# terms

id: PR:O59796
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps3 gene.","definition_xrefs":["UniProtKB:O59796","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.05","synonyms":[{"name":"Spom972h-vps3","type":"exact"}],"termid":"PR:O59796"}


id: PBO:0039534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 35","termid":"PBO:0039534"}


id: GO:0102508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3,7-di-O-beta-D-glucoside betaine + H2O = cyanidin 3-O-beta-D-glucoside betaine + beta-D-glucose.","definition_xrefs":["GOC:pz","EC:3.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3,7-diglucoside glucosidase activity","secondary_identifiers":["MetaCyc:RXN-14435"],"termid":"GO:0102508"}


id: PBO:0085382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; multidrug transporter mediates export of many different organic anions including oligomycin; homolog of human cystic fibrosis transmembrane receptor (CFTR)","termid":"PBO:0085382"}


id: PBO:0084113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase encoded by the Y' element of subtelomeric regions; highly expressed in the mutants lacking the telomerase component TLC1; potentially phosphorylated by Cdc28p","termid":"PBO:0084113"}


id: GO:0086071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an atrial cardiomyocyte to an AV node cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell to AV node cell communication","termid":"GO:0086066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell-AV node cell adhesion involved in cell communication","synonyms":[{"name":"atrial cardiomyocyte-AV node cell adhesion involved in cell communication","type":"exact"},{"name":"atrial cardiomyocyte-atrioventricular node cell adhesion involved in cell communication","type":"exact"}],"termid":"GO:0086071"}


id: GO:0086063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of an SA node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated sodium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated sodium channel activity involved in SA node cell action potential","synonyms":[{"name":"voltage-gated sodium channel activity involved in SA node cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated sodium channel activity involved in SAN cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated sodium channel activity involved in sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated sodium channel activity involved in sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0086063"}


id: PBO:0062735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 2","termid":"PBO:0062735"}


id: PBO:0049271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSG1 like 2","termid":"PBO:0049271"}


id: GO:1902299
data:
  {"annotated_genes":["SJAG_00247","SJAG_02607","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106707,99434,111190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"Any pre-replicative complex assembly that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"pre-replicative complex assembly","termid":"GO:0036388"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0044085","GO:0006259","GO:0007049","GO:0008150","GO:0006260","GO:0065003"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-RC assembly involved in cell cycle DNA replication","type":"exact"},{"name":"pre-replication complex assembly involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902299","terms_by_termid":{"GO:1902985":null}}


id: GO:0003991
data:
  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94238],"is_not":false,"summary":null,"term":"GO:0003991"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamate-5-phosphate.","definition_xrefs":["EC:2.7.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"acetylglutamate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14629","MetaCyc:ACETYLGLUTKIN-RXN"],"synonyms":[{"name":"ATP:N-acetyl-L-glutamate 5-phosphotransferase activity","type":"related"},{"name":"N-acetylglutamate 5-phosphotransferase activity","type":"related"},{"name":"N-acetylglutamate kinase activity","type":"related"},{"name":"N-acetylglutamate phosphokinase activity","type":"related"},{"name":"N-acetylglutamic 5-phosphotransferase activity","type":"related"},{"name":"acetylglutamate phosphokinase activity","type":"related"}],"termid":"GO:0003991","terms_by_termid":{"GO:0003991":null}}


id: FYPO:0006724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which movement of a protein away from Cdr2 medial cortical node complexes during a cellular response to osmotic stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:28924043","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress","synonyms":[{"name":"normal protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0006724"}


id: GO:0060634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of 4,6-pyruvylated galactose residue biosynthetic process, the chemical reactions and pathways resulting in the formation of the pyruvylated galactose residue 4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-(1->3)-. The galactose residue is part of a larger polysaccharide chain.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide biosynthetic process","termid":"GO:0032885"},{"relation_name":"regulates","term_name":"4,6-pyruvylated galactose residue biosynthetic process","termid":"GO:0051072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of 4,6-pyruvylated galactose residue biosynthetic process","termid":"GO:0060634"}


id: GO:1905532
data:
  {"annotated_genes":["SJAG_00991","SJAG_03591","SJAG_03970","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[89365,87765,94962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-leucine import across plasma membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:10467003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"L-leucine import across plasma membrane","termid":"GO:1903801"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of L-leucine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903128"],"synonyms":[{"name":"regulation of L-leucine import into cell","type":"exact"}],"termid":"GO:1905532","terms_by_termid":{"GO:1905533":null,"GO:1905534":null}}


id: PBO:0060441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 10","termid":"PBO:0060441"}


id: GO:0004291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity for peptide bonds, and a preference for a large uncharged residue in P1. Hydrolyzes peptide amides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete subtilisin activity (obsolete GO:0004291)","synonyms":[{"name":"ALK-enzyme","type":"related"},{"name":"SP 266","type":"related"},{"name":"alcalase 0.6L","type":"related"},{"name":"alcalase 2.5L","type":"related"},{"name":"alcalase activity","type":"related"},{"name":"bacillopeptidase A","type":"related"},{"name":"bacillopeptidase B","type":"related"},{"name":"bacillus subtilis alkaline proteinase activity","type":"related"},{"name":"bacillus subtilis alkaline proteinase bioprase activity","type":"related"},{"name":"bioprase AL 15","type":"related"},{"name":"bioprase APL 30","type":"related"},{"name":"colistinase activity","type":"related"},{"name":"esperase activity","type":"related"},{"name":"genenase I","type":"related"},{"name":"kazusase activity","type":"related"},{"name":"maxatase activity","type":"related"},{"name":"opticlean","type":"related"},{"name":"orientase 10B","type":"related"},{"name":"protease S","type":"related"},{"name":"protease VIII","type":"related"},{"name":"protease XXVII","type":"related"},{"name":"protin A 3L","type":"related"},{"name":"savinase 16.0L","type":"related"},{"name":"savinase 32.0 L EX","type":"related"},{"name":"savinase 4.0T","type":"related"},{"name":"savinase 8.0L","type":"related"},{"name":"savinase activity","type":"related"},{"name":"subtilisin BL","type":"related"},{"name":"subtilisin DY","type":"related"},{"name":"subtilisin E","type":"related"},{"name":"subtilisin GX","type":"related"},{"name":"subtilisin J","type":"related"},{"name":"subtilisin S41","type":"related"},{"name":"subtilisin activity","type":"exact"},{"name":"subtilisin sendai","type":"related"},{"name":"subtilopeptidase activity","type":"related"},{"name":"superase activity","type":"related"},{"name":"thermoase","type":"broad"},{"name":"thermoase PC 10","type":"related"}],"termid":"GO:0004291"}


id: GO:0004129
data:
  {"annotated_genes":["SJAG_01077","SJAG_07007","SJAG_MIT13","SJAG_03337","SJAG_02504","SJAG_01190","SJAG_00976","SJAG_01355","SJAG_MIT04","SJAG_MIT20","SJAG_05629"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84236,85257,87976,104423,110396,110823,111631,113007,115216,115242,115243,115270,115271],"is_not":false,"summary":null,"term":"GO:0004129"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O.","definition_xrefs":["RHEA:11436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_02504":null,"SJAG_03337":null,"SJAG_05629":null,"SJAG_07007":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"cytochrome-c oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CYTOCHROME-C-OXIDASE-RXN","EC:7.1.1.9","Reactome:R-HSA-163214"],"synonyms":[{"name":"Warburg's respiratory enzyme activity","type":"related"},{"name":"aa3-type cytochrome c oxidase","type":"narrow"},{"name":"ba3-type cytochrome c oxidase","type":"narrow"},{"name":"caa3-type cytochrome c oxidase","type":"narrow"},{"name":"cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"cytochrome a3 activity","type":"narrow"},{"name":"cytochrome aa3 activity","type":"narrow"},{"name":"cytochrome c oxidase activity","type":"exact"},{"name":"cytochrome oxidase activity","type":"related"},{"name":"indophenol oxidase","type":"narrow"},{"name":"indophenolase","type":"narrow"}],"termid":"GO:0004129","terms_by_termid":{"GO:0004129":null}}


id: PBO:0051107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-38-4 (non-functional)","termid":"PBO:0051107"}


id: PBO:0044866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2A","termid":"PBO:0044866"}


id: GO:0052353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of carbohydrate molecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont carbohydrate (obsolete GO:0052353)","termid":"GO:0052353"}


id: PATO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation quality inhering in a bearer by virtue of what the bearer receives as a result of being exposed to ionizing radiation.","definition_xrefs":["hps:hps"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation quality","termid":"PATO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation exposure","termid":"PATO:0001744"}


id: PR:O43004
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1603 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L16-C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.05","synonyms":[{"name":"Spom972h-rpl1603","type":"exact"}],"termid":"PR:O43004"}


id: PBO:0078465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-3","termid":"PBO:0078465"}


id: MOD:01341
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["Unimod:90#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESP-Tag light d0","termid":"MOD:00468"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESP-Tag light d0 - site K","synonyms":[{"name":"ESP","type":"related"},{"name":"ESP-Tag light d0","type":"related"}],"termid":"MOD:01341"}


id: GO:1902571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of serine-type peptidase activity.","definition_xrefs":["GOC:krc","GOC:TermGenie","PMID:20179351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of serine-type peptidase activity","synonyms":[{"name":"regulation of serine protease activity","type":"narrow"}],"termid":"GO:1902571"}


id: GO:0016485
data:
  {"annotated_genes":["SJAG_04398","SJAG_01896","SJAG_01283","SJAG_03261","SJAG_01004","SJAG_01430","SJAG_02033","SJAG_01750","SJAG_02809","SJAG_03396","SJAG_02214","SJAG_02397","SJAG_01868","SJAG_01179","SJAG_04641","SJAG_05351","SJAG_03910","SJAG_02565","SJAG_00730","SJAG_06636","SJAG_03737","SJAG_02867","SJAG_02432","SJAG_03121","SJAG_04583","SJAG_00181","SJAG_03648","SJAG_03386","SJAG_01838","SJAG_03315","SJAG_04533","SJAG_02902","SJAG_01471","SJAG_04514","SJAG_04785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85169,87645,89212,96325,99399,101880,102252,106185],"is_not":false,"summary":null,"term":"GO:0016485"},{"annotations":[85596,93411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071586"},{"annotations":[66535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016539"},{"annotations":[99189,84279,97134,107142,109578,112841,97177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034982"},{"annotations":[92480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016540"},{"annotations":[98309,88331,105334,104214,109355,101709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006627"},{"annotations":[94500,99190,104215,83684,107143,105335,108719,99938,90765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006465"},{"annotations":[94450,93464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006624"},{"annotations":[83515,87844,93709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031638"}]},"cv_name":"biological_process","definition":"Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein. Protein maturation is the process leading to the attainment of the full functional capacity of a protein.","definition_xrefs":["GOC:jsg","GOC:jl","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis","termid":"GO:0006508"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00730":null,"SJAG_01004":null,"SJAG_01179":null,"SJAG_01283":null,"SJAG_01430":null,"SJAG_01471":null,"SJAG_01750":null,"SJAG_01838":null,"SJAG_01868":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_02214":null,"SJAG_02397":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_02902":null,"SJAG_03121":null,"SJAG_03261":null,"SJAG_03315":null,"SJAG_03386":null,"SJAG_03396":null,"SJAG_03648":null,"SJAG_03737":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04514":null,"SJAG_04533":null,"SJAG_04583":null,"SJAG_04641":null,"SJAG_04785":null,"SJAG_05351":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"protein processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051605"],"synonyms":[{"name":"peptidolysis during protein maturation","type":"related"},{"name":"protein maturation by peptide bond cleavage","type":"exact"},{"name":"protein maturation by peptide bond hydrolysis","type":"exact"},{"name":"protein maturation by proteolysis","type":"related"}],"termid":"GO:0016485","terms_by_termid":{"GO:0006465":null,"GO:0006624":null,"GO:0006627":null,"GO:0016485":null,"GO:0016539":null,"GO:0016540":null,"GO:0031638":null,"GO:0034982":null,"GO:0071586":null}}


id: GO:0042051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a light-responsive receptor in the compound eye over time, from its formation to the mature structure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell development","termid":"GO:0042462"},{"relation_name":"part_of","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye photoreceptor development","synonyms":[{"name":"adult eye photoreceptor development","type":"narrow"}],"termid":"GO:0042051"}


id: PBO:0045546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 1","termid":"PBO:0045546"}


id: PBO:0110366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR pathway substrate 8, signaling adaptor","termid":"PBO:0110366"}


id: GO:0044759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont organism decreases the frequency, rate or extent of synaptic transmission, communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse, in its host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host synaptic transmission","termid":"GO:0044758"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation by symbiont of host synaptic transmission","termid":"GO:0044759"}


id: PBO:0029510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_stubby_septated_cells_(obsolete_FYPO:0002204)","termid":"PBO:0029510"}


id: PBO:0089145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, S-adenosylmethionine Pet802","termid":"PBO:0089145"}


id: FYPO:0006863
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after exposure to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability following cellular response to bleomycin","synonyms":[{"name":"decreased viability following cellular response to bleomycin","type":"exact"},{"name":"loss of cell population viability following cellular response to bleomycin","type":"exact"},{"name":"loss of viability following bleomycin exposure","type":"exact"},{"name":"reduced viability following cellular response to bleomycin","type":"related"}],"termid":"FYPO:0006863"}


id: GO:0030303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of peptide bonds in collagen with preferential cleavage where P1', P2' and P3' are hydrophobic residues; action on collagen types III, IV and V is weak.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete stromelysin 2 activity (obsolete GO:0030303)","synonyms":[{"name":"MMP-10","type":"exact"},{"name":"matrix metalloproteinase 10 activity","type":"related"},{"name":"proteoglycanase 2","type":"related"},{"name":"stromelysin 2 activity","type":"exact"},{"name":"transin 2 activity","type":"related"}],"termid":"GO:0030303"}


id: PBO:0114086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DUF3818 and PXA domain conserved fungal protein, potential lipid transport protein implicated in membrane organization and ergosterol distribution","termid":"PBO:0114086"}


id: GO:0016183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of clathrin coated pits in the presynaptic membrane endocytic zone, triggered by the presence of high concentrations of synaptic vesicle components. This process leads to, but does not include budding of the membrane to form new vesicles.","definition_xrefs":["PMID:20448150","PMID:10099709","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle coating","termid":"GO:0006901"},{"relation_name":"part_of","term_name":"synaptic vesicle budding from presynaptic endocytic zone membrane","termid":"GO:0016185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle coating","termid":"GO:0016183"}


id: PR:O13955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vam6/Vps39-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00636","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar morphogenesis protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.14","secondary_identifiers":["UniProtKB:O13955"],"synonyms":[{"name":"Spom972h-VPS39","type":"exact"},{"name":"vacuolar protein sorting-associated protein 39 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13955"}


id: PBO:0031358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_benomyl","termid":"PBO:0031358"}


id: GO:0034441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipid or protein within a plasma lipoprotein particle by oxidation of the lipid or one or more amino acids.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma lipoprotein particle oxidation","synonyms":[{"name":"plasma lipoprotein oxidation","type":"related"}],"termid":"GO:0034441"}


id: GO:0035951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of oligopeptide transport by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035951)","synonyms":[{"name":"positive regulation of oligopeptide transport by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035951"}


id: PBO:0064611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1B","termid":"PBO:0064611"}


id: PBO:0067530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 674, pseudogene","termid":"PBO:0067530"}


id: PATO:0002353
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in a bearer in virtue of its realizing one of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activation quality","termid":"PATO:0002353"}


id: PBO:0109013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 14, pseudogene","termid":"PBO:0109013"}


id: GO:0046871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to N-acetylgalactosamine, 2-acetamido-2-deoxygalactopyranose, the n-acetyl derivative of galactosamine.","definition_xrefs":["GOC:ai","PMID:18384150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"N-acetylgalactosamine binding","synonyms":[{"name":"N-acetylgalactosamine lectin","type":"related"}],"termid":"GO:0046871"}


id: FYPO:0002963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to  nuclear exosome foci is abnormal. Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PMID:23980030","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to nuclear exosome focus","synonyms":[{"name":"abnormal protein localisation to nuclear exosome focus","type":"exact"},{"name":"abnormal protein localization to MMi1 focus","type":"exact"},{"name":"abnormal protein localization to Mmi1 nuclear focus","type":"exact"},{"name":"abnormal protein localization to nuclear exosome foci","type":"exact"},{"name":"abnormal protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nuclear exosome focus during vegetative growth","type":"exact"}],"termid":"FYPO:0002963"}


id: FYPO:0003849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing fluconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on fluconazole","synonyms":[{"name":"normal cell population growth in presence of fluconazole","type":"exact"},{"name":"normal cell population growth on fluconazole","type":"exact"},{"name":"normal cellular response to fluconazole","type":"related"},{"name":"normal vegetative cell population growth on fluconazole","type":"exact"}],"termid":"FYPO:0003849"}


id: PBO:0081040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 18","termid":"PBO:0081040"}


id: GO:0006376
data:
  {"annotated_genes":["SJAG_01440","SJAG_03469","SJAG_01214","SJAG_01870","SJAG_02573","SJAG_01301","SJAG_04911","SJAG_04214","SJAG_02843","SJAG_04163","SJAG_02304","SJAG_00147","SJAG_00474","SJAG_05009","SJAG_02279","SJAG_01654","SJAG_00058","SJAG_00225","SJAG_01015","SJAG_03983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73177,103072],"is_not":false,"summary":null,"term":"GO:0006376"},{"annotations":[97339,105006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000389"},{"annotations":[101999,90973,91233,108526,91662,106778,109443,106212,98817,106793,111419,87588,93909,90047,106804,98654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000395"}]},"cv_name":"biological_process","definition":"Selection of a splice site by components of the assembling spliceosome.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00474":null,"SJAG_01015":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02573":null,"SJAG_02843":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0016071","GO:0065003","GO:0044085","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mRNA splice site recognition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spliceosomal E complex biosynthesis","type":"narrow"},{"name":"spliceosomal E complex formation","type":"narrow"},{"name":"spliceosomal commitment complex biosynthesis","type":"narrow"},{"name":"spliceosomal commitment complex formation","type":"narrow"}],"termid":"GO:0006376","terms_by_termid":{"GO:0000389":null,"GO:0000395":null,"GO:0006376":null}}


id: GO:0018689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (1/2)-unsubstituted naphthalenoid-(2/1)-sulfonate + 2 H+ + 2 e- + O2 = 1,2-dihydroxynaphthalene derivative + HSO3(-). Substrates include naphthalene-1,6-disulfonate (forms 1,2-dihydroxynaphthalene-6-sulfonate), naphthalene-1-sulfonate (forms 1,2-dihydroxynaphthalene), naphthalene-2,6-disulfonate (forms 1,2-dihydroxynaphthalene-6-sulfonate) and naphthalene-2-sulfonate (forms 1,2-dihydroxynaphthalene).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene disulfonate 1,2-dioxygenase activity (obsolete GO:0018689)","synonyms":[{"name":"naphthalene disulphonate 1,2-dioxygenase activity","type":"exact"}],"termid":"GO:0018689"}


id: GO:0098514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a high humidity stimulus is detected and converted into a molecular signal as a part of the sensory detection of high humidity.","definition_xrefs":["PMID:18269908","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity stimulus involved in sensory perception","termid":"GO:0098512"},{"relation_name":"is_a","term_name":"detection of high humidity","termid":"GO:0098516"},{"relation_name":"part_of","term_name":"sensory perception of high humidity","termid":"GO:0098510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of high humidity stimulus involved in sensory perception","termid":"GO:0098514"}


id: PBO:0080542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 1","termid":"PBO:0080542"}


id: GO:0018935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrilotriacetate, the aminotricarboxylic acid N(CH2COO-)3, that occur in the presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilotriacetate metabolic process","termid":"GO:0018934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aerobic nitrilotriacetate metabolic process","synonyms":[{"name":"aerobic nitrilotriacetate metabolism","type":"exact"}],"termid":"GO:0018935"}


