# terms

id: PBO:0062428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 89 pseudogene","termid":"PBO:0062428"}


id: GO:1905252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of epidermal growth factor receptor signaling pathway that is involved in heart process.","definition_xrefs":["GOC:bc","PMID:23069713","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of epidermal growth factor receptor signaling pathway involved in heart process (obsolete GO:1905252)","synonyms":[{"name":"regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"}],"termid":"GO:1905252"}


id: PBO:0003788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain","termid":"PBO:0003788"}


id: GO:0034330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction organization","synonyms":[{"name":"cell junction assembly and maintenance","type":"exact"},{"name":"cell junction biogenesis","type":"related"},{"name":"cell junction organisation","type":"exact"}],"termid":"GO:0034330"}


id: PBO:0049786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 21","termid":"PBO:0049786"}


id: PBO:0088131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; involved in vacuolar protein sorting; also detected in the mitochondria","termid":"PBO:0088131"}


id: PBO:0071142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 5","termid":"PBO:0071142"}


id: PBO:0058243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4530","termid":"PBO:0058243"}


id: PR:Q9HE15
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1399.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HE15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.04c","synonyms":[{"name":"Spom972h-SPAC1399.04c","type":"exact"},{"name":"UMP pyrophosphorylase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE15"}


id: PBO:0034603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiosis_II","termid":"PBO:0034603"}


id: PR:Q10323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphoceramide mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.11c","synonyms":[{"name":"IPC mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-imt3","type":"exact"}],"termid":"PR:Q10323"}


id: GO:0014855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of striated muscle cells, resulting in the expansion of a cell population. Striated muscles contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle.","definition_xrefs":["CL:0000737","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell proliferation","termid":"GO:0033002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell proliferation","termid":"GO:0014855"}


id: PBO:0028269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_nitric_oxide_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0028269"}


id: FYPO:0000723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to alkaline pH. Cells stop growing (and may die) at a pH that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to alkalinity","synonyms":[{"name":"alkaline pH resistance: decreased","type":"related"},{"name":"decreased growth during cellular response to alkalinity","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to alkalinity","type":"exact"},{"name":"hypersensitive to alkalinity","type":"exact"},{"name":"sensitive to alkalinity during mitotic cell cycle","type":"related"},{"name":"sensitive to alkalinity during vegetative growth","type":"exact"}],"termid":"FYPO:0000723"}


id: PBO:0085892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in secretion of proteins that lack classical secretory signal sequences; SWAT-GFP and mCherry fusion proteins localize to the cytosol","termid":"PBO:0085892"}


id: PBO:0060056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 3","termid":"PBO:0060056"}


id: PBO:0017605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid7 (predicted)","termid":"PBO:0017605"}


id: PBO:0005903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Alanine, mitochondrial","termid":"PBO:0005903"}


id: GO:1902246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cis-abienol.","definition_xrefs":["PMID:22672125","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"cis-abienol metabolic process","termid":"GO:1902244"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"cis-abienol biosynthetic process","synonyms":[{"name":"cis-abienol anabolism","type":"exact"},{"name":"cis-abienol biosynthesis","type":"exact"},{"name":"cis-abienol formation","type":"exact"},{"name":"cis-abienol synthesis","type":"exact"}],"termid":"GO:1902246"}


id: PR:O13800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rdl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rdl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.03c","synonyms":[{"name":"RAD51D-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rdl1","type":"exact"}],"termid":"PR:O13800"}


id: GO:1900386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of flavonol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of flavonoid biosynthetic process","termid":"GO:0009963"},{"relation_name":"is_a","term_name":"regulation of flavonol biosynthetic process","termid":"GO:1900384"},{"relation_name":"positively_regulates","term_name":"flavonol biosynthetic process","termid":"GO:0051555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flavonol biosynthetic process","synonyms":[{"name":"activation of flavonol biosynthetic process","type":"narrow"},{"name":"up regulation of flavonol biosynthetic process","type":"exact"},{"name":"up-regulation of flavonol biosynthetic process","type":"exact"},{"name":"upregulation of flavonol biosynthetic process","type":"exact"}],"termid":"GO:1900386"}


id: PBO:0058232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4521","termid":"PBO:0058232"}


id: PBO:0075668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 3","termid":"PBO:0075668"}


id: PBO:0044979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 32 (putative)","termid":"PBO:0044979"}


id: PBO:0087808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein (TBP); general transcription factor that interacts with other factors to form the preinitiation complex at promoters; essential for viability, highly conserved; yeast gene can complement mutations in human homolog TBP","termid":"PBO:0087808"}


id: PBO:0082324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle; protein abundance increases in response to DNA replication stress","termid":"PBO:0082324"}


id: PBO:0090586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR89 family","termid":"PBO:0090586"}


id: PBO:0072778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC1 like phosphatidylinositide phosphatase","termid":"PBO:0072778"}


id: PBO:0040367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 4","termid":"PBO:0040367"}


id: PBO:0038860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS like 5","termid":"PBO:0038860"}


id: GO:0090036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"protein kinase C signaling","termid":"GO:0070528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of protein kinase C signaling","synonyms":[{"name":"regulation of protein kinase C signaling cascade","type":"related"},{"name":"regulation of protein kinase C signalling cascade","type":"related"}],"termid":"GO:0090036"}


id: PBO:0054707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2116","termid":"PBO:0054707"}


id: PBO:0045571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 21","termid":"PBO:0045571"}


id: PBO:0068367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 150","termid":"PBO:0068367"}


id: PBO:0071143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 6","termid":"PBO:0071143"}


id: PBO:0084236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Imidazoleglycerol-phosphate dehydratase; catalyzes the sixth step in histidine biosynthesis; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts; transcription is regulated by general amino acid control via Gcn4p","termid":"PBO:0084236"}


id: FYPO:0002436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the orientation of actin cables within a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cables","termid":"FYPO:0002435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0004803"],"is_obsolete":false,"name":"misoriented actin cables","synonyms":[{"name":"abnormal actin cable orientation","type":"exact"},{"name":"abnormal formin-nucleated actin cable orientation","type":"exact"},{"name":"misoriented actin cables during mitotic cell cycle","type":"related"},{"name":"misoriented actin cables during vegetative growth","type":"exact"},{"name":"misoriented formin-nucleated actin cables","type":"exact"}],"termid":"FYPO:0002436"}


id: PBO:0062724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily A member 1","termid":"PBO:0062724"}


id: GO:0008533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds in substrates containing five or more amino acids, preferentially with Ala in P1', and Pro in P2'.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete astacin activity (obsolete GO:0008533)","synonyms":[{"name":"Astacus proteinase activity","type":"related"},{"name":"astacin activity","type":"exact"},{"name":"astacus proteinase activity","type":"narrow"},{"name":"crayfish small-molecule proteinase activity","type":"narrow"}],"termid":"GO:0008533"}


id: PBO:0052104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 7","termid":"PBO:0052104"}


id: RO:0002616
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_evidence_or_inference_to","termid":"RO:0002616"}


id: GO:0047000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-gluconate + NADP+ = (4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate + H+ + NADPH.","definition_xrefs":["RHEA:15109","EC:1.1.1.126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-gluconate 6-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01543","MetaCyc:RXN-13040"],"synonyms":[{"name":"2-dehydro-3-deoxy-D-gluconate:NADP+ 6-oxidoreductase activity","type":"related"},{"name":"2-keto-3-deoxy-D-gluconate dehydrogenase activity","type":"related"}],"termid":"GO:0047000"}


id: GO:0047765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: caldesmon phosphate + H2O = caldesmon + phosphate.","definition_xrefs":["EC:3.1.3.55"],"gene_count":0,"genotype_count":0,"name":"obsolete caldesmon-phosphatase activity (obsolete GO:0047765)","secondary_identifiers":["MetaCyc:CALDESMON-PHOSPHATASE-RXN"],"synonyms":[{"name":"SMP-I","type":"related"},{"name":"caldesmon-phosphate phosphohydrolase activity","type":"related"},{"name":"smooth muscle caldesmon phosphatase activity","type":"related"}],"termid":"GO:0047765"}


id: GO:0004315
data:
  {"annotated_genes":["SJAG_04972","SJAG_01946"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93761,108662],"is_not":false,"summary":null,"term":"GO:0004315"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-[acyl-carrier protein] + malonyl-[acyl-carrier protein] = 3-oxoacyl-[acyl-carrier protein] + CO2 + [acyl-carrier protein].","definition_xrefs":["RHEA:22836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01946":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033817","MetaCyc:3-OXOACYL-ACP-SYNTH-RXN","EC:2.3.1.41"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein synthase activity","type":"related"},{"name":"3-oxoacyl-ACP synthase activity","type":"exact"},{"name":"3-oxoacyl-[acyl-carrier protein] synthase activity","type":"exact"},{"name":"3-oxoacyl-acyl carrier protein synthase I activity","type":"narrow"},{"name":"3-oxoacyl-acyl-carrier-protein synthase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:malonyl-acyl-carrier-protein C-acyltransferase (decarboxylating)","type":"related"},{"name":"acyl-malonyl acyl carrier protein-condensing enzyme activity","type":"related"},{"name":"acyl-malonyl(acyl-carrier-protein)-condensing enzyme activity","type":"related"},{"name":"beta-ketoacyl acyl carrier protein synthase activity","type":"related"},{"name":"beta-ketoacyl synthetase activity","type":"related"},{"name":"beta-ketoacyl-ACP synthase I activity","type":"narrow"},{"name":"beta-ketoacyl-ACP synthase II activity","type":"narrow"},{"name":"beta-ketoacyl-ACP synthetase activity","type":"related"},{"name":"beta-ketoacyl-[acyl carrier protein] synthase activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein synthase activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein synthetase activity","type":"related"},{"name":"beta-ketoacyl-acyl-carrier-protein synthase I","type":"narrow"},{"name":"beta-ketoacyl-acyl-carrier-protein synthase II activity","type":"narrow"},{"name":"beta-ketoacylsynthase activity","type":"related"},{"name":"condensing enzyme activity","type":"broad"},{"name":"fatty acid condensing enzyme activity","type":"broad"},{"name":"ketoacyl-ACP synthase activity","type":"exact"}],"termid":"GO:0004315","terms_by_termid":{"GO:0004315":null}}


id: PBO:0073212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 4D","termid":"PBO:0073212"}


id: PBO:0113047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome linkage inner nuclear membrane protein; CLIP, involved in perinuclear chromosome tethering and rDNA repeat stability; enriched at telomeres and subtelomeric regions; associates with and regulates subtelomeric genes, interacting with TREX (transcription export) factors; produces two splice variants with different functions; alternative splicing of SRC1 pre-mRNA is promoted by Hub1p; mutant is aneuploidy tolerant; SRC1 has a paralog, HEH2, that arose from the whole genome duplication","termid":"PBO:0113047"}


id: GO:0070848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to growth factor","synonyms":[{"name":"response to growth factor stimulus","type":"exact"}],"termid":"GO:0070848"}


id: PBO:0028715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septation_index_in_stationary_phase","termid":"PBO:0028715"}


id: PBO:0063327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 3","termid":"PBO:0063327"}


id: PBO:0036303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThrE amino acid transmembrane transporter family protein","termid":"PBO:0036303"}


id: PATO:0005012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being fully formed compared to entities lacking parts.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complete structure","termid":"PATO:0005012"}


id: PBO:0049118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 183","termid":"PBO:0049118"}


id: GO:0062196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a lysosome.","definition_xrefs":["PMID:31314175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lysosome size","termid":"GO:0062196"}


