":"narrow"},{"name":"quorum sensing signal generator activity","type":"narrow"}],"termid":"GO:0004871"}


id: PBO:0071685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 17","termid":"PBO:0071685"}


id: PBO:0056967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 24-1","termid":"PBO:0056967"}


id: PBO:0080316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 80 pseudogene","termid":"PBO:0080316"}


id: PBO:0000644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex subunit Tfg3","termid":"PBO:0000644"}


id: MOD:01176
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-lysine residue and an L-lysine residue converted to allysine with a carbon-nitrogen bond to form L-dehydrolysinonorleucine.","definition_xrefs":["PubMed:16929109","RESID:AA0430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-dehydrolysinonorleucine","synonyms":[{"name":"(2S)-2-amino-6-([(5S)-5-amino-5-carboxypentylidene]amino)hexanoic acid","type":"exact"},{"name":"6-(N6-L-didehydrolysino)-L-norleucine","type":"exact"},{"name":"CROSSLNK Dehydrolysinonorleucine (Lys-Lys)","type":"exact"},{"name":"L-dehydrolysinonorleucine","type":"exact"},{"name":"N6-[(5S)-5-amino-5-carboxypentylidene]-L-lysine","type":"exact"},{"name":"XLNK6NleN6Lys","type":"exact"},{"name":"dehydrolysinorleucine [misspelling]","type":"exact"},{"name":"dehydrolysylnorleucine","type":"exact"},{"name":"didehydrolysinonorleucine","type":"exact"}],"termid":"MOD:01176"}


id: GO:0018084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of N-terminal peptidyl-serine to lactic acid.","definition_xrefs":["RESID:AA0186"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lactic acid biosynthetic process from peptidyl-serine (obsolete GO:0018084)","synonyms":[{"name":"peptidyl-lactic acid anabolism from peptidyl-serine","type":"exact"},{"name":"peptidyl-lactic acid formation from peptidyl-serine","type":"exact"},{"name":"peptidyl-lactic acid synthesis from peptidyl-serine","type":"exact"}],"termid":"GO:0018084"}


id: PBO:0017048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug45","termid":"PBO:0017048"}


id: PBO:0064582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member C","termid":"PBO:0064582"}


id: PBO:0018232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA-specific 2-thiouridylase Slm3 (predicted)","termid":"PBO:0018232"}


id: PBO:0047414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 5","termid":"PBO:0047414"}


id: GO:0106320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4R)-limonene + NADPH + H+ + O2 = NADP+ + H2O + (4R)-limonene-1,2-epoxide.","definition_xrefs":["RHEA:26097"],"gene_count":0,"genotype_count":0,"name":"obsolete (R)-limonene 1,2-monooxygenase NADPH activity (obsolete GO:0106320)","termid":"GO:0106320"}


id: GO:0047032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha-hydroxyglycyrrhetinate + NADP+ = 3-oxoglycyrrhetinate + H+ + NADPH.","definition_xrefs":["RHEA:20816","EC:1.1.1.230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-alpha-hydroxyglycyrrhetinate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04099","MetaCyc:1.1.1.230-RXN"],"synonyms":[{"name":"3alpha-hydroxyglycyrrhetinate dehydrogenase activity","type":"related"},{"name":"3alpha-hydroxyglycyrrhetinate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047032"}


id: PBO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-end-recognizing protein (predicted)","termid":"PBO:0002186"}


id: PBO:0075418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 5","termid":"PBO:0075418"}


id: PBO:0057998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3922","termid":"PBO:0057998"}


id: PBO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21 (predicted)","termid":"PBO:0002037"}


id: GO:1904748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22801495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"apoptotic process involved in development","termid":"GO:1902742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in development","synonyms":[{"name":"regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"}],"termid":"GO:1904748"}


id: PBO:0038422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-2-macroglobulin","termid":"PBO:0038422"}


id: PBO:0081941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger HIT-type containing 6","termid":"PBO:0081941"}


id: GO:0050065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + pyruvate = L-alanine + L-allysine.","definition_xrefs":["RHEA:19393","EC:2.6.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lysine-pyruvate 6-transaminase activity","secondary_identifiers":["MetaCyc:PWY-5324","KEGG_REACTION:R00453","MetaCyc:LYSINE--PYRUVATE-6-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-lysine:pyruvate aminotransferase activity","type":"related"},{"name":"Lys-AT","type":"related"},{"name":"lysine--pyruvate 6-aminotransferase activity","type":"exact"},{"name":"lysine-pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0050065"}


id: GO:0034578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: limonene + H2O = alpha-terpineol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete limonene 8-hydratase activity (obsolete GO:0034578)","termid":"GO:0034578"}


id: GO:2000776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any histone H4 acetylation that is involved in a response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000776)","synonyms":[{"name":"histone H4 acetylation of DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to genotoxic stress","type":"exact"}],"termid":"GO:2000776"}


id: GO:0061470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a mature T follicular helper cell.","definition_xrefs":["GOC:dph","PMID:21572431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell differentiation","termid":"GO:0042093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T follicular helper cell differentiation","synonyms":[{"name":"T-helper follicular cell differentiation","type":"exact"}],"termid":"GO:0061470"}


id: PBO:0002764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiE family methyltransferase (predicted)","termid":"PBO:0002764"}


id: PBO:0077441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 176A","termid":"PBO:0077441"}


id: FYPO:0004916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a catalytic activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of molecular function","termid":"FYPO:0000682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal regulation of catalytic activity","synonyms":[{"name":"abnormal regulation of catalytic activity during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of catalytic activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004916"}


id: PBO:0041775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 14","termid":"PBO:0041775"}


id: PBO:0026843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_binding_at_PCB","termid":"PBO:0026843"}


id: GO:0042953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"lipoprotein localization","termid":"GO:0044872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"lipoprotein transport","termid":"GO:0042953"}


id: PBO:0057265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 490","termid":"PBO:0057265"}


id: GO:0004103
data:
  {"annotated_genes":["SJAG_01918"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84840],"is_not":false,"summary":null,"term":"GO:0004103"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + choline = ADP + choline phosphate + 2 H+.","definition_xrefs":["RHEA:12837","EC:2.7.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"choline kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483004","KEGG_REACTION:R01021","MetaCyc:CHOLINE-KINASE-RXN"],"synonyms":[{"name":"ATP:choline phosphotransferase activity","type":"related"},{"name":"choline kinase (phosphorylating)","type":"related"},{"name":"choline phosphokinase activity","type":"related"},{"name":"choline-ethanolamine kinase activity","type":"related"}],"termid":"GO:0004103","terms_by_termid":{"GO:0004103":null}}


