# terms

id: PBO:0090998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication preinitiation complex assembly protein","termid":"PBO:0090998"}


id: PBO:0085542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; interacts with Kti11p; deletion causes hypersensitivity to zymocin; homologous to mammalian ribosomal protein S7, no bacterial homolog; RPS7B has a paralog, RPS7A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085542"}


id: PBO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase (predicted)","termid":"PBO:0002248"}


id: PBO:0108596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 13A","termid":"PBO:0108596"}


id: GO:0061258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric glomerular visceral epithelial cell. A mesonephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular epithelial cell development","termid":"GO:0061251"},{"relation_name":"is_a","term_name":"podocyte cell fate commitment","termid":"GO:0072149"},{"relation_name":"part_of","term_name":"mesonephric podocyte differentiation","termid":"GO:0061256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric podocyte cell fate commitment","synonyms":[{"name":"mesonephric glomerular visceral epithelial cell fate commitment","type":"exact"}],"termid":"GO:0061258"}


id: PBO:0114429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-Methyl-AMP deaminase","termid":"PBO:0114429"}


id: PBO:0064656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA binding protein 2","termid":"PBO:0064656"}


id: PR:O74398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prickle-like protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.12","secondary_identifiers":["UniProtKB:O74398"],"synonyms":[{"name":"Spom972h-PRICKLE4","type":"exact"}],"termid":"PR:O74398"}


id: PBO:0044615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 17","termid":"PBO:0044615"}


id: PBO:0045810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A1 antisense RNA 1","termid":"PBO:0045810"}


id: GO:2001292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of codeine, an alkaloid found in the opium poppy, Papaver somniferum var. album. Codeine has analgesic, anti-tussive and anti-diarrhoeal properties.","definition_xrefs":["GOC:yaf","PMID:8845855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid catabolic process","termid":"GO:0071274"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound catabolic process","termid":"GO:1901377"},{"relation_name":"is_a","term_name":"codeine metabolic process","termid":"GO:2001291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"codeine catabolic process","synonyms":[{"name":"codeine breakdown","type":"exact"},{"name":"codeine catabolism","type":"exact"},{"name":"codeine degradation","type":"exact"}],"termid":"GO:2001292"}


id: FYPO:0002311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GMP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal GMP binding","termid":"FYPO:0002310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased GMP binding","synonyms":[{"name":"reduced GMP binding","type":"exact"}],"termid":"FYPO:0002311"}


id: SO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, that changes one or more bases, resulting in a different amino acid sequence but where the length is preserved.","definition_xrefs":["EBI:gr","SO:ke","EBI:fc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"missense_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://vat.gersteinlab.org/formats.php","SO:0001584","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","SO:0001783","http://en.wikipedia.org/wiki/Missense_mutation","loinc:LA6698-0"],"synonyms":[{"name":"ANNOVAR:nonsynonymous SNV","type":"related"},{"name":"Jannovar:missense_variant","type":"exact"},{"name":"Seattleseq:missense","type":"exact"},{"name":"Seattleseq:missense-near-splice","type":"related"},{"name":"VAAST:missense_variant","type":"exact"},{"name":"VAAST:non_synonymous_codon","type":"related"},{"name":"VAT:nonsynonymous","type":"exact"},{"name":"VEP:missense_variant","type":"exact"},{"name":"missense","type":"exact"},{"name":"missense codon","type":"exact"},{"name":"snpEff:NON_SYNONYMOUS_CODING","type":"exact"}],"termid":"SO:0001583"}


id: PBO:0113203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Middle sporulation-specific mitogen-activated protein kinase (MAPK); required for prospore membrane development and the production of outer spore wall layers; promotes deposition of the glucan layer of the spore wall by regulating the localization of Gsc2p to sites of spore wall assembly in postmeiotic cells; activated by Cak1p-mediated phosphorylation of threonine (T207) in the activation loop during meiosis I followed by Ssp2p-promoted autophosphorylation of tyrosine (T209) during meiosis II","termid":"PBO:0113203"}


id: PBO:0002711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl aminopeptidase Aap1","termid":"PBO:0002711"}


id: FYPO:0008251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from cenH measured in a cell is lower than normal. cenH is a region located between mat2-P and mat3-M that is homologous to centromeric repeats, and that produces non-coding RNAs and small interfering RNAs.","definition_xrefs":["PMID:25356590","PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased cenH-derived RNA level","termid":"FYPO:0008251"}


id: PBO:0027896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_siRNA_level","termid":"PBO:0027896"}


id: GO:0090551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of manganese.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to manganese starvation","termid":"GO:0090551"}


id: PBO:0016909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug115","termid":"PBO:0016909"}


id: GO:0018586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: butyltin + O2 + 2 H+ + 2 e- = H2O + beta-hydroxybutyltin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mono-butyltin dioxygenase activity (obsolete GO:0018586)","synonyms":[{"name":"MBT dioxygenase activity","type":"exact"}],"termid":"GO:0018586"}


id: PBO:0091140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex subunit Csc4","termid":"PBO:0091140"}


id: PBO:0078760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 3","termid":"PBO:0078760"}


id: PBO:0091665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repxeat protein","termid":"PBO:0091665"}


id: RO:0008501
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship wherein a plant or algae is living on the outside surface of another plant.","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphyte_of","termid":"RO:0008501"}


id: GO:0031170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ferricrocin, a cyclic hexapeptide siderophore with the structure Gly-Ser-Gly-(N5-acetyl-N5-hydroxyornithine)3.","definition_xrefs":["PMID:12828635","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrichrome metabolic process","termid":"GO:0031168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ferricrocin metabolic process","synonyms":[{"name":"ferricrocin metabolism","type":"exact"}],"termid":"GO:0031170"}


id: PBO:0039311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 5, RNA demethylase","termid":"PBO:0039311"}


id: PBO:0089597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDEL receptor","termid":"PBO:0089597"}


id: GO:0005712
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A connection formed between chromatids, visible during meiosis, thought to be the point of the interchange involved in crossing-over.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"chiasma","secondary_identifiers":["Wikipedia:Chiasma_(genetics)"],"termid":"GO:0005712"}


id: GO:0032119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of metal ion","termid":"GO:0051238"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"intracellular zinc ion homeostasis","termid":"GO:0006882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0098771"],"is_obsolete":false,"name":"sequestering of zinc ion","termid":"GO:0032119"}


id: GO:1905379
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of beta-N-acetylhexosaminidase activity.","definition_xrefs":["GOC:TermGenie","PMID:6458607","GO_REF:0000088","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"beta-N-acetylhexosaminidase complex","synonyms":[{"name":"HEX A complex","type":"narrow"},{"name":"HEX B complex","type":"narrow"},{"name":"HEX S complex","type":"narrow"}],"termid":"GO:1905379"}


id: PBO:0072752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 2","termid":"PBO:0072752"}


id: SO:1000123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000123 polypeptide_post_translational_processing_affected (obsolete SO:1000123)","synonyms":[{"name":"polypeptide_post-translational_processing_affected","type":"related"}],"termid":"SO:1000123"}


id: GO:1903961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anion transmembrane transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transmembrane transport","termid":"GO:0034767"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic anion transport","termid":"GO:1903793"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"},{"relation_name":"positively_regulates","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of anion transmembrane transport","synonyms":[{"name":"activation of anion transmembrane transport","type":"narrow"},{"name":"up regulation of anion transmembrane transport","type":"exact"},{"name":"up-regulation of anion transmembrane transport","type":"exact"},{"name":"upregulation of anion transmembrane transport","type":"exact"}],"termid":"GO:1903961"}


id: MOD:01354
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N4 hydrogen atom of an asparagine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["Unimod:149#N","PubMed:11698400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc1 glycosylated residue","termid":"MOD:00517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"}],"termid":"MOD:01354"}


id: GO:0044217
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"other organism part","termid":"GO:0044217"}


id: PBO:0031049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_modification","termid":"PBO:0031049"}


id: PBO:0070375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 2","termid":"PBO:0070375"}


id: GO:1904097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of acid phosphatase activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","PMID:8132635","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase complex","termid":"GO:1903293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"acid phosphatase complex","termid":"GO:1904097"}


id: PBO:0042182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1 interacting protein 1 pseudogene 2","termid":"PBO:0042182"}


id: PBO:0064920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R3B divergent transcript","termid":"PBO:0064920"}


id: PBO:0085010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of transcription elongation; contains a TFIIS-like domain that associates with chromatin and a PHD domain that interacts with H3K4me3; multicopy suppressor of temperature-sensitive ess1 mutations, binds RNA polymerase II large subunit","termid":"PBO:0085010"}


id: PBO:0061580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal Xaa-Pro-Lys N-methyltransferase 1","termid":"PBO:0061580"}


id: GO:0018903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving members of the 1,3-dichloropropene family, which includes cis- and trans-1,3-dichloropropene. The 1,3-dichloropropenes are chlorinated hydrocarbons and the major active ingredients of commercial products for control of plant-parasitic nematodes.","definition_xrefs":["UM-BBD_pathwayID:cpr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,3-dichloropropene metabolic process","synonyms":[{"name":"1,3-dichloropropene metabolism","type":"exact"},{"name":"1,3-dichloropropylene metabolic process","type":"exact"},{"name":"1,3-dichloropropylene metabolism","type":"exact"},{"name":"gamma-chloroallylchloride metabolic process","type":"exact"},{"name":"gamma-chloroallylchloride metabolism","type":"exact"}],"termid":"GO:0018903"}


id: GO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"In organisms that undergo pheromone-induced unidirectional conjugation, the process involved in desensitization following exposure to pheromone stimulus that acts to down-regulate further stimulation or block initial conjugation responses.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative adaptation of signaling pathway","termid":"GO:0022401"},{"relation_name":"part_of","term_name":"response to pheromone regulating pheromone-induced unidirectional conjugation","termid":"GO:0000765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative adaptation of signaling pathway by response to pheromone involved in pheromone-induced unidirectional conjugation","synonyms":[{"name":"adaptation to pheromone during pheromone-induced unidirectional conjugation","type":"related"},{"name":"desensitization to pheromone during pheromone-induced unidirectional conjugation","type":"exact"},{"name":"negative adaptation of signalling pathway by response to pheromone involved in pheromone-induced unidirectional conjugation","type":"exact"}],"termid":"GO:0000766"}


id: PBO:0089225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L38","termid":"PBO:0089225"}


id: PBO:0091834
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lives If Zapped","termid":"PBO:0091834"}


id: GO:0060676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the ureteric bud from the Wolffian duct. This process begins when the bud protrudes from the duct and ends when it is a recognizable bud.","definition_xrefs":["PMID:16916378","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule formation","termid":"GO:0072172"},{"relation_name":"part_of","term_name":"ureteric bud morphogenesis","termid":"GO:0060675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud formation","termid":"GO:0060676"}


id: PBO:0078705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (CAA) 7-1","termid":"PBO:0078705"}


id: GO:0060243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell growth in response to increased cell density.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"part_of","term_name":"contact inhibition","termid":"GO:0060242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell growth involved in contact inhibition","termid":"GO:0060243"}


id: PBO:0071806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 1","termid":"PBO:0071806"}


id: GO:1990232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of phosphomannomutase activity.","definition_xrefs":["PMID:16540464","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase complex","termid":"GO:1990233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"phosphomannomutase complex","synonyms":[{"name":"PMM-1 complex","type":"narrow"},{"name":"PMM-1 dimer","type":"narrow"},{"name":"PMM-2 complex","type":"narrow"},{"name":"PMM-2 dimer","type":"narrow"}],"termid":"GO:1990232"}


id: PR:P87126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.11c","synonyms":[{"name":"Spom972h-cwf2","type":"exact"},{"name":"complexed with cdc5 protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-mRNA-processing protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87126"}


id: PBO:0085844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; YDR222W has a paralog, YLR225C, that arose from the whole genome duplication","termid":"PBO:0085844"}


id: PBO:0056695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific with OB-fold","termid":"PBO:0056695"}


id: PR:O94515
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit zeta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02648","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit zeta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.11","secondary_identifiers":["UniProtKB:O94515"],"synonyms":[{"name":"CCT-zeta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT6A","type":"exact"},{"name":"TCP-1-zeta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94515"}


id: GO:0018949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving m-xylene, (1,3-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-xylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mxy"],"synonyms":[{"name":"m-xylene metabolism","type":"exact"},{"name":"meta-xylene metabolic process","type":"exact"},{"name":"meta-xylene metabolism","type":"exact"}],"termid":"GO:0018949"}


id: PBO:0083081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Divalent metal ion transporter; broad specificity for di-valent and tri-valent metals; post-translationally regulated by levels of metal ions; member of the Nramp family of metal transport proteins","termid":"PBO:0083081"}


id: GO:0031700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adrenomedullin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"adrenomedullin receptor binding","synonyms":[{"name":"adrenomedullin receptor ligand","type":"narrow"}],"termid":"GO:0031700"}


id: PATO:0001469
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the abdomen of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved ventral","synonyms":[{"name":"curved anterior (human torso)","type":"exact"},{"name":"curved inferior (human head)","type":"exact"}],"termid":"PATO:0001469"}


id: PBO:0048988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 1","termid":"PBO:0048988"}


id: PBO:0067163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 216, pseudogene","termid":"PBO:0067163"}


id: GO:1900748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor signaling pathway","termid":"GO:1900746"},{"relation_name":"positively_regulates","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of vascular endothelial growth factor signaling pathway","synonyms":[{"name":"activation of VEGF signaling","type":"exact"},{"name":"activation of VEGF-activated signaling pathway","type":"exact"},{"name":"activation of vascular endothelial growth factor signaling pathway","type":"narrow"},{"name":"activation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"positive regulation of VEGF signaling","type":"exact"},{"name":"positive regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"positive regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"up regulation of VEGF signaling","type":"exact"},{"name":"up regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"up regulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"up regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"up-regulation of VEGF signaling","type":"exact"},{"name":"up-regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"upregulation of VEGF signaling","type":"exact"},{"name":"upregulation of VEGF-activated signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:1900748"}


id: PBO:0042453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 6","termid":"PBO:0042453"}


id: PBO:0058192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4485","termid":"PBO:0058192"}


id: PBO:0111924
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLTH domain","termid":"PBO:0111924"}


id: GO:0043948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of host enzyme activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host catalytic activity (obsolete GO:0043948)","synonyms":[{"name":"activation by symbiont of host enzyme activity","type":"narrow"},{"name":"activation of host enzyme activity","type":"narrow"},{"name":"positive regulation by symbiont of host catalytic activity","type":"exact"},{"name":"positive regulation by symbiont of host enzyme activity","type":"exact"},{"name":"up regulation by symbiont of host enzyme activity","type":"exact"},{"name":"up-regulation by symbiont of host enzyme activity","type":"exact"},{"name":"upregulation by symbiont of host enzyme activity","type":"exact"}],"termid":"GO:0043948"}


id: PBO:0004139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sus1","termid":"PBO:0004139"}


id: FYPO:0001454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to freezing conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth during cellular response to freezing","synonyms":[{"name":"normal cell population growth during cellular response to freezing","type":"exact"},{"name":"normal cellular response to freeze-thawing","type":"related"},{"name":"normal cellular response to freezing","type":"related"},{"name":"normal vegetative cell population growth during cellular response to freezing","type":"exact"}],"termid":"FYPO:0001454"}


id: PBO:0030980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere_inner_repeat","termid":"PBO:0030980"}


id: GO:1901978
data:
  {"annotated_genes":["SJAG_04259","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[112863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell cycle checkpoint.","definition_xrefs":["GOC:TermGenie","PMID:23028116","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cell cycle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001052"],"synonyms":[{"name":"activation of cell cycle checkpoint","type":"narrow"},{"name":"positive regulation of G1/S checkpoint","type":"related"},{"name":"positive regulation of G1/S transition checkpoint","type":"related"},{"name":"up regulation of cell cycle checkpoint","type":"exact"},{"name":"up-regulation of cell cycle checkpoint","type":"exact"},{"name":"upregulation of cell cycle checkpoint","type":"exact"}],"termid":"GO:1901978","terms_by_termid":{"GO:0090267":null,"GO:1905326":null}}


id: PBO:0077341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 80","termid":"PBO:0077341"}


id: MOD:00119
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form L-lanthionine.","definition_xrefs":["ChEBI:21347","RESID:AA0110#CSX","DeltaMass:7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"L-lanthionine","termid":"MOD:01839"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lanthionine (Cys-Ser)","synonyms":[{"name":"(2R,2'R)-3,3'-sulfanediylbis(2-aminopropanoic acid)","type":"exact"},{"name":"(R)-S-(2-amino-2-carboxyethyl)-L-cysteine","type":"exact"},{"name":"(R,R)-2,6-diamino-4-thiaheptanedioic acid","type":"exact"},{"name":"(R,R)-3,3'-thiobis-(2-aminopropanoic acid)","type":"exact"},{"name":"(R,R)-bis(2-amino-2-carboxyethyl)sulfide","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxyethyl)sulfanylpropanoic acid","type":"exact"},{"name":"3,3'-thiobis-L-alanine","type":"exact"},{"name":"L-lanthionine","type":"exact"},{"name":"XLNK-SCys-(L)3Dha","type":"exact"}],"termid":"MOD:00119"}


id: FYPO:0006208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell differs from normal during a cellular response to copper ion starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level","termid":"FYPO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"altered RNA level during cellular response to copper ion starvation","synonyms":[{"name":"abnormal RNA level during cellular response to copper ion starvation","type":"exact"},{"name":"altered RNA level during cellular response to copper starvation","type":"exact"},{"name":"altered RNA level during copper starvation","type":"exact"},{"name":"altered cellular RNA level during cellular response to copper ion starvation","type":"exact"},{"name":"altered transcript level during cellular response to copper ion starvation","type":"exact"}],"termid":"FYPO:0006208"}


id: FYPO:0007905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which beta-glucan biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glucan synthesis","termid":"FYPO:0007904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal beta-glucan synthesis","synonyms":[{"name":"abnormal beta-glucan biosynthetic process","type":"exact"}],"termid":"FYPO:0007905"}


id: GO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which decreases the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction by chemical signal","termid":"GO:0003057"},{"relation_name":"is_a","term_name":"negative regulation of heart contraction","termid":"GO:0045822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"negative regulation of the force of heart muscle contraction by chemical signal","type":"related"}],"termid":"GO:0003108"}


id: GO:1901953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterograde dense core granule transport.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:23358451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"regulation of anterograde dense core granule transport","termid":"GO:1901951"},{"relation_name":"is_a","term_name":"positive regulation of dense core granule transport","termid":"GO:1904811"},{"relation_name":"positively_regulates","term_name":"anterograde neuronal dense core vesicle transport","termid":"GO:1990048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterograde dense core granule transport","synonyms":[{"name":"activation of anterograde dense core granule transport","type":"narrow"},{"name":"up regulation of anterograde dense core granule transport","type":"exact"},{"name":"up-regulation of anterograde dense core granule transport","type":"exact"},{"name":"upregulation of anterograde dense core granule transport","type":"exact"}],"termid":"GO:1901953"}


id: PBO:0088829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP 5'-nucleotidase","termid":"PBO:0088829"}


id: GO:0009254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The continual breakdown and regeneration of peptidoglycan required to maintain the cell wall.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan metabolic process","termid":"GO:0000270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidoglycan turnover","secondary_identifiers":["GO:0009287"],"synonyms":[{"name":"murein turnover","type":"exact"}],"termid":"GO:0009254"}


id: PBO:0040972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BNIP3 pseudogene 43","termid":"PBO:0040972"}


id: PBO:0052432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klotho beta","termid":"PBO:0052432"}


id: PBO:0025551
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined malonic and methylmalonic aciduria","termid":"PBO:0025551"}