id: PATO:0001179
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001179 immune (obsolete PATO:0001179)","termid":"PATO:0001179"}


id: GO:0047128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-reticuline + NADP+ = 1,2-dehydroreticuline + H+ + NADPH.","definition_xrefs":["EC:1.5.1.27","RHEA:17569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1,2-dehydroreticulinium reductase (NADPH) activity","secondary_identifiers":["KEGG_REACTION:R04695","MetaCyc:1.5.1.27-RXN"],"synonyms":[{"name":"(R)-reticuline:NADP+ oxidoreductase activity","type":"related"},{"name":"1,2-dehydroreticulinium ion reductase activity","type":"related"}],"termid":"GO:0047128"}


id: GO:0030354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of melanin-concentrating hormone, a cyclic peptide hormone that, upon receptor binding, induces melanin aggregation in melanocytes, and is also involved in regulating food intake and energy balance in mammals.","definition_xrefs":["PMID:11416225","GOC:mah","PMID:9792536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"melanin-concentrating hormone activity","termid":"GO:0030354"}


id: PR:P00332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alcohol dehydrogenase, propanol-preferring that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.01","secondary_identifiers":["UniProtKB:P00332"],"synonyms":[{"name":"Spom972h-adhP","type":"exact"}],"termid":"PR:P00332"}


id: PBO:0014311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis Dph7 (predicted)","termid":"PBO:0014311"}


id: FYPO:0007528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of binding to a lipid in a membrane by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:33172987","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal lipid binding","termid":"FYPO:0006942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal membrane lipid binding","synonyms":[{"name":"normal binding to lipid in membrane","type":"exact"}],"termid":"FYPO:0007528"}


id: GO:1905388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a beta-carotene stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:16771696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to beta-carotene","termid":"GO:1905387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to beta-carotene","synonyms":[{"name":"cellular response to beta,beta-carotene","type":"exact"}],"termid":"GO:1905388"}


id: PBO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-b (predicted)","termid":"PBO:0002372"}


id: GO:0047055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-reticuline + [reduced NADPH--hemoprotein reductase] + O2 -> salutaridine + [oxidized NADPH--hemoprotein reductase] + 2 H2O.","definition_xrefs":["RHEA:17713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"salutaridine synthase activity","secondary_identifiers":["KEGG_REACTION:R04696","MetaCyc:1.1.3.35-RXN","EC:1.14.19.67"],"synonyms":[{"name":"(R)-reticuline oxidase (C-C phenol-coupling) activity","type":"related"}],"termid":"GO:0047055"}


id: FYPO:0003130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which entry into the G1 phase of the mitotic cell cycle (exit from mitosis) begins earlier than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic G1 phase entry","termid":"FYPO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"premature mitotic G1 phase entry during cellular response to ionizing radiation","synonyms":[{"name":"accelerated entry into G1 during cellular response to ionizing radiation","type":"related"},{"name":"advanced mitotic G1 phase entry during cellular response to ionizing radiation","type":"exact"},{"name":"mitotic cell cycle advance in G1 during cellular response to ionizing radiation","type":"related"},{"name":"premature G1 phase entry during cellular response to ionizing radiation during mitotic cell cycle","type":"exact"},{"name":"premature exit from mitosis during cellular response to ionizing radiation","type":"exact"},{"name":"premature mitotic G1 phase entry during cellular response to IR","type":"exact"},{"name":"premature mitotic G1 phase entry during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"premature mitotic G1 progression during cellular response to ionizing radiation","type":"related"}],"termid":"FYPO:0003130"}


id: PBO:0044189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsinogen B2","termid":"PBO:0044189"}


id: PBO:0012038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, involved in ribosomal large subunit biogenesis (predicted)","termid":"PBO:0012038"}


id: PBO:0049491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 1","termid":"PBO:0049491"}


id: PBO:0086215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to Fpr1p; confers rapamycin resistance by competing with rapamycin for Fpr1p binding; accumulates in the nucleus upon treatment of cells with rapamycin; has similarity to D. melanogaster shuttle craft and human NFX1","termid":"PBO:0086215"}


id: PBO:0042655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 4","termid":"PBO:0042655"}


id: PBO:0050576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 1","termid":"PBO:0050576"}


id: PBO:0071286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 9","termid":"PBO:0071286"}


id: PBO:0071131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 133","termid":"PBO:0071131"}


id: PR:Q09878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC584.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase [NADPH] flavoprotein component (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.01c","synonyms":[{"name":"Spom972h-SPCC584.01c","type":"exact"}],"termid":"PR:Q09878"}


id: GO:0071652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-C motif) ligand 1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 1 production","termid":"GO:0071610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"regulation of CCL1 production","type":"exact"},{"name":"regulation of T cell activation 3 production","type":"exact"},{"name":"regulation of TCA-3 production","type":"exact"}],"termid":"GO:0071652"}


id: GO:0034179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 13 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 13 signaling pathway","termid":"GO:0034178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 13 signaling pathway","synonyms":[{"name":"regulation of TLR13 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 13 signalling pathway","type":"exact"}],"termid":"GO:0034179"}


id: PBO:0050535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietic prostaglandin D synthase","termid":"PBO:0050535"}


id: GO:0031948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid metabolic process","termid":"GO:0031945"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid biosynthetic process","termid":"GO:0031946"},{"relation_name":"is_a","term_name":"positive regulation of steroid hormone biosynthetic process","termid":"GO:0090031"},{"relation_name":"positively_regulates","term_name":"glucocorticoid biosynthetic process","termid":"GO:0006704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of glucocorticoid biosynthetic process","synonyms":[{"name":"activation of glucocorticoid biosynthetic process","type":"narrow"},{"name":"stimulation of glucocorticoid biosynthetic process","type":"narrow"},{"name":"up regulation of glucocorticoid biosynthetic process","type":"exact"},{"name":"up-regulation of glucocorticoid biosynthetic process","type":"exact"},{"name":"upregulation of glucocorticoid biosynthetic process","type":"exact"}],"termid":"GO:0031948"}


id: PBO:0045588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 3","termid":"PBO:0045588"}


id: PBO:0086581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant is fluconazole resistant and has long chronological lifespan","termid":"PBO:0086581"}


id: GO:0008143
data:
  {"annotated_genes":["SJAG_02808","SJAG_01910","SJAG_01650","SJAG_00425","SJAG_03214","SJAG_03448","SJAG_04271","SJAG_03283","SJAG_01222","SJAG_03747","SJAG_04601","SJAG_04427"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72079,73574,85117,85480,85519,87959,93186,93617,94596,100426,103862,105346],"is_not":false,"summary":null,"term":"GO:0008143"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-purine tract binding","termid":"GO:0070717"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_01222":null,"SJAG_01650":null,"SJAG_01910":null,"SJAG_02808":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03747":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"poly(A) binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(A) binding, within an RNA molecule","type":"exact"},{"name":"poly(rA) binding","type":"exact"},{"name":"poly-A binding","type":"exact"},{"name":"polyadenylate binding","type":"exact"}],"termid":"GO:0008143","terms_by_termid":{"GO:0008143":null}}


id: GO:2001031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular glucuronidation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of cellular glucuronidation","termid":"GO:2001029"},{"relation_name":"positively_regulates","term_name":"cellular glucuronidation","termid":"GO:0052695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellular glucuronidation","synonyms":[{"name":"positive regulation of cellular glucuronide biosynthesis","type":"exact"},{"name":"positive regulation of cellular glucuronide biosynthetic process","type":"exact"},{"name":"positive regulation of cellular glucuronoside biosynthesis","type":"exact"},{"name":"positive regulation of cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:2001031"}


id: MOD:01025
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-bromo-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated tyrosine","termid":"MOD:01000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-bromo-L-tyrosine","synonyms":[{"name":"3'-BrTyr","type":"exact"}],"termid":"MOD:01025"}


id: GO:1900422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of cellular alcohol catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:3305157","PMID:8221926","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900422)","synonyms":[{"name":"activation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900422"}


id: GO:0150107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell-cell junction.","definition_xrefs":["GOC:bc","PMID:26706435","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell-cell junction","termid":"GO:0150106"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell-cell junction","termid":"GO:0150107"}


id: PATO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior to","synonyms":[{"name":"preceding","type":"exact"},{"name":"ventral_to","type":"exact"}],"termid":"PATO:0001632"}


id: PBO:0058532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6077","termid":"PBO:0058532"}


id: GO:0098986
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A T-shaped presynpatic density. These are common in arhropod central nervous systems.","definition_xrefs":["GOC:dos","PMID:26780543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic density","termid":"GO:0098980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"T-bar","termid":"GO:0098986"}


id: GO:1900634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentadecane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane biosynthetic process","termid":"GO:0043447"},{"relation_name":"is_a","term_name":"pentadecane metabolic process","termid":"GO:1900633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentadecane biosynthetic process","synonyms":[{"name":"pentadecane anabolism","type":"exact"},{"name":"pentadecane biosynthesis","type":"exact"},{"name":"pentadecane formation","type":"exact"},{"name":"pentadecane synthesis","type":"exact"}],"termid":"GO:1900634"}


id: PBO:0075921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 13","termid":"PBO:0075921"}


id: PBO:0043324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 2","termid":"PBO:0043324"}


id: GO:0035915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components by an organism to form a pore complex in a membrane of another organism.","definition_xrefs":["GOC:fj","PMID:21549739","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of plasma membrane integrity in another organism","termid":"GO:0051673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pore formation in membrane of another organism","synonyms":[{"name":"pore complex assembly in other organism","type":"exact"},{"name":"pore complex biogenesis in other organism","type":"exact"},{"name":"pore formation in membrane of other organism","type":"exact"},{"name":"pore formation in other organism","type":"exact"},{"name":"pore-forming toxin activity","type":"related"}],"termid":"GO:0035915"}


id: GO:1901725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone deacetylase activity.","definition_xrefs":["GOC:rl","PMID:20497126","GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone deacetylase activity (obsolete GO:1901725)","termid":"GO:1901725"}


id: GO:0033880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phenylglyoxylyl-CoA = CoA + H+ + phenylglyoxylate.","definition_xrefs":["EC:3.1.2.25","RHEA:15337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phenylacetyl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:3.1.2.25-RXN","KEGG_REACTION:R07294"],"synonyms":[{"name":"phenylglyoxylyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0033880"}


id: FYPO:0005880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are longer than normal and are curved, i.e. follow a smooth bend rather than a straight line, and extend around one or both ends of the cell, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:14663827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long curved interphase microtubules","termid":"FYPO:0004511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"long interphase microtubules curved around cell end","synonyms":[{"name":"elongated interphase microtubules curved around cell end","type":"exact"},{"name":"long cytoplasmic microtubules curved around cell end during interphase of mitotic cell cycle","type":"exact"},{"name":"long cytoplasmic microtubules curved around cell end during mitotic interphase","type":"exact"},{"name":"long interphase cytoplasmic microtubules curved around cell end","type":"exact"},{"name":"long interphase microtubules curved around cell end during vegetative growth","type":"exact"},{"name":"long interphase microtubules curved around cell tip","type":"exact"}],"termid":"FYPO:0005880"}


id: PBO:0044031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan family member 4B, pseudogene","termid":"PBO:0044031"}


id: GO:0075010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of germ tube formation on or near host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"germ tube formation","termid":"GO:0075009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of germ tube formation","termid":"GO:0075010"}


id: PBO:0091721
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure update","termid":"PBO:0091721"}


id: PBO:0074185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 6","termid":"PBO:0074185"}