id: GO:0098661
data:
  {"annotated_genes":["SJAG_01033","SJAG_01183","SJAG_01080","SJAG_03401","SJAG_04990","SJAG_00547","SJAG_02463","SJAG_03442","SJAG_01941","SJAG_01059","SJAG_04241","SJAG_00048","SJAG_01319","SJAG_01973","SJAG_00671","SJAG_01168","SJAG_00233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85527],"is_not":false,"summary":null,"term":"GO:0098661"},{"annotations":[107111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"},{"annotations":[57314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035445"},{"annotations":[96433,106266,101823,107819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902476"},{"annotations":[109907,96910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"},{"annotations":[100740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990547"},{"annotations":[84449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[111966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[105844,99905,108886,90086,112690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035435"},{"annotations":[85137,102797,110679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180042"},{"annotations":[95482],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000185"},{"annotations":[96434,106267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[61322,65137,112806,63936,65136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"}]},"cv_name":"biological_process","definition":"The process in which an inorganic anion is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"inorganic ion transmembrane transport","termid":"GO:0098660"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00233":null,"SJAG_00547":null,"SJAG_00671":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_01080":null,"SJAG_01168":null,"SJAG_01183":null,"SJAG_01319":null,"SJAG_01941":null,"SJAG_01973":null,"SJAG_02463":null,"SJAG_03401":null,"SJAG_03442":null,"SJAG_04241":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"inorganic anion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"inorganic anion membrane transport","type":"exact"},{"name":"transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:0098661","terms_by_termid":{"GO:0035435":null,"GO:0035445":null,"GO:0098661":null,"GO:0140116":null,"GO:0140159":null,"GO:0180029":null,"GO:0180042":null,"GO:1902358":null,"GO:1902434":null,"GO:1902476":null,"GO:1990547":null,"GO:1990557":null,"GO:2000185":null}}


id: GO:0160062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cutin-based cuticle over time, from its formation to the mature structure. Cutin-based cuticle is an extracellular structure composed of a covalently linked macromolecular scaffold of cutin and a variety of organic solvent-soluble lipids that are collectively termed waxes. Such structures are found on the external face of polysaccharide cell walls in land plants.","definition_xrefs":["PMID:23893170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cutin-based cuticle development","termid":"GO:0160062"}


id: PBO:0034144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_within-species_paralogy_relationship_with","termid":"PBO:0034144"}


id: PBO:0045053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEU1 antisense RNA 1","termid":"PBO:0045053"}


id: PBO:0061087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 5","termid":"PBO:0061087"}


id: PBO:0043948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta A4","termid":"PBO:0043948"}


id: GO:0106323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4S)-limonene + NADPH+= + H+ + O2 = NADP+ + H2O + (4S)-limonene-1,2-epoxide.","definition_xrefs":["RHEA:26085"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-limonene 1,2-monooxygenase NADPH activity (obsolete GO:0106323)","termid":"GO:0106323"}


id: PBO:0060787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit C1","termid":"PBO:0060787"}


id: PATO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A strength which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"strength","termid":"PATO:0001230"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased strength","synonyms":[{"name":"high strength","type":"exact"}],"termid":"PATO:0001778"}


id: PBO:0056125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LysM domain containing 2","termid":"PBO:0056125"}


id: PBO:0070601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 69","termid":"PBO:0070601"}


id: SO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one D-gene, one DJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_DJ_J_C_cluster","synonyms":[{"name":"D DJ J C cluster","type":"exact"},{"name":"D-(DJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000506"}


id: PBO:0005454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin Phb2 (predicted)","termid":"PBO:0005454"}


id: GO:0033195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkyl hydroperoxide stimulus. Alkyl hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH, where the substituent is an alkyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hydroperoxide","termid":"GO:0033194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alkyl hydroperoxide","termid":"GO:0033195"}


id: PBO:0050834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate hydrolyzing esterase 1 (putative)","termid":"PBO:0050834"}


id: PBO:0088145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088145"}


id: GO:0102485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dATP + 2 H2O = dAMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dATP phosphohydrolase activity (obsolete GO:0102485)","termid":"GO:0102485"}


id: GO:0100012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway process that regulates heart induction.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heart induction by canonical Wnt signaling pathway (obsolete GO:0100012)","termid":"GO:0100012"}


id: PBO:0057261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 487a","termid":"PBO:0057261"}


id: GO:0006161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyguanosine, a nucleoside consisting of the base guanine and the sugar deoxyribose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyguanosine metabolic process","termid":"GO:0042453"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyguanosine catabolic process","synonyms":[{"name":"deoxyguanosine breakdown","type":"exact"},{"name":"deoxyguanosine catabolism","type":"exact"},{"name":"deoxyguanosine degradation","type":"exact"}],"termid":"GO:0006161"}


id: PBO:0051619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 2 pseudogene 1","termid":"PBO:0051619"}


id: PR:P21547
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- var1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P21547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein var1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.08","synonyms":[{"name":"Spom972h-var1","type":"exact"}],"termid":"PR:P21547"}


id: PBO:0035920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_during_vegetative_growth","termid":"PBO:0035920"}


id: PBO:0069758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1041, pseudogene","termid":"PBO:0069758"}


id: PBO:0058187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4480","termid":"PBO:0058187"}


id: PBO:0077757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 20 like","termid":"PBO:0077757"}


id: PBO:0066787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 86","termid":"PBO:0066787"}


id: GO:0039669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell which occurs via retraction of the viral-bound pilus to bring the virus in contact with the host cell membrane, followed by fusion of the bacteriophage membrane with the host outer membrane.","definition_xrefs":["GOC:bf","VZ:981","GOC:jl","PMID:20427561"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus retraction and membrane fusion (obsolete GO:0039669)","termid":"GO:0039669"}


id: PBO:0060989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-homologous end joining factor 1","termid":"PBO:0060989"}


id: GO:1900493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [4Fe-4S] cluster assembly","termid":"GO:1900491"},{"relation_name":"is_a","term_name":"positive regulation of iron-sulfur cluster assembly","termid":"GO:1903331"},{"relation_name":"positively_regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0016226","GO:0044085"],"is_obsolete":false,"name":"positive regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"activation of 4Fe-4S cluster assembly","type":"narrow"},{"name":"activation of [4Fe-4S] cluster assembly","type":"narrow"},{"name":"activation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"positive regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"positive regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"up regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"up regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"up regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"up-regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"up-regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"up-regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"upregulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"upregulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"upregulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900493"}


id: GO:0061951
data:
  {"annotated_genes":["SJAG_00144","SJAG_02231","SJAG_00858","SJAG_03970","SJAG_01516","SJAG_02282","SJAG_00379","SJAG_01809","SJAG_03029","SJAG_02177","SJAG_03756","SJAG_03838","SJAG_03915","SJAG_00330","SJAG_01114","SJAG_00916","SJAG_02912","SJAG_04565","SJAG_04609"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91777],"is_not":false,"summary":null,"term":"GO:0061951"},{"annotations":[90940,114680,97221,109171,115069,108944,88308,103502,87315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[105722,103281,87191,103174,104934,91199,109173,94797,102534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[84122],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a plasma membrane.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to plasma membrane","termid":"GO:0072659"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02231":null,"SJAG_02282":null,"SJAG_02912":null,"SJAG_03029":null,"SJAG_03756":null,"SJAG_03838":null,"SJAG_03915":null,"SJAG_03970":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061951","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0061951":null,"GO:0099638":null}}


id: PBO:0091842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClC chloride channel","termid":"PBO:0091842"}


id: PBO:0068774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 11, pseudogene","termid":"PBO:0068774"}


id: PBO:0003122
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.11.1.-","termid":"PBO:0003122"}


id: GO:0007318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"pole plasm assembly","termid":"GO:0007315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"pole plasm protein localization","secondary_identifiers":["GO:0048115"],"synonyms":[{"name":"establishment and maintenance of pole plasm protein localization","type":"exact"},{"name":"oocyte pole plasm protein localization","type":"exact"},{"name":"pole plasm protein localisation","type":"exact"}],"termid":"GO:0007318"}


id: SO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a small temporal RNA (stRNA). Found in roundworm development.","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stRNA_encoding","synonyms":[{"name":"stRNA encoding","type":"exact"}],"termid":"SO:0000656"}


id: GO:1990615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that regulates actin cable formation, polarized cell growth, and cytokinesis in a formin-dependent manner. In S. cerevisiae the complex is composed of Bud14p and two Kelch family proteins, Kel1p and Kel2p.","definition_xrefs":["PMID:24828508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Kelch-containing formin regulatory complex","synonyms":[{"name":"Bud14-Kel1-Kel2 complex","type":"narrow"},{"name":"KFRC complex","type":"exact"}],"termid":"GO:1990615"}


id: GO:0050594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + tabersonine = 16-hydroxytabersonine + H2O + NADP+.","definition_xrefs":["RHEA:14133","EC:1.14.14.103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tabersonine 16-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R05855","MetaCyc:1.14.13.73-RXN"],"synonyms":[{"name":"tabersonine,NADPH:oxygen oxidoreductase (16-hydroxylating)","type":"related"}],"termid":"GO:0050594"}


id: FYPO:0004632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the second meiotic nuclear division is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiosis","termid":"FYPO:0003550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during meiosis II","synonyms":[{"name":"decreased protein accumulation during meiosis II","type":"related"},{"name":"decreased protein level during second meiotic nuclear division","type":"exact"},{"name":"reduced protein level during meiosis II","type":"exact"}],"termid":"FYPO:0004632"}


id: PATO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality of the thermal energy of a system.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature","termid":"PATO:0000146"}


id: GO:0046036
data:
  {"annotated_genes":["SJAG_05024","SJAG_00533","SJAG_03708","SJAG_02887","SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110125],"is_not":false,"summary":null,"term":"GO:0046036"},{"annotations":[83821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[96160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[88998,111081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving CTP, cytidine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_02887":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"CTP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006243"],"synonyms":[{"name":"CTP deamination","type":"narrow"},{"name":"CTP metabolism","type":"exact"}],"termid":"GO:0046036","terms_by_termid":{"GO:0006241":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null}}


id: PBO:0080265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 28 pseudogene","termid":"PBO:0080265"}


id: PBO:0072865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM and SH3 domain containing 3","termid":"PBO:0072865"}


id: PBO:0058021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3960","termid":"PBO:0058021"}


id: PBO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 44","termid":"PBO:0052752"}


id: GO:1904999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte adhesion to arterial endothelial cell.","definition_xrefs":["PMID:22267480","GOC:TermGenie","GOC:bc","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904996"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to arterial endothelial cell","termid":"GO:1904997"},{"relation_name":"positively_regulates","term_name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of leukocyte adhesion to arterial endothelial cell","synonyms":[{"name":"activation of leukocyte adhesion to arterial endothelial cell","type":"narrow"},{"name":"up regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"up-regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"upregulation of leukocyte adhesion to arterial endothelial cell","type":"exact"}],"termid":"GO:1904999"}


id: PBO:0081018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 49","termid":"PBO:0081018"}


id: PBO:0082618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a complex containing Cef1p; putatively involved in pre-mRNA splicing; has similarity to E. coli DnaJ and other DnaJ-like proteins and to S. pombe Cwf23p","termid":"PBO:0082618"}


id: PBO:0082916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome b reductase and NADH-dependent reductase for Dph3p; required for diphthamide synthesis and tRNA wobble uridine modification; also detected in mitochondria; mutation in conserved NADH binding domain of the human ortholog results in type I methemoglobinemia","termid":"PBO:0082916"}


id: PBO:0055933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 39","termid":"PBO:0055933"}


id: PBO:0046113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1","termid":"PBO:0046113"}


id: PBO:0058664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6792","termid":"PBO:0058664"}


id: PBO:0060171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated scaffold protein 1","termid":"PBO:0060171"}


id: PBO:0063827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired like homeobox 2B","termid":"PBO:0063827"}


id: MOD:01726
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01726"}


id: GO:0099522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"cytosolic region","synonyms":[{"name":"region of cytosol","type":"exact"}],"termid":"GO:0099522"}


id: GO:0010680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of coumarin.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in coumarin metabolism (obsolete GO:0010680)","termid":"GO:0010680"}


id: PR:O13862
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- deb1 gene.","definition_xrefs":["UniProtKB:O13862","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator protein rdp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B1.01","synonyms":[{"name":"Spom972h-deb1","type":"exact"},{"name":"rhp51-DRE-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13862"}


id: GO:0098001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process by which a bacteriophage, using its tail fibers, spikes or a baseplate component, initially recognizes and binds to its specific receptor on the host cell surface. This process is reversible and allows the release of a bacteriophage without affecting infection.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion receptor-mediated virion attachment to host cell","termid":"GO:0098671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor-mediated bacteriophage reversible attachment to host cell","synonyms":[{"name":"phage reversible adsorption","type":"related"},{"name":"reversible bacteriophage attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:0098001"}


id: PBO:0077244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 5A","termid":"PBO:0077244"}


id: GO:0055016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hypochord over time, from its formation to the mature structure. The hypochord is a transient rod-like structure in the embryos of fish, lampreys and amphibians that is located immediately ventral to the notochord. The hypochord may play a role in positioning the dorsal aorta.","definition_xrefs":["GOC:devbiol","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypochord development","synonyms":[{"name":"subnotochordal rod development","type":"exact"}],"termid":"GO:0055016"}


id: PBO:0061309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 1","termid":"PBO:0061309"}


id: PBO:0091764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type region non-coding RNA","termid":"PBO:0091764"}


id: PBO:0088209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Novel ORF identified via pan-genome analysis; conserved in other strains of S. cerevisiae","termid":"PBO:0088209"}


id: PBO:0041891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catsper channel auxiliary subunit zeta","termid":"PBO:0041891"}


id: GO:0061092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["GOC:dph","GOC:jh","GOC:tb","PMID:19966303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid transport","termid":"GO:2001140"},{"relation_name":"positively_regulates","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipid translocation","termid":"GO:0061092"}


id: PATO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being in a position that produces a separation in, or acting to separate, another entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separating","termid":"PATO:0002525"}


id: PR:O94435
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug35 gene.","definition_xrefs":["UniProtKB:O94435","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 35 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.01c","synonyms":[{"name":"Spom972h-mug35","type":"exact"}],"termid":"PR:O94435"}


id: GO:0030731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanidinoacetate = S-adenosyl-L-homocysteine + creatine + H+.","definition_xrefs":["EC:2.1.1.2","RHEA:10656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01883","MetaCyc:GUANIDINOACETATE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"GA methylpherase activity","type":"related"},{"name":"S-adenosyl-L-methionine:N-guanidinoacetate methyltransferase activity","type":"related"},{"name":"guanidinoacetate methyltransferase activity","type":"related"},{"name":"guanidinoacetate transmethylase activity","type":"related"},{"name":"guanidoacetate methyltransferase activity","type":"related"},{"name":"methionine-guanidinoacetic transmethylase activity","type":"related"}],"termid":"GO:0030731"}


id: PBO:0015218
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SEC14","termid":"PBO:0015218"}


id: PBO:0109625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 79 (pseudogene)","termid":"PBO:0109625"}


id: PBO:0084664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 5'-3' exonuclease and sliding exonuclease; required for mitochondrial genome maintenance; distantly related to the RecB nuclease domain of bacterial RecBCD recombinases; may be regulated by the transcription factor Ace2","termid":"PBO:0084664"}


id: PBO:0056393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein RP/EB family member 1","termid":"PBO:0056393"}


id: PBO:0073863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A9 antisense RNA 2","termid":"PBO:0073863"}


id: GO:0048215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Golgi vesicle fusion to target membrane.","definition_xrefs":["GOC:jid","PMID:10219233","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of Golgi vesicle fusion to target membrane","termid":"GO:0048214"},{"relation_name":"positively_regulates","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"positive regulation of Golgi vesicle fusion to target membrane","synonyms":[{"name":"activation of Golgi vesicle fusion to target membrane","type":"narrow"},{"name":"stimulation of Golgi vesicle fusion to target membrane","type":"narrow"},{"name":"up regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"up-regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"upregulation of Golgi vesicle fusion to target membrane","type":"exact"}],"termid":"GO:0048215"}


id: PBO:0086432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein; member of DUP240 gene family; green fluorescent protein (GFP)-fusion protein localizes to the plasma membrane in a punctate pattern","termid":"PBO:0086432"}


id: PBO:0063020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase","termid":"PBO:0063020"}


id: PBO:0073179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 1","termid":"PBO:0073179"}


id: PBO:0113021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of fatty acid synthetase; complex catalyzes the synthesis of long-chain saturated fatty acids; contains acetyltransacylase, dehydratase, enoyl reductase, malonyl transacylase, and palmitoyl transacylase activities; specific target of the broad-spectrum antifungal NPD6433","termid":"PBO:0113021"}


id: RO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has phenotype","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenotype_of","termid":"RO:0002201"}


id: PBO:0044767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 50 pseudogene 1","termid":"PBO:0044767"}


id: FYPO:0007286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the late endosome membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:12868054","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to late endosome","termid":"FYPO:0007725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to late endosome membrane","synonyms":[{"name":"normal protein localisation to late endosome membrane","type":"exact"},{"name":"normal protein localization to late endosome membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to late endosome membrane during vegetative growth","type":"exact"},{"name":"normal protein localization to prevacuolar compartment membrane","type":"exact"}],"termid":"FYPO:0007286"}


id: PBO:0080046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 19","termid":"PBO:0080046"}


id: PBO:0045792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER degradation enhancing alpha-mannosidase like protein 2","termid":"PBO:0045792"}


id: GO:0061463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction O-acetyl-ADP-ribose + H2O = ADP-ribose + acetate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0019213","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"O-acetyl-ADP-ribose deacetylase activity","termid":"GO:0061463"}


id: FYPO:0003377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to nitrosative stress is lower than normal. Total RNA or a specific RNA may be affected. Nitrosative stress often results from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GO:0071500","PomBase:mah","PMID:20204527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to nitrosative stress","synonyms":[{"name":"decreased RNA accumulation during cellular response to nitrosative stress","type":"related"},{"name":"decreased RNA level during cellular response to nitrosative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to nitrosative stress during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to nitrosative stress","type":"narrow"},{"name":"decreased transcript level during cellular response to nitrosative stress","type":"exact"},{"name":"reduced RNA level during cellular response to nitrosative stress","type":"exact"}],"termid":"FYPO:0003377"}


id: RO:0002111
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"releases_neurotransmitter","termid":"RO:0002111"}


id: PBO:0074883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 62A","termid":"PBO:0074883"}


id: SO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variation that increases or decreases the copy number of a given region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_alteration","termid":"SO:0000248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_variation","secondary_identifiers":["http://en.wikipedia.org/wiki/Copy_number_variation"],"synonyms":[{"name":"CNP","type":"exact"},{"name":"CNV","type":"exact"},{"name":"copy number polymorphism","type":"exact"},{"name":"copy number variation","type":"exact"}],"termid":"SO:0001019"}


id: GO:0070162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of adiponectin, a protein hormone, by adipose tissue.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"adiponectin secretion","termid":"GO:0070162"}


id: GO:0004369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + O2 = glycerone phosphate + H2O2.","definition_xrefs":["EC:1.1.3.21","RHEA:18369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphate oxidase activity","secondary_identifiers":["KEGG_REACTION:R00846","MetaCyc:GLYCEROL-3-PHOSPHATE-OXIDASE-RXN"],"synonyms":[{"name":"L-alpha-glycerol-3-phosphate oxidase activity","type":"related"},{"name":"L-alpha-glycerophosphate oxidase activity","type":"related"},{"name":"alpha-glycerophosphate oxidase activity","type":"related"},{"name":"glycerol phosphate oxidase activity","type":"related"},{"name":"glycerol-1-phosphate oxidase activity","type":"related"},{"name":"sn-glycerol-3-phosphate:oxygen 2-oxidoreductase activity","type":"related"}],"termid":"GO:0004369"}