id: FYPO:0006913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ketoconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on ketoconazole","synonyms":[{"name":"normal cell population growth in presence of ketoconazole","type":"exact"},{"name":"normal cell population growth on ketoconazole","type":"exact"},{"name":"normal cellular response to ketoconazole","type":"related"},{"name":"normal vegetative cell population growth on ketoconazole","type":"exact"}],"termid":"FYPO:0006913"}


id: FYPO:0002186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a lower volume than normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, small cells (obsolete FYPO:0002186)","synonyms":[{"name":"inviable microcolony, small vegetative cells","type":"exact"}],"termid":"FYPO:0002186"}


id: PBO:0027446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_antisense_RNA_transcription_at_stress_response_genes","termid":"PBO:0027446"}


id: GO:0015679
data:
  {"annotated_genes":["SJAG_04246","SJAG_01493"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83975,110753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions across the plasma membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01493":null,"SJAG_04246":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"plasma membrane copper ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"plasma membrane copper transport","type":"exact"}],"termid":"GO:0015679","terms_by_termid":{"GO:0098705":null}}


id: PBO:0052181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 13","termid":"PBO:0052181"}


id: _global:directly_positively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"_global:directly_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulated_by","secondary_identifiers":["RO:0002024"],"termid":"_global:directly_positively_regulated_by"}


id: SO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which the function of a gene product is unknown with respect to a reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"functional_effect_variant","termid":"SO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function_uncertain_variant","synonyms":[{"name":"function uncertain variant","type":"exact"},{"name":"function_uncertain_variant","type":"exact"}],"termid":"SO:0002220"}


id: GO:1901595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hesperadin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hesperadin","termid":"GO:1901595"}


id: FYPO:0007559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing diethylstilbestrol.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0000257","FYPO:0000139","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on diethylstilbestrol","synonyms":[{"name":"normal cell population growth in presence of diethylstilbestrol","type":"exact"},{"name":"normal cell population growth on DES","type":"exact"},{"name":"normal cell population growth on diethylstilbestrol","type":"exact"},{"name":"normal cellular response to diethylstilbestrol","type":"related"},{"name":"normal vegetative cell population growth on diethylstilbestrol","type":"exact"}],"termid":"FYPO:0007559"}


id: GO:0010738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein kinase A signaling. PKA signaling is the series of reactions, mediated by the intracellular serine/threonine kinase protein kinase A, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"protein kinase A signaling","termid":"GO:0010737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of protein kinase A signaling","synonyms":[{"name":"regulation of PKA signaling cascade","type":"related"},{"name":"regulation of protein kinase A signaling cascade","type":"related"},{"name":"regulation of protein kinase A signalling cascade","type":"related"}],"termid":"GO:0010738"}


id: GO:0005743
data:
  {"annotated_genes":["SJAG_03648","SJAG_01615","SJAG_03334","SJAG_07006","SJAG_02077","SJAG_04845","SJAG_01838","SJAG_05629","SJAG_01865","SJAG_00985","SJAG_04403","SJAG_06002","SJAG_00671","SJAG_01816","SJAG_02809","SJAG_00373","SJAG_01879","SJAG_01120","SJAG_02980","SJAG_00080","SJAG_03490","SJAG_02646","SJAG_04603","SJAG_01179","SJAG_02656","SJAG_04323","SJAG_MIT09","SJAG_04642","SJAG_06046","SJAG_01640","SJAG_00835","SJAG_00197","SJAG_07003","SJAG_02028","SJAG_01141","SJAG_00404","SJAG_01190","SJAG_04000","SJAG_01249","SJAG_00836","SJAG_02598","SJAG_02105","SJAG_01890","SJAG_01589","SJAG_00275","SJAG_03563","SJAG_05398","SJAG_03633","SJAG_04984","SJAG_02473","SJAG_01949","SJAG_03168","SJAG_MIT20","SJAG_04397","SJAG_02876","SJAG_03395","SJAG_05300","SJAG_00547","SJAG_00522","SJAG_01872","SJAG_03173","SJAG_05302","SJAG_00077","SJAG_MIT15","SJAG_02398","SJAG_04568","SJAG_04218","SJAG_MIT13","SJAG_00459","SJAG_03925","SJAG_02564","SJAG_MIT04","SJAG_03337","SJAG_04260","SJAG_01917","SJAG_06603","SJAG_04223","SJAG_03505","SJAG_01043","SJAG_03282","SJAG_01841","SJAG_00133","SJAG_03296","SJAG_05204","SJAG_02501","SJAG_00755","SJAG_02457","SJAG_01639","SJAG_00659","SJAG_03920","SJAG_00933","SJAG_02524","SJAG_02064","SJAG_00721","SJAG_01355","SJAG_00631","SJAG_00438","SJAG_04237","SJAG_04553","SJAG_00601","SJAG_04593","SJAG_04328","SJAG_02484","SJAG_01442","SJAG_00230","SJAG_01077","SJAG_04208","SJAG_00564","SJAG_01063","SJAG_00852","SJAG_00576","SJAG_04929","SJAG_01806","SJAG_01518","SJAG_00308","SJAG_07007","SJAG_01405","SJAG_01911","SJAG_03399","SJAG_00612","SJAG_05221","SJAG_03503","SJAG_01763","SJAG_00760","SJAG_01052","SJAG_MIT03","SJAG_MIT37","SJAG_04514","SJAG_03322","SJAG_07008","SJAG_00915","SJAG_01073","SJAG_03560","SJAG_01924","SJAG_02302","SJAG_02504","SJAG_04014","SJAG_04348","SJAG_01597","SJAG_00542","SJAG_02050","SJAG_04432","SJAG_03038","SJAG_01866","SJAG_03452","SJAG_03114","SJAG_03456","SJAG_02445","SJAG_03524","SJAG_04588","SJAG_00154","SJAG_00354","SJAG_00797","SJAG_02480","SJAG_00079","SJAG_05305","SJAG_00543","SJAG_00976","SJAG_00687","SJAG_03577","SJAG_02975","SJAG_03873","SJAG_04965","SJAG_00626","SJAG_01490","SJAG_03046","SJAG_06382","SJAG_01948","SJAG_04737","SJAG_04122","SJAG_05241","SJAG_02016","SJAG_02002"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57854,62949,67473,71549,84232,84302,84360,84445,84831,84893,85060,85253,85303,85999,86004,86407,86645,86859,87674,87801,87846,87972,88107,88813,88824,88934,89160,89217,90264,90438,90693,90715,91098,91688,91993,92621,93406,93425,94155,94278,94305,94469,94576,94732,95089,95382,95833,96327,96349,96579,97004,97175,97387,97443,98162,98221,98664,98709,98962,99063,99632,99755,100197,100385,100455,100505,100609,100737,101016,102857,103327,103446,103507,103686,103696,103730,104041,104094,104420,105417,105667,105824,107039,108377,108420,109300,109511,109565,109957,110326,110392,110698,110795,110818,110858,111264,111317,111386,111627,111901,112819,112840,112940,113003,113142,113232,113343,113871,114342,114531,115212,115238,115244,115265],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[96543,99883],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[113279,105647,102327,97369,102985,111035,85664,86906,99349,104304],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031314"},{"annotations":[87850,109909],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032478"},{"annotations":[97188,114915],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031942"},{"annotations":[105867],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990524"},{"annotations":[107140],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005745"},{"annotations":[99146,89856,99769,88879,85987,97908,104035,104923,85160,89311,115254,85522,103945,112019,99799,101122,89908,115248,90885,115259,92311],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099617"},{"annotations":[113977],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140275"},{"annotations":[103450,110800,97792,106158],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061617"},{"annotations":[85523,97793,106159,103451,110801],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044284"},{"annotations":[104212,105332],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042720"},{"annotations":[95326,99393,106017,107956,96405,85569],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001405"},{"annotations":[109360,99034,103427],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042721"},{"annotations":[111400,92952,98800,103644,101305],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005744"}]},"cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. 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id: GO:0014909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a smooth muscle cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:mtg_muscle","CL:0000192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell migration","termid":"GO:0014812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle cell migration","termid":"GO:0014909"}


id: PBO:0063868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class A pseudogene 1","termid":"PBO:0063868"}


id: GO:0019108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic aldehyde + NAD+ + H2O = an aromatic acid + NADH + H+.","definition_xrefs":["EC:1.2.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aryl-aldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["UM-BBD_reactionID:r0394","MetaCyc:ARYL-ALDEHYDE-DEHYDROGENASE-RXN","RHEA:11804"],"synonyms":[{"name":"aryl-aldehyde dehydrogenase (NAD) activity","type":"exact"},{"name":"aryl-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0019108"}


id: GO:0016514
data:
  {"annotated_genes":["SJAG_05313","SJAG_01016","SJAG_00743","SJAG_00739","SJAG_02447","SJAG_04005","SJAG_02254","SJAG_02589","SJAG_02869","SJAG_01111","SJAG_03576","SJAG_00735"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83692,86617,89543,90054,90179,90198,90254,91946,103576,104600,109297,111174],"is_not":false,"summary":null,"term":"GO:0016514"}]},"cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the yeast SNF2 or mammalian SMARCA4/BAF190A/BRG1 gene, or an ortholog thereof.","definition_xrefs":["GOC:bhm","PMID:12672490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_02254":null,"SJAG_02447":null,"SJAG_02589":null,"SJAG_02869":null,"SJAG_03576":null,"SJAG_04005":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SWI/SNF complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SWI-SNF complex","type":"exact"}],"termid":"GO:0016514","terms_by_termid":{"GO:0016514":null}}


id: FYPO:0004607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle pole body morphology","synonyms":[{"name":"abnormal SPB morphology","type":"exact"},{"name":"abnormal spindle pole body structure","type":"narrow"}],"termid":"FYPO:0004607"}


id: internal:pombase_gene_id
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombase_gene_id","termid":"internal:pombase_gene_id"}


id: PBO:0031789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_fusion_during_conjugation","termid":"PBO:0031789"}


id: GO:0060262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate frequency or extent of the covalent attachment of a palmitoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of N-terminal protein palmitoylation","termid":"GO:0060254"},{"relation_name":"is_a","term_name":"negative regulation of protein lipidation","termid":"GO:1903060"},{"relation_name":"negatively_regulates","term_name":"N-terminal protein palmitoylation","termid":"GO:0006500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of N-terminal protein palmitoylation","termid":"GO:0060262"}


id: PBO:0044454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 33, pseudogene","termid":"PBO:0044454"}


id: PBO:0090163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin-beta family nuclear import receptor Mtr10","termid":"PBO:0090163"}


id: PBO:0087096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal assembly factor and 66S pre-ribosomal particle constituent; subunit of the Nop7-subcomplex (PeBoW complex), required for an early nucleolar step in pre-60S ribosomal particle maturation; interaction of its ubiquitin-like (UBL) domain with the MIDAS domain in the Rea1p tail triggers release of the subcomplex and possibly other biogenesis factors via cycles of ATP hydrolysis; involved in the processing of 27S pre-rRNA; contains an N-terminal UBL domain and seven C-terminal WD repeats","termid":"PBO:0087096"}


id: GO:0018814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (trans)-phenylacetaldoxime = H2O + phenylacetonitrile.","definition_xrefs":["PMID:25015725","RHEA:20069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phenylacetaldoxime dehydratase activity","secondary_identifiers":["EC:4.8.1.4","KEGG_REACTION:R07638","MetaCyc:4.99.1.7-RXN","UM-BBD_reactionID:r0697"],"synonyms":[{"name":"(Z)-phenylacetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"PAOx dehydratase activity","type":"related"},{"name":"arylacetaldoxime dehydratase activity","type":"exact"}],"termid":"GO:0018814"}


id: PBO:0039301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG14 UDP-N-acetylglucosaminyltransferase subunit","termid":"PBO:0039301"}


id: GO:0071095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to thrombospondin.","definition_xrefs":["PMID:11358957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha3-beta1 integrin-thrombospondin complex","synonyms":[{"name":"ITGA3-ITGB1-THBS1 complex","type":"narrow"}],"termid":"GO:0071095"}


id: GO:0003334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a keratinocyte over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratinocyte development","termid":"GO:0003334"}


id: PBO:0091591
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AStra Associated protein","termid":"PBO:0091591"}


id: GO:0043662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The soluble material inside the peribacteroid membrane, but outside of the bacteroid, within a bacteroid-containing symbiosome.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacteroid-containing symbiosome","termid":"GO:0043660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"peribacteroid fluid","termid":"GO:0043662"}


id: FYPO:0007767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of thiabendazole binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:33925026","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased thiabendazole binding","synonyms":[{"name":"decreased TBZ binding","type":"exact"},{"name":"reduced TBZ binding","type":"exact"},{"name":"reduced thiabendazole binding","type":"exact"}],"termid":"FYPO:0007767"}


id: GO:0019322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pentose biosynthetic process","synonyms":[{"name":"pentose anabolism","type":"exact"},{"name":"pentose biosynthesis","type":"exact"},{"name":"pentose formation","type":"exact"},{"name":"pentose synthesis","type":"exact"}],"termid":"GO:0019322"}


id: FYPO:0002020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation","type":"related"},{"name":"increased RNA level during nitrogen depletion","type":"exact"},{"name":"increased RNA level during nitrogen deprivation","type":"exact"},{"name":"increased transcript level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0002020"}


id: GO:0010949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of phytosterols into the blood by absorption from the small intestine.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intestinal lipid absorption","termid":"GO:1904730"},{"relation_name":"negatively_regulates","term_name":"intestinal phytosterol absorption","termid":"GO:0060752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal phytosterol absorption","termid":"GO:0010949"}


id: PBO:0088916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase/ lysophospholipase fusion protein Dfr1","termid":"PBO:0088916"}


id: GO:0045136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the secondary sexual characteristics over time, from their formation to the mature structures. In humans, these include growth of axillary, chest, and pubic hair, voice changes, testicular/penile enlargement, breast development and menstrual periods. Development occurs in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of secondary sexual characteristics","termid":"GO:0045136"}


id: GO:1901534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"positively_regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"activation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"activation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"activation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"activation of hemopoietic progenitor cell differentiation","type":"narrow"},{"name":"positive regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"positive regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"positive regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"up regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"up regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"up regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"up regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"up-regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"up-regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"up-regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"up-regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"upregulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"upregulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"upregulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"upregulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901534"}


id: PBO:0084700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial glycerol-3-phosphate dehydrogenase; expression is repressed by both glucose and cAMP and derepressed by non-fermentable carbon sources in a Snf1p, Rsf1p, Hap2/3/4/5 complex dependent manner","termid":"PBO:0084700"}


id: PBO:0056240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGOH divergent transcript","termid":"PBO:0056240"}


id: GO:0010506
data:
  {"annotated_genes":["SJAG_00824","SJAG_03371","SJAG_05000","SJAG_04502","SJAG_04435","SJAG_03851","SJAG_01509","SJAG_00457","SJAG_04232","SJAG_02433","SJAG_05346","SJAG_01716","SJAG_01184","SJAG_04249","SJAG_02723","SJAG_04655","SJAG_00704","SJAG_02765","SJAG_00169","SJAG_04496","SJAG_05289","SJAG_00004"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67747,71599,94638,114008],"is_not":false,"summary":null,"term":"GO:0010506"},{"annotations":[114547,105404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010507"},{"annotations":[102772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[104792,104702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[93695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[94960,105819,103535,108001,95533,110744,107107,90219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010508"},{"annotations":[68016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[102382,94083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[85552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00169":null,"SJAG_00457":null,"SJAG_00704":null,"SJAG_00824":null,"SJAG_01184":null,"SJAG_01509":null,"SJAG_01716":null,"SJAG_02433":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03371":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04249":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05000":null,"SJAG_05289":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"regulation of autophagy","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0010506","terms_by_termid":{"GO:0010506":null,"GO:0010507":null,"GO:0010508":null,"GO:0016239":null,"GO:0016242":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: GO:0001659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process in which an organism modulates its internal body temperature.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"temperature homeostasis","secondary_identifiers":["Wikipedia:Thermoregulation"],"synonyms":[{"name":"thermoregulation","type":"exact"}],"termid":"GO:0001659"}


id: GO:0090549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of a carbon source.","definition_xrefs":["PMID:18245858","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbon starvation","termid":"GO:0090549"}


id: GO:0044201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the host nuclear envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear membrane","termid":"GO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear inner membrane","termid":"GO:0044201"}


id: PBO:0026811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_ethanol","termid":"PBO:0026811"}


id: PBO:0034476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_spindle_during_meiosis_I","termid":"PBO:0034476"}


id: PBO:0082770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the spindle-assembly checkpoint complex; delays onset of anaphase in cells with defects in mitotic spindle assembly; forms a complex with Mad1p; regulates APC/C activity during prometaphase and metaphase of meiosis I; gene dosage imbalance between MAD1 and MAD2 leads to chromosome instability","termid":"PBO:0082770"}


id: PBO:0089895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron/zinc ion transmembrane transporter","termid":"PBO:0089895"}


id: GO:0000347
data:
  {"annotated_genes":["SJAG_04310","SJAG_04536","SJAG_05328","SJAG_00992","SJAG_04115","SJAG_04202"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115112,97956,112493,107269,88215,112233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000445"}]},"cv_name":"cellular_component","definition":"The THO complex is a nuclear complex that is required for transcription elongation through genes containing tandemly repeated DNA sequences. The THO complex is also part of the TREX (TRanscription EXport) complex that is involved in coupling transcription to export of mRNAs to the cytoplasm. In S. cerevisiae, it is composed of four subunits: Hpr1p, Tho2p, Thp1p, and Mft1p, while the human complex is composed of 7 subunits.","definition_xrefs":["PMID:16983072","GOC:krc","PMID:11060033","PMID:11979277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00992":null,"SJAG_04115":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04536":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"THO complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000347","terms_by_termid":{"GO:0000445":null}}


id: PBO:0056762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15 pseudogene 1","termid":"PBO:0056762"}


id: PATO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular placement quality inhering in a bearer by virtue of the bearer's placement at an angle that is greater than 180 degrees but less than 360 degrees to another entity.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reflex angle to","termid":"PATO:0001055"}


id: PBO:0031430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glycerol_dehydrogenase_activity","termid":"PBO:0031430"}


id: PR:Q10306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A citrate synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00965","PANTHER:PTHR11739:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.04","secondary_identifiers":["UniProtKB:Q10306"],"synonyms":[{"name":"Spom972h-CS","type":"exact"}],"termid":"PR:Q10306"}


id: GO:0003349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an epicardial cell acquires the specialized structural and/or functional features of a cardiac endothelial cell.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac endothelial cell differentiation","termid":"GO:0003348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac endothelial cell differentiation","termid":"GO:0003349"}


id: GO:2000623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:2000622"},{"relation_name":"negatively_regulates","term_name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:0000184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","synonyms":[{"name":"negative regulation of mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"negative regulation of mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"negative regulation of mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"negative regulation of mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"negative regulation of nonsense-mediated mRNA decay","type":"exact"},{"name":"negative regulation of nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:2000623"}


id: PBO:0034565
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromere_during_vegetative_growth","termid":"PBO:0034565"}


id: PBO:0043802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 2","termid":"PBO:0043802"}