id: GO:0033533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving verbascose, the pentasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"verbascose metabolic process","synonyms":[{"name":"verbascose metabolism","type":"exact"}],"termid":"GO:0033533"}


id: PBO:0065442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC2 pseudogene 1","termid":"PBO:0065442"}


id: GO:0060527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The branching morphogenesis process in which the prostate epithelial cords branch freely to create the structure of the prostate acini.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in prostate gland morphogenesis","termid":"GO:0060442"},{"relation_name":"part_of","term_name":"prostate glandular acinus morphogenesis","termid":"GO:0060526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis","termid":"GO:0060527"}


id: GO:0044097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of proteins or DNA by a cell, via the type IV secretion system.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"secretion by the type IV secretion system","synonyms":[{"name":"secretion via the type IV secretion system","type":"exact"}],"termid":"GO:0044097"}


id: GO:0010333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"terpene synthase activity","termid":"GO:0010333"}


id: GO:0071038
data:
  {"annotated_genes":["SJAG_03984","SJAG_01818","SJAG_04321","SJAG_03179","SJAG_04824","SJAG_03745","SJAG_00854","SJAG_04084","SJAG_04153","SJAG_04006","SJAG_01521","SJAG_04818","SJAG_01191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88278,89108,91977,93326,98181,100527,101385,102592,103599,109435,111621,112065,114487],"is_not":false,"summary":null,"term":"GO:0071038"}]},"cv_name":"biological_process","definition":"A nuclear tRNA surveillance pathway, dependent on the TRAMP exosome adaptor and the nuclear exosome.","definition_xrefs":["GOC:vw","PMID:35901126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"is_a","term_name":"tRNA surveillance","termid":"GO:0106354"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"TRAMP-dependent tRNA surveillance pathway","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071038","terms_by_termid":{"GO:0071038":null}}


id: PBO:0042821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 1 pseudogene 1","termid":"PBO:0042821"}


id: PBO:0066469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C 5 pseudogene 1","termid":"PBO:0066469"}


id: PBO:0086176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the normal accumulation of 25S and 5.8S rRNAs; nucleolar protein; associated with the 27SA2 pre-ribosomal particle; proposed to be involved in the biogenesis of the 60S ribosomal subunit","termid":"PBO:0086176"}


id: PBO:0078738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 1 like","termid":"PBO:0078738"}


id: GO:0070803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of metula development, a process that leads to the formation of metulae. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of metula development","termid":"GO:0070802"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"metula development","termid":"GO:0070789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metula development","termid":"GO:0070803"}


id: GO:0061833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a tricellular tight junction.","definition_xrefs":["PMID:24889144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to tricellular tight junction","termid":"GO:0061833"}


id: _global:involved_in_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"involved_in_or_involved_in_regulation_of","termid":"_global:involved_in_or_involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_regulation_of","secondary_identifiers":["RO:0002428"],"termid":"_global:involved_in_regulation_of"}


id: PBO:0113497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4G and scaffold protein; subunit of the mRNA cap-binding protein complex (eIF4F) with eIF4E (Cdc33p) and eIF4A (Tif1p/Tif2p); stimulates the ATPase and helicase activities of eIF4A synergistically with eIF4G; required with eIF4E for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; association with Pab1p mediates poly(A) tail-stimulated translation; role in assembly of PET region in biogenesis of 60S ribosomal subunit","termid":"PBO:0113497"}


id: PBO:0029986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ubiquitin_ligase_activity","termid":"PBO:0029986"}


id: PBO:0078166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta constant 1","termid":"PBO:0078166"}


id: PBO:0075248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18","termid":"PBO:0075248"}


id: PBO:0061636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT16 divergent transcript","termid":"PBO:0061636"}


id: GO:0019288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["GOC:go_curators","MetaCyc:NONMEVIPP-PWY","PMID:18948055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopentenyl diphosphate biosynthetic process","termid":"GO:0009240"},{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","synonyms":[{"name":"isopentenyl diphosphate anabolism, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthesis, mevalonate-independent","type":"exact"},{"name":"isopentenyl diphosphate biosynthesis, non-mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, MEP pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, non-mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate formation, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate synthesis, mevalonate-independent pathway","type":"exact"},{"name":"mevalonate-independent isopentenyl diphosphate biosynthesis","type":"exact"},{"name":"mevalonate-independent isopentenyl diphosphate biosynthetic process","type":"exact"},{"name":"non-MVA pathway","type":"exact"}],"termid":"GO:0019288"}


id: MOD:01750
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01750"}


id: PBO:0048328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 39","termid":"PBO:0048328"}


id: GO:2001156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of amine catabolic process","termid":"GO:0033241"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"regulates","term_name":"proline catabolic process to glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of proline catabolic process to glutamate","synonyms":[{"name":"regulation of proline breakdown to glutamate","type":"exact"},{"name":"regulation of proline degradation to glutamate","type":"exact"},{"name":"regulation of proline oxidation","type":"related"}],"termid":"GO:2001156"}


id: PBO:0053941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1242","termid":"PBO:0053941"}


id: PBO:0063815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHLDA1 antisense RNA 1","termid":"PBO:0063815"}


id: PBO:0025448
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-Acetylglutamate Synthetase deficiency","termid":"PBO:0025448"}


id: GO:0032589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a neuron projection.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"neuron projection membrane","termid":"GO:0032589"}


id: PBO:0070156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 70 pseudogene","termid":"PBO:0070156"}


id: GO:0043034
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix.","definition_xrefs":["GOC:jl","GOC:mtg_muscle","PMID:6405378","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"costamere","secondary_identifiers":["Wikipedia:Costamere"],"termid":"GO:0043034"}


id: GO:0061683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the seminal vesicle is generated and organized. A branch is a division or offshoot from a main stem.","definition_xrefs":["PMID:16916376","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"seminal vesicle epithelium development","termid":"GO:0061108"},{"relation_name":"part_of","term_name":"seminal vesicle morphogenesis","termid":"GO:0061682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in seminal vesicle morphogenesis","synonyms":[{"name":"gonecyst branching morphogenesis","type":"exact"},{"name":"seminal gland branching morphogenesis","type":"exact"},{"name":"seminal vesicle branching","type":"exact"},{"name":"seminal vesicle branching morphogenesis","type":"exact"}],"termid":"GO:0061683"}


id: GO:0051417
data:
  {"annotated_genes":["SJAG_07018","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97078,114847],"is_not":false,"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, mediated by the spindle pole body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03540":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"microtubule nucleation by spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SPB-mediated microtubule nucleation","type":"exact"},{"name":"microtubule nucleation by SPB","type":"exact"},{"name":"spindle pole body-mediated microtubule nucleation","type":"exact"}],"termid":"GO:0051417","terms_by_termid":{"GO:0051417":null}}


id: GO:0034653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of retinoic acid, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"fat-soluble vitamin catabolic process","termid":"GO:0042363"},{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0044248","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"retinoic acid catabolic process","synonyms":[{"name":"retinoic acid breakdown","type":"exact"},{"name":"retinoic acid catabolism","type":"exact"},{"name":"retinoic acid degradation","type":"exact"},{"name":"vitamin A1 acid catabolic process","type":"exact"}],"termid":"GO:0034653"}


id: PBO:0086910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative X-Pro aminopeptidase; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YFR006W is not an essential gene","termid":"PBO:0086910"}


id: PBO:0058368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4740","termid":"PBO:0058368"}


id: GO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + UDP-D-glucose = a flavanone 7-O-beta-D-glucoside + UDP.","definition_xrefs":["MetaCyc:2.4.1.185-RXN","EC:2.4.1.185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"flavanone 7-O-beta-glucosyltransferase activity","synonyms":[{"name":"UDP-glucose:flavanone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:flavanone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"hesperetin 7-O-glucosyl-transferase activity","type":"related"},{"name":"naringenin 7-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-flavanone 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047243"}


id: PBO:0088765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone, gankyrin","termid":"PBO:0088765"}


id: PBO:0090065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA polymerase specificity factor, predicted rRNA methyltransferase Mtf1","termid":"PBO:0090065"}


id: PBO:0062977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein nuclear 1","termid":"PBO:0062977"}


id: GO:0046671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the retina.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of retinal cell programmed cell death","termid":"GO:0046668"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"retinal cell programmed cell death","termid":"GO:0046666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cell programmed cell death","synonyms":[{"name":"down regulation of retinal programmed cell death","type":"exact"},{"name":"down-regulation of retinal programmed cell death","type":"exact"},{"name":"downregulation of retinal programmed cell death","type":"exact"},{"name":"inhibition of retinal programmed cell death","type":"narrow"},{"name":"negative regulation of retinal programmed cell death","type":"exact"}],"termid":"GO:0046671"}


id: PBO:0042423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 7","termid":"PBO:0042423"}


id: GO:1902501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any HOPS complex that is part of a lysosomal membrane.","definition_xrefs":["GOC:TermGenie","PMID:23645161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar HOPS complex","termid":"GO:1902500"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"lysosomal HOPS complex","synonyms":[{"name":"lysosomal membrane HOPS complex","type":"exact"}],"termid":"GO:1902501"}


id: PBO:0050935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 5","termid":"PBO:0050935"}


id: PBO:0082349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; has strong preference for dsRNA; remodels RNA-protein complex (RNP) to facilitate efficient transcription termination ; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites","termid":"PBO:0082349"}


id: PBO:0039550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD44 intronic transcript 1","termid":"PBO:0039550"}


id: GO:0052633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-aconitate + H2O = isocitrate.","definition_xrefs":["GOC:vw","EC:4.2.1.3","GOC:pde","MetaCyc:ACONITATEHYDR-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete isocitrate hydro-lyase (cis-aconitate-forming) activity (obsolete GO:0052633)","synonyms":[{"name":"aconitate hydratase activity","type":"broad"},{"name":"cis-aconitase activity","type":"broad"},{"name":"citrate hydro-lyase activity","type":"broad"},{"name":"citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"broad"},{"name":"citrate(isocitrate) hydro-lyase activity","type":"broad"}],"termid":"GO:0052633"}


id: PBO:0056961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 22","termid":"PBO:0056961"}


id: GO:1904324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["GO_REF:0000058","PMID:15937517","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of inhibitory G protein-coupled receptor phosphorylation","termid":"GO:1904323"},{"relation_name":"negatively_regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"down regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"down-regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"downregulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"inhibition of inhibitory G-protein coupled receptor phosphorylation","type":"narrow"},{"name":"negative regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904324"}


id: GO:1905902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm formation.","definition_xrefs":["GOC:BHF_miRNA","PMID:23939491","GOC:TermGenie","GOC:rph","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"mesoderm formation","termid":"GO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesoderm formation","termid":"GO:1905902"}


id: PBO:0046751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 5 pseudogene 1","termid":"PBO:0046751"}


id: GO:0042490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system.","definition_xrefs":["GOC:jl","CL:0000199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanoreceptor differentiation","termid":"GO:0042490"}


id: PBO:0052909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-1","termid":"PBO:0052909"}


id: PBO:0003931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48-Npl4-Ufd1 complex component Npl4 (predicted)","termid":"PBO:0003931"}


id: PBO:0076123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 5L","termid":"PBO:0076123"}


id: PBO:0070322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 11","termid":"PBO:0070322"}


id: PBO:0050166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 22","termid":"PBO:0050166"}


id: PBO:0091484
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ris-Related Protein 1","termid":"PBO:0091484"}


id: PBO:0083531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SNX41","termid":"PBO:0083531"}