id: PBO:0004197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Aps2 (predicted)","termid":"PBO:0004197"}


id: PBO:0073493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase 2","termid":"PBO:0073493"}


id: GO:1902329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication termination that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication termination","termid":"GO:1902294"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"bacterial-type DNA replication termination","synonyms":[{"name":"DNA replication termination involved in bacterial-type DNA replication","type":"exact"}],"termid":"GO:1902329"}


id: GO:0018905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethyl ether, CH3-O-CH3, the simplest ether. Dimethyl ether, also known wood ether and methyl ether, is a colorless gas that has been used in refrigeration applications.","definition_xrefs":["UM-BBD_pathwayID:dme"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dimethyl ether metabolic process","synonyms":[{"name":"dimethyl ether metabolism","type":"exact"},{"name":"methyl ether metabolic process","type":"exact"},{"name":"methyl ether metabolism","type":"exact"}],"termid":"GO:0018905"}


id: PBO:0084967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase; plays a catalytic role in oxidation of cytoplasmic one-carbon units; expression is regulated by Bas1p and Bas2p, repressed by adenine, and may be induced by inositol and choline","termid":"PBO:0084967"}


id: SO:0001820
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A coding sequence variant where the change does not alter the frame of the transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_variant","termid":"SO:0001650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe_indel","synonyms":[{"name":"inframe change in CDS length","type":"exact"},{"name":"inframe indel","type":"exact"}],"termid":"SO:0001820"}


id: GO:0102125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A9 + O2 + H+ + NAD(P)H = 16alpha, 17-epoxy gibberellin A9 + H2O + NAD(P).","definition_xrefs":["GOC:pz","EC:1.14.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gibberellin A9 16alpha,17 epoxidase activity","secondary_identifiers":["MetaCyc:RXN-11388"],"termid":"GO:0102125"}


id: GO:0015693
data:
  {"annotated_genes":["SJAG_02578","SJAG_00211","SJAG_01639","SJAG_03516","SJAG_02484"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"},{"annotations":[86250,56735,103722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903830"},{"annotations":[103448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045016"}]},"cv_name":"biological_process","definition":"The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00211":null,"SJAG_01639":null,"SJAG_02484":null,"SJAG_02578":null,"SJAG_03516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"magnesium ion transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"magnesium transport","type":"related"}],"termid":"GO:0015693","terms_by_termid":{"GO:0045016":null,"GO:1903830":null,"GO:1990616":null}}


id: GO:0050389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucurono-6,2-lactone + H2O = D-glucuronate.","definition_xrefs":["EC:3.1.1.19","MetaCyc:URONOLACTONASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"uronolactonase activity","secondary_identifiers":["RHEA:13337"],"synonyms":[{"name":"D-glucurono-6,2-lactone lactonohydrolase activity","type":"related"},{"name":"glucuronolactonase activity","type":"related"}],"termid":"GO:0050389"}


id: PBO:0043109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin target of PRMT1","termid":"PBO:0043109"}


id: FYPO:0000726
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115427,115439],"is_not":false,"summary":null,"term":"FYPO:0000726"},{"annotations":[115718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":3,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to oxidative stress","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_04312","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","pka1delta","atf1delta"],"synonyms":[{"name":"decreased growth during cellular response to oxidative stress","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to oxidative stress","type":"exact"},{"name":"hypersensitive to oxidative stress","type":"exact"},{"name":"oxidative stress resistance: decreased","type":"related"},{"name":"sensitive to oxidative stress during mitotic cell cycle","type":"related"},{"name":"sensitive to oxidative stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000726","terms_by_termid":{"FYECO:0000078":null,"FYPO:0000087":null,"FYPO:0000726":null,"FYPO_EXT:0000001":null}}


id: MOD:00346
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-phenylalanine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-phenylalanine.","definition_xrefs":["PubMed:3936839","RESID:AA0341","PubMed:12696888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(S-L-cysteinyl)-D-phenylalanine","synonyms":[{"name":"(2S)-2-amino-2-[(2R)-2-amino-2-carboxyethyl]sulfanyl-3-phenylpropanoic acid","type":"exact"},{"name":"(2S,5R)-2,5-diamino-3-thia-2-phenylmethylhexanedioic acid","type":"exact"},{"name":"2-(L-cystein-S-yl)-D-phenylalanine","type":"exact"},{"name":"CROSSLNK 2-cysteinyl-D-phenylalanine (Cys-Phe)","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-D-phenylalanine","type":"exact"}],"termid":"MOD:00346"}


id: GO:0052246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near a second organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis on or near other organism involved in symbiotic interaction (obsolete GO:0052246)","synonyms":[{"name":"positive energy taxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052246"}


id: PBO:0085549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; required for ribosome assembly and 20S pre-rRNA processing; mutations confer cryptopleurine resistance; homologous to mammalian ribosomal protein S14 and bacterial S11; RPS14B has a paralog, RPS14A, that arose from the whole genome duplication","termid":"PBO:0085549"}


id: PBO:0080372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set pre-B cell surrogate light chain 1","termid":"PBO:0080372"}


id: GO:0006006
data:
  {"annotated_genes":["SJAG_02796","SJAG_03370","SJAG_02369","SJAG_02297","SJAG_00134","SJAG_06621","SJAG_00605","SJAG_03660","SJAG_03903","SJAG_03373","SJAG_04495","SJAG_01414","SJAG_03828","SJAG_02945","SJAG_01402","SJAG_02107","SJAG_02135","SJAG_00839","SJAG_02696","SJAG_04192","SJAG_02148","SJAG_00027","SJAG_00461","SJAG_04334","SJAG_03743","SJAG_05006","SJAG_02009","SJAG_01310","SJAG_03822","SJAG_06622","SJAG_00240"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90573,92962,93053,112014,114627],"is_not":false,"summary":null,"term":"GO:0006006"},{"annotations":[90571,94351,100587,105068,105532,91062,105530,105065,101947,101580,105531,105071,105533,101581,99498,105066,105067,105070,105534,99760,101582,101946,105069,105536,112532,94071,105535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[94808,110779,84540,94807,110778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[92642],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[95117],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010906"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00134":null,"SJAG_00240":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_01402":null,"SJAG_01414":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02297":null,"SJAG_02369":null,"SJAG_02696":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03370":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05006":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular glucose metabolic process","type":"exact"},{"name":"glucose metabolism","type":"exact"}],"termid":"GO:0006006","terms_by_termid":{"GO:0006006":null,"GO:0010906":null,"GO:0019655":null,"GO:0061621":null,"GO:2001172":null}}


id: PBO:0050225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 3","termid":"PBO:0050225"}


id: GO:0031955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain fatty acid + ATP + CoA = a short-chain fatty acyl-CoA + AMP + diphosphate. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["RHEA:52860","PMID:34904027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid-CoA ligase activity","termid":"GO:0120515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"short-chain fatty acid-CoA ligase activity","synonyms":[{"name":"short-chain fatty acid activation","type":"related"},{"name":"short-chain fatty-acid-CoA ligase activity","type":"exact"},{"name":"short-chain-fatty-acid-CoA ligase activity","type":"exact"}],"termid":"GO:0031955"}


id: FYPO:0005906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cgontractile ring contraction begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah","PMID:19570908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"},{"relation_name":"is_a","term_name":"normal actomyosin contractile ring contraction","termid":"FYPO:0004097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of actomyosin contractile ring contraction","synonyms":[{"name":"normal dwell time before actomyosin contractile ring contraction","type":"exact"},{"name":"normal onset of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"normal onset of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"normal onset of contractile ring contraction","type":"exact"},{"name":"normal onset of cytokinetic contractile ring contraction","type":"exact"},{"name":"normal onset of cytokinetic ring contraction","type":"related"},{"name":"normal onset of mitotic contractile ring contraction","type":"exact"},{"name":"normal timing of actomyosin contractile ring contraction","type":"related"}],"termid":"FYPO:0005906"}


id: PBO:0075625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRING1 pseudogene 2","termid":"PBO:0075625"}


id: PBO:0081917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 886, pseudogene","termid":"PBO:0081917"}


id: GO:0060319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Erythrocyte differentiation which occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"},{"relation_name":"part_of","term_name":"primitive hemopoiesis","termid":"GO:0060215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive erythrocyte differentiation","synonyms":[{"name":"primitive RBC differentiation","type":"exact"},{"name":"primitive erythropoiesis","type":"exact"},{"name":"primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0060319"}


id: GO:0005658
data:
  {"annotated_genes":["SJAG_04994","SJAG_05239","SJAG_02627","SJAG_02172"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93494,95497,101447,113517],"is_not":false,"summary":null,"term":"GO:0005658"}]},"cv_name":"cellular_component","definition":"A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which are capable of catalyzing the synthesis of an RNA primer on the lagging strand of replicating DNA and the subsequent synthesis of a small stretch of DNA. The smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis.","definition_xrefs":["GOC:mah","PMID:11395402","PMID:26975377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase complex","termid":"GO:0042575"},{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"nuclear replisome","termid":"GO:0043601"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02172":null,"SJAG_02627":null,"SJAG_04994":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"alpha DNA polymerase:primase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA polymerase alpha:primase complex","type":"exact"},{"name":"heterotetrameric polymerase alpha holoenzyme","type":"exact"},{"name":"pol-prim","type":"related"},{"name":"primosome","type":"broad"}],"termid":"GO:0005658","terms_by_termid":{"GO:0005658":null}}


id: PBO:0058788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7157","termid":"PBO:0058788"}


id: GO:0006808
data:
  {"annotated_genes":["SJAG_04268","SJAG_03319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84878,110000],"is_not":false,"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nitrogen utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03319":null,"SJAG_04268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitrogen utilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006808","terms_by_termid":{"GO:0006808":null}}


id: PBO:0032754
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gap for YPt","termid":"PBO:0032754"}


id: PR:Q9UT83
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 28 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.07","synonyms":[{"name":"Spom972h-mug28","type":"exact"}],"termid":"PR:Q9UT83"}


id: GO:0102216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + a maltodextrin = AMP + hydrogenphosphate + a 6-phosphogluco-maltodextrin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete maltodextrin water dikinase (obsolete GO:0102216)","termid":"GO:0102216"}


id: PBO:0050378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 2","termid":"PBO:0050378"}


id: PR:Q09789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G6.13 gene.","definition_xrefs":["UniProtKB:Q09789","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G6.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.13","synonyms":[{"name":"Spom972h-SPAC13G6.13","type":"exact"}],"termid":"PR:Q09789"}


id: PBO:0091869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate lyase superfamily, unknown specificity, bacterial 3-carboxy-cis,cis-muconate cycloisomerase related","termid":"PBO:0091869"}


id: FYPO:0000790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin cortical patch.","definition_xrefs":["GO:0044396","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin cortical patch organization","synonyms":[{"name":"abnormal F-actin patch organization","type":"exact"},{"name":"abnormal actin cortical patch organisation","type":"exact"},{"name":"abnormal actin cortical patch organization during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch organization during vegetative growth","type":"exact"},{"name":"abnormal actin patch organization","type":"exact"}],"termid":"FYPO:0000790"}


id: PBO:0042206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin I","termid":"PBO:0042206"}


id: PBO:0027840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_in_stationary_phase_during_nitrogen_limitation","termid":"PBO:0027840"}


id: GO:0035311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell in the larval wing imaginal disc becomes capable of differentiating autonomously into a wing cell, if left in its normal environment.","definition_xrefs":["PMID:10860999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"wing and notum subfield formation","termid":"GO:0035309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing cell fate specification","termid":"GO:0035311"}


id: PBO:0050795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 5A","termid":"PBO:0050795"}


id: GO:0072307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"regulates","term_name":"metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072307"}


id: PBO:0030715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glucosyltransferase_activity","termid":"PBO:0030715"}


id: GO:0008075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate.","definition_xrefs":["EC:4.6.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor guanylate cyclase activity (obsolete GO:0008075)","synonyms":[{"name":"receptor guanylate cyclase activity","type":"exact"}],"termid":"GO:0008075"}


id: FYPO:0003094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere outer repeat region are present at lower levels than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased centromeric outer repeat transcript level","synonyms":[{"name":"decreased accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"decreased accumulation of centromeric outer repeat transcripts during vegetative growth","type":"related"},{"name":"decreased accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"decreased centromere outer repeat transcript level","type":"exact"},{"name":"decreased centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"decreased centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"decreased centromeric outer repeat-derived transcript level","type":"exact"},{"name":"decreased level of centromeric outer repeat transcripts","type":"exact"},{"name":"reduced centromeric outer repeat transcript level","type":"exact"}],"termid":"FYPO:0003094"}


id: PBO:0027271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_5_residues_during_vegetative_growth","termid":"PBO:0027271"}


id: PBO:0058150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4445","termid":"PBO:0058150"}


id: GO:1904326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of circadian sleep/wake cycle, wakefulness.","definition_xrefs":["GOC:TermGenie","PMID:10923657","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, wakefulness","termid":"GO:0010840"},{"relation_name":"is_a","term_name":"negative regulation of circadian rhythm","termid":"GO:0042754"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, wakefulness","termid":"GO:0042746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, wakefulness","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, wakefulness","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, wakefulness","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, wakefulness","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, wakefulness","type":"narrow"}],"termid":"GO:1904326"}


id: PBO:0029995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septation_index","termid":"PBO:0029995"}


id: PR:000085734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been phosphorylated on Ser-10. UniProtKB:P10651, 2-136, Ser-11, MOD:00046.","definition_xrefs":["PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Phos(S10)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Ser-11, MOD:00046","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/Phos:1","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Ser-11, MOD:00046","type":"exact"},{"name":"hht3/Phos(S10)","type":"exact"}],"termid":"PR:000085734"}


id: PATO:0001047
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001047 absolute resistance (obsolete PATO:0001047)","termid":"PATO:0001047"}


id: GO:0047079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyuridine + 2-oxoglutarate + O2 = 2-deoxy-D-ribono-1,4-lactone + CO2 + succinate + uracil.","definition_xrefs":["RHEA:23316","EC:1.14.11.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"deoxyuridine 1'-dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.11.10-RXN","KEGG_REACTION:R02486"],"synonyms":[{"name":"2'-deoxyuridine,2-oxoglutarate:oxygen oxidoreductase (1'-hydroxylating)","type":"related"},{"name":"pyrimidine-deoxynucleoside 1'-dioxygenase activity","type":"broad"},{"name":"pyrimidine-deoxynucleoside,2-oxoglutarate 1'-dioxygenase activity","type":"broad"}],"termid":"GO:0047079"}


id: PBO:0051040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant alpha 1","termid":"PBO:0051040"}


id: PBO:0044095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A3","termid":"PBO:0044095"}


id: PBO:0082124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acid phosphatase; involved in the non-vesicular transport of sterols in both directions between the endoplasmic reticulum and plasma membrane; deletion confers sensitivity to nickel","termid":"PBO:0082124"}


id: PBO:0071634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 53","termid":"PBO:0071634"}


id: GO:0030825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cGMP metabolic process (obsolete GO:0030825)","synonyms":[{"name":"activation of cGMP metabolic process","type":"narrow"},{"name":"positive regulation of cGMP metabolism","type":"exact"},{"name":"stimulation of cGMP metabolic process","type":"narrow"},{"name":"up regulation of cGMP metabolic process","type":"exact"},{"name":"up-regulation of cGMP metabolic process","type":"exact"},{"name":"upregulation of cGMP metabolic process","type":"exact"}],"termid":"GO:0030825"}


id: PBO:0091262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER alcohol acetyltransferase involved in intermembrane phospholipid transfer","termid":"PBO:0091262"}


id: FYPO:0004618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable astral microtubules.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubules absent from cell","termid":"FYPO:0004702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"astral microtubules absent from cell","synonyms":[{"name":"absent astral microtubules","type":"exact"},{"name":"astral microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"astral microtubules absent from cell during vegetative growth","type":"exact"},{"name":"cytoplasmic astral microtubules absent from cell","type":"exact"}],"termid":"FYPO:0004618"}


id: GO:0019300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of rhamnose, the hexose 6-deoxy-L-mannose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnose metabolic process","termid":"GO:0019299"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"rhamnose biosynthetic process","synonyms":[{"name":"rhamnose formation","type":"exact"},{"name":"rhamnose synthesis","type":"exact"},{"name":"rhamnose anabolism","type":"exact"},{"name":"rhamnose biosynthesis","type":"exact"}],"termid":"GO:0019300"}


id: PBO:0049928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan-alpha-glucosaminide N-acetyltransferase","termid":"PBO:0049928"}


id: PBO:0045856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 46","termid":"PBO:0045856"}


id: PBO:0046052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F","termid":"PBO:0046052"}


id: GO:0050079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate = propynoate + H2O.","definition_xrefs":["RHEA:17957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetylenecarboxylate hydratase activity","secondary_identifiers":["EC:4.2.1.27","GO:0047607","MetaCyc:MALONATE-SEMIALDEHYDE-DEHYDRATASE-RXN"],"synonyms":[{"name":"3-oxopropanoate hydro-lyase (propynoate-forming)","type":"related"},{"name":"3-oxopropanoate hydro-lyase activity","type":"related"},{"name":"acetylenecarboxylate hydratase activity, producing malonate-semialdehyde","type":"narrow"},{"name":"acetylenemonocarboxylate hydrase activity","type":"related"},{"name":"acetylenemonocarboxylate hydratase activity","type":"broad"},{"name":"acetylmonocarboxylic acid hydrase activity","type":"related"},{"name":"alkynoate hydratase activity","type":"broad"},{"name":"malonate-semialdehyde dehydratase activity","type":"related"}],"termid":"GO:0050079"}


id: GO:0043638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of puromycin, an aminonucleoside antibiotic that is a potent inhibitor of translation; produced by the bacterium Streptomyces alboniger.","definition_xrefs":["Wikipedia:Puromycin","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"puromycin metabolic process","termid":"GO:0043637"},{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"puromycin biosynthetic process","termid":"GO:0043638"}


id: GO:0061163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The endoplasmic reticulum organization process that results in the structure of the endoplasmic reticulum being oriented in the cell. Endoplasmic reticulum polarization serves as a mechanism to compartmentalize cellular activities and to establish cell polarity.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum polarization","secondary_identifiers":["GO:0061164","GO:0061166","GO:0061167","GO:0061165"],"synonyms":[{"name":"ER localization involved in ER polarization at cell division site","type":"narrow"},{"name":"ER polarization","type":"exact"},{"name":"endoplasmic reticulum localisation involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"endoplasmic reticulum localization involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"establishment of endoplasmic reticulum localisation involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"establishment of endoplasmic reticulum localization involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"maintenance of endoplasmic reticulum location involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"transitional endoplasmic reticulum polarization at cell division site","type":"narrow"}],"termid":"GO:0061163"}


id: GO:0140490
data:
  {"annotated_genes":["SJAG_00856","SJAG_01756","SJAG_03835","SJAG_01215","SJAG_02886","SJAG_02609"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96175,102571,104996,105755,106731,113378],"is_not":false,"summary":null,"term":"GO:0140490"}]},"cv_name":"molecular_function","definition":"The action of a molecule that provides a shape mimicking the end of a microtubule to seed the formation of a new microtubule via self-assembly.","definition_xrefs":["PMID:21993292","PMID:20631709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular template activity","termid":"GO:0140489"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02886":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"microtubule nucleator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule nucleation template activity","type":"exact"}],"termid":"GO:0140490","terms_by_termid":{"GO:0140490":null}}