id: GO:1904024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucose catabolic process to lactate via pyruvate.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:20935145","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of fermentation","termid":"GO:1901003"},{"relation_name":"is_a","term_name":"regulation of glucose catabolic process to lactate via pyruvate","termid":"GO:1904023"},{"relation_name":"negatively_regulates","term_name":"glucose catabolic process to lactate via pyruvate","termid":"GO:0019661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0006091","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucose catabolic process to lactate via pyruvate","synonyms":[{"name":"down regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"down regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"down regulation of homofermentation","type":"exact"},{"name":"down regulation of homofermentative lactate fermentation","type":"exact"},{"name":"down regulation of homofermentative pathway","type":"exact"},{"name":"down regulation of homolactate fermentation","type":"exact"},{"name":"down regulation of homolactic fermentation","type":"exact"},{"name":"down-regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"down-regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"down-regulation of homofermentation","type":"exact"},{"name":"down-regulation of homofermentative lactate fermentation","type":"exact"},{"name":"down-regulation of homofermentative pathway","type":"exact"},{"name":"down-regulation of homolactate fermentation","type":"exact"},{"name":"down-regulation of homolactic fermentation","type":"exact"},{"name":"downregulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"downregulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"downregulation of homofermentation","type":"exact"},{"name":"downregulation of homofermentative lactate fermentation","type":"exact"},{"name":"downregulation of homofermentative pathway","type":"exact"},{"name":"downregulation of homolactate fermentation","type":"exact"},{"name":"downregulation of homolactic fermentation","type":"exact"},{"name":"inhibition of glucose catabolic process to lactate via pyruvate","type":"narrow"},{"name":"inhibition of glucose fermentation to lactate via pyruvate","type":"narrow"},{"name":"inhibition of homofermentation","type":"narrow"},{"name":"inhibition of homofermentative lactate fermentation","type":"narrow"},{"name":"inhibition of homofermentative pathway","type":"narrow"},{"name":"inhibition of homolactate fermentation","type":"narrow"},{"name":"inhibition of homolactic fermentation","type":"narrow"},{"name":"negative regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"negative regulation of homofermentation","type":"exact"},{"name":"negative regulation of homofermentative lactate fermentation","type":"exact"},{"name":"negative regulation of homofermentative pathway","type":"exact"},{"name":"negative regulation of homolactate fermentation","type":"exact"},{"name":"negative regulation of homolactic fermentation","type":"exact"}],"termid":"GO:1904024"}


id: PBO:0055094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2512","termid":"PBO:0055094"}


id: PBO:0003869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transporting ATPase Ccc2 (predicted)","termid":"PBO:0003869"}


id: PBO:0071293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 16","termid":"PBO:0071293"}


id: PBO:0053092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 2D","termid":"PBO:0053092"}


id: FYPO:0002487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, and structure of actin cables are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal actin cable morphology","synonyms":[{"name":"normal actin cable morphology during mitotic cell cycle","type":"related"},{"name":"normal actin cable morphology during vegetative growth","type":"exact"},{"name":"normal formin-nucleated actin cable morphology","type":"exact"}],"termid":"FYPO:0002487"}


id: PBO:0049166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 8","termid":"PBO:0049166"}


id: GO:0120109
data:
  {"annotated_genes":["SJAG_01777","SJAG_01837","SJAG_01067","SJAG_03092","SJAG_01263","SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112855],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120110"},{"annotations":[95214,113055,85798,101224,102075],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044820"}]},"cv_name":"biological_process","definition":"The process in which the telomeres are gathered together to a small number of foci per chromosome (usually one per chromosome or fewer), and moved to and tethered at the nuclear periphery, as part of a mitotic cell cycle.","definition_xrefs":["PMID:25778919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere localization","termid":"GO:0034397"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01263":null,"SJAG_01601":null,"SJAG_01777":null,"SJAG_01837":null,"SJAG_03092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitotic telomere clustering and tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120109","terms_by_termid":{"GO:0044820":null,"GO:0120110":null}}


id: GO:0097185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an azide stimulus.","definition_xrefs":["GOC:yaf","PMID:16846222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to azide","termid":"GO:0097184"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to azide","termid":"GO:0097185"}


id: PBO:0048672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase beta 1 like 2","termid":"PBO:0048672"}


id: PBO:0087538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA is comprised of Nat1p, Ard1p, and Nat5p; N-terminally acetylates many proteins, which influences multiple processes such as the cell cycle, heat-shock resistance, mating, sporulation, and telomeric silencing","termid":"PBO:0087538"}


id: GO:0047847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyuridine + phosphate = 2-deoxy-alpha-D-ribose 1-phosphate + uracil.","definition_xrefs":["RHEA:22824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-nucleoside phosphorylase activity","termid":"GO:0016154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"deoxyuridine phosphorylase activity","secondary_identifiers":["EC:2.4.2.2","EC:2.4.2.3","MetaCyc:URA-PHOSPH-RXN"],"termid":"GO:0047847"}


id: FYPO:0005394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which vegetative cell population growth is slower than normal for several generations, with the population growth rate decreasing over successive generations, after which the population resumes growing at a normal or near-normal rate.","definition_xrefs":["PomBase:mah","PMID:12196391"],"direct_ancestors":[{"relation_name":"has_part","term_name":"progressively decreasing vegetative cell population growth rate","termid":"FYPO:0005393"},{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002057"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0001985","FYPO:0002058"],"is_obsolete":false,"name":"progressively decreasing vegetative cell population growth rate followed by return to normal growth rate","synonyms":[{"name":"emergence of telomerase-deficient survivors","type":"related"},{"name":"progressively decreasing cell population growth rate followed by return to normal growth rate during vegetative growth","type":"exact"},{"name":"progressively decreasing cell population proliferation followed by return to normal proliferation","type":"related"},{"name":"progressively decreasing cell proliferation followed by return to normal proliferation","type":"related"},{"name":"progressively reduced cell proliferation followed by return to normal proliferation","type":"related"},{"name":"progressively reduced vegetative cell population growth rate followed by return to normal growth rate","type":"exact"}],"termid":"FYPO:0005394"}


id: GO:0048392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an intermediate mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"intermediate mesoderm formation","termid":"GO:0048391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell differentiation","synonyms":[{"name":"intermediate mesoderm cell differentiation","type":"exact"}],"termid":"GO:0048392"}


id: GO:0072013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the glomus over time from its initial formation until its mature state. The glomus forms from the splanchnic intermediate mesoderm and is the vascularized filtration unit, filtering the blood before it enters the tubules. The glomus is external to the nephron and extends over more than one body segment.","definition_xrefs":["PMID:10572058","GOC:mtg_kidney_jan10","XAO:0000318","PMID:15647339","PMID:9268568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomus development","synonyms":[{"name":"pronephric glomus development","type":"exact"}],"termid":"GO:0072013"}


id: PBO:0061522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethylmaleimide sensitive factor, vesicle fusing ATPase","termid":"PBO:0061522"}


id: GO:0039710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an icosahedral viral capsid in the cytoplasm. Often occurs by assembling around the viral genome.","definition_xrefs":["VZ:1950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic capsid assembly","termid":"GO:0039709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic icosahedral capsid assembly","termid":"GO:0039710"}


id: FYPO:0004739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of the actin cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal actin cytoskeleton during vegetative growth","synonyms":[{"name":"normal actin cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004739"}


id: GO:0070332
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell-surface protein CD20 and the Src family tyrosine kinases Lck, Lyn and Fyn.","definition_xrefs":["PMID:7545683","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CD20-Lck-Lyn-Fyn complex","termid":"GO:0070332"}


id: PBO:0008159
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the phenotypes attributed to imp1 in PMID:18692466 have since been attributed to a truncated allele of SPAC11E3.05","termid":"PBO:0008159"}


id: GO:2000395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin-dependent endocytosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"regulates","term_name":"ubiquitin-dependent endocytosis","termid":"GO:0070086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of ubiquitin-dependent endocytosis","synonyms":[{"name":"regulation of ubiquitin-mediated endocytosis","type":"exact"}],"termid":"GO:2000395"}


id: PBO:0056268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like domain containing 1","termid":"PBO:0056268"}


id: PBO:0082701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the meiotic outer plaque; a membrane-organizing center which is assembled on the cytoplasmic face of the spindle pole body during meiosis II and triggers the formation of the prospore membrane; potential Cdc28p substrate","termid":"PBO:0082701"}


id: PBO:0079543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 5","termid":"PBO:0079543"}


id: PBO:0110988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, DUF34 family, possible chaperone or insertase (PMID: 34572495)","termid":"PBO:0110988"}


id: GO:0051302
data:
  {"annotated_genes":["SJAG_00229","SJAG_02380","SJAG_06270","SJAG_03704","SJAG_03376","SJAG_01790","SJAG_00514","SJAG_02232","SJAG_03581","SJAG_04666","SJAG_01837","SJAG_01456","SJAG_04551","SJAG_02807","SJAG_03681","SJAG_01464","SJAG_04468","SJAG_01114","SJAG_03936","SJAG_03592","SJAG_04776","SJAG_00526","SJAG_00256","SJAG_01386","SJAG_03508","SJAG_01188","SJAG_02169","SJAG_03048","SJAG_03353","SJAG_05290","SJAG_00082","SJAG_03692","SJAG_02392","SJAG_04455","SJAG_03631","SJAG_04943","SJAG_04412","SJAG_00883","SJAG_03887","SJAG_00845","SJAG_01787","SJAG_04597","SJAG_01863","SJAG_02514","SJAG_01805","SJAG_02838","SJAG_03342","SJAG_02592","SJAG_03309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010974"},{"annotations":[98469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98245,88871,98470,103227,95756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[98474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[89495,87754,101157,86758,95677,88872,91698,88958,103367,97366,103228,106316,95757,112079,103677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[90456,86031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[109526,90627,83573,106669,90457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[89845,86032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903490"},{"annotations":[106913,115595,99824,91912,86801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[102507,85273,103177,111643,88443,109527,89846,85901,101300,114082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[83574,90460,88444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[89852,115626,90422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[87868,112867,113704,114878,99608,105353,97034,109529,86037,85847,103274,111644,83576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902412"},{"annotations":[97477,107528,83889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"},{"annotations":[114084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell division","termid":"GO:0051301"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01456":null,"SJAG_01464":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01863":null,"SJAG_02169":null,"SJAG_02232":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02514":null,"SJAG_02592":null,"SJAG_02807":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03376":null,"SJAG_03508":null,"SJAG_03581":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03692":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_03936":null,"SJAG_04412":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04551":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_05290":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell division","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:0051302","terms_by_termid":{"GO:0010974":null,"GO:0031030":null,"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:1902412":null,"GO:1902413":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903490":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


id: GO:0075241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zoospore formation, a process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zoospore formation","termid":"GO:0075240"},{"relation_name":"is_a","term_name":"positive regulation of sporangiospore formation","termid":"GO:0075287"},{"relation_name":"positively_regulates","term_name":"zoospore formation","termid":"GO:0075239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zoospore formation","termid":"GO:0075241"}


id: PBO:0059662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 28","termid":"PBO:0059662"}


id: PBO:0091820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YDR293C","termid":"PBO:0091820"}


id: GO:1904447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of folic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:19762432","GO_REF:0000075","GOC:hal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"folate transmembrane transport","termid":"GO:0098838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"folate import across plasma membrane","synonyms":[{"name":"folate import into cell","type":"exact"},{"name":"folic acid import across plasma membrane","type":"related"}],"termid":"GO:1904447"}


id: PR:P87119
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu34 gene.","definition_xrefs":["UniProtKB:P87119","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger protein mug145 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.03c","synonyms":[{"name":"Spom972h-meu34","type":"exact"},{"name":"meiotic expression up-regulated protein 34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 145 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87119"}


id: PBO:0056205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A13, pseudogene","termid":"PBO:0056205"}


id: PBO:0041043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1/BRCA2-containing complex subunit 3 pseudogene 1","termid":"PBO:0041043"}


id: PBO:0071233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 74","termid":"PBO:0071233"}


id: GO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"endocardial cushion formation","termid":"GO:0003272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in endocardial cushion formation","termid":"GO:0003273"}


id: PBO:0071151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 16","termid":"PBO:0071151"}


id: PBO:0017090
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COX18","termid":"PBO:0017090"}


id: GO:0019255
data:
  {"annotated_genes":["SJAG_01209"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105038],"is_not":false,"summary":null,"term":"GO:0019255"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucose 1-phosphate, a monophosphorylated derivative of glucose with the phosphate group attached to C-1.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucose 1-phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUCOSE1PMETAB-PWY","GO:0006008"],"synonyms":[{"name":"glucose 1-phosphate metabolism","type":"exact"},{"name":"glucose 1-phosphate utilization","type":"related"}],"termid":"GO:0019255","terms_by_termid":{"GO:0019255":null}}


id: MOD:00939
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolyzed N-methylmaleimide cysteine adduct","synonyms":[{"name":"Nmethylmaleimide+water","type":"related"},{"name":"Nmethylmaleimidehydrolysis","type":"related"}],"termid":"MOD:00939"}


id: PBO:0067653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 828, pseudogene","termid":"PBO:0067653"}


id: MOD:01166
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an amino acid residue and 5'-phosphouridine through either a phosphodiester or a phosphoramide bond.","definition_xrefs":["DeltaMass:292","Unimod:417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylated residue","synonyms":[{"name":"5'phos Uridinyl","type":"exact"},{"name":"PhosphoUridine","type":"related"},{"name":"uridine phosphodiester","type":"related"}],"termid":"MOD:01166"}


id: PBO:0049281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase","termid":"PBO:0049281"}


id: GO:0075522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process by which viral mRNA translation is initiated, where a domain in the 5' untranslated region (UTR) of the viral mRNA called an internal ribosome entry site (IRES) binds the host 43S preinitiation complex, circumventing regular cap-dependent translation initiation.","definition_xrefs":["PMID:19632368","GOC:jl","VZ:867","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"IRES-dependent viral translational initiation","termid":"GO:0075522"}


id: GO:0030636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of derivatives of acetic acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete acetate derivative biosynthetic process (obsolete GO:0030636)","synonyms":[{"name":"acetate derivative anabolism","type":"exact"},{"name":"acetate derivative biosynthesis","type":"exact"},{"name":"acetate derivative biosynthetic process","type":"exact"},{"name":"acetate derivative formation","type":"exact"},{"name":"acetate derivative synthesis","type":"exact"}],"termid":"GO:0030636"}


id: PBO:0030591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_lysine_level","termid":"PBO:0030591"}


id: PBO:0029825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_elongated_vegetative_cell_population_(obsolete_FYPO:0002412)","termid":"PBO:0029825"}


id: PBO:0044951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desert hedgehog signaling molecule","termid":"PBO:0044951"}


id: PBO:0060430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide associated complex subunit alpha","termid":"PBO:0060430"}


id: GO:0070334
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to laminin 5.","definition_xrefs":["GOC:mah","PMID:7556090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha6-beta4 integrin-laminin 5 complex","synonyms":[{"name":"ITGA6-ITGB4-LAMA5 complex","type":"narrow"},{"name":"alpha6-beta4 integrin-laminin-332 complex","type":"exact"}],"termid":"GO:0070334"}


id: GO:0009447
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83446],"is_not":false,"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of putrescine, 1,4-diaminobutane; putrescine is the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"putrescine breakdown","type":"exact"},{"name":"putrescine catabolism","type":"exact"},{"name":"putrescine degradation","type":"exact"}],"termid":"GO:0009447","terms_by_termid":{"GO:0009447":null}}


id: PBO:0061897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 3","termid":"PBO:0061897"}


id: PBO:0062366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 1 pseudogene","termid":"PBO:0062366"}


id: GO:0050011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citramalyl-CoA = itaconyl-CoA + H2O.","definition_xrefs":["MetaCyc:ITACONYL-COA-HYDRATASE-RXN","EC:4.2.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"itaconyl-CoA hydratase activity","secondary_identifiers":["RHEA:13785"],"synonyms":[{"name":"citramalyl-CoA hydro-lyase (itaconyl-CoA-forming)","type":"related"},{"name":"citramalyl-CoA hydro-lyase activity","type":"related"},{"name":"itaconyl coenzyme A hydratase activity","type":"related"}],"termid":"GO:0050011"}


id: MOD:01265
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:15549660","Unimod:270#P"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addtion to cytopiloyne","termid":"MOD:00590"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne - site P","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:01265"}


id: GO:0141016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Hydrolyzes mismatched double-stranded DNA and polynucleotides, releasing free thymine and leaving an apyrimidinic (AP) site.","definition_xrefs":["PMID:12711670","EC:3.2.2.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-specific mismatch base pair DNA N-glycosylase activity","termid":"GO:0008263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"G/T mismatch-specific thymine-DNA glycosylase activity","termid":"GO:0141016"}


id: PBO:0083661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) localized protein; involved in ER-associated protein degradation (ERAD), ER stress, and homeostasis; interacts with components of ERAD-L and ERAD-C and Cdc48p; derlin-like family member similar to Der1p","termid":"PBO:0083661"}


id: PBO:0057926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3651","termid":"PBO:0057926"}


id: GO:0030781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 6-O-methylnorlaudanosoline = S-adenosyl-L-homocysteine + nororientaline.","definition_xrefs":["EC:2.1.1.121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-O-methylnorlaudanosoline 5'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.121-RXN","RHEA:11892"],"synonyms":[{"name":"S-adenosyl-L-methionine:6-O-methylnorlaudanosoline 5'-O-methyltransferase activity","type":"related"}],"termid":"GO:0030781"}


id: GO:0010321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vegetative phase change. Vegetative phase change is the set of post-embryonic processes involved in the transition of a plant from a juvenile phase of vegetative development to an adult phase of vegetative development.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"vegetative phase change","termid":"GO:0010050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vegetative phase change","termid":"GO:0010321"}


id: PBO:0070856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 9","termid":"PBO:0070856"}


id: PBO:0065230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR11 antisense RNA 1","termid":"PBO:0065230"}


id: PBO:0076876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 28","termid":"PBO:0076876"}


id: GO:0061686
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99748],"is_not":false,"summary":null,"term":"GO:0061686"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (hercynine) + O2 = hercynylcysteine sulfoxide + H2O.","definition_xrefs":["RHEA:42704","PMID:24828577","GOC:dph","PMID:4276459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.21.3.10"],"synonyms":[{"name":"hercynylcysteine S-oxide synthase","type":"exact"},{"name":"hercynylcysteine sulfoxide synthase","type":"exact"}],"termid":"GO:0061686","terms_by_termid":{"GO:0061686":null}}


id: GO:0003140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the lateral mesoderm with respect to the left and right halves.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"lateral mesoderm development","termid":"GO:0048368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of left/right asymmetry in lateral mesoderm","termid":"GO:0003140"}


id: GO:0006738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide riboside metabolic process","termid":"GO:0046495"},{"relation_name":"is_a","term_name":"pyridine nucleoside catabolic process","termid":"GO:0070638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinamide riboside catabolic process","synonyms":[{"name":"N-ribosylnicotinamide catabolic process","type":"exact"},{"name":"nicotinamide riboside breakdown","type":"exact"},{"name":"nicotinamide riboside catabolism","type":"exact"},{"name":"nicotinamide riboside degradation","type":"exact"}],"termid":"GO:0006738"}


id: PBO:0057396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-4","termid":"PBO:0057396"}


id: GO:0010616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle adaptation","termid":"GO:0010612"},{"relation_name":"is_a","term_name":"negative regulation of muscle adaptation","termid":"GO:0014745"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle adaptation","termid":"GO:0014887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle adaptation","termid":"GO:0010616"}


id: PATO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the base of an organism relative to another entity.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/basal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal to","termid":"PATO:0002349"}


id: GO:0061678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular carbohydrate catabolic process that converts a carbohydrate to pyruvate and either glyceraldehyde or glyceraldehyde-3 phosphate by dehydration and aldol cleavage via a gluconate or 6-phosphogluconate intermediate.","definition_xrefs":["PMID:12921536","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"Entner-Doudoroff pathway","secondary_identifiers":["MetaCyc:Entner-Doudoroff-Pathways"],"termid":"GO:0061678"}