id: PBO:0087943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor eIF-5A; required for translation of proteins containing polyproline stretches, including Bni1p, and this leads to a requirement for mating projection formation; structural homolog of bacterial EF-P; undergoes an essential hypusination modification; HYP2 has a paralog, ANB1, that arose from the whole genome duplication; human EIF5A complements the inviability of the yeast hyp2 anb1 double null mutant","termid":"PBO:0087943"}


id: PBO:0036243
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli PyrB","termid":"PBO:0036243"}


id: PBO:0079171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1","termid":"PBO:0079171"}


id: FYPO:0008069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at the mating type locus is observed over an increased portion of the mating-type region.","definition_xrefs":["PMID:18030666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at mating type locus during vegetative growth","termid":"FYPO:0005065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased spatial extent of histone H3-K9 methylation at mating type locus during vegetative growth","termid":"FYPO:0008069"}


id: PBO:0067773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 73","termid":"PBO:0067773"}


id: PBO:0004856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn13a","termid":"PBO:0004856"}


id: PBO:0046255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 4","termid":"PBO:0046255"}


id: GO:0039592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the progression of the host mitotic cell cycle from G2 phase to M phase, leading to arrest in G2 phase. The arrest in G2/M allows some viruses to replicate their genome before cells enter mitosis. Alternatively, it can inhibit the antiviral immune response by preventing the clonal expansion of infected lymphocytes.","definition_xrefs":["PMID:9882364","PMID:10946289","PMID:12208959","VZ:876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cell cycle progression","termid":"GO:0044071"},{"relation_name":"negatively_regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"},{"relation_name":"regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0044772","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated arrest of host cell cycle during G2/M transition","synonyms":[{"name":"host G2/M cell cycle arrest by virus","type":"narrow"},{"name":"perturbation by virus of G2/M transition of host mitotic cell cycle","type":"narrow"},{"name":"suppression by virus of G2/M transition of host mitotic cell cycle","type":"narrow"}],"termid":"GO:0039592"}


id: PBO:0029217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat","termid":"PBO:0029217"}


id: PBO:0054069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1416","termid":"PBO:0054069"}


id: PBO:0049715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 3","termid":"PBO:0049715"}


id: PBO:0081721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF649 antisense RNA 1","termid":"PBO:0081721"}


id: PBO:0047528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 2","termid":"PBO:0047528"}


id: SO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A P-element is a DNA transposon responsible for hybrid dysgenesis. P elements in this terminal inverted repeat (TIR) transposon superfamily have 31 bp perfect TIR and upon insertion duplicate an 8 bp sequence. It contains transposase that may lack the DDE domain.","definition_xrefs":["SO:ke","PMID:6309410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P_TIR_transposon","synonyms":[{"name":"DTP transposon","type":"exact"},{"name":"P TIR transposon","type":"exact"},{"name":"P element","type":"exact"},{"name":"P transposable element","type":"exact"},{"name":"P-element","type":"exact"}],"termid":"SO:0001535"}


id: PBO:0056680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEF2C antisense RNA 2","termid":"PBO:0056680"}


id: PBO:0052263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 3A","termid":"PBO:0052263"}


id: PBO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Cps3","termid":"PBO:0002068"}


id: PBO:0078771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-3","termid":"PBO:0078771"}


id: FYPO:0007000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a normal (i.e. indistinguishable from wild type) extent at transposable elements. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["GO:0005721","PomBase:mah","PMID:26518661","GO:0043486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone exchange at transposable element","synonyms":[{"name":"normal histone exchange at transposable element during mitotic cell cycle","type":"related"},{"name":"normal histone exchange at transposable element during vegetative growth","type":"exact"},{"name":"normal histone exchange at transposon","type":"exact"}],"termid":"FYPO:0007000"}


id: PBO:0058791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7160","termid":"PBO:0058791"}


id: PBO:0004188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex B box binding subunit Sfc3","termid":"PBO:0004188"}


id: GO:1902202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte growth factor receptor signaling pathway.","definition_xrefs":["PMID:18819921","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"hepatocyte growth factor receptor signaling pathway","termid":"GO:0048012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of hepatocyte growth factor receptor signaling pathway","synonyms":[{"name":"regulation of HGF receptor signaling pathway","type":"exact"},{"name":"regulation of HGF receptor signalling pathway","type":"exact"},{"name":"regulation of Met signaling pathway","type":"narrow"}],"termid":"GO:1902202"}


id: PBO:0027546
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_mitochondria","termid":"PBO:0027546"}


id: GO:0032374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"regulates","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of cholesterol transport","termid":"GO:0032374"}


id: PBO:0083990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione-dependent oxidoreductase; hydroperoxide and superoxide-radical responsive monothiol glutaredoxin subfamily member with Grx4p and Grx5p; redundantly protects cells from oxidative damage along with GRX4 and GRX5; with Grx4p, promotes the dissociation of Aft1p from iron regulon gene promoters and subsequent nuclear export in iron-replete conditions, regulating iron homeostasis; involved with Grx4p in the deglutathionylation of Sir2p, restoring deacetylase activity after disulfide stress","termid":"PBO:0083990"}


id: PBO:0088315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQC complex ubiquitin-protein ligase E3 Rkr1","termid":"PBO:0088315"}


id: GO:0032393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"MHC class I receptor activity","synonyms":[{"name":"T cell receptor activity","type":"related"},{"name":"alpha-beta T cell receptor activity","type":"related"},{"name":"gamma-delta T cell receptor activity","type":"related"}],"termid":"GO:0032393"}


id: FYPO:0007056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of substances via vesicles from the Golgi to other parts of the cell is abnormal..","definition_xrefs":["PomBase:mah","GO:0006892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal post-Golgi vesicle-mediated transport","synonyms":[{"name":"abnormal exit from TGN","type":"exact"},{"name":"abnormal post-Golgi transport","type":"exact"},{"name":"abnormal post-Golgi vesicle-mediated transport during mitotic cell cycle","type":"related"},{"name":"abnormal post-Golgi vesicle-mediated transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007056"}


id: GO:1990402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the embryonic phase whose specific outcome is the progression of the liver over time, from its formation to the mature structure.","definition_xrefs":["PMID:15918910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic liver development","termid":"GO:1990402"}


id: PBO:0066546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 9 binding protein","termid":"PBO:0066546"}


id: GO:0005861
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of accessory proteins (typically troponin T, troponin I and troponin C) found associated with actin in muscle thin filaments; involved in calcium regulation of muscle contraction.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"striated muscle thin filament","termid":"GO:0005865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"troponin complex","termid":"GO:0005861"}


id: GO:2000822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of behavioral fear response.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"is_a","term_name":"regulation of fear response","termid":"GO:1903365"},{"relation_name":"regulates","term_name":"behavioral fear response","termid":"GO:0001662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of behavioral fear response","synonyms":[{"name":"regulation of behavioural fear response","type":"exact"}],"termid":"GO:2000822"}


id: PBO:0005723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup186","termid":"PBO:0005723"}


id: GO:1901818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-zeacarotene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00805","PMID:3710717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"beta-zeacarotene metabolic process","termid":"GO:1901816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-zeacarotene biosynthetic process","synonyms":[{"name":"beta-zeacarotene anabolism","type":"exact"},{"name":"beta-zeacarotene biosynthesis","type":"exact"},{"name":"beta-zeacarotene formation","type":"exact"},{"name":"beta-zeacarotene synthesis","type":"exact"}],"termid":"GO:1901818"}


id: PBO:0027012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_catalytic_activity","termid":"PBO:0027012"}


id: GO:1904961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the quiescent center. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GO_REF:0000084","PMID:21233333","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quiescent center organization","synonyms":[{"name":"quiescent center structural organization","type":"exact"}],"termid":"GO:1904961"}


id: GO:0044585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cellobiose, a disaccharide that represents the basic repeating unit of cellulose.","definition_xrefs":["GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cellobiose binding","termid":"GO:0044585"}


id: GO:0008350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete kinetochore motor activity (obsolete GO:0008350)","synonyms":[{"name":"kinetochore motor activity","type":"exact"}],"termid":"GO:0008350"}


id: PBO:0039703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin and PNKP like factor","termid":"PBO:0039703"}


id: GO:0051351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of ligase activity","termid":"GO:0051340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ligase activity","synonyms":[{"name":"activation of ligase activity","type":"narrow"},{"name":"ligase activator","type":"exact"},{"name":"stimulation of ligase activity","type":"narrow"},{"name":"up regulation of ligase activity","type":"exact"},{"name":"up-regulation of ligase activity","type":"exact"},{"name":"upregulation of ligase activity","type":"exact"}],"termid":"GO:0051351"}


id: PBO:0005516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B alpha subunit (predicted)","termid":"PBO:0005516"}


id: PBO:0047344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphatase 2","termid":"PBO:0047344"}


id: PBO:0048551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-fructose oxidoreductase domain containing 1","termid":"PBO:0048551"}


id: PBO:0080881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPEL5 pseudogene 1","termid":"PBO:0080881"}


id: GO:0097392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 16 (CXCL16) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 16 production","synonyms":[{"name":"CXCL16 production","type":"exact"}],"termid":"GO:0097392"}


id: GO:0044669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sodium(out)+ galactoside(out) = sodium(in) + galactoside(in).","definition_xrefs":["GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium:galactoside symporter activity","termid":"GO:0044669"}


id: GO:0015984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of noncoupled solute translocation or facilitated diffusion.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete uniport (obsolete GO:0015984)","synonyms":[{"name":"uniport","type":"exact"}],"termid":"GO:0015984"}


id: PBO:0049494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 1","termid":"PBO:0049494"}


id: PR:O13370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase Pl10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase ded1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.11","secondary_identifiers":["UniProtKB:O13370"],"synonyms":[{"name":"SPCC1795.11","type":"related"},{"name":"Spom972h-D1Pas1","type":"exact"},{"name":"dep1","type":"related"},{"name":"moc2","type":"related"},{"name":"multicopy suppressor of overexpressed cyr1 protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sum3","type":"related"}],"termid":"PR:O13370"}


id: FYPO:0002260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which L-glutamate import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal glutamate import","synonyms":[{"name":"normal L-glutamate import across plasma membrane","type":"exact"},{"name":"normal L-glutamic acid import","type":"exact"},{"name":"normal glutamate import during mitotic cell cycle","type":"related"},{"name":"normal glutamate import during vegetative growth","type":"exact"},{"name":"normal glutamate import into cell","type":"exact"},{"name":"normal glutamate uptake","type":"exact"},{"name":"normal glutamic acid import","type":"exact"}],"termid":"FYPO:0002260"}


id: GO:0160120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrial complex that catalyzes the oxidative decarboxylation of branched-chain alpha-keto acids derived from L-leucine, L-isoleucine, and L-valine to branched-chain acyl-CoAs. The complex is organized around a 24-meric cubic core of the dihydrolipoyl transacylase (E2) with multiple (about 6 to 12) copies of the branched-chain alpha-ketoacid dehydrogenase (E1, consisting of alpha and beta subunits), about 6 copies of the dimeric dihydrolipoyl dehydrogenase (E3), and a small number of copies of the E1-specific kinase and phosphatase.","definition_xrefs":["PMID:10745006","PMID:3593587","PMID:9582350"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial branched-chain alpha-keto acid dehydrogenase complex (obsolete GO:0160120)","synonyms":[{"name":"BCKD complex","type":"exact"}],"termid":"GO:0160120"}


id: GO:0010312
data:
  {"annotated_genes":["SJAG_01803","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89809,89810],"is_not":false,"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of zinc ion. These include transport of zinc away from sensitive areas and to compartments or complexes whose purpose is sequestration of zinc ion.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"stress response to zinc ion","termid":"GO:1990359"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of zinc ion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010312","terms_by_termid":{"GO:0010312":null}}