id: GO:0036286
data:
  {"annotated_genes":["SJAG_02626","SJAG_02087"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87924,114337],"is_not":false,"summary":null,"term":"GO:0036286"}]},"cv_name":"cellular_component","definition":"A filamentous cortical structure formed, in S. pombe, by the eisosome component Pil1.","definition_xrefs":["GOC:vw","PMID:23722945","PMID:21900489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cortical cytoskeleton","termid":"GO:0030863"},{"relation_name":"part_of","term_name":"eisosome","termid":"GO:0032126"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02087":null,"SJAG_02626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"eisosome filament","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"linear eisosome","type":"exact"}],"termid":"GO:0036286","terms_by_termid":{"GO:0036286":null}}


id: GO:0060479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features of a mature cell found in the lung. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung cell differentiation","synonyms":[{"name":"pulmonary cell differentiation","type":"exact"}],"termid":"GO:0060479"}


id: GO:0052912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanine(748) in 23S rRNA = N(1)-methylguanine(748) in 23S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N1-)-methyltransferase activity","termid":"GO:0008989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"23S rRNA (guanine(748)-N(1))-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11599","RHEA:42904"],"synonyms":[{"name":"23S rRNA m(1)G(748) methyltransferase activity","type":"broad"}],"termid":"GO:0052912"}


id: PR:Q9USP5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI-anchor transamidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12000:SF1","OMA:SCHPO04689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchor transamidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.02c","secondary_identifiers":["UniProtKB:Q9USP5"],"synonyms":[{"name":"GPI transamidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGK","type":"exact"}],"termid":"PR:Q9USP5"}


id: PBO:0017530
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of Sporulation Abnormal mutant","termid":"PBO:0017530"}


id: PBO:0036537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic R3H and G-patch domain protein Sqs2","termid":"PBO:0036537"}


id: GO:0001617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete growth hormone secretagogue-like receptor activity (obsolete GO:0001617)","synonyms":[{"name":"growth hormone secretagogue-like receptor activity","type":"exact"}],"termid":"GO:0001617"}


id: PR:Q9US03
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US03"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.10","synonyms":[{"name":"Spom972h-klp2","type":"exact"}],"termid":"PR:Q9US03"}


id: FYPO:0006014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one cell forms multiple mating projections that engage multiple partner cells.","definition_xrefs":["PomBase:mah","PMID:28410370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0001985"],"is_obsolete":false,"name":"promiscuous mating","synonyms":[{"name":"conjugation with multiple partner cells","type":"exact"},{"name":"formation of multiple mating projections","type":"related"},{"name":"formation of multiple shmoos","type":"related"},{"name":"mating with multiple partner cells","type":"exact"},{"name":"promiscuous conjugation","type":"exact"}],"termid":"FYPO:0006014"}


id: PBO:0088527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase Fol3","termid":"PBO:0088527"}


id: PBO:0005483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc7","termid":"PBO:0005483"}


id: PBO:0050761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 23","termid":"PBO:0050761"}


id: PBO:0004623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate kinase (predicted)","termid":"PBO:0004623"}


id: GO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor recycling","termid":"GO:0001919"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"negatively_regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of receptor recycling","synonyms":[{"name":"down regulation of receptor recycling","type":"exact"},{"name":"down-regulation of receptor recycling","type":"exact"},{"name":"downregulation of receptor recycling","type":"exact"},{"name":"inhibition of receptor recycling","type":"narrow"}],"termid":"GO:0001920"}


id: GO:0015330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glutamine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-glutamine transmembrane transporter activity","termid":"GO:0015186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity glutamine transmembrane transporter activity","synonyms":[{"name":"high affinity glutamine permease activity","type":"related"},{"name":"high affinity glutamine transmembrane transporter activity","type":"exact"}],"termid":"GO:0015330"}


id: GO:0009492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2Fe-2S electron transfer carrier (obsolete GO:0009492)","synonyms":[{"name":"2Fe-2S electron transfer carrier","type":"exact"}],"termid":"GO:0009492"}


id: GO:0070614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tungstate (WO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tungstate is a bivalent oxoanion of tungsten.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tungstate ion transport","termid":"GO:0070614"}


id: GO:0018222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-L-cysteine methyl disulfide.","definition_xrefs":["RESID:AA0101"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-cysteine methyl disulfide biosynthetic process from peptidyl-cysteine (obsolete GO:0018222)","synonyms":[{"name":"peptidyl-L-cysteine methyl disulfide anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine methyl disulfide formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine methyl disulfide synthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine methyl disulphide biosynthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine methyl disulphide biosynthetic process from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018222"}


id: GO:0034879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3,6-trihydroxyisonicotinate = 2,3,6-trihydroxypyridine + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3,6-trihydroxyisonicotinate decarboxylase activity (obsolete GO:0034879)","termid":"GO:0034879"}


id: GO:0140260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitochondrial proton-transporting ATP synthase complex.","definition_xrefs":["PMID:12110673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex binding","termid":"GO:0140260"}


id: PR:Q9USJ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.06c gene.","definition_xrefs":["UniProtKB:Q9USJ6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H-dependent FMN reductase C4B3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.06c","synonyms":[{"name":"FMN reductase C4B3.06c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FMN reductase [NAD(P)H] (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC4B3.06c","type":"exact"},{"name":"azoreductase C4B3.06c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USJ6"}


id: GO:0042819
data:
  {"annotated_genes":["SJAG_01543","SJAG_00707","SJAG_01881","SJAG_00252","SJAG_00283","SJAG_01383","SJAG_00691"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[111870,95777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[110559,96962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[83758,91549,63539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[91550,83760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["PMID:16157873","PMID:30671974","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"vitamin B6 biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyridoxine-5'-phosphate biosynthesis","type":"related"},{"name":"vitamin B6 anabolism","type":"exact"},{"name":"vitamin B6 biosynthesis","type":"exact"},{"name":"vitamin B6 formation","type":"exact"},{"name":"vitamin B6 synthesis","type":"exact"}],"termid":"GO:0042819","terms_by_termid":{"GO:0008615":null,"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042821":null,"GO:0042823":null}}


id: GO:0097616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the type IV pilus-dependent motility of a symbiont organism (i.e. the controlled movement of a bacterial cell which is dependent on the presence of type IV pili, and which includes social gliding motility and twitching motility). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12037568","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont type IV pilus-dependent motility","termid":"GO:0097615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by host of symbiont type IV pilus-dependent motility","synonyms":[{"name":"positive regulation by host of bacterial type IV pilus-dependent motility","type":"exact"}],"termid":"GO:0097616"}


id: GO:0035763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the dorsal motor nucleus of the vagus nerve. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve morphogenesis","termid":"GO:0035762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve structural organization","synonyms":[{"name":"dorsal motor nucleus of vagus nerve structural organisation","type":"exact"}],"termid":"GO:0035763"}


id: PBO:0056880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10-NBL1 readthrough","termid":"PBO:0056880"}


id: PBO:0042547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 11B","termid":"PBO:0042547"}


id: GO:0005295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neutral L-amino acid(out) + Na+(out) = neutral L-amino acid(in) + Na+(in).","definition_xrefs":["TC:2.A.23.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"neutral L-amino acid:sodium symporter activity","secondary_identifiers":["GO:0005282"],"synonyms":[{"name":"neutral amino acid-sodium cotransporter","type":"broad"},{"name":"neutral amino acid:sodium symporter activity","type":"exact"},{"name":"sodium/neutral amino acid transporter","type":"broad"}],"termid":"GO:0005295"}


id: GO:0060994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the kidney progresses from its initial formation to the mature state.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in kidney development (obsolete GO:0060994)","termid":"GO:0060994"}


id: PBO:0059899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 22","termid":"PBO:0059899"}


id: GO:0051691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages, as carried out by individual cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular oligosaccharide metabolic process (obsolete GO:0051691)","synonyms":[{"name":"cellular oligosaccharide metabolism","type":"exact"}],"termid":"GO:0051691"}


id: GO:0001301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any chromatin organization process that occurs during the lifespan of the cell that results in changes in chromatin structure. Such changes may lead to gene dysregulation and ultimately to a loss in cell homeostasis, bringing about an aging phenotype.","definition_xrefs":["PMID:12044938","GOC:vw","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete progressive alteration of chromatin involved in cell aging (obsolete GO:0001301)","synonyms":[{"name":"age-dependent accumulation of genetic damage","type":"related"},{"name":"progressive alteration of chromatin during cell ageing","type":"exact"},{"name":"progressive alteration of chromatin during cell aging","type":"related"}],"termid":"GO:0001301"}


id: GO:0021503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of the neural fold elevations that results in the movement of the tips of the elevations towards each other in order to fuse.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","GOC:dph","PMID:15806586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"neural fold formation","termid":"GO:0001842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold bending","termid":"GO:0021503"}


id: GO:0061468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound intermediate cleavage-stage structure of individual or groups of chromosomes that coalesces and fuses with other karyomeres to form a nucleus during interphase. Karyomere formation occurs in blastomeres undergoing rapid cell division.","definition_xrefs":["GOC:dph","PMID:12734396","PMID:22863006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"karyomere","termid":"GO:0061468"}


id: PBO:0056551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCL1 apoptosis regulator, BCL2 family member","termid":"PBO:0056551"}


id: PBO:0067611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 783, pseudogene","termid":"PBO:0067611"}


id: PBO:0042180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1 interacting protein 1","termid":"PBO:0042180"}


id: PBO:0063268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 14","termid":"PBO:0063268"}


id: PBO:0073469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFXN4 pseudogene 1","termid":"PBO:0073469"}


id: PBO:0046271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 10","termid":"PBO:0046271"}


id: PBO:0056660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 27","termid":"PBO:0056660"}


id: GO:0043655
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space within a host but external to the plasma membrane of host cells, e.g. within host bloodstream.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cellular component","termid":"GO:0018995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host extracellular space","synonyms":[{"name":"extracellular space of host","type":"exact"}],"termid":"GO:0043655"}


id: GO:1900302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of laminarabiose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of laminarabiose transport (obsolete GO:1900302)","synonyms":[{"name":"activation of laminarabiose transport","type":"narrow"},{"name":"up regulation of laminarabiose transport","type":"exact"},{"name":"up-regulation of laminarabiose transport","type":"exact"},{"name":"upregulation of laminarabiose transport","type":"exact"}],"termid":"GO:1900302"}


id: PBO:0062892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXA1L mitochondrial inner membrane protein","termid":"PBO:0062892"}


id: PBO:0053470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 434","termid":"PBO:0053470"}


id: PBO:0064512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit J4, pseudogene","termid":"PBO:0064512"}


id: GO:0019317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fucose (6-deoxygalactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose metabolic process","termid":"GO:0006004"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fucose catabolic process","secondary_identifiers":["MetaCyc:FUCCAT-PWY"],"synonyms":[{"name":"fucose breakdown","type":"exact"},{"name":"fucose catabolism","type":"exact"},{"name":"fucose degradation","type":"exact"}],"termid":"GO:0019317"}


id: GO:0060225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal rod cell. A retinal rod cell is one of the two photoreceptor subtypes in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate commitment","termid":"GO:0010455"},{"relation_name":"is_a","term_name":"positive regulation of photoreceptor cell differentiation","termid":"GO:0046534"},{"relation_name":"is_a","term_name":"regulation of retinal rod cell fate commitment","termid":"GO:0060224"},{"relation_name":"positively_regulates","term_name":"retinal rod cell fate commitment","termid":"GO:0060223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retinal rod cell fate commitment","termid":"GO:0060225"}


id: PBO:0085631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in fluoride export; nearly identical to FEX2, and deletion of both proteins results in a large increase in fluoride sensitivity compared with the single mutant; contains two FEX domains connected by a linker; part of a widespread family of conserved fluoride export proteins","termid":"PBO:0085631"}


id: PBO:0045936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A1","termid":"PBO:0045936"}


id: PR:Q9Y7N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rox3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7N2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.05c","synonyms":[{"name":"RNA polymerase II mediator complex protein rox3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rox3","type":"exact"},{"name":"mediator complex subunit 19 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7N2"}


id: PBO:0071282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 5","termid":"PBO:0071282"}


id: GO:0001755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell migration","termid":"GO:0090497"},{"relation_name":"part_of","term_name":"neural crest cell development","termid":"GO:0014032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell migration","termid":"GO:0001755"}


id: PBO:0073198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEM1 26S proteasome subunit","termid":"PBO:0073198"}


id: GO:0021562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vestibulocochlear nerve over time, from its formation to the mature structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve development","synonyms":[{"name":"CN VIII development","type":"exact"},{"name":"acoustic nerve development","type":"exact"},{"name":"cranial nerve 8 development","type":"exact"},{"name":"cranial nerve VIII development","type":"exact"}],"termid":"GO:0021562"}


id: PBO:0052007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JDP2 antisense RNA 1","termid":"PBO:0052007"}


id: PR:O43009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug110 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 110 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.10c","synonyms":[{"name":"Spom972h-mug110","type":"exact"}],"termid":"PR:O43009"}


id: PBO:0066307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ pseudogene 1","termid":"PBO:0066307"}


id: PBO:0047467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 6 pseudogene 1","termid":"PBO:0047467"}


id: PBO:0091986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote Wtf23","termid":"PBO:0091986"}


id: PBO:0053319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 92","termid":"PBO:0053319"}


id: FYPO:0004456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to nucleus","synonyms":[{"name":"increased protein localisation to nucleus","type":"exact"}],"termid":"FYPO:0004456"}


id: PBO:0066800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 99","termid":"PBO:0066800"}


id: PBO:0046780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA transcriptional coactivator and phosphatase 1","termid":"PBO:0046780"}


id: GO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-glutamate import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"positively_regulates","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of L-glutamate import across plasma membrane","secondary_identifiers":["GO:1900922"],"synonyms":[{"name":"activation of L-glutamate import","type":"narrow"},{"name":"activation of L-glutamate transport","type":"narrow"},{"name":"activation of L-glutamate uptake","type":"narrow"},{"name":"positive regulation of L-glutamate import","type":"broad"},{"name":"positive regulation of L-glutamate transport","type":"broad"},{"name":"positive regulation of L-glutamate uptake","type":"related"},{"name":"stimulation of L-glutamate transport","type":"narrow"},{"name":"up regulation of L-glutamate import","type":"exact"},{"name":"up regulation of L-glutamate transport","type":"broad"},{"name":"up regulation of L-glutamate uptake","type":"related"},{"name":"up-regulation of L-glutamate import","type":"exact"},{"name":"up-regulation of L-glutamate transport","type":"exact"},{"name":"up-regulation of L-glutamate uptake","type":"related"},{"name":"upregulation of L-glutamate import","type":"exact"},{"name":"upregulation of L-glutamate transport","type":"broad"},{"name":"upregulation of L-glutamate uptake","type":"related"}],"termid":"GO:0002038"}


id: GO:0048184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to the peptide hormone follistatin.","definition_xrefs":["GOC:jid","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete follistatin binding (obsolete GO:0048184)","synonyms":[{"name":"follistatin binding","type":"exact"}],"termid":"GO:0048184"}


id: PBO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 73","termid":"PBO:0052806"}


id: GO:0061704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a sucrose into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.","definition_xrefs":["GOC:glycolysis","GOC:dph","PMID:15012287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"},{"relation_name":"is_a","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0055086","GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glycolytic process from sucrose","termid":"GO:0061704"}


id: PBO:0041577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 open reading frame 91","termid":"PBO:0041577"}


id: PBO:0049400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 1A","termid":"PBO:0049400"}


id: GO:1900196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of penicillin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of penicillin metabolic process","termid":"GO:0033244"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"penicillin biosynthetic process","termid":"GO:0042318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790","GO:0019748"],"is_obsolete":false,"name":"regulation of penicillin biosynthetic process","synonyms":[{"name":"regulation of penicillin anabolism","type":"exact"},{"name":"regulation of penicillin biosynthesis","type":"exact"},{"name":"regulation of penicillin formation","type":"exact"},{"name":"regulation of penicillin synthesis","type":"exact"}],"termid":"GO:1900196"}


id: FYPO:0002616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to pre-autophagosomal structure","synonyms":[{"name":"increased protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"increased protein localization to PAS","type":"exact"},{"name":"increased protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"increased protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002616"}


id: PBO:0041631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 1","termid":"PBO:0041631"}


id: FYPO:0001419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grows at the same rate as wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"normal cell population growth rate","synonyms":[{"name":"normal cell population proliferation","type":"related"},{"name":"normal cell proliferation","type":"related"},{"name":"normal growth rate","type":"broad"}],"termid":"FYPO:0001419"}


id: GO:0008775
data:
  {"annotated_genes":["SJAG_02985","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75488,87465],"is_not":false,"summary":null,"term":"GO:0008775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + acetate = a fatty acid anion + acetyl-CoA.","definition_xrefs":["EC:2.8.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"acetate CoA-transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:13381","Reactome:R-HSA-2066788","MetaCyc:ACECOATRANS-RXN","UM-BBD_enzymeID:r0012"],"synonyms":[{"name":"acetate coenzyme A-transferase activity","type":"related"},{"name":"acetyl-CoA:acetoacetate CoA transferase activity","type":"related"},{"name":"acyl-CoA:acetate CoA-transferase activity","type":"related"},{"name":"butyryl CoA:acetate CoA transferase activity","type":"related"},{"name":"butyryl coenzyme A transferase activity","type":"related"},{"name":"succinyl-CoA:acetate CoA transferase activity","type":"related"}],"termid":"GO:0008775","terms_by_termid":{"GO:0008775":null}}


id: GO:0046321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid oxidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"regulation of fatty acid oxidation","termid":"GO:0046320"},{"relation_name":"positively_regulates","term_name":"fatty acid oxidation","termid":"GO:0019395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of fatty acid oxidation","synonyms":[{"name":"activation of fatty acid oxidation","type":"narrow"},{"name":"stimulation of fatty acid oxidation","type":"narrow"},{"name":"up regulation of fatty acid oxidation","type":"exact"},{"name":"up-regulation of fatty acid oxidation","type":"exact"},{"name":"upregulation of fatty acid oxidation","type":"exact"}],"termid":"GO:0046321"}


id: GO:0008172
data:
  {"annotated_genes":["SJAG_02290","SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003871"},{"annotations":[94608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008898"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the sulfur atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02290":null,"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-209821"],"termid":"GO:0008172","terms_by_termid":{"GO:0003871":null,"GO:0008898":null}}


id: GO:1990273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which a 2,2,7-trimethylguanosine cap structure is added to the 5' end of an snRNA. The snRNA capping process includes the formation of 7-methyl-G caps found on all RNA polymerase II transcripts, followed by hypermethylation at the 2' position of the guanosine residue to convert a mono-methylated cap to a 2,2,7-trimethylguanosine cap structure. Note that the pol III transcribed U6 snRNA is also TMG capped.","definition_xrefs":["PMID:15590684","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA processing","termid":"GO:0016180"},{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016073"],"is_obsolete":false,"name":"snRNA 2,2,7-trimethylguanosine (TMG) capping","synonyms":[{"name":"snRNA 2,2,7-trimethylguanosine (TMG) cap formation","type":"exact"},{"name":"snRNA 5'-end processing","type":"broad"},{"name":"snRNA capping","type":"exact"}],"termid":"GO:1990273"}


id: PR:O59827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A disulfide-bond oxidoreductase YfcG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.07c","secondary_identifiers":["UniProtKB:O59827"],"synonyms":[{"name":"GST-II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-yfcG","type":"exact"}],"termid":"PR:O59827"}


id: PBO:0029482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell_population_(obsolete_FYPO:0002233)","termid":"PBO:0029482"}


id: PBO:0063407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 3","termid":"PBO:0063407"}


id: GO:2000750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment or maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"},{"relation_name":"is_a","term_name":"negative regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000770"},{"relation_name":"negatively_regulates","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000750"}


id: PBO:0046425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A10","termid":"PBO:0046425"}


id: PR:P13681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dis2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P13681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase PP1-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.02c","synonyms":[{"name":"Spom972h-dis2","type":"exact"}],"termid":"PR:P13681"}


id: GO:0106190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to a decarboxylation reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to a decarboxylation reaction (obsolete GO:0106190)","secondary_identifiers":["EC:7.1.4.-"],"termid":"GO:0106190"}