id: PBO:0071562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 28","termid":"PBO:0071562"}


id: GO:1903246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of adrenergic receptor signaling pathway involved in positive regulation of heart rate.","definition_xrefs":["GOC:rl","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:17242280"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:1903246)","synonyms":[{"name":"down regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"down regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"down-regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down-regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down-regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down-regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"down-regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down-regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down-regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"downregulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"downregulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"downregulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"downregulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"downregulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"downregulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"downregulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"negative regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"negative regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"negative regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"negative regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"negative regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"negative regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:1903246"}


id: FYPO:0007224
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is decreased in centromere outer repeat regions. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["GO:0031507","PomBase:mah","PMID:31822915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly at centromere outer repeat during vegetative growth","termid":"FYPO:0003098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased heterochromatin assembly at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased establishment of heterochromatin at centromere outer repeat","type":"exact"},{"name":"decreased heterochromatin assembly at centromere outer repeat at centromere otr during vegetative growth","type":"exact"},{"name":"decreased heterochromatin assembly at centromere outer repeat at centromeric outer repeat during vegetative growth","type":"exact"},{"name":"decreased heterochromatin assembly at centromere outer repeat at pericentric region during vegetative growth","type":"related"},{"name":"decreased heterochromatin assembly at centromere outer repeat at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased heterochromatin assembly at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin formation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced heterochromatin assembly at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007224"}


id: GO:0010624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:sl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell proliferation","termid":"GO:0060251"},{"relation_name":"regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell proliferation","termid":"GO:0010624"}


id: PR:000027499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A p38-like stress-activated mitogen-activated protein kinase that is a translation product of the yeast HOG1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA","PMID:10207620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase HOG1","pombase_gene_id":"SPAC24B11.06c","synonyms":[{"name":"HOG1","type":"exact"},{"name":"MAP kinase spc1","type":"exact"},{"name":"STY1","type":"related"}],"termid":"PR:000027499"}


id: GO:0043516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"regulates","term_name":"DNA damage response, signal transduction by p53 class mediator","termid":"GO:0030330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA damage response, signal transduction by p53 class mediator","synonyms":[{"name":"regulation of p53 induced by DNA damage response","type":"exact"}],"termid":"GO:0043516"}


id: PBO:0061993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily D member 2","termid":"PBO:0061993"}


id: GO:0050019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinitol + NAD+ = L-xylulose + H+ + NADH.","definition_xrefs":["RHEA:16381","EC:1.1.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-arabinitol 4-dehydrogenase activity","secondary_identifiers":["MetaCyc:L-ARABINITOL-4-DEHYDROGENASE-RXN","KEGG_REACTION:R01903"],"termid":"GO:0050019"}


id: PBO:0055152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2571","termid":"PBO:0055152"}


id: GO:0005853
data:
  {"annotated_genes":["SJAG_02493","SJAG_02180","SJAG_01851","SJAG_04157"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89635,89636,89637,108555,108556,108557,110890,114653,114654,114655],"is_not":false,"summary":null,"term":"GO:0005853"}]},"cv_name":"cellular_component","definition":"A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma.","definition_xrefs":["GOC:jl","PMID:10216950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01851":null,"SJAG_02180":null,"SJAG_02493":null,"SJAG_04157":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005853","terms_by_termid":{"GO:0005853":null}}


id: GO:1900595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-kotanin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"(+)-kotanin metabolic process","termid":"GO:1900594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(+)-kotanin catabolic process","synonyms":[{"name":"(+)-kotanin breakdown","type":"exact"},{"name":"(+)-kotanin catabolism","type":"exact"},{"name":"(+)-kotanin degradation","type":"exact"}],"termid":"GO:1900595"}


id: PBO:0000753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein Rad4","termid":"PBO:0000753"}


id: GO:0071203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that localizes at the surface of endosomes, where it recruits and activates the Arp2/3 complex to induce actin polymerization. In human, the WASH complex is composed of F-actin-capping protein subunits alpha and beta, WASH1, FAM21, KIAA1033, KIAA0196 and CCDC53.","definition_xrefs":["PMID:19922875","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"WASH complex","termid":"GO:0071203"}


id: FYPO:0002344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity phleomycin. Cells stop growing (and may die) at a concentration of phleomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to phleomycin","synonyms":[{"name":"hypersensitive to phleomycin","type":"exact"},{"name":"sensitive to phleomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to phleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0002344"}


id: PBO:0073653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIM bHLH transcription factor 1","termid":"PBO:0073653"}


id: PBO:0081775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705C, pseudogene","termid":"PBO:0081775"}


id: PBO:0062834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex non-catalytic subunit","termid":"PBO:0062834"}


id: PBO:0064655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA binding protein 1","termid":"PBO:0064655"}


id: PBO:0075032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-43","termid":"PBO:0075032"}


id: GO:0005154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an epidermal growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"epidermal growth factor receptor binding","secondary_identifiers":["GO:0008185"],"synonyms":[{"name":"EGF","type":"narrow"},{"name":"EGF receptor binding","type":"exact"},{"name":"EGF receptor ligand","type":"narrow"},{"name":"EGFR binding","type":"exact"},{"name":"TGF-alpha receptor binding","type":"exact"},{"name":"TGFalpha receptor binding","type":"exact"},{"name":"epidermal growth factor","type":"narrow"},{"name":"epidermal growth factor receptor ligand","type":"narrow"},{"name":"transforming growth factor alpha","type":"narrow"},{"name":"transforming growth factor alpha receptor binding","type":"exact"},{"name":"transforming growth factor alpha receptor ligand","type":"narrow"}],"termid":"GO:0005154"}


id: PBO:0054346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1739","termid":"PBO:0054346"}


id: PATO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which is equal to the energy transferred by a force to a moving object.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Work"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"work","synonyms":[{"name":"W","type":"exact"}],"termid":"PATO:0001026"}


id: FYPO:0004258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein tyrosine phosphorylation during cellular response to hydroxyurea (obsolete FYPO:0004258)","synonyms":[{"name":"decreased peptidyl-tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during cellular response to HU","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein tyrosine phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"decreased tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004258"}


id: GO:0034313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a diol, any alcohol containing two hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diol catabolic process","synonyms":[{"name":"dihydric alcohol catabolic process","type":"exact"},{"name":"diol breakdown","type":"exact"},{"name":"diol catabolism","type":"exact"},{"name":"diol degradation","type":"exact"}],"termid":"GO:0034313"}


id: PBO:0027390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutathione_disulfide_oxidoreductase_activity","termid":"PBO:0027390"}


id: GO:0004286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of protein hormones and neuropeptides from their precursors, generally by cleavage of -Lys-Arg-Xaa at the Arg-Xaa bond.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proprotein convertase 2 activity (obsolete GO:0004286)","synonyms":[{"name":"NEC 2 activity","type":"narrow"},{"name":"PC2 activity","type":"narrow"},{"name":"neuroendocrine convertase 2 activity","type":"narrow"},{"name":"prohormone convertase II activity","type":"narrow"},{"name":"proprotein convertase 2 activity","type":"exact"}],"termid":"GO:0004286"}


id: GO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. High molecular weight (100-300 kDa) proteins that associate with intermediate filaments to cross-link them into loose networks.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete type II intermediate filament associated protein (obsolete GO:0001723)","synonyms":[{"name":"type II intermediate filament associated protein","type":"exact"}],"termid":"GO:0001723"}


id: PBO:0112874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 specific peptidase 1","termid":"PBO:0112874"}


id: PBO:0057494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 612","termid":"PBO:0057494"}


id: PBO:0060067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 14","termid":"PBO:0060067"}


id: SO:0001440
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codon TGG.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan","synonyms":[{"name":"Trp","type":"exact"},{"name":"W","type":"exact"}],"termid":"SO:0001440"}


id: GO:0015697
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"}]},"cv_name":"biological_process","definition":"The directed movement into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore of quaternary ammonium compounds, any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"quaternary ammonium group transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015845"],"synonyms":[{"name":"quaternary amine transport","type":"exact"},{"name":"quaternary ammonium compound transport","type":"exact"}],"termid":"GO:0015697","terms_by_termid":{"GO:1990545":null}}


id: PBO:0029223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_trichostatin_A","termid":"PBO:0029223"}


id: PR:O42910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 7, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.03c","synonyms":[{"name":"Spom972h-ppr7","type":"exact"}],"termid":"PR:O42910"}


id: PBO:0057961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3682","termid":"PBO:0057961"}


id: GO:1900654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of demethylkotanin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of demethylkotanin biosynthetic process","termid":"GO:1900652"},{"relation_name":"positively_regulates","term_name":"demethylkotanin biosynthetic process","termid":"GO:1900599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of demethylkotanin biosynthetic process","synonyms":[{"name":"activation of demethylkotanin anabolism","type":"exact"},{"name":"activation of demethylkotanin biosynthesis","type":"exact"},{"name":"activation of demethylkotanin biosynthetic process","type":"narrow"},{"name":"activation of demethylkotanin formation","type":"exact"},{"name":"activation of demethylkotanin synthesis","type":"exact"},{"name":"positive regulation of demethylkotanin anabolism","type":"exact"},{"name":"positive regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"positive regulation of demethylkotanin formation","type":"exact"},{"name":"positive regulation of demethylkotanin synthesis","type":"exact"},{"name":"up regulation of demethylkotanin anabolism","type":"exact"},{"name":"up regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"up regulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"up regulation of demethylkotanin formation","type":"exact"},{"name":"up regulation of demethylkotanin synthesis","type":"exact"},{"name":"up-regulation of demethylkotanin anabolism","type":"exact"},{"name":"up-regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"up-regulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"up-regulation of demethylkotanin formation","type":"exact"},{"name":"up-regulation of demethylkotanin synthesis","type":"exact"},{"name":"upregulation of demethylkotanin anabolism","type":"exact"},{"name":"upregulation of demethylkotanin biosynthesis","type":"exact"},{"name":"upregulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"upregulation of demethylkotanin formation","type":"exact"},{"name":"upregulation of demethylkotanin synthesis","type":"exact"}],"termid":"GO:1900654"}


id: GO:0097237
data:
  {"annotated_genes":["SJAG_04242","SJAG_00365","SJAG_04125","SJAG_04726","SJAG_02106","SJAG_04674","SJAG_01344","SJAG_04404","SJAG_01995","SJAG_01199","SJAG_00668","SJAG_04608","SJAG_03476","SJAG_05181","SJAG_00141","SJAG_04063","SJAG_03797","SJAG_01734","SJAG_01973","SJAG_03108","SJAG_02276","SJAG_03316","SJAG_04403","SJAG_03288","SJAG_02973","SJAG_04516","SJAG_01457","SJAG_03303","SJAG_00903","SJAG_03494","SJAG_04823","SJAG_01612","SJAG_00489","SJAG_01628","SJAG_01216","SJAG_00179","SJAG_02515","SJAG_03166","SJAG_00988","SJAG_02960","SJAG_04788","SJAG_04632","SJAG_06611","SJAG_03623","SJAG_01651","SJAG_02247","SJAG_01351","SJAG_00270","SJAG_02630","SJAG_03653","SJAG_01596","SJAG_04953","SJAG_02010","SJAG_00219","SJAG_00614","SJAG_01162","SJAG_02907","SJAG_03497","SJAG_02988","SJAG_05256","SJAG_01404","SJAG_04399","SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109629,89154,114926,94453,84108,90998,95098,95931,109667,112298,98901,84007,89153,93175,109178,90722,96412,108447,114358,99739,96141,102723,97896,110763,90727,98974,88468,84011,86143,114782,95287,110866,91068,104854],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990748"},{"annotations":[108890],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[104569,93440,114384,89340,93123,93085],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[96909,109906],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"},{"annotations":[96088,104970,114471,101161,113553,91246],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[101164],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[83444,98321],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070458"},{"annotations":[102918,67796,91247,57331,63042,57330,101342,64699,101427,64698,67794,102500,67233,67795],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098869"},{"annotations":[99593,91591],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[67531,95359,106281,96246,58046,89164,64533,85015,85435,106237],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00179":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00365":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00668":null,"SJAG_00903":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_01404":null,"SJAG_01457":null,"SJAG_01596":null,"SJAG_01612":null,"SJAG_01628":null,"SJAG_01651":null,"SJAG_01734":null,"SJAG_01973":null,"SJAG_01995":null,"SJAG_02010":null,"SJAG_02106":null,"SJAG_02247":null,"SJAG_02276":null,"SJAG_02515":null,"SJAG_02599":null,"SJAG_02630":null,"SJAG_02907":null,"SJAG_02960":null,"SJAG_02973":null,"SJAG_02988":null,"SJAG_03108":null,"SJAG_03166":null,"SJAG_03288":null,"SJAG_03303":null,"SJAG_03316":null,"SJAG_03476":null,"SJAG_03494":null,"SJAG_03497":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_03797":null,"SJAG_04063":null,"SJAG_04125":null,"SJAG_04242":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04404":null,"SJAG_04516":null,"SJAG_04608":null,"SJAG_04632":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to toxic substance","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0097237","terms_by_termid":{"GO:0019430":null,"GO:0046294":null,"GO:0061692":null,"GO:0070458":null,"GO:0098849":null,"GO:0098869":null,"GO:0110095":null,"GO:0140041":null,"GO:0140114":null,"GO:1990748":null}}


id: PBO:0090726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L24","termid":"PBO:0090726"}


id: FYPO:0005268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to methyl methanesulfonate (MMS) is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to MMS. The most common abnormality is for the cell cycle to progress as in the absence of MMS.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle delay following methyl methanesulfonate exposure","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to MMS","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulphonate","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005268"}


id: PBO:0079726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 2 (pseudogene)","termid":"PBO:0079726"}


id: PBO:0089271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit D","termid":"PBO:0089271"}


id: PBO:0034093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_Ib_bouton","termid":"PBO:0034093"}


id: PBO:0082907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine aminopeptidase with homocysteine-thiolactonase activity; protects cells against homocysteine toxicity; cytosolic protein, selectively transported to vacuole during nitrogen starvation; has bleomycin hydrolase activity in vitro; transcription is regulated by galactose via Gal4p; orthologous to human BLMH","termid":"PBO:0082907"}


id: PBO:0071037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 39","termid":"PBO:0071037"}


id: PBO:0038657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 7, tartrate resistant (putative)","termid":"PBO:0038657"}


id: GO:0000934
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septum or cross wall which does not entirely span the space between two portions of cell wall and may contain a specialized central pore structure. A porous septum allows the movement of organelles and/or cytoplasm between compartments.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell septum","termid":"GO:0030428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"porous cell septum","synonyms":[{"name":"porous septum","type":"broad"}],"termid":"GO:0000934"}


id: PBO:0029097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cysteine_synthase_activity","termid":"PBO:0029097"}


id: GO:0044396
data:
  {"annotated_genes":["SJAG_04982","SJAG_01268","SJAG_03044","SJAG_04886","SJAG_04465","SJAG_02228","SJAG_01964","SJAG_01384","SJAG_03088","SJAG_02075","SJAG_03086","SJAG_04001","SJAG_03119","SJAG_04100","SJAG_02511","SJAG_04052","SJAG_02245","SJAG_02177","SJAG_01894","SJAG_03146","SJAG_04887","SJAG_02700","SJAG_01732","SJAG_04644","SJAG_00521","SJAG_00649"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84290,91338,93794,94916,94979,101264,101282],"is_not":false,"summary":null,"term":"GO:0044396"},{"annotations":[84185,85858,115039,86704,93993,99178,108346,95770,99423,107824,108323,95949,111049,99367,107169,90841,103292,114678,101281,106837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000147"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level and results in the assembly, arrangement of constituent parts, or disassembly of an actin cortical patch, a discrete actin-containing structure found at the plasma membrane in cells, at sites of endocytosis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton organization","termid":"GO:0030866"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00521":null,"SJAG_00649":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01894":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02177":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02511":null,"SJAG_02700":null,"SJAG_03044":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03146":null,"SJAG_04001":null,"SJAG_04052":null,"SJAG_04100":null,"SJAG_04465":null,"SJAG_04644":null,"SJAG_04886":null,"SJAG_04887":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"actin cortical patch organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin cortical patch organisation","type":"exact"}],"termid":"GO:0044396","terms_by_termid":{"GO:0000147":null,"GO:0044396":null}}


id: GO:0140042
data:
  {"annotated_genes":["SJAG_01537","SJAG_04059","SJAG_01180","SJAG_02980","SJAG_03609","SJAG_04049","SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84802,90697,92778,107137,108219,110354,115062],"is_not":false,"summary":null,"term":"GO:0140042"}]},"cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts of a lipid droplet.","definition_xrefs":["PMID:28011631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet organization","termid":"GO:0034389"},{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"},{"relation_name":"part_of","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01537":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"lipid droplet formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adiposome formation","type":"exact"},{"name":"lipid body formation","type":"exact"},{"name":"lipid particle formation","type":"exact"}],"termid":"GO:0140042","terms_by_termid":{"GO:0140042":null}}


id: GO:0103047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methyl beta-D-glucoside 6-phosphate + H2O = beta-D-glucose 6-phosphate + methanol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methyl beta-D-glucoside 6-phosphate glucohydrolase activity (obsolete GO:0103047)","termid":"GO:0103047"}


id: PBO:0108511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 and Rpd3L histone deacetylase complex subunit Sds3","termid":"PBO:0108511"}


id: FYPO:0000813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which plasma membrane organization is abnormal. Plasma membrane organization results in the assembly, arrangement of constituent parts, or disassembly of the plasma membrane.","definition_xrefs":["PomBase:mah","GO:0007009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"},{"relation_name":"is_a","term_name":"abnormal membrane organization during vegetative growth","termid":"FYPO:0001351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal plasma membrane organization","synonyms":[{"name":"abnormal plasma membrane organisation","type":"exact"},{"name":"abnormal plasma membrane organization during mitotic cell cycle","type":"related"},{"name":"abnormal plasma membrane organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000813"}


id: PR:Q9UU84
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug170 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 170 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.03","synonyms":[{"name":"Spom972h-mug170","type":"exact"}],"termid":"PR:Q9UU84"}


id: GO:0102733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: typhasterol + O2 + a reduced electron acceptor = castasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:17138693","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"typhasterol C-23 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-719"],"termid":"GO:0102733"}


id: FYPO:0006517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions during G0 phase. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah","PMID:29167439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere structure","termid":"FYPO:0006514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere structure during G0","synonyms":[{"name":"normal chromosome structure at telomere during G0","type":"exact"},{"name":"normal chromosome structure at telomeric region during G0","type":"exact"},{"name":"normal telomere structure during cell quiescence","type":"exact"},{"name":"normal telomere structure during quiescence","type":"exact"},{"name":"normal telomeric region structure during G0","type":"exact"}],"termid":"FYPO:0006517"}


id: GO:0001921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor recycling","termid":"GO:0001919"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"positively_regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor recycling","synonyms":[{"name":"activation of receptor recycling","type":"narrow"},{"name":"stimulation of receptor recycling","type":"narrow"},{"name":"up regulation of receptor recycling","type":"exact"},{"name":"up-regulation of receptor recycling","type":"exact"},{"name":"upregulation of receptor recycling","type":"exact"}],"termid":"GO:0001921"}


id: PBO:0086789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; predicted to be palmitoylated","termid":"PBO:0086789"}