id: PBO:0056803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 1 pseudogene 1","termid":"PBO:0056803"}


id: PBO:0028744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0028744"}


id: GO:0060123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of growth hormone from a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"growth hormone secretion","termid":"GO:0030252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of growth hormone secretion","termid":"GO:0060123"}


id: GO:0072319
data:
  {"annotated_genes":["SJAG_05296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"}]},"cv_name":"biological_process","definition":"A protein depolymerization process that results in the disassembly of vesicle coat proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"vesicle uncoating","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vesicle coat disassembly","type":"exact"}],"termid":"GO:0072319","terms_by_termid":{"GO:0072318":null}}


id: PBO:0015230
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(3)","termid":"PBO:0015230"}


id: FYPO:0002022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, and structure of actin cortical patches are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal actin cortical patch morphology","synonyms":[{"name":"normal F-actin patch morphology","type":"exact"},{"name":"normal actin cortical patch morphology during mitotic cell cycle","type":"related"},{"name":"normal actin cortical patch morphology during vegetative growth","type":"exact"},{"name":"normal actin patch morphology","type":"exact"}],"termid":"FYPO:0002022"}


id: PBO:0067495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 630, pseudogene","termid":"PBO:0067495"}


id: PBO:0069285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 541, pseudogene","termid":"PBO:0069285"}


id: PBO:0067914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 216","termid":"PBO:0067914"}


id: PBO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit 7a (predicted)","termid":"PBO:0002789"}


id: PBO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.24","termid":"PBO:0001726"}


id: SO:0000813
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA invalidated clone by partial processing.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_partial_processing","termid":"SO:0000416"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially_processed_cDNA_clone","synonyms":[{"name":"partially processed cDNA clone","type":"exact"}],"termid":"SO:0000813"}


id: PBO:0029604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transporter_activity","termid":"PBO:0029604"}


id: PBO:0038293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_rescued_phenotype_extension","termid":"PBO:0038293"}


id: PBO:0053880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1159","termid":"PBO:0053880"}


id: PBO:0016995
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae PMP3","termid":"PBO:0016995"}


id: PBO:0089119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external mitochondrial NADH dehydrogenase (ubiquinone) Nde1/Nde2","termid":"PBO:0089119"}


id: GO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that interacts with pituitary adenylate cyclase-activating polypeptide.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"pituitary adenylate cyclase-activating polypeptide receptor activity","secondary_identifiers":["GO:0016522"],"synonyms":[{"name":"PACAP receptor","type":"exact"},{"name":"pituitary adenylate cyclase activating polypeptide receptor","type":"exact"},{"name":"pituitary adenylate cyclase activating protein receptor activity","type":"exact"},{"name":"pituitary adenylate cyclase-activating peptide receptor activity","type":"related"},{"name":"pituitary adenylyl cyclase activating protein receptor activity","type":"exact"}],"termid":"GO:0001634"}


id: SO:0001425
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by ligation based sequencing technologies.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligation_based_read","synonyms":[{"name":"ligation based read","type":"related"}],"termid":"SO:0001425"}


id: PBO:0017764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type zinc finger protein (predicted)","termid":"PBO:0017764"}


id: PBO:0005687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral inner nuclear membrane protein Ima1","termid":"PBO:0005687"}


id: SO:0001795
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regional centromere is a large modular centromere found in fission yeast and higher eukaryotes. It consist of a central core region flanked by inverted inner and outer repeat regions.","definition_xrefs":["PMID:7502067","SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromere","termid":"SO:0000577"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere","synonyms":[{"name":"regional centromere","type":"exact"}],"termid":"SO:0001795"}


id: PBO:0039040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 2","termid":"PBO:0039040"}


id: GO:0061332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which a bud forms from the embryonic hindgut tube to form the Malpighian tubule. A bud is a protrusion that forms from the tube by localized changes in cell shape and position.","definition_xrefs":["GOC:dph","PMID:19783135","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial bud","termid":"GO:0060572"},{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule bud morphogenesis","synonyms":[{"name":"Malpighian tubule formation","type":"exact"}],"termid":"GO:0061332"}


id: PBO:0002273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Dlc2 (predicted)","termid":"PBO:0002273"}


id: FYPO:0006093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other property of a microfilament motor activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal microfilament motor activity","synonyms":[{"name":"abnormal actin filament motor activity","type":"exact"},{"name":"abnormal microfilament motor (ATPase) activity","type":"exact"},{"name":"abnormal myosin ATPase activity","type":"related"}],"termid":"FYPO:0006093"}


id: PBO:0049448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 2","termid":"PBO:0049448"}


id: PBO:0058062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4282","termid":"PBO:0058062"}


id: PBO:0069838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1124, pseudogene","termid":"PBO:0069838"}


id: PBO:0053089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 2A","termid":"PBO:0053089"}


id: PBO:0017052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific phosphoprotein","termid":"PBO:0017052"}


id: PBO:0071456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 62","termid":"PBO:0071456"}


id: PBO:0085720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in telomeric and mating-type locus silencing; interacts with Sir2p and also interacts with Gal11p, which is a component of the RNA pol II mediator complex; ESC8 has a paralog, IOC3, that arose from the whole genome duplication","termid":"PBO:0085720"}


id: PBO:0038750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR1A pseudogene 1","termid":"PBO:0038750"}


id: PBO:0039021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartylglucosaminidase","termid":"PBO:0039021"}


id: MOD:01255
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to S-(2-sulfanylethyl)cysteine.","definition_xrefs":["PubMed:11507762","Unimod:200#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,2-ethanedithiol modified residue","termid":"MOD:00553"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-sulfanylethyl)cysteine (Ser)","synonyms":[{"name":"EDT","type":"related"},{"name":"Ethanedithiol","type":"related"},{"name":"S-(2-mercaptoethyl)cysteine","type":"exact"}],"termid":"MOD:01255"}


id: PR:B8Y7Y5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iec5 gene.","definition_xrefs":["UniProtKB:B8Y7Y5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.14","synonyms":[{"name":"Spom972h-iec5","type":"exact"}],"termid":"PR:B8Y7Y5"}


id: PBO:0027029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_telomere","termid":"PBO:0027029"}


id: PBO:0089188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein, nucleoside-triphosphate diphosphatase, human ASMTL ortholog","termid":"PBO:0089188"}


id: GO:0004825
data:
  {"annotated_genes":["SJAG_01159","SJAG_16456"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91297,101329],"is_not":false,"summary":null,"term":"GO:0004825"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-methionyl-tRNA(Met).","definition_xrefs":["EC:6.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01159":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"methionine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:13481","Reactome:R-HSA-380157","MetaCyc:METHIONINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379994"],"synonyms":[{"name":"L-methionine:tRNAMet ligase (AMP-forming)","type":"related"},{"name":"MetRS activity","type":"related"},{"name":"methionine translase activity","type":"related"},{"name":"methionyl-tRNA synthetase activity","type":"exact"},{"name":"methionyl-transfer RNA synthetase activity","type":"related"},{"name":"methionyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"methionyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004825","terms_by_termid":{"GO:0004825":null}}


id: PBO:0078436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-6","termid":"PBO:0078436"}


id: PBO:0074532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA F","termid":"PBO:0074532"}


id: PBO:0090823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf13","termid":"PBO:0090823"}


id: PBO:0061909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily AA member 1 pseudogene","termid":"PBO:0061909"}


id: PBO:0031847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_Golgi_morphology","termid":"PBO:0031847"}


id: SO:0000638
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Part of an rRNA transcription unit that is transcribed but discarded during maturation, not giving rise to any part of rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA_primary_transcript_region","termid":"SO:0000838"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_spacer_region","synonyms":[{"name":"transcribed spacer region","type":"exact"}],"termid":"SO:0000638"}


id: PBO:0072739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A4","termid":"PBO:0072739"}


id: SO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number as extra chromosomes are present.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid","termid":"SO:0000054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Hyperploid"],"termid":"SO:0000055"}


id: SO:0001185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing the sequence of a transcript that has catalytic activity with or without an associated ribonucleoprotein.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enzymatic","termid":"SO:0001185"}


id: GO:0006216
data:
  {"annotated_genes":["SJAG_03771","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85227,104515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cytidine, cytosine riboside, a widely distributed nucleoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidine metabolic process","termid":"GO:0046087"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside catabolic process","termid":"GO:0046133"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01673":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"cytidine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytidine breakdown","type":"exact"},{"name":"cytidine catabolism","type":"exact"},{"name":"cytidine degradation","type":"exact"}],"termid":"GO:0006216","terms_by_termid":{"GO:0009972":null}}


id: PBO:0065547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 1","termid":"PBO:0065547"}


id: PBO:0089569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ctf18 RFC-like complex subunit Ctf8","termid":"PBO:0089569"}


id: _global:during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during","secondary_identifiers":["GOREL:0000002"],"termid":"_global:during"}


id: PBO:0066459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 12, pseudogene","termid":"PBO:0066459"}


id: PR:O94545
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An importin-11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10997:SF7","OMA:SCHPO04626","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin beta-like protein kap113 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.06","secondary_identifiers":["UniProtKB:O94545"],"synonyms":[{"name":"Spom972h-IPO11","type":"exact"},{"name":"karyopherin-113 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94545"}


id: GO:0052516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the jasmonic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont jasmonic acid-mediated defense response (obsolete GO:0052516)","synonyms":[{"name":"induction by organism of symbiont JA-mediated defense response","type":"narrow"},{"name":"induction by organism of symbiont jasmonic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of symbiont JA-mediated defense response","type":"exact"},{"name":"positive regulation by organism of symbiont jasmonic acid-mediated defense response","type":"exact"}],"termid":"GO:0052516"}


id: PBO:0047517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculation and elongation protein zeta 2","termid":"PBO:0047517"}


id: PATO:0002422
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pertaining to the individual parts making up an aggregate fruit like a many-lobed \\\"berry,\\\" such as a raspberry.","definition_xrefs":["wikipedia:https://en.wikipedia.org/wiki/Acinus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acinar","termid":"PATO:0002422"}


id: GO:0070817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the P-TEFb-cap methyltransferase complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"P-TEFb-cap methyltransferase complex localization","synonyms":[{"name":"P-TEFb-cap methyltransferase complex localisation","type":"exact"},{"name":"establishment and maintenance of P-TEFb-cap methyltransferase complex localization","type":"exact"}],"termid":"GO:0070817"}


id: PBO:0049687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepcidin antimicrobial peptide","termid":"PBO:0049687"}


id: GO:0052667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-methylethanolamine phosphate + S-adenosyl-L-methionine = N,N-dimethylethanolamine phosphate + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphomethylethanolamine N-methyltransferase activity (obsolete GO:0052667)","synonyms":[{"name":"N-methylethanolamine phosphate N-methyltransferase activity","type":"exact"}],"termid":"GO:0052667"}


id: GO:0035914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle cell, a somatic cell located in skeletal muscle.","definition_xrefs":["GOC:BHF","CL:0000188","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle cell differentiation","termid":"GO:0035914"}


id: PBO:0040492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATXN8 opposite strand lncRNA","termid":"PBO:0040492"}


id: PBO:0056925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol oxygenase","termid":"PBO:0056925"}


id: PR:O74922
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.12","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC757.12","type":"exact"}],"termid":"PR:O74922"}


id: PBO:0052554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor F1","termid":"PBO:0052554"}