id: PBO:0045019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent protein kinase domain 2A","termid":"PBO:0045019"}


id: GO:0150043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the extracellular matrix of the perisynaptic space (the extracellular space adjacent to the synapse) and the synaptic cleft.","definition_xrefs":["PMID:17189701","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of synapse-associated extracellular matrix","synonyms":[{"name":"extra-synaptic extracellular matrix structural constituent","type":"exact"},{"name":"structural constituent of extra-synaptic extracellular matrix","type":"exact"},{"name":"synapse-associated extracellular matrix structural constituent","type":"exact"}],"termid":"GO:0150043"}


id: PBO:0090383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase P5 type","termid":"PBO:0090383"}


id: PBO:0084869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S19 ribosomal protein","termid":"PBO:0084869"}


id: PBO:0091246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH dehydrogenase, (Old yellow enzyme) involved in small alpha,beta-unsaturated carbonyl compounds","termid":"PBO:0091246"}


id: PBO:0073487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGO1 antisense RNA 1","termid":"PBO:0073487"}


id: PBO:0030023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_asymmetric_protein_localization_to_old_or_new_mitotic_spindle_pole_body","termid":"PBO:0030023"}


id: PBO:0004724
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.9","termid":"PBO:0004724"}


id: PBO:0065199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF19 divergent transcript","termid":"PBO:0065199"}


id: GO:0030312
data:
  {"annotated_genes":["SJAG_04236","SJAG_00340","SJAG_00620","SJAG_01028","SJAG_01835","SJAG_01290","SJAG_02135","SJAG_01086","SJAG_05285","SJAG_02093","SJAG_04184","SJAG_01970","SJAG_03013","SJAG_00218","SJAG_00876","SJAG_02478","SJAG_03204","SJAG_06622","SJAG_04327","SJAG_00027","SJAG_02131","SJAG_00784","SJAG_00239","SJAG_02916","SJAG_04720","SJAG_03295","SJAG_01755","SJAG_02649","SJAG_00096","SJAG_04238","SJAG_01321","SJAG_03903","SJAG_01017","SJAG_03483","SJAG_02222","SJAG_04073","SJAG_04864","SJAG_04771","SJAG_02192","SJAG_01975","SJAG_04723","SJAG_04067","SJAG_03828","SJAG_03057","SJAG_02945","SJAG_03824","SJAG_01288","SJAG_06621"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105213,110536,113979,86275,110246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005619"},{"annotations":[103911],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043188"},{"annotations":[87789],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[112133,84725,88518,112132,88517,96896,96895],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010339"},{"annotations":[98826,97157,102981,97735,99083,99084,112746,97734],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070263"},{"annotations":[113969,84726,84101,87904,100291,83484,91149,105051,105055,109328,109500,110640,96903,111796,114518,104531,97601,110921,109501,90061,111773,85178,106593,102812,106592,102220,85955,86149,98556,105052,87615,105054,87605,105056,105053,105057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009277"},{"annotations":[83553],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"},{"annotations":[83658,83659,111994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031160"}]},"cv_name":"cellular_component","definition":"A structure that lies outside the plasma membrane and surrounds the entire cell or cells. This does not include the periplasmic space.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell periphery","termid":"GO:0071944"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00096":null,"SJAG_00218":null,"SJAG_00239":null,"SJAG_00340":null,"SJAG_00620":null,"SJAG_00784":null,"SJAG_00876":null,"SJAG_01017":null,"SJAG_01028":null,"SJAG_01086":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01755":null,"SJAG_01835":null,"SJAG_01970":null,"SJAG_01975":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02135":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_02916":null,"SJAG_02945":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03204":null,"SJAG_03295":null,"SJAG_03483":null,"SJAG_03824":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04067":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04327":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_05285":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"external encapsulating structure","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030312","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null,"GO:0009277":null,"GO:0010339":null,"GO:0031160":null,"GO:0043188":null,"GO:0070263":null}}


id: FYPO:0006581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to fenpropimorph. Cells stop growing (and may die) at a concentration of fenpropimorph that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to fenpropimorph","synonyms":[{"name":"hypersensitive to fenpropimorph","type":"exact"},{"name":"sensitive to fenpropimorph during mitotic cell cycle","type":"related"},{"name":"sensitive to fenpropimorph during vegetative growth","type":"exact"}],"termid":"FYPO:0006581"}


id: PBO:0074631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 25B","termid":"PBO:0074631"}


id: GO:0030698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a methyl group from 5,10-methylenetetrahydrofolate to the C5 atom of the uridine residue at position 54 in a tRNA molecule. This occurs in most Gram-positive bacteria and some Gram-negative bacteria.","definition_xrefs":["GOC:hjd","ISBN:1555811337"],"gene_count":0,"genotype_count":0,"name":"obsolete 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity (obsolete GO:0030698)","synonyms":[{"name":"RUMT","type":"broad"}],"termid":"GO:0030698"}


id: GO:0090500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"}


id: PBO:0060935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 4","termid":"PBO:0060935"}


id: PBO:0091356
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Target Of Sbf, after S. cerevisiae","termid":"PBO:0091356"}


id: PBO:0074578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smad nuclear interacting protein 1","termid":"PBO:0074578"}


id: PBO:0085668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleotide excision repair (NER); homologous to RAD4","termid":"PBO:0085668"}


id: MOD:00398
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a carbamoyl (carboxamido) group. Replacement of an amino hydrogen produces a ureido group.","definition_xrefs":["DeltaMass:56","Unimod:5","PubMed:12203680","PubMed:10978403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoylated residue","synonyms":[{"name":"Carbamyl","type":"related"},{"name":"Carbamylation","type":"exact"}],"termid":"MOD:00398"}


id: GO:0007638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior that is dependent upon the sensation of a mechanical stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanosensory behavior","synonyms":[{"name":"behavioral response to mechanical stimulus","type":"exact"},{"name":"behavioural response to mechanical stimulus","type":"exact"},{"name":"mechanosensory behaviour","type":"exact"}],"termid":"GO:0007638"}


id: PBO:0004150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair nuclease Rad13","termid":"PBO:0004150"}


id: PBO:0038391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_transcript","termid":"PBO:0038391"}


id: PBO:0040614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAI1 associated protein 3","termid":"PBO:0040614"}


id: PBO:0059580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated 1 family member 2","termid":"PBO:0059580"}


id: PBO:0066336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 like","termid":"PBO:0066336"}


id: PBO:0060731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 2","termid":"PBO:0060731"}


id: PBO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 31","termid":"PBO:0047391"}


id: PBO:0075995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP2 antisense RNA 1","termid":"PBO:0075995"}


id: FYPO:0002621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of malate dehydrogenase (decarboxylating) (NAD+) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"abnormal 'malic' enzyme activity","type":"related"},{"name":"abnormal (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"abnormal NAD-linked malic enzyme activity","type":"related"},{"name":"abnormal NAD-malic enzyme activity","type":"broad"},{"name":"abnormal NAD-specific malic enzyme activity","type":"related"},{"name":"abnormal malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"FYPO:0002621"}


id: GO:0009677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Rudimentary double fertilization where one of the two sperm nuclei from the pollen tube fuses with the egg nucleus to form a 2n zygote, and the other fuses with the ventral canal cell nucleus to form a second zygote, which soon degenerates. An example of this process is found in the Gnetophytes, such as Welwitschia mirabilis.","definition_xrefs":["GOC:mtg_sensu","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"double fertilization forming two zygotes","termid":"GO:0009677"}


id: GO:0016815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a nitrile, a compound containing the cyano radical, -CN.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles","secondary_identifiers":["EC:3.5.5.-"],"termid":"GO:0016815"}


id: FYPO:0005260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal at a low temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth at low temperature","synonyms":[{"name":"cold resistance","type":"related"},{"name":"cold resistant","type":"related"},{"name":"increased growth at low temperature","type":"broad"},{"name":"increased vegetative cell population growth at low temperature","type":"exact"},{"name":"resistance to cold","type":"related"},{"name":"resistance to cold during mitotic cell cycle","type":"related"},{"name":"resistance to cold during vegetative growth","type":"related"},{"name":"resistant to cold during vegetative growth","type":"related"}],"termid":"FYPO:0005260"}


id: PBO:0088973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucan synthase catalytic subunit Bgs3","termid":"PBO:0088973"}


id: PBO:0027129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_carbohydrate_metabolism_gene_mRNA_during_meiotic_cell_cycle","termid":"PBO:0027129"}


id: GO:0048211
data:
  {"annotated_genes":["SJAG_01633"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91609],"is_not":false,"summary":null,"term":"GO:0048211"}]},"cv_name":"biological_process","definition":"The initial attachment of a Golgi transport vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the Golgi vesicle and the target membrane.","definition_xrefs":["GOC:jid","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking","termid":"GO:0048278"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150","GO:0140056"],"is_obsolete":false,"name":"Golgi vesicle docking","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi vesicle docking with target membrane","type":"exact"},{"name":"Golgi vesicle to membrane docking","type":"exact"},{"name":"Golgi-derived vesicle docking","type":"exact"},{"name":"dictyosome vesicle docking to target membrane","type":"narrow"}],"termid":"GO:0048211","terms_by_termid":{"GO:0048211":null}}


id: PBO:0067575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 732, pseudogene","termid":"PBO:0067575"}


id: PBO:0047206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 219 member B","termid":"PBO:0047206"}


id: PBO:0038752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2","termid":"PBO:0038752"}


id: PBO:0083776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nuclear protein; required for biogenesis of the small ribosomal subunit; has a possible role in the osmoregulatory glycerol response; putative homolog of human NOM1 which is implicated in acute myeloid leukemia","termid":"PBO:0083776"}


id: GO:0060682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the primary ureteric bud grows along its axis dorsally toward the metanephric blastema.","definition_xrefs":["GOC:dph","PMID:16916378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"ureteric bud elongation","termid":"GO:0060677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ureteric bud growth","termid":"GO:0060682"}


id: PBO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF hand","termid":"PBO:0000276"}


id: PATO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches freely branching toward the margin.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cladodromous","termid":"PATO:0001971"}


id: PBO:0031063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_elongated_germ_tube","termid":"PBO:0031063"}


id: FYPO:0005567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T, when the cell undergoes transition from G0 phase to G1. Cell length is normal.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped cell during recovery from quiescence","termid":"FYPO:0005810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0005568","FYPO:0005447"],"is_obsolete":false,"name":"T-shaped cell during G0 to G1 transition","synonyms":[{"name":"T-shaped cell during cell cycle re-entry at G1","type":"exact"},{"name":"T-shaped cell during cell quiescence to G1 transition","type":"exact"},{"name":"T-shaped cell during exit from cell quiescence into G1","type":"exact"},{"name":"T-shaped cell during quiescence to G1 transition","type":"exact"},{"name":"T-shaped cell during recovery from quiescence following G1 arrest","type":"exact"},{"name":"T-shaped cell during recovery from quiescence into G1","type":"exact"},{"name":"cell morphology, T shaped during G0 to G1 transition","type":"exact"}],"termid":"FYPO:0005567"}


id: PR:Q9P6I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02355","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.10c","secondary_identifiers":["UniProtKB:Q9P6I0"],"synonyms":[{"name":"AsnRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NARS2","type":"exact"},{"name":"asparaginyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I0"}


id: PBO:0028974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_hypochlorite","termid":"PBO:0028974"}


id: FYPO:0004087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which astral microtubules are present in a greater than normal proportion of the cells that have mitotic spindles.","definition_xrefs":["PMID:11694582","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased number of cells with astral spindle microtubules","synonyms":[{"name":"increased fraction of cells with spindles with astral microtubules","type":"exact"},{"name":"increased fraction of spindles with astral microtubules","type":"exact"},{"name":"increased number of cells with spindles with astral microtubules","type":"exact"},{"name":"increased number of spindles with astral microtubules","type":"exact"}],"termid":"FYPO:0004087"}


id: GO:1903543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exosomal secretion.","definition_xrefs":["PMID:24105262","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of exocytosis","termid":"GO:0045921"},{"relation_name":"is_a","term_name":"regulation of exosomal secretion","termid":"GO:1903541"},{"relation_name":"positively_regulates","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0044085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of exosomal secretion","synonyms":[{"name":"activation of exosomal protein secretion","type":"narrow"},{"name":"activation of exosomal secretion","type":"narrow"},{"name":"activation of exosomal secretory pathway","type":"narrow"},{"name":"activation of extracellular vesicular exosome secretion","type":"narrow"},{"name":"activation of secretion of exosome","type":"narrow"},{"name":"positive regulation of exosomal protein secretion","type":"narrow"},{"name":"positive regulation of exosomal secretory pathway","type":"exact"},{"name":"positive regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"positive regulation of secretion of exosome","type":"exact"},{"name":"up regulation of exosomal protein secretion","type":"narrow"},{"name":"up regulation of exosomal secretion","type":"exact"},{"name":"up regulation of exosomal secretory pathway","type":"exact"},{"name":"up regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"up regulation of secretion of exosome","type":"exact"},{"name":"up-regulation of exosomal protein secretion","type":"narrow"},{"name":"up-regulation of exosomal secretion","type":"exact"},{"name":"up-regulation of exosomal secretory pathway","type":"exact"},{"name":"up-regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"up-regulation of secretion of exosome","type":"exact"},{"name":"upregulation of exosomal protein secretion","type":"narrow"},{"name":"upregulation of exosomal secretion","type":"exact"},{"name":"upregulation of exosomal secretory pathway","type":"exact"},{"name":"upregulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"upregulation of secretion of exosome","type":"exact"}],"termid":"GO:1903543"}


id: PR:O94479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.12c gene.","definition_xrefs":["UniProtKB:O94479","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.12c","synonyms":[{"name":"FXNA-related family protease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1919.12c","type":"exact"}],"termid":"PR:O94479"}


id: PBO:0039372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMMECR1 like pseudogene 1","termid":"PBO:0039372"}


id: GO:0015252
data:
  {"annotated_genes":["SJAG_02105","SJAG_00985","SJAG_00133","SJAG_07003","SJAG_00836","SJAG_MIT09","SJAG_05204","SJAG_04122","SJAG_02564","SJAG_MIT15","SJAG_00438","SJAG_03925","SJAG_MIT37","SJAG_00915","SJAG_03114","SJAG_02598","SJAG_00542"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104040,115264,89316,88888,104928,112023,101127,99774,90889,99804,99151,115252,88887,89913,103950,85166,97912,115258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"}]},"cv_name":"molecular_function","definition":"Enables the facilitated diffusion of a hydrogen ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:pr","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"proton channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9729542","RHEA:34979"],"synonyms":[{"name":"hydrogen ion channel activity","type":"exact"}],"termid":"GO:0015252","terms_by_termid":{"GO:0046933":null}}


id: GO:0033577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in the endoplasmic reticulum.","definition_xrefs":["GOC:mah","GOC:pr","PMID:12042244"],"gene_count":0,"genotype_count":0,"name":"obsolete protein glycosylation in endoplasmic reticulum (obsolete GO:0033577)","synonyms":[{"name":"core glycosylation","type":"related"},{"name":"protein amino acid glycosylation in ER","type":"exact"},{"name":"protein amino acid glycosylation in endoplasmic reticulum","type":"exact"}],"termid":"GO:0033577"}


id: GO:0044847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a symbiont acquires iron from its host, either from heme or other iron containing molecules such as transferrin and lactoferrin. Begins with either the secretion of symbiont gene products that bind iron- or heme-containing molecules (siderophores and hemophores) from the symbiont cell into the host, or by expression of receptors that bind iron- or heme-containing molecules on the symbiont cell surface. Ends when the iron-containing compound is transported into the symbiont cell.","definition_xrefs":["PMID:22865843","PMID:15487950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquisition of nutrients from host","termid":"GO:0044002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iron acquisition from host","secondary_identifiers":["GO:0052099"],"synonyms":[{"name":"acquisition by organism of nutrients from host via siderophores","type":"related"},{"name":"acquisition by symbiont of nutrients from host via siderophores","type":"narrow"},{"name":"heme acquisition","type":"related"},{"name":"iron acquisition","type":"broad"},{"name":"iron acquisition by symbiont from host","type":"exact"},{"name":"iron acquisition by symbiont from host heme","type":"narrow"}],"termid":"GO:0044847"}


id: PBO:0043897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1 pseudogene 4","termid":"PBO:0043897"}


id: PBO:0065418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 5","termid":"PBO:0065418"}


id: PBO:0054199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1579","termid":"PBO:0054199"}


id: PBO:0048170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2E3 pseudogene 1","termid":"PBO:0048170"}


id: PBO:0066063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor like 1","termid":"PBO:0066063"}


id: PBO:0012237
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterododecameric","termid":"PBO:0012237"}


id: GO:1902471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring localization.","definition_xrefs":["PMID:22786806","PMID:19959363","PMID:21246752","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring localization (obsolete GO:1902471)","termid":"GO:1902471"}


id: PBO:0075676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spexin hormone","termid":"PBO:0075676"}


id: PR:P0CT42
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-7 gene.","definition_xrefs":["UniProtKB:P0CT42","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-7 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D1.01c","synonyms":[{"name":"Spom972h-Tf2-7","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT42"}


id: PBO:0046483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 6 like 2","termid":"PBO:0046483"}


id: GO:1903509
data:
  {"annotated_genes":["SJAG_00295","SJAG_04975","SJAG_04881","SJAG_05327","SJAG_02776","SJAG_03066","SJAG_06383","SJAG_02913","SJAG_02804","SJAG_05311","SJAG_05278","SJAG_01860","SJAG_01227","SJAG_03506","SJAG_04165","SJAG_03115","SJAG_03878","SJAG_02168","SJAG_01570","SJAG_05219","SJAG_03801","SJAG_02488","SJAG_00506","SJAG_04119","SJAG_04337","SJAG_00068","SJAG_04924","SJAG_03292","SJAG_04913","SJAG_01416","SJAG_06425","SJAG_00831","SJAG_02903","SJAG_03672","SJAG_00846","SJAG_04878","SJAG_03953","SJAG_02523"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84687,89024,110110,88250,84959,87421,89113,83476,97695,112314,108516,103684,110954,89570,94744,85583,113421,90559,87248,94952,102843,96315,96381,107756,99155,99832,104722,92489,111384,94180,106070,99895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[93576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"},{"annotations":[87829,91303,91790,86768,108695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[87830,108696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006675"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving liposaccharide.","definition_xrefs":["GOC:dph","PMID:9452964","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02168":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"liposaccharide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"liposaccharide metabolism","type":"exact"}],"termid":"GO:1903509","terms_by_termid":{"GO:0006506":null,"GO:0006675":null,"GO:0006676":null,"GO:0051999":null}}


id: PBO:0112922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation wall assembly GPI anchored protein, Meu10","termid":"PBO:0112922"}


id: GO:0007289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specialization of the spermatid nucleus during the development of a spermatid into a mature male gamete competent for fertilization.","definition_xrefs":["GOC:jl","GOC:bf","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid nucleus differentiation","synonyms":[{"name":"spermatid nuclear differentiation","type":"exact"}],"termid":"GO:0007289"}


id: PR:O74442
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.12c","synonyms":[{"name":"Spom972h-ubp16","type":"exact"},{"name":"deubiquitinating enzyme 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74442"}


id: GO:0043053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry into the facultative diapause of the dauer (enduring) larval stage of nematode development.","definition_xrefs":["GOC:kmv","GOC:cab1","PMID:10077613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entry into diapause","termid":"GO:0055115"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dauer entry","synonyms":[{"name":"nematode entry into dormancy","type":"exact"}],"termid":"GO:0043053"}


id: PBO:0068796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 33, pseudogene","termid":"PBO:0068796"}


id: PBO:0004598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MYND type","termid":"PBO:0004598"}