id: GO:0006015
data:
  {"annotated_genes":["SJAG_04882","SJAG_03811","SJAG_04970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93784,106063,111125],"is_not":false,"summary":null,"term":"GO:0006015"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 5-phosphoribose 1-diphosphate, also known as 5-phosphoribosyl-1-pyrophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribose phosphate biosynthetic process","termid":"GO:0046390"},{"relation_name":"is_a","term_name":"5-phosphoribose 1-diphosphate metabolic process","termid":"GO:0046391"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null,"SJAG_04970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"5-phosphoribose 1-diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5-phosphoribose 1-diphosphate anabolism","type":"exact"},{"name":"5-phosphoribose 1-diphosphate biosynthesis","type":"exact"},{"name":"5-phosphoribose 1-diphosphate formation","type":"exact"},{"name":"5-phosphoribose 1-diphosphate synthesis","type":"exact"},{"name":"5-phosphoribosyl-1-pyrophosphate biosynthesis","type":"exact"},{"name":"5-phosphoribosyl-1-pyrophosphate biosynthetic process","type":"exact"},{"name":"PRPP biosynthetic process","type":"exact"}],"termid":"GO:0006015","terms_by_termid":{"GO:0006015":null}}


id: GO:0047872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + dolichol = CoA + dolichyl palmitate.","definition_xrefs":["EC:2.3.1.123","MetaCyc:DOLICHOL-O-ACYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"dolichol O-acyltransferase activity","secondary_identifiers":["RHEA:16685"],"synonyms":[{"name":"acyl-CoA:dolichol acyltransferase activity","type":"related"},{"name":"palmitoyl-CoA:dolichol O-palmitoyltransferase activity","type":"related"}],"termid":"GO:0047872"}


id: GO:0036426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,octacis-undecaprenyl phosphate + GDP-alpha-D-mannose = D-mannosyl undecaprenyl phosphate+ GDP.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undecaprenyl-phosphate mannosyltransferase activity","termid":"GO:0047267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"ditrans, polycis-undecaprenyl-phosphate mannosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07257","MetaCyc:2.4.1.54-RXN"],"termid":"GO:0036426"}


id: GO:0050193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylulose 5-phosphate + phosphate = acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O.","definition_xrefs":["EC:4.1.2.9","MetaCyc:PHOSPHOKETOLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoketolase activity","secondary_identifiers":["RHEA:10468"],"synonyms":[{"name":"D-xylulose-5-phosphate D-glyceraldehyde-3-phosphate-lyase (adding phosphate; acetyl-phosphate-forming)","type":"related"},{"name":"D-xylulose-5-phosphate D-glyceraldehyde-3-phosphate-lyase (phosphate-acetylating) activity","type":"related"},{"name":"xylulose-5-phosphate phosphoketolase activity","type":"related"}],"termid":"GO:0050193"}


id: GO:0102029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + an ubiquinone = pyruvate + an ubiquinol.","definition_xrefs":["RHEA:51468","GOC:pz","PMID:10944213","PMID:4575624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-lactate dehydrogenase (quinone) activity","secondary_identifiers":["EC:1.1.5.12","MetaCyc:DLACTDEHYDROGFAD-RXN"],"termid":"GO:0102029"}


id: PBO:0109081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3105","termid":"PBO:0109081"}


id: PBO:0085681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteasomal and 40S ribosomal subunit biogenesis; required for cleavage of the 20S pre-rRNA to generate the mature 18S rRNA; cleavage is activated by Fun12p, a GTPase and translation initiation factor; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0085681"}


id: GO:0048906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an anterior lateral line neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.","definition_xrefs":["ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast support cell differentiation","termid":"GO:0048889"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast support cell differentiation","termid":"GO:0048906"}


id: GO:0019319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"hexose biosynthetic process","synonyms":[{"name":"hexose anabolism","type":"exact"},{"name":"hexose biosynthesis","type":"exact"},{"name":"hexose formation","type":"exact"},{"name":"hexose synthesis","type":"exact"}],"termid":"GO:0019319"}


id: PBO:0073867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 3","termid":"PBO:0073867"}


id: PBO:0061463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 0 group B member 1","termid":"PBO:0061463"}


id: GO:1904002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sebum secreting cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:16901790","GOC:hjd","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"sebum secreting cell proliferation","termid":"GO:1990654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sebum secreting cell proliferation","synonyms":[{"name":"regulation of sebocyte proliferation","type":"related"}],"termid":"GO:1904002"}


id: PBO:0001098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-copy suppressor of Chk1","termid":"PBO:0001098"}


id: GO:0016610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase is tetrameric with an alpha2-beta2 structure and nitrogenase reductase is a homodimer, and both are associated with metal ions, which differ between species. Both proteins are required for the enzyme activity of the complex, the formation of oxidized ferredoxin and ammonia from reduced ferredoxin and nitrogen.","definition_xrefs":["PMID:10852721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nitrogenase complex","termid":"GO:0016610"}


id: PBO:0087868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator that enhances pseudohyphal growth; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; regulates expression of FLO11, an adhesin required for pseudohyphal filament formation; similar to StuA, an A. nidulans developmental regulator; potential Cdc28p substrate; PHD1 has a paralog, SOK2, that arose from the whole genome duplication","termid":"PBO:0087868"}


id: PBO:0056974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 27b","termid":"PBO:0056974"}


id: PBO:0048686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioblastoma down-regulated RNA","termid":"PBO:0048686"}


id: GO:0045809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of competence for transformation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of competence for transformation","termid":"GO:0045304"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"establishment of competence for transformation","termid":"GO:0030420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of competence for transformation","synonyms":[{"name":"activation of establishment of competence for transformation","type":"narrow"},{"name":"activator of the establishment of competence for transformation activity","type":"related"},{"name":"stimulation of establishment of competence for transformation","type":"narrow"},{"name":"up regulation of establishment of competence for transformation","type":"exact"},{"name":"up-regulation of establishment of competence for transformation","type":"exact"},{"name":"upregulation of establishment of competence for transformation","type":"exact"}],"termid":"GO:0045809"}


id: FYPO:0000154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the G0 to G1 transition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal negative regulation of G0 to G1 transition","synonyms":[{"name":"abnormal maintenance of G0 arrest","type":"exact"},{"name":"abnormal maintenance of G0 phase","type":"exact"},{"name":"abnormal maintenance of cell cycle quiescence","type":"exact"},{"name":"abnormal maintenance of cell quiescence","type":"exact"}],"termid":"FYPO:0000154"}


id: GO:0005506
data:
  {"annotated_genes":["SJAG_03658","SJAG_00792","SJAG_04743","SJAG_04054","SJAG_00717","SJAG_00827","SJAG_04016","SJAG_03225","SJAG_00532","SJAG_00309","SJAG_03222","SJAG_03862","SJAG_05311","SJAG_01418","SJAG_00221","SJAG_03943","SJAG_03018","SJAG_04913","SJAG_03509","SJAG_00642","SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85695,87832,90110,94935,97627,99515,99913,100887,103515,103669,106009,107872,108591,108698,108958,110571,113546],"is_not":false,"summary":null,"term":"GO:0005506"},{"annotations":[110047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008199"},{"annotations":[97315,110048,96664,100863,88993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008198"}]},"cv_name":"molecular_function","definition":"Binding to an iron (Fe) ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00309":null,"SJAG_00532":null,"SJAG_00642":null,"SJAG_00717":null,"SJAG_00792":null,"SJAG_00827":null,"SJAG_01418":null,"SJAG_03018":null,"SJAG_03222":null,"SJAG_03225":null,"SJAG_03509":null,"SJAG_03658":null,"SJAG_03862":null,"SJAG_03943":null,"SJAG_04016":null,"SJAG_04054":null,"SJAG_04297":null,"SJAG_04743":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"iron ion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"iron binding","type":"exact"}],"termid":"GO:0005506","terms_by_termid":{"GO:0005506":null,"GO:0008198":null,"GO:0008199":null}}


id: PBO:0002644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 h4.1","termid":"PBO:0002644"}


id: GO:0080095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylethanolamine + a sterol = a sterol ester + a lysophosphatidylethanolamine.","definition_xrefs":["PMID:16020547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"phosphatidylethanolamine-sterol O-acyltransferase activity","termid":"GO:0080095"}


id: GO:0060173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. Examples include legs, arms or some types of fin.","definition_xrefs":["GOC:dgh","GOC:dph","PMID:11487378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb development","secondary_identifiers":["Wikipedia:Limb_development"],"synonyms":[{"name":"limb bud development","type":"narrow"},{"name":"paired limb/fin development","type":"exact"}],"termid":"GO:0060173"}


id: GO:0050382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + uracil 5-carboxylate = CO2 + uracil.","definition_xrefs":["RHEA:17685","EC:4.1.1.66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"uracil-5-carboxylate decarboxylase activity","secondary_identifiers":["MetaCyc:URACIL-5-CARBOXYLATE-DECARBOXYLASE-RXN","KEGG_REACTION:R00973"],"synonyms":[{"name":"uracil-5-carboxylate carboxy-lyase (uracil-forming)","type":"related"},{"name":"uracil-5-carboxylate carboxy-lyase activity","type":"related"},{"name":"uracil-5-carboxylic acid decarboxylase activity","type":"related"}],"termid":"GO:0050382"}


id: PBO:0078599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 12, Y-linked","termid":"PBO:0078599"}


id: GO:1900327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mannotriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"mannotriose transport","termid":"GO:2001095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of mannotriose transport","termid":"GO:1900327"}


id: PBO:0030080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_lysine_import_during_nitrogen_starvation","termid":"PBO:0030080"}


id: PBO:0055036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2451","termid":"PBO:0055036"}


id: PBO:0075754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi repeat containing protein X-linked","termid":"PBO:0075754"}


id: GO:2000186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phosphate transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inorganic anion transmembrane transport","termid":"GO:1903796"},{"relation_name":"is_a","term_name":"regulation of phosphate transmembrane transport","termid":"GO:2000185"},{"relation_name":"negatively_regulates","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of phosphate transmembrane transport","synonyms":[{"name":"negative regulation of phosphate membrane transport","type":"exact"}],"termid":"GO:2000186"}


id: PBO:0077282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 25","termid":"PBO:0077282"}


id: PBO:0083941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyl cyclotransferase; cleaves the gamma-glutamyl bond of glutathione to yield 5-oxoproline and a Cys-Gly dipeptide; similar to mammalian pro-apoptotic protein ChaC1; expression of mouse ChaC1 in yeast increases apoptosis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; periodically expressed during the metabolic cycle","termid":"PBO:0083941"}


id: GO:1903768
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of taste receptor activity.","definition_xrefs":["GOC:rl","GO_REF:0000088","GOC:TermGenie","GOC:BHF","PMID:16720576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"taste receptor complex","termid":"GO:1903768"}


id: GO:0047750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-alpha-cholest-7-en-3-beta-ol = 5-alpha-cholest-8-en-3-beta-ol.","definition_xrefs":["RHEA:15281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"cholestenol delta-isomerase activity","secondary_identifiers":["EC:5.3.3.5","MetaCyc:RXN66-25"],"synonyms":[{"name":"cholestenol D-isomerase activity","type":"exact"},{"name":"delta7-cholestenol delta7-delta8-isomerase activity","type":"related"}],"termid":"GO:0047750"}


id: _global:has_input
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_input","secondary_identifiers":["GOREL:0000503","_global:has_target","_global:localizes","RO:0002233","GOREL:0000016","GOREL:0000753"],"synonyms":[{"name":"has_target","type":"exact"},{"name":"localizes","type":"narrow"}],"termid":"_global:has_input"}


id: GO:0002709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell mediated immunity","synonyms":[{"name":"regulation of T lymphocyte mediated immunity","type":"exact"},{"name":"regulation of T-cell mediated immunity","type":"exact"},{"name":"regulation of T-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002709"}


id: GO:1904442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thyroid gland epithelial cell proliferation.","definition_xrefs":["PMID:17646383","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of thyroid gland epithelial cell proliferation","termid":"GO:1904441"},{"relation_name":"negatively_regulates","term_name":"thyroid gland epithelial cell proliferation","termid":"GO:1990789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thyroid gland epithelial cell proliferation","synonyms":[{"name":"down regulation of Hurthle cell proliferation","type":"narrow"},{"name":"down regulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"down regulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"down-regulation of Hurthle cell proliferation","type":"narrow"},{"name":"down-regulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"down-regulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"downregulation of Hurthle cell proliferation","type":"narrow"},{"name":"downregulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"downregulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"inhibition of Hurthle cell proliferation","type":"narrow"},{"name":"inhibition of thyroid follicular cell proliferation","type":"narrow"},{"name":"inhibition of thyroid gland epithelial cell proliferation","type":"narrow"},{"name":"negative regulation of Hurthle cell proliferation","type":"narrow"},{"name":"negative regulation of thyroid follicular cell proliferation","type":"narrow"}],"termid":"GO:1904442"}


id: FYPO:0002419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and do not divide before dying.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, without cell division (obsolete FYPO:0002419)","synonyms":[{"name":"inviable germinated spore population, without cell division","type":"exact"},{"name":"inviable population of undivided germinated spores","type":"exact"}],"termid":"FYPO:0002419"}


id: FYPO:0003160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is in a culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"elongated cell during stationary phase","synonyms":[{"name":"long cell during stationary phase","type":"exact"}],"termid":"FYPO:0003160"}


id: PBO:0041912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene like 2","termid":"PBO:0041912"}


id: MOD:01801
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to an L-serinium (protonated L-serine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-serine (L-serinium) residue","termid":"MOD:01801"}


id: PBO:0046232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 26","termid":"PBO:0046232"}


id: PATO:0000688
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's not occurring or existing at the same time or having the same period or phase.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous","termid":"PATO:0000688"}


id: PBO:0003789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptide-transporting ATPase","termid":"PBO:0003789"}


id: PR:O74337
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1A4.04 gene.","definition_xrefs":["UniProtKB:O74337","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.04","synonyms":[{"name":"Spom972h-SPBC1A4.04","type":"exact"}],"termid":"PR:O74337"}


id: GO:0005514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium ion storage activity (obsolete GO:0005514)","synonyms":[{"name":"calcium ion storage activity","type":"exact"}],"termid":"GO:0005514"}


id: GO:0072282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric nephron tubule are generated and organized. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"is_a","term_name":"metanephric tubule morphogenesis","termid":"GO:0072173"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}


id: FYPO:0002508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"},{"relation_name":"is_a","term_name":"decreased protein palmitoylation","termid":"FYPO:0002505"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein palmitoylation during vegetative growth","synonyms":[{"name":"decreased protein palmitoylation during mitotic cell cycle","type":"related"},{"name":"reduced protein palmitoylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002508"}


id: PR:Q9HDV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine cleavage system H protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03446","PANTHER:PTHR11715:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage system H protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.01","secondary_identifiers":["UniProtKB:Q9HDV9"],"synonyms":[{"name":"Spom972h-GCSH","type":"exact"},{"name":"glycine decarboxylase complex subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV9"}


id: SO:0000969
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000969 rolling_circle (obsolete SO:0000969)","secondary_identifiers":["http://en.wikipedia.org/wiki/Rolling_circle"],"synonyms":[{"name":"rolling circle","type":"exact"}],"termid":"SO:0000969"}


id: GO:0044591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of amylopectin stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amylopectin","termid":"GO:0044591"}


id: PBO:0077537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 249","termid":"PBO:0077537"}


id: SO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the reduction of a the 3' UTR with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3_prime_UTR_variant","termid":"SO:0001624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3_prime_UTR_truncation","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"3 prime UTR truncation","type":"exact"},{"name":"Jannovar:3_prime_utr_truncation","type":"exact"},{"name":"snpEff:UTR_3_DELETED","type":"exact"}],"termid":"SO:0002015"}


id: PBO:0068696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 77, pseudogene","termid":"PBO:0068696"}


id: PBO:0113174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Invertase; sucrose hydrolyzing enzyme; seven closely related but non-identical invertase genes have been described in yeast (SUC1-5, 7, 8) but only SUC2 is in the reference strain (S288C); mapped to 228.0 cM on chrVII","termid":"PBO:0113174"}


id: PBO:0055352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2781","termid":"PBO:0055352"}


id: FYPO:0001732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"},{"relation_name":"is_a","term_name":"decreased cellular glutamine level","termid":"FYPO:0001727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased vacuolar glutamine level","synonyms":[{"name":"decreased level of glutamine in vacuole","type":"exact"},{"name":"decreased vacuolar L-glutamine level","type":"exact"},{"name":"decreased vacuolar glutamine level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar glutamine level during vegetative growth","type":"exact"},{"name":"reduced level of glutamine in vacuole","type":"exact"},{"name":"reduced vacuolar glutamine level","type":"exact"}],"termid":"FYPO:0001732"}


id: GO:0051778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ent-7-alpha-hydroxykaurenoate + NADPH + H+ + O2 = gibberellin 12-aldehyde + NADP+ + 2 H2O. This is the second of three successive reactions resulting in the oxidation of ent-kaurenoate (ent-kaurenoic acid) to gibberellin 12 (GA12).","definition_xrefs":["MetaCyc:RXN1F-160","EC:1.14.13.79"],"gene_count":0,"genotype_count":0,"name":"obsolete ent-7-alpha-hydroxykaurenoate oxidase activity (obsolete GO:0051778)","termid":"GO:0051778"}


id: PR:O94326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pir2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C725.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.08","synonyms":[{"name":"Spom972h-pir2","type":"exact"}],"termid":"PR:O94326"}


id: GO:0035037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that results in penetration of the egg shell through the micropyle (a specialized anterior opening in the vitelline envelope) and entry of the entire sperm, including the surrounding plasma membrane and the sperm tail, into the egg cytoplasm. This step in fertilization is seen in Drosophila, where a plasma membrane fusion event between the sperm and the egg does not occur.","definition_xrefs":["GOC:bf","PMID:9630751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"sperm entry","termid":"GO:0035037"}


id: PBO:0064101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIWIL2 divergent transcript","termid":"PBO:0064101"}


id: PBO:0045739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBF transcription factor 2","termid":"PBO:0045739"}


id: RO:0002610
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two entities, where the entities exhibit a statistical dependence relationship. The entities may be statistical variables, or they may be other kinds of entities such as diseases, chemical entities or processes.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_dependence_to","termid":"RO:0002609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"correlated_with","termid":"RO:0002610"}


id: FYPO:0006318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the extent of DNA resection upstream of a stalled replication fork is lower than normal. DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PMID:29215009","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased DNA resection during replication fork processing","synonyms":[{"name":"decreased DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"decreased DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"decreased DNA resectioning during replication fork processing","type":"exact"},{"name":"decreased extent of DNA resection during replication fork processing","type":"exact"},{"name":"decreased extent of exonucleolytic DNA cleavage during replication fork processing","type":"exact"},{"name":"reduced DNA resection during replication fork processing","type":"exact"}],"termid":"FYPO:0006318"}


id: PR:O74875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC330.03c gene.","definition_xrefs":["UniProtKB:O74875","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized heme-binding protein C330.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.03c","synonyms":[{"name":"Spom972h-SPCC330.03c","type":"exact"}],"termid":"PR:O74875"}


id: GO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates the transition from the initiation to the elongation phases of transcription by RNA polymerase II, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase and making contacts with elongation specific factors.","definition_xrefs":["GOC:txnOH","PMID:15020047","PMID:31628251","PMID:22982364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter clearance during DNA-templated transcription","termid":"GO:0001109"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"RNA polymerase II promoter clearance","synonyms":[{"name":"promoter clearance from RNA polymerase II promoter","type":"exact"},{"name":"promoter escape from RNA polymerase II promoter","type":"exact"},{"name":"promoter-paused RNA polymerase II release","type":"exact"}],"termid":"GO:0001111"}


id: GO:0044248
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id: GO:0048545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to steroid hormone","synonyms":[{"name":"response to steroid hormone stimulus","type":"exact"}],"termid":"GO:0048545"}


id: PBO:0057713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1299","termid":"PBO:0057713"}