id: GO:0071122
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to vascular endothelial growth factor A.","definition_xrefs":["PMID:17363377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha9-beta1 integrin-VEGF-A complex","synonyms":[{"name":"ITGA9-ITGB1-VEGFA complex","type":"narrow"}],"termid":"GO:0071122"}


id: PBO:0073733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC1A2 antisense RNA 1","termid":"PBO:0073733"}


id: PBO:0071195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 36","termid":"PBO:0071195"}


id: PR:000027595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3 that is a translation product of the Schizosaccharomyces pombe 972h- hht3 gene or a 1:1 ortholog thereof in fungi.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.3","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"hht3","type":"exact"}],"termid":"PR:000027595"}


id: PBO:0070853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 6","termid":"PBO:0070853"}


id: PBO:0079657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 5","termid":"PBO:0079657"}


id: PBO:0042106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 179","termid":"PBO:0042106"}


id: FYPO:0007399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during vegetative growth","termid":"FYPO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitotic interphase","synonyms":[{"name":"normal protein localisation to kinetochore during interphase during vegetative growth","type":"exact"},{"name":"normal protein localization to kinetochore during interphase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0007399"}


id: GO:0070003
data:
  {"annotated_genes":["SJAG_04969","SJAG_03316","SJAG_01014","SJAG_01612","SJAG_05351","SJAG_03151"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94455,95289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036374"},{"annotations":[106868,96326,93780,90044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004298"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01014":null,"SJAG_01612":null,"SJAG_03151":null,"SJAG_03316":null,"SJAG_04969":null,"SJAG_05351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0003674","GO:0008233","GO:0003824"],"is_obsolete":false,"name":"threonine-type peptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070003","terms_by_termid":{"GO:0004298":null,"GO:0036374":null}}


id: GO:0060159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a dopamine receptor signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of dopamine receptor signaling pathway","synonyms":[{"name":"regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060159"}


id: FYPO:0001761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1/S transition of the mitotic cell cycle is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cell cycle phase transition","termid":"FYPO:0006916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic G1/S phase transition","synonyms":[{"name":"normal G1/S phase transition during mitotic cell cycle","type":"exact"},{"name":"normal cell cycle progression through mitotic G1/S phase transition","type":"exact"},{"name":"normal mitotic G1/S phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0001761"}


id: PBO:0114496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs; receives sulfur from the E1-like enzyme Uba4p and transfers it to tRNA; functions as a protein tag involved in the urmylation of proteins involved in nutrient sensing and the oxidative stress response; regulates stress-dependent condensate formation, promoting phase separation of numerous proteins to promote stress resilience and survival; forms co-condensates with Uba4p resulting in increased target urmylation","termid":"PBO:0114496"}


id: MOD:01839
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links either two L-cysteine residues, or an L-cysteine residue and an L-serine residue by a thioether bond to form L-lanthionine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"lanthionine","termid":"MOD:01841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lanthionine","termid":"MOD:01839"}


id: GO:0160162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the cell surface receptor CD27 to its physiological ligand CD70, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:8387892","PMID:26359318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CD27 signaling pathway","termid":"GO:0160162"}


id: GO:0004090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a secondary alcohol + NADP+ = a ketone + H+ + NADPH.","definition_xrefs":["RHEA:19257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbonyl reductase (NADPH) activity","secondary_identifiers":["EC:1.1.1.184","MetaCyc:CARBONYL-REDUCTASE-NADPH-RXN","Reactome:R-HSA-8937419"],"synonyms":[{"name":"ALR3","type":"related"},{"name":"NADPH-dependent carbonyl reductase activity","type":"related"},{"name":"NADPH2-dependent carbonyl reductase activity","type":"related"},{"name":"aldehyde reductase 1","type":"related"},{"name":"aldehyde reductase I activity","type":"related"},{"name":"carbonyl reductase activity","type":"related"},{"name":"nonspecific NADPH-dependent carbonyl reductase activity","type":"related"},{"name":"prostaglandin 9-ketoreductase activity","type":"narrow"},{"name":"secondary-alcohol:NADP+ oxidoreductase activity","type":"related"},{"name":"xenobiotic ketone reductase activity","type":"narrow"}],"termid":"GO:0004090"}


id: SO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the H4 histone whereby multiple lysines are acylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acylation_region","termid":"SO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K_acylation_region","synonyms":[{"name":"H4K acylation region","type":"exact"},{"name":"H4KAc","type":"related"}],"termid":"SO:0001738"}


id: PBO:0018176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin family histone deacetylase Hst2","termid":"PBO:0018176"}


id: PBO:0064358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-melanin concentrating hormone like 1 (pseudogene)","termid":"PBO:0064358"}


id: PBO:0077534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 247","termid":"PBO:0077534"}


id: GO:1905150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of voltage-gated sodium channel activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:24198377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of voltage-gated sodium channel activity","synonyms":[{"name":"regulation of voltage gated sodium channel activity","type":"exact"},{"name":"regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"regulation of voltage-sensitive sodium channel","type":"exact"}],"termid":"GO:1905150"}


id: PBO:0086031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, abundance changes with carbon source","termid":"PBO:0086031"}


id: SO:0000264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a leucine anticodon, and a 3' leucine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"leucine_tRNA_primary_transcript","termid":"SO:0000221"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucyl_tRNA","synonyms":[{"name":"leucyl tRNA","type":"exact"},{"name":"leucyl-transfer RNA","type":"exact"},{"name":"leucyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000264"}


id: GO:0032847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a process that reduces the internal pH of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"is_a","term_name":"regulation of intracellular pH","termid":"GO:0051453"},{"relation_name":"regulates","term_name":"intracellular pH reduction","termid":"GO:0051452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular pH reduction","synonyms":[{"name":"regulation of cell pH reduction","type":"exact"},{"name":"regulation of cellular acidification","type":"exact"},{"name":"regulation of intracellular acidification","type":"related"},{"name":"regulation of intracellular pH reduction","type":"exact"},{"name":"regulation of reduction of cellular pH","type":"exact"},{"name":"regulation of reduction of pH in cell","type":"exact"}],"termid":"GO:0032847"}


id: PBO:0067494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 629, pseudogene","termid":"PBO:0067494"}


id: GO:0032578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an aleurone grain.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"aleurone grain","termid":"GO:0033095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"aleurone grain membrane","termid":"GO:0032578"}


id: GO:0141049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathionylated protein (PSSG) + glutathione (GSH) = protein-thiol (PSH) + glutathione disulfide (GSSG). The reaction may proceed via a 'monothiol' or 'dithiol' mechanism.","definition_xrefs":["PMID:36771108","PMID:23397885","PMID:33932870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824","GO:0015036","GO:0140096"],"is_obsolete":false,"name":"protein-glutathione oxidoreductase (glutathione) activity","synonyms":[{"name":"glutaredoxin activity","type":"broad"},{"name":"glutathione oxidoreductase activity","type":"broad"}],"termid":"GO:0141049"}


id: PBO:0060563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBL1, DAN family BMP antagonist","termid":"PBO:0060563"}


id: SO:0001666
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sub element of the DCE core promoter element with consensus sequence CTGT.","definition_xrefs":["SO:ke","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"DCE","termid":"SO:0001664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCE_SII","synonyms":[{"name":"DCE SII","type":"exact"}],"termid":"SO:0001666"}


id: GO:0009078
data:
  {"annotated_genes":["SJAG_03985","SJAG_04149","SJAG_04145","SJAG_04098","SJAG_03562","SJAG_03243","SJAG_06635","SJAG_02841","SJAG_00396"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[99407,106222,96916,106582,109420,86717,102305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"},{"annotations":[107246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006551"},{"annotations":[99408,106583,109421,86718,107247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any amino acid that requires pyruvate for its synthesis, e.g. alanine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"pyruvate family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyruvate family amino acid metabolism","type":"exact"}],"termid":"GO:0009078","terms_by_termid":{"GO:0006551":null,"GO:0009098":null,"GO:0009099":null,"GO:0042853":null}}


id: GO:0090241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of histone H4 acetylation, the modification of histone H4 by the addition of an acetyl group.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H4 acetylation (obsolete GO:0090241)","termid":"GO:0090241"}


id: PR:A9ZLL8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsd90 gene.","definition_xrefs":["UniProtKB:A9ZLL8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein lsd90 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.16c","synonyms":[{"name":"90kDa large and small daughter protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsd90","type":"exact"}],"termid":"PR:A9ZLL8"}


id: PATO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001116 relative impulse value (obsolete PATO:0001116)","termid":"PATO:0001116"}


id: PBO:0079297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"titin","termid":"PBO:0079297"}


id: GO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vinculin-containing myofibril attachment structure of striated muscle that connects sarcomeres to the extracellular matrix. In nematode body wall muscle, the dense body performs the dual role of Z-disk and costamere.","definition_xrefs":["GOC:kmv","PMID:17492481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"striated muscle dense body","termid":"GO:0055120"}


id: PBO:0062890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovo like zinc finger 2","termid":"PBO:0062890"}


id: PBO:0003041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine/adenosine deaminase family (predicted)","termid":"PBO:0003041"}


id: GO:0031400
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein modification process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"down regulation of protein modification","type":"exact"},{"name":"down-regulation of protein modification","type":"exact"},{"name":"downregulation of protein modification","type":"exact"},{"name":"inhibition of protein modification","type":"narrow"}],"termid":"GO:0031400","terms_by_termid":{"GO:0033234":null}}


id: GO:0008751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)H dehydrogenase (obsolete GO:0008751)","synonyms":[{"name":"NAD(P)H dehydrogenase","type":"exact"}],"termid":"GO:0008751"}


id: PBO:0069831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1117, pseudogene","termid":"PBO:0069831"}


id: PR:O94377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit f, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.11","synonyms":[{"name":"Spom972h-atp17","type":"exact"}],"termid":"PR:O94377"}


id: GO:0060178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the localization of exocysts. An exocyst is a protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"exocyst localization","termid":"GO:0051601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of exocyst localization","synonyms":[{"name":"regulation of exocyst localisation","type":"exact"}],"termid":"GO:0060178"}


id: PR:O94530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sua5 gene.","definition_xrefs":["UniProtKB:O94530","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonylcarbamoyl-AMP synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.03c","synonyms":[{"name":"L-threonylcarbamoyladenylate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sua5","type":"exact"},{"name":"TC-AMP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A37 threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94530"}


id: GO:1904540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycolytic process through fructose-6-phosphate.","definition_xrefs":["ISBN:0879010479","ISBN:0201090910","GOC:TermGenie","GO_REF:0000058","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycolytic process","termid":"GO:0045821"},{"relation_name":"is_a","term_name":"regulation of glycolytic process through fructose-6-phosphate","termid":"GO:1904538"},{"relation_name":"positively_regulates","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0005975","GO:0006091","GO:0044281","GO:0008150","GO:0044248","GO:0055086"],"is_obsolete":false,"name":"positive regulation of glycolytic process through fructose-6-phosphate","synonyms":[{"name":"activation of glycolysis through fructose-6-phosphate","type":"narrow"},{"name":"activation of glycolytic process through fructose-6-phosphate","type":"narrow"},{"name":"positive regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"up regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"up regulation of glycolytic process through fructose-6-phosphate","type":"exact"},{"name":"up-regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"up-regulation of glycolytic process through fructose-6-phosphate","type":"exact"},{"name":"upregulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"upregulation of glycolytic process through fructose-6-phosphate","type":"exact"}],"termid":"GO:1904540"}


id: PR:O42859
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 28S ribosomal protein S14, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.07c","secondary_identifiers":["UniProtKB:O42859"],"synonyms":[{"name":"Spom972h-MRPS14","type":"exact"}],"termid":"PR:O42859"}