id: FYPO:0005273
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115306,115704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[115473,115471,115472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a cell cycle phase transition normally.","definition_xrefs":["GO:0044770","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle phase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01956","SJAG_01330","SJAG_03575"],"single_locus_genotype_uniquenames":["mad2delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0005273","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: PBO:0075567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor","termid":"PBO:0075567"}


id: PBO:0049699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUWE1 associated protein modifying stress responses","termid":"PBO:0049699"}


id: PBO:0036555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Adn3","termid":"PBO:0036555"}


id: PBO:0063684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 8","termid":"PBO:0063684"}


id: PBO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress activated MAP kinase interacting protein Sin1","termid":"PBO:0002666"}


id: PBO:0003130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug184","termid":"PBO:0003130"}


id: PBO:0034116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-molecularly_decreases_activity_of","termid":"PBO:0034116"}


id: PBO:0003452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropteroatesynthase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase (predicted)","termid":"PBO:0003452"}


id: PBO:0078544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 36","termid":"PBO:0078544"}


id: GO:0051745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the conversion of (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H+ + 2 reduced [2Fe-2S]-[ferredoxin] to isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) releasing H2O + 2 oxidized [2Fe-2S]-[ferredoxin]. Note that (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate is an alternative name for 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.","definition_xrefs":["EC:1.17.7.4","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity","secondary_identifiers":["KEGG_REACTION:R05884","MetaCyc:ISPH2-RXN"],"synonyms":[{"name":"4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity","type":"exact"},{"name":"isopentenyl-diphosphate:NAD(P)+ oxidoreductase activity","type":"exact"}],"termid":"GO:0051745"}


id: PBO:0026923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation_at_RxxS_site_during_nitrogen_starvation","termid":"PBO:0026923"}


id: PBO:0034213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_mimicry_relationship_with","termid":"PBO:0034213"}


id: PBO:0058055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4276","termid":"PBO:0058055"}


id: PBO:0088632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc4","termid":"PBO:0088632"}


id: PBO:0048348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 59","termid":"PBO:0048348"}


id: GO:0042209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen and synthesized by some higher plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orcinol metabolic process","termid":"GO:0018940"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"orcinol catabolic process","secondary_identifiers":["UM-BBD_pathwayID:orc"],"synonyms":[{"name":"orcin catabolic process","type":"exact"},{"name":"orcin catabolism","type":"exact"},{"name":"orcinol breakdown","type":"exact"},{"name":"orcinol catabolism","type":"exact"},{"name":"orcinol degradation","type":"exact"}],"termid":"GO:0042209"}


id: GO:0048841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axon extension involved in axon guidance.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"regulates","term_name":"axon extension involved in axon guidance","termid":"GO:0048846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon extension involved in axon guidance","termid":"GO:0048841"}


id: FYPO:0005933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G1 phase of the mitotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during mitotic G1 phase","synonyms":[{"name":"decreased protein accumulation during mitotic G1 phase","type":"related"},{"name":"decreased protein level during G1 phase of mitotic cell cycle","type":"exact"},{"name":"decreased protein level during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"reduced protein level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005933"}


id: PBO:0074481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD specific E3 ubiquitin protein ligase 2 pseudogene 1","termid":"PBO:0074481"}


id: PBO:0110503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable C (pseudogene)","termid":"PBO:0110503"}


id: GO:0046275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavonoids, a group of phenolic derivatives containing a flavan skeleton.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonoid catabolic process","synonyms":[{"name":"flavonoid breakdown","type":"exact"},{"name":"flavonoid catabolism","type":"exact"},{"name":"flavonoid degradation","type":"exact"}],"termid":"GO:0046275"}


id: GO:2000538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of B cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte chemotaxis","termid":"GO:0140131"},{"relation_name":"is_a","term_name":"regulation of B cell chemotaxis","termid":"GO:2000537"},{"relation_name":"positively_regulates","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell chemotaxis","termid":"GO:2000538"}


id: GO:0098828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inhibitory postsynaptic potential (IPSP). IPSP is a temporary decrease in postsynaptic membrane potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"regulates","term_name":"inhibitory postsynaptic potential","termid":"GO:0060080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"modulation of inhibitory postsynaptic potential","synonyms":[{"name":"regulation of inhibitory postsynaptic potential","type":"exact"}],"termid":"GO:0098828"}


id: GO:0031925
data:
  {"annotated_genes":["SJAG_03652","SJAG_02152","SJAG_02962","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86176,86177,113659,114936],"is_not":false,"summary":null,"term":"GO:0031925"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyridoxal from one side of a membrane to the other. Pyridoxal, 3-hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxaldehyde, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"pyridoxal transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal transporter activity","type":"broad"}],"termid":"GO:0031925","terms_by_termid":{"GO:0031925":null}}


id: PBO:0085532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S30, no bacterial homolog; RPS30A has a paralog, RPS30B, that arose from the whole genome duplication","termid":"PBO:0085532"}


id: GO:0055064
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101822],"is_not":false,"summary":null,"term":"GO:0055064"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of chloride ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion homeostasis","termid":"GO:0055081"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"chloride ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055064","terms_by_termid":{"GO:0055064":null}}


id: GO:0045089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of innate immune response","synonyms":[{"name":"stimulation of innate immune response","type":"narrow"},{"name":"up regulation of innate immune response","type":"exact"},{"name":"up-regulation of innate immune response","type":"exact"},{"name":"upregulation of innate immune response","type":"exact"}],"termid":"GO:0045089"}


id: PBO:0084737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; forms a complex with Tim8p that delivers a subset of hydrophobic proteins to the TIM22 complex for insertion into the inner membrane","termid":"PBO:0084737"}


id: PBO:0060671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nedd4 family interacting protein 1","termid":"PBO:0060671"}


id: PBO:0091295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase","termid":"PBO:0091295"}


id: PBO:0059022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 11","termid":"PBO:0059022"}


id: GO:2000974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphoid progenitor cell differentiation","termid":"GO:1905457"},{"relation_name":"is_a","term_name":"regulation of pro-B cell differentiation","termid":"GO:2000973"},{"relation_name":"negatively_regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pro-B cell differentiation","synonyms":[{"name":"negative regulation of pro-B cell development","type":"related"},{"name":"negative regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000974"}


id: GO:0061054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"somite development","termid":"GO:0061053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermatome development","termid":"GO:0061054"}


id: SO:0002153
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that falls upstream of a transcript, but within the genic region of the gene due to alternately transcribed isoforms.","definition_xrefs":["SO:ke","NCBI:dm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genic_upstream_transcript_variant","synonyms":[{"name":"genic 5 prime transcript variant","type":"exact"},{"name":"genic 5' transcript variant","type":"exact"},{"name":"genic upstream transcript variant","type":"exact"}],"termid":"SO:0002153"}


id: PBO:0058611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6743","termid":"PBO:0058611"}


id: GO:0051222
data:
  {"annotated_genes":["SJAG_04464","SJAG_01245","SJAG_00906","SJAG_01805","SJAG_04312","SJAG_03048","SJAG_03453","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[97944,107161,89849,96530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[86878,90417,98487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"positively_regulates","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein transport","type":"narrow"},{"name":"stimulation of protein transport","type":"narrow"},{"name":"up regulation of protein transport","type":"exact"},{"name":"up-regulation of protein transport","type":"exact"},{"name":"upregulation of protein transport","type":"exact"}],"termid":"GO:0051222","terms_by_termid":{"GO:0042307":null,"GO:0046827":null,"GO:0070863":null}}


id: PBO:0086459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metalloendopeptidase; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0086459"}


id: PBO:0088972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30","termid":"PBO:0088972"}


id: GO:0020005
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a symbiont-containing vacuole, derived from both the host and symbiont.","definition_xrefs":["GOC:jl","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"symbiont-containing vacuole","termid":"GO:0020003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"symbiont-containing vacuole membrane","synonyms":[{"name":"parasitophorous vacuolar membrane","type":"exact"}],"termid":"GO:0020005"}


id: GO:0140980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nucleosides within a cell.","definition_xrefs":["PMID:34880500","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nucleoside homeostasis","termid":"GO:0140980"}


id: PBO:0082253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of translation initiation factor eIF2B; guanine-nucleotide exchange factor for eIF2; activity regulated by phosphorylated eIF2; positive regulator of GCN4 expression; mutations in human ortholog EIF2B2 cause fatal brain disease childhood ataxia with central nervous system hypomyelination (CACH); human ortholog EIF2B1 can complement yeast null mutant","termid":"PBO:0082253"}


id: PBO:0039690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC down-regulated 1 like","termid":"PBO:0039690"}


id: RO:0003304
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some contributing role that influences the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_condition","termid":"RO:0003304"}


id: GO:0033854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-arogenate = L-glutamate + prephenate.","definition_xrefs":["RHEA:22880","EC:2.6.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"glutamate-prephenate aminotransferase activity","secondary_identifiers":["MetaCyc:PREPHENATE-TRANSAMINE-RXN","KEGG_REACTION:R07276"],"synonyms":[{"name":"L-arogenate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"L-glutamate:prephenate aminotransferase activity","type":"related"},{"name":"PAT","type":"related"},{"name":"prephenate transaminase activity","type":"broad"}],"termid":"GO:0033854"}


id: GO:0060121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of vestibular hair cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"},{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"},{"relation_name":"part_of","term_name":"vestibular receptor cell morphogenesis","termid":"GO:0060116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell stereocilium organization","synonyms":[{"name":"vestibular hair cell stereocilium organization","type":"exact"},{"name":"vestibular receptor cell stereocilium organisation","type":"exact"},{"name":"vestibular receptor cell stereocilium organization and biogenesis","type":"related"}],"termid":"GO:0060121"}


id: PBO:0038631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminocarboxymuconate semialdehyde decarboxylase","termid":"PBO:0038631"}


id: PBO:0053922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1219","termid":"PBO:0053922"}


id: PBO:0072535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 65","termid":"PBO:0072535"}


id: PBO:0015249
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDRC and RITS complexes associate together, and with non-coding centromeric RNA in a Dcr1 (hence siRNA) and Clr4 dependent manner","termid":"PBO:0015249"}


id: FYPO:0003802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in telomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at telomere during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation at telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003802"}


id: PBO:0060118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 19","termid":"PBO:0060118"}


id: PBO:0031212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multiseptate_vegetative_cell","termid":"PBO:0031212"}


id: GO:0014003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system.","definition_xrefs":["GOC:dgh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte development","synonyms":[{"name":"oligodendrocyte cell development","type":"exact"}],"termid":"GO:0014003"}


id: PBO:0028947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutamate-cysteine_ligase_activity","termid":"PBO:0028947"}


id: PBO:0059909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 32","termid":"PBO:0059909"}


id: PBO:0080969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8A","termid":"PBO:0080969"}


id: GO:0048240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium.","definition_xrefs":["GOC:jid","ISBN:978-3-642-58301-8","PMID:11820818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm capacitation","synonyms":[{"name":"sperm activation","type":"related"}],"termid":"GO:0048240"}


id: PBO:0057964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3685","termid":"PBO:0057964"}


id: GO:0042728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavin-containing compound catabolic process","synonyms":[{"name":"flavin-containing compound catabolic process breakdown","type":"exact"},{"name":"flavin-containing compound catabolic process degradation","type":"exact"},{"name":"flavin-containing compound catabolism","type":"exact"},{"name":"riboflavin and derivative catabolic process","type":"related"},{"name":"riboflavin and derivative catabolism","type":"related"},{"name":"vitamin B2 and derivative catabolic process","type":"related"},{"name":"vitamin B2 and derivative catabolism","type":"related"}],"termid":"GO:0042728"}


id: GO:0047405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a pyrimidine 5'-nucleotide = ribose-5-phosphate + a pyrimidine.","definition_xrefs":["MetaCyc:3.2.2.10-RXN","EC:3.2.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"pyrimidine-5'-nucleotide nucleosidase activity","secondary_identifiers":["RHEA:13425"],"synonyms":[{"name":"Pyr5N activity","type":"related"},{"name":"pyrimidine nucleotide N-ribosidase activity","type":"related"},{"name":"pyrimidine-5'-nucleotide phosphoribo(deoxyribo)hydrolase activity","type":"related"}],"termid":"GO:0047405"}


id: PBO:0079794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A2","termid":"PBO:0079794"}


id: MOD:00709
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a sulfur atom of L-methionine residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur oxygenated L-methionine","synonyms":[{"name":"SOxyMet","type":"exact"}],"termid":"MOD:00709"}


id: PBO:0050826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxypyruvate isomerase (putative)","termid":"PBO:0050826"}


id: SO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant that is located within the UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_variant","termid":"SO:0001791"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_variant","synonyms":[{"name":"UTR variant","type":"exact"},{"name":"UTR_","type":"exact"}],"termid":"SO:0001622"}


id: GO:0071640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of macrophage inflammatory protein 1 alpha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"macrophage inflammatory protein-1 alpha production","termid":"GO:0071608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of macrophage inflammatory protein 1 alpha production","synonyms":[{"name":"regulation of CCL3 production","type":"exact"},{"name":"regulation of MIP-1a production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071640"}


id: PBO:0073324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress associated endoplasmic reticulum protein family member 2","termid":"PBO:0073324"}


id: PBO:0056659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 26","termid":"PBO:0056659"}


id: FYPO:0005522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed in the forward direction from the centromere outer repeat region are present at greater levels than normal.","definition_xrefs":["PomBase:mah","PMID:22990236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric outer repeat transcript level","termid":"FYPO:0000220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased forward centromeric outer repeat transcript level","synonyms":[{"name":"increased accumulation of forward centromeric outer repeat transcripts","type":"related"},{"name":"increased accumulation of forward centromeric outer repeat transcripts during vegetative growth","type":"related"},{"name":"increased accumulation of forward non-coding outer repeat transcripts","type":"exact"},{"name":"increased forward centromere outer repeat transcript level","type":"exact"},{"name":"increased forward centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"increased forward centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"increased forward centromeric outer repeat-derived transcript level","type":"exact"},{"name":"increased level of forward centromeric outer repeat transcripts","type":"exact"}],"termid":"FYPO:0005522"}


id: PBO:0091708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate snoRNA","termid":"PBO:0091708"}


id: GO:0007166
data:
  {"annotated_genes":["SJAG_02823","SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101656,104584],"is_not":false,"summary":null,"term":"GO:0007166"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor located on the cell surface. The pathway ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02258":null,"SJAG_02823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell surface receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell surface receptor linked signal transduction","type":"exact"},{"name":"cell surface receptor linked signaling pathway","type":"exact"},{"name":"cell surface receptor linked signalling pathway","type":"exact"}],"termid":"GO:0007166","terms_by_termid":{"GO:0007166":null}}


id: GO:0035689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by chemokine CCL5 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:18337562","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 5 signaling pathway","synonyms":[{"name":"CCL5-mediated signaling pathway","type":"exact"},{"name":"RANTES-mediated signaling pathway","type":"exact"},{"name":"chemokine (C-C motif) ligand 5 signalling pathway","type":"exact"}],"termid":"GO:0035689"}


id: PBO:0043215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 2","termid":"PBO:0043215"}


id: PBO:0049505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 12","termid":"PBO:0049505"}


id: GO:0071020
data:
  {"annotated_genes":["SJAG_02455","SJAG_01214"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105001],"is_not":false,"summary":null,"term":"GO:0071020"},{"annotations":[110525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071021"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed following the second splicing event and contains the spliced product, the excised intron, and three snRNPs, including U5.","definition_xrefs":["GOC:krc","GOC:mah","ISBN:0879697393","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01214":null,"SJAG_02455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"post-spliceosomal complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mammalian spliceosomal complex C2","type":"narrow"},{"name":"yeast spliceosomal complex A2-3","type":"narrow"}],"termid":"GO:0071020","terms_by_termid":{"GO:0071020":null,"GO:0071021":null}}


id: PBO:0054597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2000","termid":"PBO:0054597"}


id: GO:1900836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of emericellin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900185"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of emericellin biosynthetic process","termid":"GO:1900834"},{"relation_name":"positively_regulates","term_name":"emericellin biosynthetic process","termid":"GO:1900766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of emericellin biosynthetic process","termid":"GO:1900836"}


id: GO:0098672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the CRISPR-cas system of its host. Bacteria and archaea use CRISPR-Cas adaptive immune systems to defend themselves from infection by bacteriophages (phages), and phages have various mechanisms to counter the CRISPR-cas system.","definition_xrefs":["PMID:26416740","PMID:28749735","PMID:23242138","PMID:23446421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host CRISPR-cas system","secondary_identifiers":["VZ:3962"],"synonyms":[{"name":"CRISPR-cas system evasion by virus","type":"exact"},{"name":"anti-CRISPR","type":"broad"},{"name":"evasion by virus of CRISPR-cas system","type":"related"},{"name":"inhibition of host CRISPR-cas system by virus","type":"related"},{"name":"suppression of host CRISPR-cas system","type":"exact"}],"termid":"GO:0098672"}


id: GO:0002675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"positively_regulates","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acute inflammatory response","synonyms":[{"name":"activation of acute inflammatory response","type":"narrow"},{"name":"stimulation of acute inflammatory response","type":"narrow"},{"name":"up regulation of acute inflammatory response","type":"exact"},{"name":"up-regulation of acute inflammatory response","type":"exact"},{"name":"upregulation of acute inflammatory response","type":"exact"}],"termid":"GO:0002675"}


id: PBO:0058213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4505","termid":"PBO:0058213"}


id: PBO:0078898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 8-2","termid":"PBO:0078898"}


id: PBO:0002662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase Pik3","termid":"PBO:0002662"}


id: PBO:0088696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein","termid":"PBO:0088696"}


id: PBO:0063088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 6","termid":"PBO:0063088"}


id: GO:0102963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (S)-reticulinium(1+) + NADPH + O2 = (S)-corytuberine + NADP + 2 H2O.","definition_xrefs":["PMID:18230623","RHEA:51540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(S)-corytuberine synthase activity","secondary_identifiers":["EC:1.14.19.51","MetaCyc:RXN-9314"],"termid":"GO:0102963"}


id: PBO:0085504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; has an extraribosomal function in regulation of RPS28B, in which Rps28Ap binds to a decapping complex via Edc3p, which then binds to RPS28B mRNA leading to its decapping and degradation; homologous to mammalian ribosomal protein S28, no bacterial homolog; RPS28A has a paralog, RPS28B, that arose from the whole genome duplication","termid":"PBO:0085504"}


id: GO:0004974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a leukotriene to initiate a change in cell activity. Leukotrienes are pharmacologically active substances with a set of three conjugated double bonds; some contain a peptide group based on cysteine.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid receptor activity","termid":"GO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"leukotriene receptor activity","termid":"GO:0004974"}


id: PBO:0068954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 198, pseudogene","termid":"PBO:0068954"}


id: PBO:0066897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 197","termid":"PBO:0066897"}


id: MOD:01823
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysTMT6plex-126 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01823"}


id: PBO:0051697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit E","termid":"PBO:0051697"}


id: PBO:0068406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 225","termid":"PBO:0068406"}


id: GO:1900629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methanophenazine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanophenazine metabolic process","synonyms":[{"name":"methanophenazine metabolism","type":"exact"}],"termid":"GO:1900629"}


id: GO:0102586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-malonylglucoside + 1-O-sinapoyl-beta-D-glucose = cyanidin 3-O-[2''-O-(2''-O-(sinapoyl) xylosyl) 6'-O-(p-coumaroyl) glucoside] 5-O-[6''-O-(malonyl) glucoside + beta-D-glucose.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cyanidin 3-O-[2''-O-(2''-O-(sinapoyl) xylosyl) 6''-O-(p-coumaroyl) glucoside] 5-O-[6''-O-(malonyl) glucoside] sinapoyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15332"],"termid":"GO:0102586"}


id: PBO:0034475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidylethanolamine_level","termid":"PBO:0034475"}