id: GO:0048533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized floral cell acquires the specialized features of a sporocyte. Sporocytes are the haploid spores of angiosperms. Once formed, they undergo meiotic divisions to form microspores and megaspores.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocyte differentiation","synonyms":[{"name":"sporocyte development","type":"narrow"},{"name":"sporocyte morphogenesis","type":"related"}],"termid":"GO:0048533"}


id: PBO:0088320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DDHD family phospholipase","termid":"PBO:0088320"}


id: PBO:0043303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 20A","termid":"PBO:0043303"}


id: GO:1905825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of selenocysteine metabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:19716792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"regulates","term_name":"selenocysteine metabolic process","termid":"GO:0016259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of selenocysteine metabolic process","synonyms":[{"name":"regulation of selenocysteine metabolism","type":"exact"}],"termid":"GO:1905825"}


id: PBO:0028644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028644"}


id: GO:0052586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a quinone or similar compound.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on other nitrogenous compounds as donors, with a quinone or similar compound as acceptor (obsolete GO:0052586)","termid":"GO:0052586"}


id: SO:0001493
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A centromere DNA Element I (CDEI) is a conserved region, part of the centromere, consisting of a consensus region composed of 8-11bp which enables binding by the centromere binding factor 1(Cbf1p).","definition_xrefs":["PMID:11222754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"point_centromere","termid":"SO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere_DNA_Element_I","synonyms":[{"name":"CDEI","type":"exact"},{"name":"Centromere DNA Element I","type":"exact"}],"termid":"SO:0001493"}


id: GO:0006463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a steroid hormone receptor complex, an intracellular receptor that binds steroid hormones. The complex is often a dimer, and forms after the steroid has bound the receptor.","definition_xrefs":["Wikipedia:Steroid_hormone_receptor","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"steroid hormone receptor complex assembly","termid":"GO:0006463"}


id: PBO:0050831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia up-regulated 1","termid":"PBO:0050831"}


id: GO:2000632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pre-microRNA processing.","definition_xrefs":["GOC:sl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of miRNA processing","termid":"GO:1903799"},{"relation_name":"is_a","term_name":"regulation of pre-miRNA processing","termid":"GO:2000631"},{"relation_name":"negatively_regulates","term_name":"pre-miRNA processing","termid":"GO:0031054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pre-miRNA processing","synonyms":[{"name":"negative regulation of miRNA maturation","type":"exact"},{"name":"negative regulation of pre-microRNA processing","type":"exact"}],"termid":"GO:2000632"}


id: PBO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor beta","termid":"PBO:0047760"}


id: FYPO:0008164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is abnormal during mitotic M-phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}


id: PBO:0078678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 11-1","termid":"PBO:0078678"}


id: GO:0018518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6-dihydroxy-3-methyl-5,6-dihydroquinolin-2(1H)-one + NAD+ = 5,6-dihydroxy-3-methyl-2-oxo-1,2-dihydroquinoline + H+ + NADH.","definition_xrefs":["EC:1.3.1.65","RHEA:24556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"5,6-dihydroxy-3-methyl-2-oxo-1,2,5,6-tetrahydroquinoline dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0053","MetaCyc:RXN-643","KEGG_REACTION:R05312"],"synonyms":[{"name":"5,6-dihydrodiol-3-methyl-2-oxo-1,2-dihydroquinoline dehydrogenase","type":"related"},{"name":"5,6-dihydroxy-3-methyl-2-oxo-1,2,5,6-tetrahydroquinoline:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018518"}


id: PBO:0086053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP fusion protein localizes to the endoplasmic reticulum (ER) and extracellular region, while mCherry fusion protein localizes to the ER and vacuole; mRNA identified as translated by ribosome profiling data; CSS2 is a non-essential gene","termid":"PBO:0086053"}


id: PBO:0081486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 382","termid":"PBO:0081486"}


id: PBO:0050871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NADP(+)) 2","termid":"PBO:0050871"}


id: GO:0015970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"guanosine tetraphosphate metabolic process","termid":"GO:0015969"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate biosynthetic process","termid":"GO:0034036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"guanosine tetraphosphate biosynthetic process","synonyms":[{"name":"guanosine tetraphosphate (5'-ppGpp-3') biosynthesis","type":"exact"},{"name":"guanosine tetraphosphate (5'-ppGpp-3') biosynthetic process","type":"exact"},{"name":"guanosine tetraphosphate anabolism","type":"exact"},{"name":"guanosine tetraphosphate biosynthesis","type":"exact"},{"name":"guanosine tetraphosphate formation","type":"exact"},{"name":"guanosine tetraphosphate synthesis","type":"exact"}],"termid":"GO:0015970"}


id: GO:0071206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to the juxtaparanode region of an axon.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization","termid":"GO:0045184"},{"relation_name":"is_a","term_name":"protein localization to juxtaparanode region of axon","termid":"GO:0071205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to juxtaparanode region of axon","synonyms":[{"name":"establishment of protein localisation to juxtaparanode region of axon","type":"exact"}],"termid":"GO:0071206"}


id: PBO:0026713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_translation_in_response_to_UV","termid":"PBO:0026713"}


id: PBO:0086064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that influences nuclear pore distribution; co-purifies with ribosomes; contains a GYF domain, which bind proline-rich sequences; deletion extends chronological lifespan; SYH1 has a paralog, SMY2, that arose from the whole genome duplication","termid":"PBO:0086064"}


id: PBO:0082636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of GID Complex that confers ubiquitin ligase (U3) activity; necessary for polyubiquitination and degradation of the gluconeogenic enzyme fructose-1,6-bisphosphatase; forms dimer with Fyv10p that is then recruited to GID Complex by Gid8p; also required for sporulation; conserved protein that has a degenerate RING finger domain","termid":"PBO:0082636"}


id: GO:0046631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an alpha-beta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell activation","synonyms":[{"name":"alpha-beta T lymphocyte activation","type":"exact"},{"name":"alpha-beta T-cell activation","type":"exact"},{"name":"alpha-beta T-lymphocyte activation","type":"exact"}],"termid":"GO:0046631"}


id: PBO:0046516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum lectin 1 pseudogene 1","termid":"PBO:0046516"}


id: GO:0046602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the separation of duplicated centrosome components at the beginning of mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"mitotic centrosome separation","termid":"GO:0007100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic centrosome separation","termid":"GO:0046602"}


id: GO:0046398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-glucuronate, a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"UDP-glucuronate metabolic process","synonyms":[{"name":"UDP-glucuronate metabolism","type":"exact"}],"termid":"GO:0046398"}


id: PBO:0005123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set1","termid":"PBO:0005123"}


id: FYPO:0004094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during the meiotic cell cycle. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization during meiotic cell cycle","synonyms":[{"name":"abnormal cellular protein localisation during meiotic cell cycle","type":"exact"},{"name":"abnormal cellular protein localization during meiotic cell cycle","type":"exact"},{"name":"abnormal protein localisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004094"}


id: GO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splicing of Group III introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group III introns, that is involved in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions begun by a bulged adenosine residue within the intron sequence as the initiating nucleophile. The intron is excised as a lariat. Though very similar in structure and mechanism to Group II introns, Group III introns are smaller and more streamlined and the splice site consensus sequences are not as well conserved.","definition_xrefs":["PMID:11377794","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","termid":"GO:0000377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"Group III intron splicing","synonyms":[{"name":"mRNA splicing","type":"related"}],"termid":"GO:0000374"}


id: PBO:0044802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 103A","termid":"PBO:0044802"}


id: PBO:0086533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; overlaps ORF YEL010W","termid":"PBO:0086533"}


id: GO:0045353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Blocks the binding of interleukin-1 to interleukin-1 type II receptors.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor antagonist activity","termid":"GO:0005152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0140678","GO:0005515","GO:0005488","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"interleukin-1 type II receptor antagonist activity","synonyms":[{"name":"IL-1ra type II","type":"exact"}],"termid":"GO:0045353"}


id: GO:0032305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled release of an icosanoid from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid transport","termid":"GO:2000193"},{"relation_name":"positively_regulates","term_name":"icosanoid secretion","termid":"GO:0032309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of icosanoid secretion","synonyms":[{"name":"activation of icosanoid secretion","type":"narrow"},{"name":"positive regulation of eicosanoid secretion","type":"exact"},{"name":"stimulation of icosanoid secretion","type":"narrow"},{"name":"up regulation of icosanoid secretion","type":"exact"},{"name":"up-regulation of icosanoid secretion","type":"exact"},{"name":"upregulation of icosanoid secretion","type":"exact"}],"termid":"GO:0032305"}


id: GO:1905929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of invadopodium disassembly.","definition_xrefs":["PMID:15684033","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invadopodium disassembly (obsolete GO:1905929)","synonyms":[{"name":"activation of invadopodium disassembly","type":"narrow"},{"name":"up regulation of invadopodium disassembly","type":"exact"},{"name":"up-regulation of invadopodium disassembly","type":"exact"},{"name":"upregulation of invadopodium disassembly","type":"exact"}],"termid":"GO:1905929"}


id: GO:0008132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins, including elastin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pancreatic elastase activity (obsolete GO:0008132)","synonyms":[{"name":"pancreatic elastase activity","type":"exact"}],"termid":"GO:0008132"}


id: GO:1990915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an ascospore wall.","definition_xrefs":["PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cell wall","termid":"GO:0005199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of ascospore wall","termid":"GO:1990915"}


id: GO:0032419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of an lysosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of lysosome membrane (obsolete GO:0032419)","synonyms":[{"name":"extrinsic to lysosomal membrane","type":"exact"},{"name":"extrinsic to lysosome membrane","type":"exact"}],"termid":"GO:0032419"}


id: PBO:0074570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 26","termid":"PBO:0074570"}


id: GO:2001285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of BMP secretion.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of BMP secretion","termid":"GO:2001284"},{"relation_name":"negatively_regulates","term_name":"BMP secretion","termid":"GO:0038055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of BMP secretion","synonyms":[{"name":"negative regulation of BMP protein secretion","type":"exact"},{"name":"negative regulation of bone morphogenetic protein secretion","type":"exact"}],"termid":"GO:2001285"}


id: GO:0060599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of a mammary duct.","definition_xrefs":["GOC:dph","PMID:17120154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sprouting from an epithelium","termid":"GO:0060601"},{"relation_name":"part_of","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting involved in mammary gland duct morphogenesis","synonyms":[{"name":"mammary gland duct secondary branching","type":"exact"}],"termid":"GO:0060599"}


id: FYPO:0001519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A molecular function phenotype in which the observed rate of gamma-glutamyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal gamma-glutamyltransferase activity (obsolete FYPO:0001519)","synonyms":[{"name":"abnormal GGT activity","type":"broad"},{"name":"abnormal gamma-glutamyl transpeptidase activity","type":"exact"}],"termid":"FYPO:0001519"}


id: PBO:0070474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 9","termid":"PBO:0070474"}


id: PBO:0060795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 1","termid":"PBO:0060795"}


id: PBO:0081028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 10","termid":"PBO:0081028"}


id: PBO:0054190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1565","termid":"PBO:0054190"}


id: GO:0004694
data:
  {"annotated_genes":["SJAG_00690","SJAG_00169","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88542,88845,105821],"is_not":false,"summary":null,"term":"GO:0004694"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [eukaryotic translation initiation factor 2 alpha subunit] = ADP + [eukaryotic translation initiation factor 2 alpha subunit] phosphate.","definition_xrefs":["GOC:mah","InterPro:IPR015516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0140096","GO:0004672","GO:0016740"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2alpha kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.11.1"],"termid":"GO:0004694","terms_by_termid":{"GO:0004694":null}}


id: PBO:0072933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 13","termid":"PBO:0072933"}


id: PBO:0091547
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SPT15","termid":"PBO:0091547"}


id: GO:0120260
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A set of four specialized microtubules that originates from the basal bodies and wraps around the ciliary pocket membrane, likely supporting its distinct flask shape.","definition_xrefs":["GOC:ach","DOI:10.5772/66859","GOC:krc","PMID:19299460","PMID:32518185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary microtubule quartet","synonyms":[{"name":"ciliary MtQ","type":"exact"}],"termid":"GO:0120260"}


id: PBO:0049046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 37","termid":"PBO:0049046"}


id: PBO:0057220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378h","termid":"PBO:0057220"}


id: PBO:0036012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036012"}


id: GO:0044096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A short filamentous structure on the surface of a bacterial cell distinguished from other pili by post-translational N-methylation of the pilin monomers.","definition_xrefs":["GOC:pamgo_curators","PMID:28496159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type IV pilus","synonyms":[{"name":"TFP","type":"exact"},{"name":"type 4 pilus","type":"exact"},{"name":"type IV fimbriae","type":"exact"}],"termid":"GO:0044096"}


id: GO:0048348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a paraxial mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}


id: PBO:0072165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 2","termid":"PBO:0072165"}


id: FYPO:0007331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing formaldehyde.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on formaldehyde","synonyms":[{"name":"normal cell population growth in presence of formaldehyde","type":"exact"},{"name":"normal cell population growth on formaldehyde","type":"exact"},{"name":"normal vegetative cell population growth on formaldehyde","type":"exact"}],"termid":"FYPO:0007331"}


id: PBO:0052893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-4","termid":"PBO:0052893"}


id: GO:0090364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the aggregation, arrangement and bonding together of a mature, active proteasome complex.","definition_xrefs":["GOC:elh","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"proteasome assembly","termid":"GO:0043248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of proteasome assembly","termid":"GO:0090364"}


id: PBO:0054922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2336","termid":"PBO:0054922"}


id: PBO:0085424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pleiotropic negative transcriptional regulator; involved in Ras-CAMP and lysine biosynthetic pathways and nitrogen regulation; involved in retrograde (RTG) mitochondria-to-nucleus signaling","termid":"PBO:0085424"}


id: GO:0090394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the establishment or decreases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"negatively_regulates","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of excitatory postsynaptic potential","synonyms":[{"name":"negative regulation of EPSP","type":"related"},{"name":"negative regulation of excitatory post-synaptic membrane potential","type":"exact"},{"name":"reduction of excitatory postsynaptic membrane potential","type":"exact"}],"termid":"GO:0090394"}


id: PBO:0039527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 8","termid":"PBO:0039527"}


id: PBO:0042437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 intronic transcript 1","termid":"PBO:0042437"}


id: PBO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydroxy Urea Sensitive","termid":"PBO:0000620"}


id: MOD:00107
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to L-tryptophan amide.","definition_xrefs":["PubMed:3947348","RESID:AA0098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tryptophan amide","synonyms":[{"name":"(2S)-2-amino-3-(1H-indol-3-yl)propanamide","type":"exact"},{"name":"L-tryptophan amide","type":"exact"},{"name":"MOD_RES Tryptophan amide","type":"exact"},{"name":"TrpN","type":"exact"},{"name":"amidated L-tryptophan","type":"exact"},{"name":"tryptophanamide","type":"exact"}],"termid":"MOD:00107"}


id: PATO:0002253
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being roundish, flattish shape, possibly with a slightly angled edge.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flat","termid":"PATO:0000407"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelike","synonyms":[{"name":"plate-like","type":"exact"}],"termid":"PATO:0002253"}


id: PBO:0043514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 9","termid":"PBO:0043514"}


id: GO:1900642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of austinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of austinol biosynthetic process","termid":"GO:1900640"},{"relation_name":"positively_regulates","term_name":"austinol biosynthetic process","termid":"GO:1900560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of austinol biosynthetic process","synonyms":[{"name":"activation of austinol anabolism","type":"exact"},{"name":"activation of austinol biosynthesis","type":"exact"},{"name":"activation of austinol biosynthetic process","type":"narrow"},{"name":"activation of austinol formation","type":"exact"},{"name":"activation of austinol synthesis","type":"exact"},{"name":"positive regulation of austinol anabolism","type":"exact"},{"name":"positive regulation of austinol biosynthesis","type":"exact"},{"name":"positive regulation of austinol formation","type":"exact"},{"name":"positive regulation of austinol synthesis","type":"exact"},{"name":"up regulation of austinol anabolism","type":"exact"},{"name":"up regulation of austinol biosynthesis","type":"exact"},{"name":"up regulation of austinol biosynthetic process","type":"exact"},{"name":"up regulation of austinol formation","type":"exact"},{"name":"up regulation of austinol synthesis","type":"exact"},{"name":"up-regulation of austinol anabolism","type":"exact"},{"name":"up-regulation of austinol biosynthesis","type":"exact"},{"name":"up-regulation of austinol biosynthetic process","type":"exact"},{"name":"up-regulation of austinol formation","type":"exact"},{"name":"up-regulation of austinol synthesis","type":"exact"},{"name":"upregulation of austinol anabolism","type":"exact"},{"name":"upregulation of austinol biosynthesis","type":"exact"},{"name":"upregulation of austinol biosynthetic process","type":"exact"},{"name":"upregulation of austinol formation","type":"exact"},{"name":"upregulation of austinol synthesis","type":"exact"}],"termid":"GO:1900642"}


id: FYPO:0005624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ultraviolet light during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to UV during vegetative growth","termid":"FYPO:0000268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to UV during mitotic S phase","synonyms":[{"name":"decreased growth during cellular response to UV during mitotic S phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to UV during mitotic S phase","type":"exact"},{"name":"hypersensitive to UV during mitotic S phase","type":"exact"},{"name":"increased sensitivity to UV irradiation during mitotic S phase","type":"exact"},{"name":"sensitive to UV during S phase during vegetative growth","type":"exact"},{"name":"sensitive to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"sensitive to ultraviolet light during mitotic S phase","type":"exact"}],"termid":"FYPO:0005624"}


id: PBO:0000354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane protein involved in karyogamy Tht1","termid":"PBO:0000354"}


id: PBO:0066258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 1","termid":"PBO:0066258"}


id: GO:0120212
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A centrosome-based structure consisting of two cylindrical microtubule-based centrioles and associated components which anchors the flagellum to the sperm head.","definition_xrefs":["PMID:24415959","GOC:krc","PMID:30032984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm head-tail coupling apparatus","secondary_identifiers":["MP:0009830"],"synonyms":[{"name":"HTCA","type":"related"},{"name":"head-tail coupling apparatus","type":"exact"},{"name":"implantation fossa","type":"related"},{"name":"sperm connecting piece","type":"related"},{"name":"sperm neck","type":"related"}],"termid":"GO:0120212"}


id: PBO:0049147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 4","termid":"PBO:0049147"}


id: PBO:0029209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cobalt","termid":"PBO:0029209"}


id: GO:0005395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + eye pigment precursor(in) = ADP + phosphate + eye pigment precursor(out).","definition_xrefs":["TC:3.A.1.204.1"],"gene_count":0,"genotype_count":0,"name":"obsolete eye pigment precursor transporter activity (obsolete GO:0005395)","termid":"GO:0005395"}


id: PBO:0060920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 7","termid":"PBO:0060920"}


id: GO:0008155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete larval behavior (sensu Drosophila) (obsolete GO:0008155)","synonyms":[{"name":"larval behavior (sensu Drosophila)","type":"exact"}],"termid":"GO:0008155"}


id: PBO:0012262
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GPM1","termid":"PBO:0012262"}


id: PBO:0046877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A2, pseudogene","termid":"PBO:0046877"}


id: PBO:0089112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule severing ATPase Spg4","termid":"PBO:0089112"}


id: FYECO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which an iron chelator was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ iron chelator","termid":"FYECO:0000340"}


id: PBO:0042878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 161","termid":"PBO:0042878"}


id: GO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK activity (obsolete GO:0000188)","synonyms":[{"name":"termination of MAPK activity","type":"exact"},{"name":"inactivation of MAPK during sporulation","type":"narrow"}],"termid":"GO:0000188"}