id: PBO:0089411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, human DHX29 ortholog","termid":"PBO:0089411"}


id: GO:0009335
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the formation of holo-[acyl-carrier protein] from CoA and apo-[acyl-carrier protein].","definition_xrefs":["EC:2.7.8.7"],"gene_count":0,"genotype_count":0,"name":"obsolete holo-[acyl-carrier protein] synthase complex (obsolete GO:0009335)","synonyms":[{"name":"holo-ACP synthase complex","type":"exact"},{"name":"holo-[acyl-carrier protein] synthase complex","type":"exact"}],"termid":"GO:0009335"}


id: GO:0008616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of queuosines, a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside biosynthetic process","termid":"GO:0042455"},{"relation_name":"is_a","term_name":"queuosine metabolic process","termid":"GO:0046116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"queuosine biosynthetic process","synonyms":[{"name":"queuosine anabolism","type":"exact"},{"name":"queuosine biosynthesis","type":"exact"},{"name":"queuosine formation","type":"exact"},{"name":"queuosine synthesis","type":"exact"}],"termid":"GO:0008616"}


id: PR:Q9UR05
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dlc2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR05"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain 1, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.07c","synonyms":[{"name":"Spom972h-dlc2","type":"exact"}],"termid":"PR:Q9UR05"}


id: GO:0019089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of virions in order to create new infection.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete transmission of virus (obsolete GO:0019089)","synonyms":[{"name":"viral transmission","type":"exact"}],"termid":"GO:0019089"}


id: PBO:0058923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIRLET7B host gene","termid":"PBO:0058923"}


id: GO:0061331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population and contributing to the shaping of a Malpighian tubule.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10","PMID:19783135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation involved in renal tubule morphogenesis","termid":"GO:2001013"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in Malpighian tubule morphogenesis","termid":"GO:0061331"}


id: PR:Q9USR6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetyltransferase 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02576","PANTHER:PTHR13256:SF10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 9-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.03c","secondary_identifiers":["UniProtKB:Q9USR6"],"synonyms":[{"name":"Spom972h-NAT9","type":"exact"}],"termid":"PR:Q9USR6"}


id: PBO:0111338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATP-dependent RNA helicase Has1","termid":"PBO:0111338"}


id: PR:000085728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 and phosphorylated on Ser-10. UniProtKB:P10651, 2-136, Lys-10, MOD:00663|Ser-11, MOD:00046.","definition_xrefs":["PMID:19362535","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me(K9),Phos(S10)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-10, MOD:00663|Ser-11, MOD:00046","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K9-methylated and phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K9MePhos:1","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-10, MOD:00663|Ser-11, MOD:00046","type":"exact"},{"name":"hht3/Me(K9),Phos(S10)","type":"exact"}],"termid":"PR:000085728"}


id: GO:0070152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling isoleucine to isoleucyl-tRNA in a mitochondrion, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoleucyl-tRNA aminoacylation","termid":"GO:0006428"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0006520","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"mitochondrial isoleucyl-tRNA aminoacylation","termid":"GO:0070152"}


id: PBO:0070892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL17-C18orf32 readthrough","termid":"PBO:0070892"}


id: PR:O14174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt20 gene.","definition_xrefs":["UniProtKB:O14174","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit spt20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.10c","synonyms":[{"name":"Spom972h-spt20","type":"exact"}],"termid":"PR:O14174"}


id: PBO:0049056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 61","termid":"PBO:0049056"}


id: GO:0015545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bicyclomycin from one side of a membrane to the other. Bicyclomycin (or bicozamycin) is an antibacterial drug often used as a livestock feed additive.","definition_xrefs":["ISBN:091191028X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"bicyclomycin transmembrane transporter activity","synonyms":[{"name":"bicyclomycin transporter activity","type":"related"},{"name":"bicyclomycin/sulfathiazole:hydrogen antiporter activity","type":"related"}],"termid":"GO:0015545"}


id: GO:0000017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of alpha-glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Alpha-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in an alpha configuration.","definition_xrefs":["PMID:9919658","GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transport","termid":"GO:0042946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"alpha-glucoside transport","termid":"GO:0000017"}


id: GO:2000010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to the cell surface.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell surface","termid":"GO:2000008"},{"relation_name":"positively_regulates","term_name":"protein localization to cell surface","termid":"GO:0034394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell surface","synonyms":[{"name":"positive regulation of protein localisation at cell surface","type":"exact"},{"name":"positive regulation of protein localization at cell surface","type":"exact"}],"termid":"GO:2000010"}


id: PBO:0058064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4283-2","termid":"PBO:0058064"}


id: GO:0170012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[histone H3 position 18] + NAD+ = 2''-O-(2E)-but-2-enoyl-ADP-D-ribose + L-lysyl-[histone H3] + nicotinamide.","definition_xrefs":["PMID:34927582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone decrotonylase activity","termid":"GO:0160012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0140096","GO:0016787","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histone H3K18 decrotonylase activity","secondary_identifiers":["RHEA:69332"],"termid":"GO:0170012"}


id: PBO:0030426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_centromere_clustering_at_nuclear_periphery","termid":"PBO:0030426"}


id: PBO:0056429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 2","termid":"PBO:0056429"}


id: PBO:0086691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by treatment with 8-methoxypsoralen and UVA irradiation","termid":"PBO:0086691"}


id: SO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence that can autonomously replicate, as a plasmid, when transformed into a bacterial host.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS","synonyms":[{"name":"autonomously replicating sequence","type":"exact"}],"termid":"SO:0000436"}


id: GO:0000993
data:
  {"annotated_genes":["SJAG_02691","SJAG_00448","SJAG_01151","SJAG_04933","SJAG_03118","SJAG_01610","SJAG_00139","SJAG_00483","SJAG_04353","SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70100,71359,75044,77435,77450],"is_not":false,"summary":null,"term":"GO:0000993"},{"annotations":[64403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[76870,71415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[75321,77119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001139"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal RNA polymerase II transcription machinery binding","termid":"GO:0001099"},{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_02691":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"RNA polymerase II complex binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase II core binding","type":"exact"},{"name":"RNAP II core binding","type":"exact"}],"termid":"GO:0000993","terms_by_termid":{"GO:0000993":null,"GO:0001139":null,"GO:0099122":null,"GO:1990269":null}}


id: PBO:0089320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3, implicated in negative regulation of ubiquitinated chromatin formation","termid":"PBO:0089320"}


id: GO:0007063
data:
  {"annotated_genes":["SJAG_05978","SJAG_03591","SJAG_00823","SJAG_01716","SJAG_01825","SJAG_00369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87763,102381,102478,111510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"},{"annotations":[102699,103541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045875"},{"annotations":[103543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905406"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sister chromatid cohesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"regulates","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007063","terms_by_termid":{"GO:0045875":null,"GO:1905406":null,"GO:1905412":null}}


id: PBO:0061307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide FF receptor 1","termid":"PBO:0061307"}


id: SO:0001595
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, by shifting two bases backward.","direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_2_frameshift_variant","synonyms":[{"name":"+2 frameshift variant","type":"exact"},{"name":"plus 2 frameshift variant","type":"exact"}],"termid":"SO:0001595"}


id: GO:0042562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an hormone, a naturally occurring substance secreted by specialized cells that affect the metabolism or behavior of cells possessing functional receptors for the hormone. Hormones may be produced by the same, or different, cell as express the receptor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hormone binding","termid":"GO:0042562"}


id: PR:Q10224
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trm9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (carboxymethyluridine(34)-5-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.03c","synonyms":[{"name":"Spom972h-trm9","type":"exact"},{"name":"tRNA (uracil-5-)-methyltransferase trm9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA [Um34] methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA methylase 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10224"}


id: PBO:0018085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug147","termid":"PBO:0018085"}


id: PBO:0065360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1 pseudogene 1","termid":"PBO:0065360"}


id: PBO:0003044
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae thi7","termid":"PBO:0003044"}


id: PBO:0064501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit D","termid":"PBO:0064501"}


id: GO:0070950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a bacterium, the directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"}


id: PBO:0088231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase","termid":"PBO:0088231"}


id: PBO:0034787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex beta subunit Apl1 (predicted)","termid":"PBO:0034787"}


id: GO:0040027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:kmv","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vulval development","termid":"GO:0040028"},{"relation_name":"is_a","term_name":"negative regulation of nematode larval development","termid":"GO:0061064"},{"relation_name":"negatively_regulates","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vulval development","synonyms":[{"name":"down regulation of vulval development","type":"exact"},{"name":"down-regulation of vulval development","type":"exact"},{"name":"downregulation of vulval development","type":"exact"},{"name":"inhibition of vulval development","type":"narrow"}],"termid":"GO:0040027"}


id: PBO:0004064
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.4.1.5","termid":"PBO:0004064"}


id: FYPO:0003437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein kinase activity is absent during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished protein kinase activity during mitotic G1 phase","synonyms":[{"name":"protein kinase activity abolished during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0003437"}


id: PR:Q9C107
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat and HMG-box DNA-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01372","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome loss protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.02c","secondary_identifiers":["UniProtKB:Q9C107"],"synonyms":[{"name":"DNA polymerase alpha accessory factor Mcl1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-WDHD1","type":"exact"}],"termid":"PR:Q9C107"}


id: GO:1990632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the submandibular gland is generated and organized.","definition_xrefs":["PMID:20890964","PMID:15063181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in salivary gland morphogenesis","termid":"GO:0060445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in submandibular gland morphogenesis","synonyms":[{"name":"submandibular gland branching morphogenesis","type":"exact"},{"name":"submandibular gland ductal branching","type":"exact"}],"termid":"GO:1990632"}


id: GO:1903048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acetylcholine-gated cation channel activity.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","PMID:21718690","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"is_a","term_name":"regulation of postsynaptic neurotransmitter receptor activity","termid":"GO:0098962"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0055085"],"is_obsolete":false,"name":"regulation of acetylcholine-gated cation channel activity","termid":"GO:1903048"}


id: PATO:0000354
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000354 protein composition value (obsolete PATO:0000354)","termid":"PATO:0000354"}


id: GO:0046174
data:
  {"annotated_genes":["SJAG_04320","SJAG_04192","SJAG_04870","SJAG_00237","SJAG_04048","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[89091,112534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[84642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[84748,111214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[101168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"polyol catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyhydric alcohol catabolic process","type":"exact"},{"name":"polyol breakdown","type":"exact"},{"name":"polyol catabolism","type":"exact"},{"name":"polyol degradation","type":"exact"}],"termid":"GO:0046174","terms_by_termid":{"GO:0006062":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null,"GO:0071545":null}}


id: GO:0035061
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A class of nuclear body measuring 20-25 nm in diameter and distributed throughout the interchromatin space, linked together by thin fibrils. They are believed to be storage centers for various snRNAs, snRNPs, serine/arginine-rich proteins and RNA polymerase II. A typical mammalian cell contains 25-50 clusters of interchromatin granules. Interchromatin granule clusters do not contain the heterogeneous nuclear RNA-binding proteins (hnRNPs).","definition_xrefs":["PMID:10984439","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"interchromatin granule","secondary_identifiers":["NIF_Subcellular:sao1049471211"],"synonyms":[{"name":"ICG","type":"exact"}],"termid":"GO:0035061"}


id: PBO:0040139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 2","termid":"PBO:0040139"}


id: PBO:0076617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor A pseudogene 2","termid":"PBO:0076617"}