id: GO:0031297
data:
  {"annotated_genes":["SJAG_02198","SJAG_03300","SJAG_02822","SJAG_01832","SJAG_03843","SJAG_01374","SJAG_04971","SJAG_04272","SJAG_01044","SJAG_05012","SJAG_02439","SJAG_03728","SJAG_03097","SJAG_02465","SJAG_00727","SJAG_01584","SJAG_01185","SJAG_03898","SJAG_00177","SJAG_02992","SJAG_02214","SJAG_01221","SJAG_02294","SJAG_01572","SJAG_02724","SJAG_02299","SJAG_02079","SJAG_02698","SJAG_05237","SJAG_05180","SJAG_00623","SJAG_01076","SJAG_00935","SJAG_01677","SJAG_04183","SJAG_01410","SJAG_03780","SJAG_05372"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85203,85630,86979,90656,92074,92238,93571,95150,95369,95462,96740,97264,97615,100277,101861,102756,103895,104288,104656,105226,108678,108679,110451,112992,113294,113633],"is_not":false,"summary":null,"term":"GO:0031297"},{"annotations":[90871,85201,103870,105693,108676,91119,95148,86976,92237,92071,94330,95032,105224,103894,112991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990426"},{"annotations":[112603,102251,85033],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120292"},{"annotations":[108680,100278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071932"},{"annotations":[112993,111688,87560,95034,95151,85204,105695,85631,92756,92239,106107,110452],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120290"}]},"cv_name":"biological_process","definition":"The process in which a DNA replication fork that has stalled is restored to a functional state and replication is restarted. The stalling may be due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes.","definition_xrefs":["PMID:17660542","PMID:15367656","PMID:11459955","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication maintenance of fidelity","termid":"GO:0045005"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00177":null,"SJAG_00623":null,"SJAG_00727":null,"SJAG_00935":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01185":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01572":null,"SJAG_01584":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02214":null,"SJAG_02294":null,"SJAG_02299":null,"SJAG_02439":null,"SJAG_02465":null,"SJAG_02698":null,"SJAG_02724":null,"SJAG_02822":null,"SJAG_02992":null,"SJAG_03097":null,"SJAG_03300":null,"SJAG_03728":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04183":null,"SJAG_04272":null,"SJAG_04971":null,"SJAG_05012":null,"SJAG_05180":null,"SJAG_05237":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"replication fork processing","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034065"],"synonyms":[{"name":"collapsed replication fork processing","type":"exact"},{"name":"recovery from replication fork arrest","type":"exact"},{"name":"recovery from replication fork arrest at rDNA locus","type":"narrow"},{"name":"recovery from replication fork stalling","type":"exact"},{"name":"recovery from replication fork stalling at rDNA locus","type":"narrow"},{"name":"replication fork processing at rDNA locus","type":"narrow"},{"name":"replication fork processing at ribosomal DNA locus","type":"narrow"},{"name":"replication fork restart","type":"related"},{"name":"replication restart","type":"related"}],"termid":"GO:0031297","terms_by_termid":{"GO:0031297":null,"GO:0071932":null,"GO:0120290":null,"GO:0120292":null,"GO:1990426":null}}


id: GO:0099150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic specialization assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"postsynaptic specialization assembly","termid":"GO:0098698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of postsynaptic specialization assembly","termid":"GO:0099150"}


id: PBO:0110509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 1 like, pseudogene","termid":"PBO:0110509"}


id: FYPO:0003319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which mannose-specific flocculation is increased. Mannose-specific flocculation is the non-sexual aggregation of cells, mediated via the binding of cell wall proteins on one cell to mannose residues on the other, and when it is increased cells adhere to each other more strongly or to a greater extent than normal.","definition_xrefs":["PomBase:mah","GO:0036350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell-cell adhesion","termid":"FYPO:0005760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased mannose-specific flocculation","synonyms":[{"name":"increased cell-cell adhesion involved in mannose-specific flocculation","type":"exact"},{"name":"increased mannose-specific flocculation during mitotic cell cycle","type":"related"},{"name":"increased mannose-specific flocculation during vegetative growth","type":"exact"}],"termid":"FYPO:0003319"}


id: PBO:0072705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1 pseudogene 1","termid":"PBO:0072705"}


id: SOFP:linked_to
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linked_to","termid":"SOFP:linked_to"}


id: PBO:0051663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innate immunity activator","termid":"PBO:0051663"}


id: PBO:0084384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity glucose transporter of the major facilitator superfamily; expression is induced by Hxk2p in the presence of glucose and repressed by Rgt1p when glucose is limiting; HXT1 has a paralog, HXT6, what arose from the whole genome duplication","termid":"PBO:0084384"}


id: GO:0090606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which microorganisms produce an extracellular matrix and form multicellular aggregates at an air-liquid interface.","definition_xrefs":["GOC:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species biofilm formation","termid":"GO:0044010"},{"relation_name":"is_a","term_name":"surface biofilm formation","termid":"GO:0090604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species surface biofilm formation","secondary_identifiers":["GO:0032022"],"synonyms":[{"name":"multicellular pellicle formation","type":"related"}],"termid":"GO:0090606"}


id: PBO:0040329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 4","termid":"PBO:0040329"}


id: PBO:0065071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 2","termid":"PBO:0065071"}


id: GO:0032810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sterol response element (SRE), a nonpalindromic sequence found in the promoters of genes involved in lipid metabolism.","definition_xrefs":["GOC:vk","PMID:11994399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0000976","GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"sterol response element binding","synonyms":[{"name":"SRE binding","type":"exact"}],"termid":"GO:0032810"}


id: PBO:0053208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 7B","termid":"PBO:0053208"}


id: FYPO:0000023
data:
  {"alleles_by_uniquename":{"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115539,115444,115543,115540],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0000648"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has an abnormally low volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02013":null,"SJAG_03048":null,"SJAG_04280":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"small cell","references_by_uniquename":{"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_03048","SJAG_02013","SJAG_04280"],"single_locus_genotype_uniquenames":["pyp1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell size: decreased","type":"related"},{"name":"decreased cell size","type":"exact"},{"name":"reduced cell size","type":"exact"}],"termid":"FYPO:0000023","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0043902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein 2","termid":"PBO:0043902"}


id: PBO:0005767
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.99.-","termid":"PBO:0005767"}


id: PBO:0055998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM1 homolog, mRNA degradation associated pseudogene 1","termid":"PBO:0055998"}


id: PBO:0069615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 892, pseudogene","termid":"PBO:0069615"}


id: SO:0000894
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by DNA modifications, resulting in repression of transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced","termid":"SO:0000893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_DNA_modification","synonyms":[{"name":"silenced by DNA modification","type":"exact"}],"termid":"SO:0000894"}


id: GO:1903561
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any vesicle that is part of the extracellular region.","definition_xrefs":["GOC:pm","GO_REF:0000064","GOC:TermGenie","PMID:24769233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle","termid":"GO:0031982"},{"relation_name":"is_a","term_name":"extracellular membrane-bounded organelle","termid":"GO:0065010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extracellular vesicle","synonyms":[{"name":"microparticle","type":"related"}],"termid":"GO:1903561"}


id: PBO:0017463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_host","termid":"PBO:0017463"}


id: PBO:0001548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom70 (predicted)","termid":"PBO:0001548"}


id: PBO:0002363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L34","termid":"PBO:0002363"}


id: PBO:0038317
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"authors","termid":"PBO:0038317"}


id: RO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in","termid":"RO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function_of","termid":"RO:0000079"}


id: GO:0097305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alcohol stimulus.","definition_xrefs":["PMID:24014527","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alcohol","secondary_identifiers":["GO:1990335"],"synonyms":[{"name":"process resulting in tolerance to alcohol","type":"narrow"}],"termid":"GO:0097305"}


id: GO:0035645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell of the intestine.","definition_xrefs":["GOC:BHF","CL:0002504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enteric smooth muscle cell differentiation","synonyms":[{"name":"intestinal smooth muscle cell differentiation","type":"exact"}],"termid":"GO:0035645"}


id: GO:0018320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient methylation of peptidyl-cysteine to form S-methyl-L-cysteine.","definition_xrefs":["RESID:AA0234"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-methyl-L-cysteine (obsolete GO:0018320)","termid":"GO:0018320"}


id: PBO:0062519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily K member 5","termid":"PBO:0062519"}


id: PBO:0061429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 2","termid":"PBO:0061429"}


id: FYECO:0000220
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A nitrogen source shift condition in which cells are first grown in a medium with glutamate as the nitrogen source, and then shifted to a medium with proline as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen source shift","termid":"FYECO:0000221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen source shift, glutamate to proline","termid":"FYECO:0000220"}


id: PBO:0111063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, antisense ubp8","termid":"PBO:0111063"}


id: GO:0015427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ABC-type efflux porter activity (obsolete GO:0015427)","synonyms":[{"name":"ABC-type efflux porter activity","type":"exact"}],"termid":"GO:0015427"}


id: PBO:0054926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2340","termid":"PBO:0054926"}


id: PBO:0031463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_lead","termid":"PBO:0031463"}


id: FYPO:0005844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K9 trimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me3 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished silent mating-type cassette histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 trimethylation abolished at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0005844"}


id: PBO:0064504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit E","termid":"PBO:0064504"}


id: GO:0033695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a quinone or similar acceptor molecule.","definition_xrefs":["EC:1.17.5.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}


id: PBO:0064425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 3","termid":"PBO:0064425"}


id: PBO:0073429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a, subunit 3 pseudogene 1","termid":"PBO:0073429"}


id: PBO:0040850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 4","termid":"PBO:0040850"}


id: MOD:00002
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-glycosylserine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-glycosyl-L-serine","synonyms":[{"name":"OGlycoSer","type":"exact"}],"termid":"MOD:00002"}


id: GO:0033460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"GAG codon-amino acid adaptor activity","synonyms":[{"name":"glutamic acid tRNA","type":"related"}],"termid":"GO:0033460"}


id: PBO:0055104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2522","termid":"PBO:0055104"}


id: PBO:0045339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 11 pseudogene 1","termid":"PBO:0045339"}


id: FYPO:0002839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromosome during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromosome during vegetative growth","type":"exact"}],"termid":"FYPO:0002839"}


id: PBO:0057077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR155 host gene","termid":"PBO:0057077"}


id: GO:0097385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed necrotic cell death occurring as a result of a starvation stimulus (deprivation of nourishment).","definition_xrefs":["GOC:mtg_apoptosis","GOC:pg","PMID:13679856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"},{"relation_name":"is_a","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed necrotic cell death in response to starvation","synonyms":[{"name":"necrotic cell death in response to starvation","type":"broad"}],"termid":"GO:0097385"}


id: FYPO:0007419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere tethering at the nuclear periphery is decreased during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere localization","termid":"FYPO:0007418"},{"relation_name":"is_a","term_name":"abnormal heterochromatin tethering at nuclear periphery","termid":"FYPO:0007768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased telomere tethering at nuclear periphery during G0","synonyms":[{"name":"decreased telomere anchoring at nuclear periphery during G0","type":"exact"},{"name":"decreased telomere tethering to NE in G0","type":"related"},{"name":"decreased telomere tethering to NE in quiescence","type":"related"},{"name":"increased telomere detachment from nuclear envelope in quiescence","type":"related"}],"termid":"FYPO:0007419"}


id: PBO:0048278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT13 antisense RNA 1","termid":"PBO:0048278"}


id: GO:0000324
data:
  {"annotated_genes":["SJAG_03450","SJAG_00181","SJAG_00018","SJAG_00299","SJAG_00534","SJAG_01505","SJAG_03608","SJAG_01320","SJAG_05213","SJAG_01509","SJAG_01236","SJAG_03951","SJAG_04616","SJAG_03072","SJAG_03009","SJAG_05294","SJAG_03497","SJAG_03987","SJAG_00570","SJAG_00821","SJAG_02344","SJAG_04975","SJAG_04023","SJAG_03405","SJAG_02581","SJAG_07012","SJAG_04232","SJAG_02100","SJAG_01978","SJAG_02432","SJAG_02943","SJAG_03511","SJAG_01033","SJAG_03725","SJAG_03256","SJAG_04819","SJAG_01913","SJAG_01219","SJAG_03960","SJAG_02957","SJAG_04312","SJAG_02029","SJAG_03447","SJAG_01095","SJAG_04637","SJAG_00877","SJAG_03928","SJAG_01183","SJAG_04471","SJAG_03508","SJAG_02076","SJAG_03137","SJAG_03652","SJAG_01078","SJAG_04643","SJAG_03138","SJAG_02665","SJAG_01795","SJAG_02289","SJAG_01803","SJAG_01507","SJAG_01407","SJAG_00589","SJAG_02196","SJAG_03667","SJAG_02565","SJAG_04966","SJAG_02656","SJAG_03022","SJAG_01571","SJAG_03976","SJAG_02315","SJAG_02495","SJAG_00457","SJAG_02962","SJAG_05184","SJAG_02902","SJAG_01400","SJAG_00516","SJAG_02414","SJAG_01072","SJAG_04506","SJAG_00620","SJAG_00051","SJAG_04717","SJAG_02356","SJAG_02103","SJAG_00638","SJAG_03363","SJAG_01990","SJAG_01471","SJAG_01088","SJAG_02603","SJAG_03406","SJAG_04015","SJAG_05342","SJAG_02694","SJAG_04790","SJAG_00771","SJAG_04785","SJAG_00132","SJAG_01941","SJAG_00732","SJAG_01324","SJAG_04502","SJAG_04867","SJAG_03403","SJAG_02060","SJAG_04955","SJAG_02716","SJAG_01319","SJAG_03400","SJAG_05245","SJAG_05210","SJAG_03586","SJAG_01032","SJAG_04963","SJAG_03909","SJAG_04725","SJAG_01619","SJAG_01868","SJAG_02699","SJAG_02433","SJAG_00824","SJAG_01080","SJAG_02782","SJAG_00688","SJAG_01991","SJAG_04167","SJAG_01612","SJAG_02440","SJAG_01344","SJAG_02853","SJAG_01112","SJAG_03371","SJAG_01299","SJAG_02117","SJAG_04698","SJAG_00587","SJAG_00115","SJAG_00402","SJAG_03848","SJAG_01983","SJAG_03895","SJAG_02578","SJAG_01817","SJAG_00212","SJAG_02330","SJAG_05194","SJAG_03100","SJAG_02114","SJAG_03313","SJAG_04714","SJAG_02132","SJAG_01493","SJAG_01027","SJAG_00029","SJAG_03089","SJAG_03899","SJAG_00209","SJAG_03316","SJAG_01783","SJAG_03250","SJAG_02023","SJAG_03656","SJAG_01145","SJAG_04426","SJAG_01036","SJAG_03442","SJAG_03606"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83512,83973,84171,84468,84477,86164,86165,86517,86518,86519,86520,86521,86522,86523,86524,86525,87842,90082,90510,90860,91127,92126,92554,93033,93120,93674,93702,94451,94612,94617,95285,97602,97936,98907,99043,99120,99412,99547,99886,100117,100512,100753,103672,103762,104414,104952,105474,105574,105591,105940,106163,107109,108500,108883,109021,109808,110335,110902,113013,113730,114138,114381],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[101874,93703,97755,110340,89959,93915,83513,109469,110609,90511,112026],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000328"},{"annotations":[93121,99703,103984,94437,94681,104817,96314,102793,85345,85098,89807,92038,98063,101088,101833,94944,96099,90670,104415,111040,113437,106401,113794,108726,96367,89005,86424,92761,91952,94903,98908,106406,109720,112731,85875,113208,114543,85181,90073,92082,88922,96063,99952,102800,113080,101014,114382,112804,86247,91823,93430,101248,85167,105400,89753,113566,109399,94119,90637,106011,87520,89808,105514,106493,90358,106537,85133,112375,114000,86188,88074,113731,92475,93692,105564,89566,110675,91709,105428,94633,88137,106164,89933,94780,85119,103423,96338,106129,109809,84050,103324,110506,111733,90099,92195,92677,96025,99915,109581,110499,99548,114909,97534,97717,100029,83764,103531,107943,84068],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000329"}]},"cv_name":"cellular_component","definition":"A vacuole that has both lytic and storage functions. The fungal vacuole is a large, membrane-bounded organelle that functions as a reservoir for the storage of small molecules (including polyphosphate, amino acids, several divalent cations (e.g. calcium), other ions, and other small molecules) as well as being the primary compartment for degradation. It is an acidic compartment, containing an ensemble of acid hydrolases. 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id: MOD:01240
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks the N6-amino of a peptidyl lysine with the carboxyl of leucyl-arginyl-glycyl-glycine, the C-terminal tetrapeptide of ubiquitin.","definition_xrefs":["PubMed:10504701","Unimod:535"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"ubiquitinylated lysine","termid":"MOD:01148"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"ubiquitination signature tetrapeptidyl lysine","synonyms":[{"name":"LeuArgGlyGly","type":"related"},{"name":"Ubiquitination","type":"related"}],"termid":"MOD:01240"}


id: PBO:0068038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 343","termid":"PBO:0068038"}


id: PBO:0031910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase Ura6 (predicted)","termid":"PBO:0031910"}


id: GO:0046485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.","definition_xrefs":["ISBN:0198506732","PMID:15337120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"},{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ether lipid metabolic process","secondary_identifiers":["Wikipedia:Ether_lipid"],"synonyms":[{"name":"ether lipid metabolism","type":"exact"},{"name":"plasmalogen metabolic process","type":"narrow"}],"termid":"GO:0046485"}


id: GO:0016680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, NAD or NADP as acceptor","secondary_identifiers":["EC:1.10.1.-"],"termid":"GO:0016680"}


id: PR:O13614
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1002 gene.","definition_xrefs":["UniProtKB:O13614","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S10-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.08","synonyms":[{"name":"Spom972h-rps1002","type":"exact"}],"termid":"PR:O13614"}


id: PBO:0028443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_double-strand_break_formation_at_mating-type_locus","termid":"PBO:0028443"}


id: PBO:0034189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_historical_homology_relationship_with","termid":"PBO:0034189"}


id: MOD:00000
data:
  {"annotated_genes":["SJAG_02763","SJAG_02592","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115678,115429,115431,115432,115430,115677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[115786,115625,115785,115784,115567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00696"}]},"cv_name":"PSI-MOD","definition":"Covalent modification of, or a change resulting in an alteration of the measured molecular mass of, a peptide or protein amino acid residue.","definition_xrefs":["PubMed:18688235"],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_04551":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null},"synonyms":[{"name":"ModRes","type":"exact"}],"termid":"MOD:00000","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0036460":null,"GO:0042149":null,"GO:0071475":null,"GO:0120306":null,"GO:1904547":null,"MOD:00046":null,"MOD:00696":null}}


id: PBO:0000653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc4 (predicted)","termid":"PBO:0000653"}


id: GO:2000332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood microparticle formation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood microparticle formation","synonyms":[{"name":"regulation of microparticle generation","type":"exact"},{"name":"regulation of microparticle release","type":"exact"}],"termid":"GO:2000332"}


id: GO:0046335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanolamine metabolic process","termid":"GO:0006580"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ethanolamine biosynthetic process","synonyms":[{"name":"ethanolamine anabolism","type":"exact"},{"name":"ethanolamine biosynthesis","type":"exact"},{"name":"ethanolamine formation","type":"exact"},{"name":"ethanolamine synthesis","type":"exact"}],"termid":"GO:0046335"}


id: GO:0098961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a ribonucleoprotein complex along microtubules in nerve cell dendrites.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"dendritic transport","termid":"GO:0098935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"dendritic transport of ribonucleoprotein complex","synonyms":[{"name":"dendritic transport of RNP complex","type":"exact"}],"termid":"GO:0098961"}


id: PBO:0079991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 29","termid":"PBO:0079991"}


id: PBO:0064850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 1","termid":"PBO:0064850"}


id: GO:1900884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tridecane biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tridecane metabolic process","termid":"GO:1900893"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"tridecane biosynthetic process","termid":"GO:1900632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tridecane biosynthetic process","synonyms":[{"name":"regulation of tridecane anabolism","type":"exact"},{"name":"regulation of tridecane biosynthesis","type":"exact"},{"name":"regulation of tridecane formation","type":"exact"},{"name":"regulation of tridecane synthesis","type":"exact"}],"termid":"GO:1900884"}