id: GO:0070990
data:
  {"annotated_genes":["SJAG_03291","SJAG_02279","SJAG_02558","SJAG_04914"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83472,90976],"is_not":false,"summary":null,"term":"GO:0070990"},{"annotations":[110025,87824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990446"},{"annotations":[110026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990447"}]},"cv_name":"molecular_function","definition":"Binding to a small nuclear ribonucleoprotein particle.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02279":null,"SJAG_02558":null,"SJAG_03291":null,"SJAG_04914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"snRNP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070990","terms_by_termid":{"GO:0070990":null,"GO:1990446":null,"GO:1990447":null}}


id: GO:0009956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial pattern formation","synonyms":[{"name":"radial pattern specification","type":"narrow"}],"termid":"GO:0009956"}


id: GO:0015756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which fucose is transported across a lipid bilayer, from one side of a membrane to the other. Fucose is 6-deoxygalactose and has two enantiomers, D-fucose and L-fucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"fucose transmembrane transport","synonyms":[{"name":"fucose transport","type":"related"}],"termid":"GO:0015756"}


id: PBO:0053109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase 1","termid":"PBO:0053109"}


id: GO:0002560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a basophil.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil mediated immunity","termid":"GO:0002560"}


id: FYPO:0004995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis I","termid":"FYPO:0003563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of meiosis I","synonyms":[{"name":"normal meiosis I progression","type":"related"},{"name":"normal onset of first meiotic nuclear division","type":"exact"},{"name":"normal timing of meiosis I","type":"related"}],"termid":"FYPO:0004995"}


id: PR:Q9P6N4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase pep5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.12","secondary_identifiers":["UniProtKB:Q9P6N4"],"synonyms":[{"name":"Spom972h-VPS11","type":"exact"},{"name":"carboxypeptidase Y-deficient protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"histone E3 ligase pep5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar protein sorting-associated protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6N4"}


id: PR:O14335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein PLAGL1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein scr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.02c","secondary_identifiers":["UniProtKB:O14335"],"synonyms":[{"name":"SPBC1D7.02c","type":"related"},{"name":"Spom972h-PLAGL1","type":"exact"}],"termid":"PR:O14335"}


id: PBO:0091618
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homologous PM factor","termid":"PBO:0091618"}


id: GO:0106197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic anions llinked to the hydrolysis of a diphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic anions linked to the hydrolysis of a diphosphate (obsolete GO:0106197)","secondary_identifiers":["EC:7.3.3.-"],"termid":"GO:0106197"}


id: SO:0001313
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_N6_2prime_O_trimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_N6_2_prime_O_trimethyladenosine","secondary_identifiers":["RNAMOD:089"],"synonyms":[{"name":"N6,N6,2'-O-trimethyladenosine","type":"exact"},{"name":"m62Am","type":"exact"}],"termid":"SO:0001313"}


id: PBO:0063818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology like domain family A member 3","termid":"PBO:0063818"}


id: PBO:0026698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_arabinose_carbon_source","termid":"PBO:0026698"}


id: GO:0015020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside.","definition_xrefs":["RHEA:21032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glucuronosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9758661","Reactome:R-HSA-9632038","Reactome:R-HSA-9756183","Reactome:R-HSA-158546","Reactome:R-HSA-9756134","Reactome:R-HSA-159194","Reactome:R-HSA-5604954","Reactome:R-HSA-8941701","Reactome:R-HSA-174916","Reactome:R-HSA-174931","Reactome:R-HSA-9749977","Reactome:R-HSA-159179","Reactome:R-HSA-2162099","Reactome:R-HSA-5604975","Reactome:R-HSA-9036102","Reactome:R-HSA-9036104","Reactome:R-HSA-9632039","GO:0003981","MetaCyc:UDP-GLUCURONOSYLTRANSFERASE-RXN","EC:2.4.1.17","Reactome:R-HSA-9638097","Reactome:R-HSA-9756156","Reactome:R-HSA-5617143"],"synonyms":[{"name":"1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"17-OH steroid UDPGT activity","type":"narrow"},{"name":"17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"3-OH androgenic UDPGT activity","type":"narrow"},{"name":"3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"4-nitrophenol UDPGT activity","type":"narrow"},{"name":"GT activity","type":"related"},{"name":"PNP-UDPGT","type":"related"},{"name":"UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"UDP glucuronic acid transferase activity","type":"related"},{"name":"UDP glucuronosyltransferase activity","type":"related"},{"name":"UDP glucuronyltransferase activity","type":"related"},{"name":"UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"related"},{"name":"UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"UDP-glucuronosyltransferase activity","type":"related"},{"name":"UDP-glucuronyltransferase activity","type":"related"},{"name":"UDPGA transferase activity","type":"related"},{"name":"UDPGA-glucuronyltransferase activity","type":"related"},{"name":"UDPGT activity","type":"related"},{"name":"UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"bilirubin UDPGT activity","type":"narrow"},{"name":"bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"morphine glucuronyltransferase activity","type":"narrow"},{"name":"p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"pnp-UDPGT activity","type":"narrow"},{"name":"uridine 5'-diphosphoglucuronyltransferase activity","type":"related"},{"name":"uridine diphosphate glucuronyltransferase activity","type":"related"},{"name":"uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"uridine diphosphoglucuronosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucuronyltransferase activity","type":"related"}],"termid":"GO:0015020"}


id: PBO:0048449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grancalcin","termid":"PBO:0048449"}


id: GO:0103059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol oxoanion + UDP-L-rhamnose = H+ + kaempferol-3-rhamnoside + UDP(3-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-L-rhamnose:kaempferol 3-O-rhamnosyltransferase activity (obsolete GO:0103059)","termid":"GO:0103059"}


id: GO:0035179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fine-tuning the spatial position of a larva in response to variability in their environment. For example, reorientation of a larva in the direction of a food source.","definition_xrefs":["PMID:10880478"],"gene_count":0,"genotype_count":0,"name":"obsolete larval turning behavior (obsolete GO:0035179)","synonyms":[{"name":"larval turning behaviour","type":"exact"}],"termid":"GO:0035179"}


id: GO:0036464
data:
  {"annotated_genes":["SJAG_01897","SJAG_03157","SJAG_01625","SJAG_02573","SJAG_00544","SJAG_03424","SJAG_03214","SJAG_03277","SJAG_04350","SJAG_03070","SJAG_02663","SJAG_00474","SJAG_01222","SJAG_02638","SJAG_01954","SJAG_03132","SJAG_01026","SJAG_02419","SJAG_02995","SJAG_04407","SJAG_01479","SJAG_03498","SJAG_03283","SJAG_03876","SJAG_02164","SJAG_02540","SJAG_16454","SJAG_03276","SJAG_16457","SJAG_03460","SJAG_04480","SJAG_02263","SJAG_05010","SJAG_03762","SJAG_03597","SJAG_02469","SJAG_00285","SJAG_01822","SJAG_02808","SJAG_04427","SJAG_00391","SJAG_00423","SJAG_04880","SJAG_02239","SJAG_02213","SJAG_03113","SJAG_04640","SJAG_02592","SJAG_01159","SJAG_04672","SJAG_01910","SJAG_04772","SJAG_01317","SJAG_01053","SJAG_04342","SJAG_00686","SJAG_03023","SJAG_04744","SJAG_01548","SJAG_00759","SJAG_01512","SJAG_01436","SJAG_03696","SJAG_01650","SJAG_05694","SJAG_02628","SJAG_00507","SJAG_00966","SJAG_03954"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83558,101786,86219,109708,88572,90599,85728,86296,86349,98851,78190,101701,113466,93179,101436,101323,109785,106123,92140,87569,85511,93856,90406,94589,85932,86387,95008,103068,86339,102786,73578,106022,107218,101787,90826,90598,89036,85186,84392,72083,108157,96010,109487,89037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010494"},{"annotations":[102257,88573,88618,89441,111314,87955,91562,85730,91877,104670,109489,109641,108311,111830,91647,97094,111098,87572,106076,88016,101702,107219,113351,96012,109041,111499,99143,84276,107402,108158,112788,91681,86342,105340,106025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000932"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein granule located in the cytoplasm.","definition_xrefs":["PMID:15121898","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein granule","termid":"GO:0035770"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":69,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00391":null,"SJAG_00423":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00966":null,"SJAG_01026":null,"SJAG_01053":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01436":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01625":null,"SJAG_01650":null,"SJAG_01822":null,"SJAG_01897":null,"SJAG_01910":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02469":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02663":null,"SJAG_02808":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03113":null,"SJAG_03132":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03460":null,"SJAG_03498":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_03876":null,"SJAG_03954":null,"SJAG_04342":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic ribonucleoprotein granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Staufen granule","type":"narrow"}],"termid":"GO:0036464","terms_by_termid":{"GO:0000932":null,"GO:0010494":null}}


id: PBO:0082336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding protein required for mismatch repair; required for both mitosis and meiosis; functions as a heterodimer with Mlh1p; binds double- and single-stranded DNA via its N-terminal domain; required for silencing at the silent mating-type loci and telomeres; similar to E. coli MutL","termid":"PBO:0082336"}


id: GO:0046003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the syncytial blastoderm mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytial blastoderm mitotic cell cycle","termid":"GO:0007348"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle, embryonic","termid":"GO:0045976"},{"relation_name":"negatively_regulates","term_name":"syncytial blastoderm mitotic cell cycle","termid":"GO:0035186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of syncytial blastoderm mitotic cell cycle","synonyms":[{"name":"down regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through syncytial blastoderm mitotic cell cycle","type":"narrow"},{"name":"negative regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"negative regulation of syncytial blastoderm cell cycle progression","type":"exact"}],"termid":"GO:0046003"}


id: PBO:0004653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med10","termid":"PBO:0004653"}


id: GO:0018295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via 3'-(8-alpha-FAD)-L-histidine.","definition_xrefs":["RESID:AA0144"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via 3'-(8alpha-FAD)-L-histidine (obsolete GO:0018295)","termid":"GO:0018295"}


id: GO:1903294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamate secretion, neurotransmission.","definition_xrefs":["GOC:TermGenie","PMID:16782817","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate secretion","termid":"GO:0014048"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glutamatergic","termid":"GO:0051966"},{"relation_name":"regulates","term_name":"glutamate secretion, neurotransmission","termid":"GO:0061535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of glutamate secretion, neurotransmission","termid":"GO:1903294"}


id: PBO:0086474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; identified by expression profiling and mass spectrometry","termid":"PBO:0086474"}


id: PBO:0028021
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_physical_quality_phenotype","termid":"PBO:0028021"}


id: PBO:0057231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 410","termid":"PBO:0057231"}


id: SO:0000444
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding exon in the 3' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_exon","termid":"SO:0000198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_noncoding_exon","synonyms":[{"name":"three prime noncoding exon","type":"exact"}],"termid":"SO:0000444"}


id: PBO:0049458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1 pseudogene 3","termid":"PBO:0049458"}


id: GO:0003288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a ventricular septum intermedium is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septum morphogenesis","termid":"GO:0060412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular septum intermedium morphogenesis","termid":"GO:0003288"}


id: PBO:0040513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin receptor 2","termid":"PBO:0040513"}


id: PBO:0068834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 72, pseudogene","termid":"PBO:0068834"}


id: PBO:0032752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic inner centromere protein, shugoshin, Sgo1","termid":"PBO:0032752"}


id: PBO:0078610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64","termid":"PBO:0078610"}


id: PBO:0061976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AP member 1","termid":"PBO:0061976"}


id: FYPO:0002123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 4,6-pyruvylated D-galactose (4,6-O-[(1R)-1-carboxyethylidene]-D-galactose) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"pyruvylated galactose absent from cell","synonyms":[{"name":"4,6-O-[(1R)-1-carboxyethylidene]-D-galactose absent from cell","type":"exact"},{"name":"4,6-pyruvylated D-galactose absent from cell","type":"exact"},{"name":"PvGal absent from cell","type":"exact"},{"name":"pyruvylated galactose absent from cell during mitotic cell cycle","type":"related"},{"name":"pyruvylated galactose absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002123"}


id: GO:0120022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the glucagon family peptide hormone (e.g. glucagon, glucagon-like peptides, oxyntomodulin, glicentin, ADCYAP1, GHRH, secretin, VIP, GIP).","definition_xrefs":["PMID:17715056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"glucagon family peptide binding","secondary_identifiers":["GO:0120024"],"synonyms":[{"name":"glucagon binding","type":"narrow"},{"name":"glucagon-like peptide binding","type":"narrow"}],"termid":"GO:0120022"}


id: PR:O74776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial ribosome-associated GTPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome-associated GTPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.04c","secondary_identifiers":["UniProtKB:O74776"],"synonyms":[{"name":"SPBC25B2.04c","type":"related"},{"name":"Spom972h-MTG1","type":"exact"}],"termid":"PR:O74776"}


id: PBO:0039072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC component 4","termid":"PBO:0039072"}


id: PBO:0050215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 32","termid":"PBO:0050215"}


id: PBO:0041264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q binding protein pseudogene 1","termid":"PBO:0041264"}


id: PR:P87241
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rib2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaminohydroxyphosphoribosylamino-pyrimidine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.16","synonyms":[{"name":"DRAP deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rib2","type":"exact"},{"name":"riboflavin-specific deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87241"}


id: GO:0032123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Inward projections of the cytoskeletal structures of the oral apparatus, which form a fiber that extends past the cytostome into the cytoplasm.","definition_xrefs":["PMID:10503189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"oral apparatus","termid":"GO:0031912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"deep fiber","synonyms":[{"name":"deep fibre","type":"exact"}],"termid":"GO:0032123"}


id: GO:0045110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the bundles of intermediate filaments. Intermediate filament-associated proteins (IFAPs) cross-link intermediate filaments with one another, forming a bundle or a network, and with other cell structures, including the plasma membrane. The organization of intermediate filaments and their supportive function in various cells types depends in large part on their linkage to other cell structures via IFAPs.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"intermediate filament organization","termid":"GO:0045109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"intermediate filament bundle assembly","synonyms":[{"name":"tonofilament assembly","type":"narrow"}],"termid":"GO:0045110"}


id: PBO:0091013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic/meiotic cohesin complex ATPase subunit Psm3/Smc3","termid":"PBO:0091013"}


id: PBO:0048604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit 8 homolog","termid":"PBO:0048604"}


id: PBO:0074917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 88A","termid":"PBO:0074917"}


id: GO:0002412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of antigen transcytosis carried out by M cells in the mucosal-associated lymphoid tissue (MALT). Transcytosis is the process of the directed movement of endocytosed material through the cell and its exocytosis from the plasma membrane at the opposite side. M cells are specialized epithelia cells with a microfold structure that are adept at moving antigens from the gut lumen to antigen presenting cells in the MALT.","definition_xrefs":["ISBN:0781735149","GOC:jal","PMID:12843411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcytosis","termid":"GO:0045056"},{"relation_name":"part_of","term_name":"antigen sampling by M cells in mucosal-associated lymphoid tissue","termid":"GO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"antigen transcytosis by M cells in mucosal-associated lymphoid tissue","synonyms":[{"name":"antigen transcytosis by M cells in MALT","type":"exact"},{"name":"antigen transport by M cells in MALT","type":"exact"},{"name":"antigen transport by M cells in mucosal-associated lymphoid tissue","type":"exact"}],"termid":"GO:0002412"}


id: PR:Q09798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PAB-dependent poly(A)-specific ribonuclease subunit PAN2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00288","PANTHER:PTHR15728:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAB-dependent poly(A)-specific ribonuclease subunit PAN2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.04","secondary_identifiers":["UniProtKB:Q09798"],"synonyms":[{"name":"PAB1P-dependent poly(A)-nuclease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAN deadenylation complex catalytic subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PAN2","type":"exact"}],"termid":"PR:Q09798"}


id: GO:0120252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a hydrocarbon, a compound consisting of carbon and hydrogen only.","definition_xrefs":["GOC:krc","Wikipedia:Hydrocarbon"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrocarbon metabolic process","synonyms":[{"name":"hydrocarbon metabolism","type":"exact"}],"termid":"GO:0120252"}


id: PBO:0064086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITPNA antisense RNA 1","termid":"PBO:0064086"}


id: PBO:0090158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission protein Fis1","termid":"PBO:0090158"}


id: PBO:0039358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenin Y-linked","termid":"PBO:0039358"}


id: PBO:0081366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 204, pseudogene","termid":"PBO:0081366"}


id: PBO:0064294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perilipin 2","termid":"PBO:0064294"}


id: MOD:01185
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-asparagine.","definition_xrefs":["PubMed:17962566","RESID:AA0003#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-asparagine residue","termid":"MOD:00012"},{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amidated L-aspartic acid","synonyms":[{"name":"(2S)-2-amino-4-butanediamic acid","type":"exact"},{"name":"2,4-bis(azanyl)-4-oxobutanoic acid","type":"exact"},{"name":"2,4-diamino-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-3-carbamoylpropanoic acid","type":"exact"},{"name":"2-amino-4-butanediamic acid","type":"exact"},{"name":"2-aminosuccinamic acid","type":"exact"},{"name":"2-aminosuccinic acid 4-amide","type":"exact"},{"name":"4NAsp","type":"exact"},{"name":"L-asparagine","type":"exact"},{"name":"MOD_RES Amidated aspartic acid","type":"exact"},{"name":"alpha-amino-beta-carbamylpropionic acid","type":"exact"},{"name":"alpha-aminosuccinamic acid","type":"exact"},{"name":"aspartic acid 4-amide","type":"exact"},{"name":"aspartic acid beta-amide","type":"exact"},{"name":"beta-asparagine","type":"exact"}],"termid":"MOD:01185"}


id: PBO:0077137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIRAP antisense RNA 1","termid":"PBO:0077137"}


id: PR:Q09805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11679:SF3","PRO:DNx","OMA:SCHPO00316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.03c","secondary_identifiers":["UniProtKB:Q09805"],"synonyms":[{"name":"Spom972h-VPS45","type":"exact"}],"termid":"PR:Q09805"}


id: PBO:0074054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 34","termid":"PBO:0074054"}


id: GO:1900380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of asperthecin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of asperthecin biosynthetic process","termid":"GO:1900379"},{"relation_name":"negatively_regulates","term_name":"asperthecin biosynthetic process","termid":"GO:0036184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of asperthecin biosynthetic process","synonyms":[{"name":"down regulation of asperthecin biosynthesis","type":"exact"},{"name":"down regulation of asperthecin biosynthetic process","type":"exact"},{"name":"down regulation of asperthecin formation","type":"exact"},{"name":"down regulation of asperthecin synthesis","type":"exact"},{"name":"down-regulation of asperthecin biosynthesis","type":"exact"},{"name":"down-regulation of asperthecin biosynthetic process","type":"exact"},{"name":"down-regulation of asperthecin formation","type":"exact"},{"name":"down-regulation of asperthecin synthesis","type":"exact"},{"name":"downregulation of asperthecin biosynthesis","type":"exact"},{"name":"downregulation of asperthecin biosynthetic process","type":"exact"},{"name":"downregulation of asperthecin formation","type":"exact"},{"name":"downregulation of asperthecin synthesis","type":"exact"},{"name":"inhibition of asperthecin biosynthesis","type":"exact"},{"name":"inhibition of asperthecin biosynthetic process","type":"narrow"},{"name":"inhibition of asperthecin formation","type":"exact"},{"name":"inhibition of asperthecin synthesis","type":"exact"},{"name":"negative regulation of asperthecin biosynthesis","type":"exact"},{"name":"negative regulation of asperthecin formation","type":"exact"},{"name":"negative regulation of asperthecin synthesis","type":"exact"}],"termid":"GO:1900380"}


id: MOD:01558
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01558"}


id: PBO:0080995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 26","termid":"PBO:0080995"}