id: PBO:0065767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PZP alpha-2-macroglobulin like","termid":"PBO:0065767"}


id: PATO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000311 color hue value (obsolete PATO:0000311)","termid":"PATO:0000311"}


id: PBO:0034317
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_II_bouton","termid":"PBO:0034317"}


id: SO:0001670
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory promoter element that is distal from the TSS.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal_promoter_element","synonyms":[{"name":"distal promoter element","type":"related"}],"termid":"SO:0001670"}


id: GO:0098899
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the spine apparatus membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"spine apparatus","termid":"GO:0097444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"spine apparatus lumen","termid":"GO:0098899"}


id: GO:0061274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric distal tubule over time, from its formation to the mature structure. The mesonephric distal tubule is a mesonephric nephron tubule that begins at the terminal segment of the proximal tubule and ends at the mesonephric connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"},{"relation_name":"is_a","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric distal tubule development","termid":"GO:0061274"}


id: FYPO:0001060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutamate into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutamate import during vegetative growth","termid":"FYPO:0001059"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"decreased glutamate import","termid":"FYPO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased glutamate import during vegetative growth","synonyms":[{"name":"decreased L-glutamate import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased L-glutamate import during vegetative growth","type":"exact"},{"name":"decreased glutamate import during mitotic cell cycle","type":"related"},{"name":"decreased glutamate import into cell during vegetative growth","type":"exact"},{"name":"decreased glutamate uptake during vegetative growth","type":"exact"},{"name":"reduced glutamate import during vegetative growth","type":"exact"}],"termid":"FYPO:0001060"}


id: GO:0072272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron in the metanephros. The proximal/distal axis is defined by a line that runs from the center of the kidney (proximal end) outward (distal end).","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"},{"relation_name":"part_of","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in metanephric nephron development","synonyms":[{"name":"proximal-distal pattern formation involved in metanephric nephron development","type":"exact"},{"name":"proximal/distal metanephric nephron patterning","type":"exact"}],"termid":"GO:0072272"}


id: PBO:0089261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic alanine-tRNA ligase Ala1","termid":"PBO:0089261"}


id: GO:0052354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of carbohydrate molecules within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of carbohydrate in other organism involved in symbiotic interaction (obsolete GO:0052354)","synonyms":[{"name":"catabolism by organism of carbohydrate in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052354"}


id: PBO:0083715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein that promotes export of misfolded polypeptides; required for ER-associated protein degradation of misfolded or unassembled proteins; initiates export of aberrant polypeptides from ER lumen by threading them into ER membrane and routing them to Hrd1p for ubiquitination; function normally requires N-terminal acetylation by NatB; N- and C- termini protrude into cytoplasm; similar to Dfm1p; homolog of mammalian derlin-1","termid":"PBO:0083715"}


id: PATO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being such that every part of the surface or the circumference is equidistant from the center.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elliptic","termid":"PATO:0000947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular","synonyms":[{"name":"round","type":"related"},{"name":"rounded","type":"related"}],"termid":"PATO:0000411"}


id: RO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has the potential to develop into y iff x develops into y or if x is capable of developing into y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_developmental_potential_involving","termid":"RO:0002384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_potential_to_develop_into","termid":"RO:0002387"}


id: PBO:0051299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-35 (pseudogene)","termid":"PBO:0051299"}


id: PBO:0077833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP73 antisense RNA 1","termid":"PBO:0077833"}


id: PBO:0042051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 110","termid":"PBO:0042051"}


id: PBO:0051177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-65 (pseudogene)","termid":"PBO:0051177"}


id: GO:0004427
data:
  {"annotated_genes":["SJAG_04242","SJAG_01875","SJAG_01154","SJAG_02679"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89750,92850,96146,101316,110768],"is_not":false,"summary":null,"term":"GO:0004427"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + H2O = H+ + 2 phosphate.","definition_xrefs":["EC:3.6.1.1","RHEA:24576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01154":null,"SJAG_01875":null,"SJAG_02679":null,"SJAG_04242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inorganic diphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00004","Reactome:R-HSA-6788912","Reactome:R-HSA-449937","Reactome:R-HSA-71732","MetaCyc:INORGPYROPHOSPHAT-RXN"],"synonyms":[{"name":"diphosphate phosphohydrolase activity","type":"related"},{"name":"inorganic diphosphatase activity","type":"exact"},{"name":"inorganic pyrophosphatase activity","type":"related"},{"name":"pyrophosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0004427","terms_by_termid":{"GO:0004427":null}}


id: FYECO:0000028
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which TBC was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000028 + TBC (obsolete FYECO:0000028)","termid":"FYECO:0000028"}


id: PBO:0082991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic copper metallochaperone; transports copper to the secretory vesicle copper transporter Ccc2p for eventual insertion into Fet3p, which is a multicopper oxidase required for high-affinity iron uptake; human homolog ATOX1 can complement yeast atx1 mutant; overexpression of human ATOX1 suppresses lysine auxotrophy of the yeast sod1 null mutant, as does overexpression of yeast ATX1","termid":"PBO:0082991"}


id: GO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spine that originates from the axon, usually from the initial segment.","definition_xrefs":["NIF_Subcellular:sao18239917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron spine","termid":"GO:0044309"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axonal spine","synonyms":[{"name":"axon spine","type":"exact"}],"termid":"GO:0044308"}


id: GO:1905933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell fate determination.","definition_xrefs":["GOC:bhm","GO_REF:0000058","PMID:25793578","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell fate determination","termid":"GO:1905933"}


id: FYPO:0008040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in a cell is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-4,5-bisphosphate level","synonyms":[{"name":"increased phosphatidylinositol-4,5-bisphosphate level in cell","type":"exact"}],"termid":"FYPO:0008040"}


id: PBO:0042798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 290","termid":"PBO:0042798"}


id: GO:0045217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of junctions between cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction maintenance","termid":"GO:0034331"},{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell junction maintenance","synonyms":[{"name":"intercellular junction maintenance","type":"exact"}],"termid":"GO:0045217"}


id: PBO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lon protease homolog Lon1 (predicted)","termid":"PBO:0000538"}


id: GO:0009438
data:
  {"annotated_genes":["SJAG_04726","SJAG_02960","SJAG_02988","SJAG_04404","SJAG_02106","SJAG_01596","SJAG_04674"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84008,88469,96413,98904,108971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[58890,101165,60505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylglyoxal, CH3-CO-CHO, the aldehyde of pyruvic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methylglyoxal metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"methylglyoxal bypass","type":"narrow"},{"name":"methylglyoxal metabolism","type":"exact"},{"name":"methylglyoxal pathway","type":"narrow"}],"termid":"GO:0009438","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: PBO:0090900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane basic amino acid transmembrane transporter","termid":"PBO:0090900"}


id: GO:0010774
data:
  {"annotated_genes":["SJAG_02267","SJAG_03751","SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84518,88910,96637],"is_not":false,"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand invasion","termid":"GO:0000708"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02267":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0006310","GO:0007049","GO:0140013","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"meiotic strand invasion involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010774","terms_by_termid":{"GO:0010774":null}}


id: PBO:0090518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase complex I TFIIS subunit Rpa12","termid":"PBO:0090518"}


id: PBO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by thiamine","termid":"PBO:0002109"}


id: PR:Q09796
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kap111 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin beta-like protein kap111 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.02","synonyms":[{"name":"Spom972h-kap111","type":"exact"},{"name":"karyopherin-111 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09796"}


id: FYPO:0000055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"long microtubules","synonyms":[{"name":"elongated microtubules","type":"exact"},{"name":"long microtubules during mitotic cell cycle","type":"related"},{"name":"long microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defects, long microtubules","type":"exact"}],"termid":"FYPO:0000055"}


id: SO:0000493
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site like CACAGTG, part of a 3' D-recombination signal sequence of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"three_prime_D_recombination_signal_sequence","termid":"SO:0000570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_D_heptamer","synonyms":[{"name":"3'D-HEPTAMER","type":"exact"},{"name":"three prime D heptamer","type":"exact"}],"termid":"SO:0000493"}


id: PBO:0088605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding WD repeat protein, coronin Crn1","termid":"PBO:0088605"}


id: FYPO:0004540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is incrsasd. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased chromatin silencing","synonyms":[{"name":"increased chromatin silencing during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing during vegetative growth","type":"exact"}],"termid":"FYPO:0004540"}


id: PBO:0075047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-10","termid":"PBO:0075047"}


id: GO:0042646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a plastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid stroma","termid":"GO:0009532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid nucleoid","termid":"GO:0042646"}


id: GO:0046248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-pinene, a monoterpene that may be a significant factor affecting bacterial activities in nature.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-pinene metabolic process","termid":"GO:0018867"},{"relation_name":"is_a","term_name":"monoterpene biosynthetic process","termid":"GO:0043693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"alpha-pinene biosynthetic process","synonyms":[{"name":"alpha-pinene anabolism","type":"exact"},{"name":"alpha-pinene biosynthesis","type":"exact"},{"name":"alpha-pinene formation","type":"exact"},{"name":"alpha-pinene synthesis","type":"exact"}],"termid":"GO:0046248"}


id: PBO:0083428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YBR225W","termid":"PBO:0083428"}


id: PBO:0039414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angelman syndrome chromosome region","termid":"PBO:0039414"}


id: GO:0104005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A function that was not selected for in the evolution of an organism, but arises from co-option by another organism, e.g. a human protein used as a virus receptor.","definition_xrefs":["GOC:pdt"],"gene_count":0,"genotype_count":0,"name":"obsolete hijacked molecular function (obsolete GO:0104005)","termid":"GO:0104005"}


id: PBO:0108938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 17","termid":"PBO:0108938"}


id: PBO:0052144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNIP1 antisense RNA 1","termid":"PBO:0052144"}


id: FYPO:0007682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly, exploratory movement, or disassembly of the Cdc42-containing cortical polarity patch is abnormal during mating.","definition_xrefs":["PMID:30279276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cortical polarity patch dynamics during mating","synonyms":[{"name":"abnormal cortical polarity patch dynamics during conjugation with cellular fusion","type":"exact"},{"name":"altered cortical polarity patch dynamics during mating","type":"exact"}],"termid":"FYPO:0007682"}


id: PBO:0091597
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously incorrectly annotated as pex22","termid":"PBO:0091597"}


id: PR:Q10173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein Nuf2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21650:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein nuf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.04c","secondary_identifiers":["UniProtKB:Q10173"],"synonyms":[{"name":"NMS complex subunit nuf2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC27F1.04c","type":"related"},{"name":"Spom972h-NUF2","type":"exact"}],"termid":"PR:Q10173"}


id: PBO:0076183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfatase modifying factor 1","termid":"PBO:0076183"}


id: PBO:0076088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STT3A antisense RNA 1","termid":"PBO:0076088"}


id: PBO:0088246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIA","termid":"PBO:0088246"}


id: GO:0061632
data:
  {"annotated_genes":["SJAG_05212"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88326],"is_not":false,"summary":null,"term":"GO:0061632"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an RNA lariat debranching enzyme.","definition_xrefs":["GOC:dph","PMID:24919400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease activator activity","termid":"GO:0170054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"RNA lariat debranching enzyme activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061632","terms_by_termid":{"GO:0061632":null}}


id: FYPO:0003360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which superoxide dismutase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal superoxide dismutase activity","termid":"FYPO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000002","FYPO:0000654","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"abolished superoxide dismutase activity","synonyms":[{"name":"superoxide dismutase activity abolished","type":"exact"}],"termid":"FYPO:0003360"}


id: PBO:0028920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_glucose_starvation_and_oxidative_stress","termid":"PBO:0028920"}


id: PBO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner nuclear membrane protein Ima1","termid":"PBO:0018192"}


id: PBO:0003770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor (predicted)","termid":"PBO:0003770"}


id: GO:2000159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in heart morphogenesis (obsolete GO:2000159)","termid":"GO:2000159"}


id: PBO:0058723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6851","termid":"PBO:0058723"}


id: GO:0035933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any glucocorticoid hormone into the circulatory system. Glucocorticoids are a class of steroid hormones that regulate a variety of physiological processes, in particular control of the concentration of glucose in blood.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"glucocorticoid secretion","termid":"GO:0035933"}


id: PBO:0039733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C4","termid":"PBO:0039733"}


id: GO:0031455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycine betaine, N-trimethylglycine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine metabolic process","synonyms":[{"name":"N-trimethylglycine metabolic process","type":"exact"},{"name":"N-trimethylglycine metabolism","type":"exact"},{"name":"glycine betaine metabolism","type":"exact"}],"termid":"GO:0031455"}


id: GO:0008091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0015629","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"spectrin","secondary_identifiers":["Wikipedia:Spectrin","NIF_Subcellular:sao536287099"],"termid":"GO:0008091"}


id: GO:0019260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,2-dichloroethane, a major commodity chemical used, for example, in the manufacture of vinyl chloride.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,2-dichloroethane metabolic process","termid":"GO:0018899"},{"relation_name":"is_a","term_name":"halogenated hydrocarbon catabolic process","termid":"GO:0042206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"1,2-dichloroethane catabolic process","secondary_identifiers":["MetaCyc:12DICHLORETHDEG-PWY"],"synonyms":[{"name":"1,2-dichloroethane breakdown","type":"exact"},{"name":"1,2-dichloroethane catabolism","type":"exact"},{"name":"1,2-dichloroethane degradation","type":"exact"}],"termid":"GO:0019260"}


id: PBO:0083435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YLR040C","termid":"PBO:0083435"}


id: PBO:0108934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLEKHB2 pseudogene 1","termid":"PBO:0108934"}


id: PBO:0086792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; transcription induced by the unfolded protein response; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086792"}


id: PBO:0034128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_Is_bouton","termid":"PBO:0034128"}


id: PBO:0072320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 6","termid":"PBO:0072320"}


id: PBO:0091526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly lipid binding protein Mug56","termid":"PBO:0091526"}


id: PR:O13698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malonyl-CoA-acyl carrier protein transacylase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01650","PANTHER:PTHR10982:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl CoA-acyl carrier protein transacylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.05c","secondary_identifiers":["UniProtKB:O13698"],"synonyms":[{"name":"MCT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MCAT","type":"exact"},{"name":"malonyl-CoA:ACP transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13698"}


id: GO:0102834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:0-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:0-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:7948918","GOC:pz","PMID:8066133"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:0-monogalactosyldiacylglycerol acyl-lipid omega-6 desaturase activity (obsolete GO:0102834)","termid":"GO:0102834"}


id: GO:0004519
data:
  {"annotated_genes":["SJAG_04519","SJAG_06613","SJAG_02374","SJAG_01832","SJAG_03539","SJAG_00623","SJAG_02156","SJAG_03994","SJAG_00400","SJAG_02708","SJAG_01623","SJAG_03234","SJAG_02790","SJAG_06022","SJAG_00997","SJAG_04587","SJAG_MIT07","SJAG_01476","SJAG_02621","SJAG_04006","SJAG_02828","SJAG_03328","SJAG_01936","SJAG_05237","SJAG_01948","SJAG_01581","SJAG_02039","SJAG_01884","SJAG_01979","SJAG_03962","SJAG_MIT05","SJAG_04885","SJAG_04435","SJAG_05373","SJAG_03952","SJAG_01262","SJAG_03675","SJAG_01463","SJAG_01433","SJAG_03689","SJAG_03425","SJAG_MIT06","SJAG_04916","SJAG_01569","SJAG_01471","SJAG_02547","SJAG_00754","SJAG_04527","SJAG_04019","SJAG_02553","SJAG_00955","SJAG_04752","SJAG_03796","SJAG_02298","SJAG_04582","SJAG_01173","SJAG_02556","SJAG_02031","SJAG_04907","SJAG_04198","SJAG_01044","SJAG_01648","SJAG_04091","SJAG_04183","SJAG_00306","SJAG_01260","SJAG_01551","SJAG_00772"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66537,84167,96384,100239,102065,106100,110275,115226,115227,115236,115237],"is_not":false,"summary":null,"term":"GO:0004519"},{"annotations":[114951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990599"},{"annotations":[113296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[106044,88179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042781"},{"annotations":[102064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990043"},{"annotations":[100282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990601"},{"annotations":[93200,100283,103897,97265,99310,84431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"},{"annotations":[113297,59330,90780,92996,97266,97617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"},{"annotations":[86413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004520"},{"annotations":[97267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990238"},{"annotations":[97268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"},{"annotations":[114281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070551"},{"annotations":[87723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990174"},{"annotations":[98279,99556,105986,72528,112171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004525"},{"annotations":[92861,95581,114777,111569,101784,101785,92565,90756,100675,100896,109658,111482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000171"},{"annotations":[95582,92862,100676,100897,111483,109659,90757,114778,98151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[86416,85555,105146,114258,84385,85068,109085,112513,103602,86657,91890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004521"},{"annotations":[114283,88237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016891"},{"annotations":[86262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008419"},{"annotations":[84342,94200,105271,99061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004523"},{"annotations":[84590,106177,106973,86418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000014"},{"annotations":[102049,96892,97430,113870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease 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id: PBO:0073800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 6 pseudogene 1","termid":"PBO:0073800"}


id: GO:0019337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetrachloroethylene, a derivative of ethene with the hydrogen atoms replaced by chlorines.","definition_xrefs":["GOC:ai","PMID:7988892","PMID:8663199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon catabolic process","termid":"GO:0042205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"tetrachloroethylene catabolic process","secondary_identifiers":["MetaCyc:PCEDEG-PWY","UM-BBD_pathwayID:tce2"],"synonyms":[{"name":"tetrachloroethene catabolic process","type":"exact"},{"name":"tetrachloroethene catabolism","type":"exact"},{"name":"tetrachloroethylene breakdown","type":"exact"},{"name":"tetrachloroethylene catabolism","type":"exact"},{"name":"tetrachloroethylene degradation","type":"exact"}],"termid":"GO:0019337"}


id: SO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An adaptive island is a genomic island that provides an adaptive advantage to the host.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptive_island","synonyms":[{"name":"adaptive island","type":"exact"}],"termid":"SO:0000775"}


id: PBO:0078214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-7","termid":"PBO:0078214"}


id: PBO:0027986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_normal_septum_morphology","termid":"PBO:0027986"}


id: GO:0051237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which RNA is maintained in a location and prevented from moving elsewhere.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"},{"relation_name":"part_of","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of RNA location","synonyms":[{"name":"RNA retention","type":"exact"},{"name":"maintenance of RNA localization","type":"related"}],"termid":"GO:0051237"}


id: GO:0044730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a bone sialoprotein, an extracellular matrix glycoprotein found on the surface of bones and dentin.","definition_xrefs":["PMID:10642520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"extracellular matrix binding","termid":"GO:0050840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"bone sialoprotein binding","secondary_identifiers":["InterPro:IPR008412"],"synonyms":[{"name":"bone sialoprotein II binding","type":"exact"}],"termid":"GO:0044730"}


id: PBO:0044397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 58, pseudogene","termid":"PBO:0044397"}


id: PBO:0029498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_elongated_vegetative_cell_population_(obsolete_FYPO:0002217)","termid":"PBO:0029498"}


id: PR:Q09867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein efg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.02","synonyms":[{"name":"Spom972h-efg1","type":"exact"}],"termid":"PR:Q09867"}


id: GO:1901054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sarcosine.","definition_xrefs":["GOC:TermGenie","PMID:31402327","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"sarcosine metabolic process","termid":"GO:1901052"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"sarcosine biosynthetic process","synonyms":[{"name":"sarcosine anabolism","type":"exact"},{"name":"sarcosine biosynthesis","type":"exact"},{"name":"sarcosine formation","type":"exact"},{"name":"sarcosine synthesis","type":"exact"}],"termid":"GO:1901054"}