id: PR:O94506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor rsm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1753.05","synonyms":[{"name":"Spom972h-rsm1","type":"exact"}],"termid":"PR:O94506"}


id: GO:0018799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ = CO2 + phenol.","definition_xrefs":["EC:4.1.1.61","RHEA:10876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R01238","MetaCyc:4-HYDROXYBENZOATE-DECARBOXYLASE-RXN","UM-BBD_reactionID:r0159"],"synonyms":[{"name":"4-hydroxybenzoate carboxy-lyase (phenol-forming)","type":"related"},{"name":"4-hydroxybenzoate carboxy-lyase activity","type":"related"},{"name":"p-hydroxybenzoate decarboxylase activity","type":"related"}],"termid":"GO:0018799"}


id: PBO:0071368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 27","termid":"PBO:0071368"}


id: GO:0050059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + lombricine = ADP + N-phospholombricine.","definition_xrefs":["MetaCyc:LOMBRICINE-KINASE-RXN","EC:2.7.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"lombricine kinase activity","secondary_identifiers":["RHEA:23292"],"synonyms":[{"name":"ATP:lombricine N-phosphotransferase activity","type":"related"}],"termid":"GO:0050059"}


id: GO:0120295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutaminyl-[histone] + serotonin = 5-serotonyl-L-glutamyl-[histone] + NH4(+).","definition_xrefs":["GOC:sp","PMID:30867594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide serotonyltransferase activity","termid":"GO:0120294"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0140096","GO:0016746"],"is_obsolete":false,"name":"histone serotonyltransferase activity","secondary_identifiers":["RHEA:66552"],"termid":"GO:0120295"}


id: PBO:0079615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 K","termid":"PBO:0079615"}


id: PBO:0073240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 4","termid":"PBO:0073240"}


id: PBO:0055631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3070","termid":"PBO:0055631"}


id: GO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class I PI3K activated via heterotrimeric G-proteins.","definition_xrefs":["PMID:11050418"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-4-phosphate kinase, class IB (obsolete GO:0004433)","synonyms":[{"name":"1-phosphatidylinositol-4-phosphate kinase, class IB","type":"exact"}],"termid":"GO:0004433"}


id: PBO:0046511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 5","termid":"PBO:0046511"}


id: PR:Q9P5N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alr2 gene.","definition_xrefs":["UniProtKB:Q9P5N3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.02","synonyms":[{"name":"Spom972h-alr2","type":"exact"}],"termid":"PR:Q9P5N3"}


id: PBO:0088058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase; involved in proteasome-dependent degradation of aberrant nuclear proteins; targets substrates with regions of exposed hydrophobicity containing 5 or more contiguous hydrophobic residues; contains intrinsically disordered regions that contribute to substrate recognition; prefers a window of exposed hydrophobicity that causes a particular level of protein insolubility, suggesting that San1p evolved to target highly aggregation-prone proteins","termid":"PBO:0088058"}


id: GO:1901046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oviposition.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of egg-laying behavior","termid":"GO:0046662"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of egg-laying behavior","synonyms":[{"name":"activation of egg laying","type":"broad"},{"name":"activation of egg-laying","type":"broad"},{"name":"activation of oviposition","type":"narrow"},{"name":"positive regulation of egg laying","type":"broad"},{"name":"positive regulation of egg-laying","type":"broad"},{"name":"positive regulation of oviposition","type":"exact"},{"name":"up regulation of egg laying","type":"broad"},{"name":"up regulation of egg-laying","type":"broad"},{"name":"up regulation of oviposition","type":"exact"},{"name":"up-regulation of egg laying","type":"broad"},{"name":"up-regulation of egg-laying","type":"broad"},{"name":"up-regulation of oviposition","type":"exact"},{"name":"upregulation of egg laying","type":"broad"},{"name":"upregulation of egg-laying","type":"broad"},{"name":"upregulation of oviposition","type":"exact"}],"termid":"GO:1901046"}


id: GO:0090149
data:
  {"annotated_genes":["SJAG_02848","SJAG_03464","SJAG_05261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91015,98611,98873],"is_not":false,"summary":null,"term":"GO:0090149"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the separation of a single continuous mitochondrial membrane into two membranes and contributes to mitochondrial fission.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane fission","termid":"GO:0090148"},{"relation_name":"part_of","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02848":null,"SJAG_03464":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"mitochondrial membrane fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane fission involved in mitochondrial fission","type":"exact"},{"name":"mitochondrial membrane scission","type":"exact"}],"termid":"GO:0090149","terms_by_termid":{"GO:0090149":null}}


id: GO:0016314
data:
  {"annotated_genes":["SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107409],"is_not":false,"summary":null,"term":"GO:0016314"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylinositol-3,4,5-trisphosphate + H2O = phosphatidylinositol-4,5-bisphosphate + phosphate.","definition_xrefs":["EC:3.1.3.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol trisphosphate phosphatase activity","termid":"GO:0034594"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:25017","MetaCyc:3.1.3.67-RXN","Reactome:R-HSA-202237","Reactome:R-HSA-2317387","Reactome:R-HSA-199456"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol-3,4,5-trisphosphate 3-phosphohydrolase activity","type":"related"},{"name":"MMAC1","type":"related"},{"name":"PI(3)P 3-phosphatase activity","type":"exact"},{"name":"PI(3,4,5)P3 3-phosphatase activity","type":"exact"},{"name":"PtdIns(3,4,5)P3 3-phosphatase activity","type":"exact"},{"name":"phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase activity","type":"related"}],"termid":"GO:0016314","terms_by_termid":{"GO:0016314":null}}


id: PBO:0062891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovo like zinc finger 3","termid":"PBO:0062891"}


id: GO:0016617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-L-proline + NAD+ = 4-oxoproline + NADH + H+.","definition_xrefs":["EC:1.1.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-oxoproline reductase activity","secondary_identifiers":["MetaCyc:4-OXOPROLINE-REDUCTASE-RXN","RHEA:13601"],"synonyms":[{"name":"4-hydroxy-L-proline:NAD+ oxidoreductase activity","type":"related"},{"name":"hydroxy-L-proline oxidase activity","type":"exact"},{"name":"hydroxyproline oxidase activity","type":"related"}],"termid":"GO:0016617"}


id: PBO:0090112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit","termid":"PBO:0090112"}


id: PBO:0086229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that inhibits Doa4p deubiquitinating activity; contributes to ubiquitin homeostasis by regulating the conversion of free ubiquitin chains to ubiquitin monomers by Doa4p; GFP-fusion protein localizes to endosomes","termid":"PBO:0086229"}


id: GO:0021645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the vagus nerve. This process pertains to the physical shaping of a rudimentary structure. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"vagus nerve morphogenesis","termid":"GO:0021644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve structural organization","synonyms":[{"name":"CN X structural organization","type":"related"},{"name":"vagus nerve structural organisation","type":"exact"}],"termid":"GO:0021645"}


id: PBO:0062577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 1 pseudogene","termid":"PBO:0062577"}


id: GO:0030302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deoxynucleotide, a deoxyribonucleoside in ester linkage to phosphate, commonly at the 5' position of deoxyribose, into, out of or within a cell.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"deoxynucleotide transport","termid":"GO:0030302"}


id: PBO:0071897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 35","termid":"PBO:0071897"}


id: PBO:0089657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS15 repeat family actin cortical patch component Ede1","termid":"PBO:0089657"}


id: PBO:0040338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 4","termid":"PBO:0040338"}


id: PBO:0048179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucosidase","termid":"PBO:0048179"}


id: GO:0001152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of binding to a specific DNA sequence motif in a type 1 RNA polymerase III (Pol III) promoter in order to recruit the transcription factor TFIIIC to the promoter.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase III type 1 promoter sequence-specific binding, TFIIIC recruiting (obsolete GO:0001152)","synonyms":[{"name":"RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIC recruiting transcription factor activity","type":"exact"},{"name":"TFIIIA activity","type":"related"},{"name":"type 1 RNA polymerase III promoter recognition","type":"exact"}],"termid":"GO:0001152"}


id: GO:0050162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + O2 + oxalate = 2 CO2 + H2O2.","definition_xrefs":["RHEA:21880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxalate oxidase activity","secondary_identifiers":["MetaCyc:OXALATE-OXIDASE-RXN","EC:1.2.3.4","KEGG_REACTION:R00273"],"synonyms":[{"name":"aero-oxalo dehydrogenase activity","type":"related"},{"name":"oxalate:oxygen oxidoreductase activity","type":"related"},{"name":"oxalic acid oxidase activity","type":"related"}],"termid":"GO:0050162"}


id: PBO:0062434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 97 pseudogene","termid":"PBO:0062434"}


id: PBO:0083357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene NUP159/YIL115C","termid":"PBO:0083357"}


id: PBO:0059751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 25","termid":"PBO:0059751"}


id: PBO:0011410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-axis_of","termid":"PBO:0011410"}


id: GO:0070645
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, granular structure that is found in the extracellular matrix of cell of the secretory tapetal layer that surrounds developing pollen grains. Ubisch bodies have a sporopollenin coat, are attached to the peritapetal wall, and may play a role in pollen development.","definition_xrefs":["PMID:14612572","PMID:16524248","GOC:ecd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Ubisch body","synonyms":[{"name":"orbicule","type":"exact"}],"termid":"GO:0070645"}


id: GO:0044269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"glycerol ether catabolic process","synonyms":[{"name":"glycerol ether breakdown","type":"exact"},{"name":"glycerol ether catabolism","type":"exact"},{"name":"glycerol ether degradation","type":"exact"}],"termid":"GO:0044269"}


id: PBO:0041511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 178","termid":"PBO:0041511"}


id: FYPO:0003062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear migration involved in conjugation with cellular fusion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal nucleus positioning","termid":"FYPO:0000517"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000301","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear congression during mating","synonyms":[{"name":"abnormal nuclear congression during karyogamy","type":"related"},{"name":"abnormal nuclear migration during mating","type":"exact"},{"name":"abnormal nuclear migration involved in conjugation with cellular fusion","type":"exact"},{"name":"abnormal nuclear movement during mating","type":"exact"},{"name":"abnormal nuclear movement during shmooing","type":"related"}],"termid":"FYPO:0003062"}


id: GO:0032256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a dense core granule to a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of secretory granule localization","termid":"GO:0032254"},{"relation_name":"part_of","term_name":"dense core granule localization","termid":"GO:0032253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of dense core granule localization","synonyms":[{"name":"establishment of dense core granule localisation","type":"exact"},{"name":"establishment of dense core vesicle localization","type":"exact"}],"termid":"GO:0032256"}


id: PBO:0050585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate 6-O-sulfotransferase 2","termid":"PBO:0050585"}


id: PBO:0046642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 23","termid":"PBO:0046642"}


id: PBO:0108956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR77 pseudogene 1","termid":"PBO:0108956"}


id: PBO:0045057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEU7 antisense RNA 1","termid":"PBO:0045057"}


id: GO:1903320
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein modification by small protein conjugation or removal.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-translational protein modification","termid":"GO:1901873"},{"relation_name":"regulates","term_name":"protein modification by small protein conjugation or removal","termid":"GO:0070647"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein modification by small protein conjugation or removal","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:1903320","terms_by_termid":{"GO:0033234":null}}


id: GO:0046015
data:
  {"annotated_genes":["SJAG_03911","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70946,102374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"}]},"cv_name":"biological_process","definition":"Any process involving glucose that modulates the frequency, rate or extent or transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03473":null,"SJAG_03911":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"regulation of transcription by glucose","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0046015","terms_by_termid":{"GO:0000433":null}}


id: PBO:0048908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member C, pseudogene","termid":"PBO:0048908"}


id: PR:O60161
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cirhin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03817","PRO:DNx","PANTHER:PTHR22841:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.02c","secondary_identifiers":["UniProtKB:O60161"],"synonyms":[{"name":"Spom972h-CIRH1A","type":"exact"},{"name":"U3 protein 4 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60161"}


id: PBO:0047478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 5","termid":"PBO:0047478"}


id: GO:0000773
data:
  {"annotated_genes":["SJAG_00812"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105426],"is_not":false,"summary":null,"term":"GO:0000773"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidyl-N-methylethanolamine = S-adenosyl-L-homocysteine + phosphatidyl-N-dimethylethanolamine. Also catalyzes the transfer of a further methylgroup, producing phosphatidylcholine.","definition_xrefs":["PMID:19366698","EC:2.1.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphatidyl-N-methylethanolamine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.1.1.71-RXN"],"synonyms":[{"name":"PLMT","type":"exact"},{"name":"S-adenosyl-L-methionine:phosphatidyl-N-methylethanolamine N-methyltransferase activity","type":"related"},{"name":"methyltransferase II","type":"related"},{"name":"phosphatidyl-N-methylethanolamine methyltransferase activity","type":"related"},{"name":"phosphatidyl-N-monomethylethanolamine methyltransferase activity","type":"related"},{"name":"phosphatidylethanolamine methyltransferase I","type":"related"},{"name":"phosphatidylmonomethylethanolamine methyltransferase activity","type":"related"},{"name":"phospholipid methyltransferase activity","type":"related"}],"termid":"GO:0000773","terms_by_termid":{"GO:0000773":null}}


id: PBO:0086619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086619"}


id: PBO:0084098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) that modulates Rho1p activity; involved in the cell integrity signaling pathway; interacts with Rgl1p; localization of Tus1p to the bed neck is regulated by Rgl1p; multicopy suppressor of tor2 mutation and ypk1 ypk2 double mutation; potential Cdc28p substrate","termid":"PBO:0084098"}


id: PBO:0063078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pappalysin 1","termid":"PBO:0063078"}


id: PBO:0073289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 11","termid":"PBO:0073289"}


id: PBO:0059862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitoregulin","termid":"PBO:0059862"}


id: FYPO:0007351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region on chromosome 3.","definition_xrefs":["PMID:31811152","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","synonyms":[{"name":"decreased homologous chromosome pairing at RNA584 locus","type":"narrow"},{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"}],"termid":"FYPO:0007351"}


id: PBO:0064120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 2, transient receptor potential cation channel","termid":"PBO:0064120"}


id: PR:P0CT37
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-4 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.13c","synonyms":[{"name":"Spom972h-Tf2-4","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT37"}


id: PBO:0001624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3c","termid":"PBO:0001624"}


id: GO:0031247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of actin rods, a cellular structure consisting of parallel, hexagonally arranged actin tubules.","definition_xrefs":["GOC:pg","PMID:14706699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"actin rod assembly","synonyms":[{"name":"actin rod formation","type":"related"}],"termid":"GO:0031247"}


id: PBO:0059052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX network transcriptional repressor","termid":"PBO:0059052"}


id: GO:0007497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior midgut over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"midgut development","termid":"GO:0007494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior midgut development","termid":"GO:0007497"}


id: PBO:0081397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 236","termid":"PBO:0081397"}


id: PBO:0069144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 395, pseudogene","termid":"PBO:0069144"}


id: PBO:0064545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 7 pseudogene","termid":"PBO:0064545"}


id: GO:0030976
data:
  {"annotated_genes":["SJAG_02734","SJAG_04842","SJAG_03985","SJAG_03743","SJAG_00706","SJAG_02464"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84544,93343,93344,106275,107993,109425],"is_not":false,"summary":null,"term":"GO:0030976"}]},"cv_name":"molecular_function","definition":"Binding to thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"quaternary ammonium group binding","termid":"GO:0050997"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_02464":null,"SJAG_02734":null,"SJAG_03743":null,"SJAG_03985":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thiamine pyrophosphate binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TPP binding","type":"exact"},{"name":"aneurine pyrophosphate binding","type":"exact"},{"name":"cocarboxylase binding","type":"exact"},{"name":"diphosphothiamin binding","type":"exact"},{"name":"thiamin pyrophosphate binding","type":"exact"}],"termid":"GO:0030976","terms_by_termid":{"GO:0030976":null}}


id: GO:0036516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dopaminergic neuron growth cone is directed to a specific target site in response to an attractive chemical signal.","definition_xrefs":["GOC:PARL","PMID:21106844","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemoattraction of axon","termid":"GO:0061642"},{"relation_name":"part_of","term_name":"dopaminergic neuron axon guidance","termid":"GO:0036514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of dopaminergic neuron axon","synonyms":[{"name":"chemoattraction of DA axon","type":"exact"},{"name":"chemoattraction of dopaminergic axon","type":"exact"}],"termid":"GO:0036516"}


id: PBO:0087552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP, nuclear RNase P and telomerase; forms a soluble heterodimer with Pop6p that binds P3 domain of RNase MRP and RNase P RNAs; RNase MRP cleaves pre-rRNA, nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs, while telomerase replenishes telomeric DNA","termid":"PBO:0087552"}


id: GO:0046512
data:
  {"annotated_genes":["SJAG_00880","SJAG_02305","SJAG_01057","SJAG_04178","SJAG_02706","SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88810,92975,93735,101665,102109,105858],"is_not":false,"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues.","definition_xrefs":["ISBN:0198506732","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingosine metabolic process","termid":"GO:0006670"},{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"sphingoid biosynthetic process","termid":"GO:0046520"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"sphingosine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sphingosine anabolism","type":"exact"},{"name":"sphingosine biosynthesis","type":"exact"},{"name":"sphingosine formation","type":"exact"},{"name":"sphingosine synthesis","type":"exact"}],"termid":"GO:0046512","terms_by_termid":{"GO:0046512":null}}


id: GO:0098911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a ventricular cardiac muscle cell contributing to the regulation of its contraction. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"regulates","term_name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ventricular cardiac muscle cell action potential","termid":"GO:0098911"}


id: GO:0072487
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residue at position 16. In human, it contains the catalytic subunit MOF, and MSL1, MSL2 and MSL3.","definition_xrefs":["PMID:20018852","PMID:16227571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"MSL complex","termid":"GO:0072487"}


id: GO:0018671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + NAD(P)H + H+ + O2 = 3,4-dihydroxybenzoate + NAD(P)+ + H2O.","definition_xrefs":["EC:1.14.13.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.14.13.33-RXN"],"synonyms":[{"name":"4-hydroxybenzoate 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxybenzoate 3-monooxygenase (reduced nicotinamide adenine dinucleotide (phosphate))","type":"exact"},{"name":"4-hydroxybenzoate,NAD(P)H:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"4-hydroxybenzoate-3-hydroxylase activity","type":"related"}],"termid":"GO:0018671"}


id: GO:0097523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA-RNA complex composed of RNA polymerase, template DNA, and an RNA transcript.","definition_xrefs":["GOC:cjm","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex","termid":"GO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transcription ternary complex","synonyms":[{"name":"transcription protein-DNA-RNA complex","type":"exact"}],"termid":"GO:0097523"}


id: PBO:0081797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 726 pseudogene 1","termid":"PBO:0081797"}


id: PBO:0027508
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_prospore_membrane","termid":"PBO:0027508"}


id: PBO:0062373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 15 pseudogene","termid":"PBO:0062373"}


id: PBO:0068891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 132, pseudogene","termid":"PBO:0068891"}


id: PBO:0038617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACE2 divergent transcript","termid":"PBO:0038617"}


id: FYPO:0003254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of arginine into the cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished amino acid import during vegetative growth","termid":"FYPO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished arginine import","synonyms":[{"name":"abolished L-arginine import across plasma membrane","type":"exact"},{"name":"abolished L-arginine import into cell","type":"exact"},{"name":"abolished arginine import during mitotic cell cycle","type":"related"},{"name":"abolished arginine import during vegetative growth","type":"exact"},{"name":"abolished arginine import into cell","type":"exact"},{"name":"abolished arginine uptake","type":"exact"},{"name":"arginine import abolished","type":"exact"}],"termid":"FYPO:0003254"}