id: FYPO:0006175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is abnormal during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to centromere during mitotic metaphase","synonyms":[{"name":"abnormal protein localisation to centromere during mitotic metaphase","type":"exact"},{"name":"abnormal protein localisation to chromosome, centromeric region during mitotic metaphase","type":"exact"},{"name":"abnormal protein localization to centromere during metaphase during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromosome, centric region during mitotic metaphase","type":"exact"},{"name":"abnormal protein localization to chromosome, centromeric region during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006175"}


id: PBO:0075986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAU2 antisense RNA 1","termid":"PBO:0075986"}


id: PBO:0011430
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in vertebrate","termid":"PBO:0011430"}


id: GO:1902737
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, membranous protrusion found primarily on dendritic stretches of developing neurons. May receive synaptic input, and can develop into dendritic spines.","definition_xrefs":["Wikipedia:Dendritic_filopodia","PMID:24464040","GOC:pad","GO_REF:0000064","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filopodium","termid":"GO:0030175"},{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic filopodium","synonyms":[{"name":"dendrite filopodium","type":"exact"}],"termid":"GO:1902737"}


id: PBO:0056828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltase-glucoamylase 2 (putative)","termid":"PBO:0056828"}


id: PR:Q9Y7K7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Golgi apparatus membrane protein TVP23 homolog C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apparatus membrane protein tvp23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.05c","secondary_identifiers":["UniProtKB:Q9Y7K7"],"synonyms":[{"name":"Spom972h-TVP23C","type":"exact"}],"termid":"PR:Q9Y7K7"}


id: GO:0150024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an oxidised low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:aruk","PMID:27607416","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidised low-density lipoprotein particle clearance","synonyms":[{"name":"ox-LDL particle clearance","type":"exact"},{"name":"oxLDL particle clearance","type":"exact"},{"name":"oxidised LDL particle clearance","type":"exact"},{"name":"oxidized LDL particle clearance","type":"exact"},{"name":"oxidized low-density lipoprotein particle clearance","type":"exact"}],"termid":"GO:0150024"}


id: PBO:0089820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation and termination factor eIF5A (predicted)tt","termid":"PBO:0089820"}


id: PBO:0046839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 12","termid":"PBO:0046839"}


id: MOD:01860
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine bacillithiol disulfide.","definition_xrefs":["RESID:AA0563","ChEBI:61338","PubMed:19578333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine bacillithiol disulfide","synonyms":[{"name":"(2S)-(2-[S-(L-cystein-S-yl)-L-cysteinyl]amino-2-deoxy-alpha-D-glucopyranosyloxy)-butanedioic acid","type":"exact"},{"name":"BSH","type":"exact"},{"name":"L-cysteine bacillithiol disulfide","type":"exact"},{"name":"MOD_RES S-bacillithiol cysteine disulfide","type":"exact"}],"termid":"MOD:01860"}


id: GO:0140516
data:
  {"annotated_genes":["SJAG_00840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99784],"is_not":false,"summary":null,"term":"GO:0140516"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle process in which the controlled breakdown of the nuclear pores occurs during open or closed mitosis.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear pore organization","termid":"GO:0006999"},{"relation_name":"is_a","term_name":"mitotic nuclear membrane disassembly","termid":"GO:0007077"},{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic nuclear pore complex disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear pore complex disassembly during mitosis","type":"exact"}],"termid":"GO:0140516","terms_by_termid":{"GO:0140516":null}}


id: PBO:0061791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 2 pseudogene 1","termid":"PBO:0061791"}


id: PBO:0051630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 1","termid":"PBO:0051630"}


id: PBO:0066014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor activity modifying protein 1","termid":"PBO:0066014"}


id: GO:0102275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA(5-) + an L-cysteine-S-conjugate = coenzyme A + H+ + an N-malonyl-L-cysteine-S-conjugate.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cysteine-S-conjugate N-malonyl transferase activity","secondary_identifiers":["MetaCyc:RXN-12534"],"termid":"GO:0102275"}


id: GO:0047204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate + chlorogenate = (-)-quinate + 2-O-caffeoylglucarate.","definition_xrefs":["RHEA:23204","EC:2.3.1.98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"chlorogenate-glucarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.98-RXN","KEGG_REACTION:R02998"],"synonyms":[{"name":"chlorogenate:glucarate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"chlorogenate:glucarate caffeoyltransferase activity","type":"related"},{"name":"chlorogenic acid:glucaric acid O-caffeoyltransferase activity","type":"related"}],"termid":"GO:0047204"}


id: GO:0046265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiocyanate, any anion of thiocyanic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiocyanate metabolic process","termid":"GO:0018969"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"thiocyanate catabolic process","synonyms":[{"name":"thiocyanate breakdown","type":"exact"},{"name":"thiocyanate catabolism","type":"exact"},{"name":"thiocyanate degradation","type":"exact"}],"termid":"GO:0046265"}


id: GO:0000938
data:
  {"annotated_genes":["SJAG_03963","SJAG_02811","SJAG_01645","SJAG_04902"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91840,92947,93217,105314],"is_not":false,"summary":null,"term":"GO:0000938"}]},"cv_name":"cellular_component","definition":"A quatrefoil tethering complex required for retrograde traffic from the early endosome back to the late Golgi and biogenesis of cytoplasmic vesicles.","definition_xrefs":["PMID:10637310","GOC:clt","PMID:12446664","GOC:rn","PMID:12077354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"},{"relation_name":"part_of","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01645":null,"SJAG_02811":null,"SJAG_03963":null,"SJAG_04902":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0031410","GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"GARP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi associated retrograde protein complex","type":"exact"},{"name":"VFT tethering complex","type":"exact"},{"name":"Vps fifty three tethering complex","type":"exact"}],"termid":"GO:0000938","terms_by_termid":{"GO:0000938":null}}


id: GO:0020030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protrusion that develops in the plasma membrane of a parasitized erythrocyte. An example of this component is found in Plasmodium species.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"infected host cell surface knob","termid":"GO:0020030"}


id: RO:0002625
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"},{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_eggs_laid_in_by","termid":"RO:0002625"}


id: GO:0102055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3'-phosphonato-5'-adenylyl sulfate + a 12-hydroxyjasmonate = adenosine 3',5'-bismonophosphate + a 12-hydroxyjasmonate sulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 12-hydroxyjasmonate sulfotransferase activity (obsolete GO:0102055)","termid":"GO:0102055"}


id: PATO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000222 muscle elevation (obsolete PATO:0000222)","termid":"PATO:0000222"}


id: GO:0046722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of lactic acid, 2-hydroxypropanoic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane lactate transport","termid":"GO:0035879"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"lactic acid secretion","synonyms":[{"name":"lactate secretion","type":"exact"}],"termid":"GO:0046722"}


id: PBO:0055743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox transcription factor 1 beta","termid":"PBO:0055743"}


id: GO:0103088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-8-methylthiooctanoate + acetyl-CoA + H2O = H+ + 2-(6'-methylthio)hexylmalate + coenzyme A.","definition_xrefs":["EC:2.3.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-(6'-methylthio)hexylmalate synthase activity","secondary_identifiers":["MetaCyc:RXNQT-4172"],"termid":"GO:0103088"}


id: PBO:0042573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein N-terminal like pseudogene 2","termid":"PBO:0042573"}


id: PBO:0063274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma cluster","termid":"PBO:0063274"}


id: GO:0009710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tropane alkaloids, compounds containing the 8-methyl-8-azabicyclo(3.2.1)octane ring system.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"tropane alkaloid metabolic process","termid":"GO:0046448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"tropane alkaloid biosynthetic process","synonyms":[{"name":"tropane alkaloid anabolism","type":"exact"},{"name":"tropane alkaloid biosynthesis","type":"exact"},{"name":"tropane alkaloid formation","type":"exact"},{"name":"tropane alkaloid synthesis","type":"exact"}],"termid":"GO:0009710"}


id: PR:O14267
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC7D4.12c gene.","definition_xrefs":["UniProtKB:O14267","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized UPF0442 protein C7D4.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.12c","synonyms":[{"name":"Spom972h-SPAC7D4.12c","type":"exact"}],"termid":"PR:O14267"}


id: PBO:0026644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G2_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0026644"}


id: GO:0044431
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the Golgi apparatus, a compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi apparatus part (obsolete GO:0044431)","synonyms":[{"name":"Golgi component","type":"exact"},{"name":"Golgi subcomponent","type":"exact"}],"termid":"GO:0044431"}


id: GO:0032094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat.","definition_xrefs":["GOC:add","ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to food","termid":"GO:0032094"}


id: PBO:0070928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 36","termid":"PBO:0070928"}


id: FYECO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which linolenic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ linolenic acid","termid":"FYECO:0000051"}


id: GO:0089710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a endocytic signal sequence, a specific peptide sequence, of 4-6 amino acids with an essential tyrosine (Y), found on cytoplasmic tails of some cell surface membrane proteins, which directs internalization by clathrin-coated pits.","definition_xrefs":["PMID:8918456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"endocytic targeting sequence binding","termid":"GO:0089710"}


id: PBO:0018108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi to ER protein (predicted)","termid":"PBO:0018108"}


id: RO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of positively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"RO:0002334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulated_by","termid":"RO:0002336"}


id: PBO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific GPI anchored protein family","termid":"PBO:0000069"}


id: GO:1900867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sarcinapterin.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"methanopterin-containing compound metabolic process","termid":"GO:2001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"sarcinapterin metabolic process","synonyms":[{"name":"sarcinapterin metabolism","type":"exact"}],"termid":"GO:1900867"}


id: PBO:0075620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty related EVH1 domain containing 1","termid":"PBO:0075620"}


id: PBO:0090045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain superfamily protein","termid":"PBO:0090045"}


id: PBO:0048361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 72","termid":"PBO:0048361"}


id: PBO:0030635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_methionine_import_during_nitrogen_starvation","termid":"PBO:0030635"}


id: PBO:0071296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 19","termid":"PBO:0071296"}


id: FYPO:0001889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"RNA absent from cell","synonyms":[{"name":"transcripts absent from cell","type":"exact"},{"name":"undetectable cellular RNA level","type":"exact"}],"termid":"FYPO:0001889"}


id: PBO:0084138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity cyclic AMP phosphodiesterase; component of the cAMP-dependent protein kinase signaling system, protects the cell from extracellular cAMP, contains readthrough motif surrounding termination codon","termid":"PBO:0084138"}


id: GO:0061797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A gated channel activity that enables the transmembrane transfer of a chloride ion by a channel that opens in response to a change in pH.","definition_xrefs":["GOC:dph","PMID:27358471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"pH-gated monoatomic ion channel activity","termid":"GO:0160128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"pH-gated chloride channel activity","termid":"GO:0061797"}


id: PBO:0110376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL9R pseudogene 2","termid":"PBO:0110376"}


id: PBO:0052480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 7B","termid":"PBO:0052480"}


id: PBO:0045422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 2","termid":"PBO:0045422"}


id: CHEBI:84327
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torin 1","termid":"CHEBI:84327"}


id: PR:Q9HFR0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A COP9 signalosome complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10678:SF3","OMA:SCHPO00512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.04c","secondary_identifiers":["UniProtKB:Q9HFR0"],"synonyms":[{"name":"CSN complex subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SGN2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COPS2","type":"exact"}],"termid":"PR:Q9HFR0"}


id: PBO:0041879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CATIP antisense RNA 1","termid":"PBO:0041879"}


id: PBO:0064511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit J3","termid":"PBO:0064511"}


id: PBO:0073285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 6","termid":"PBO:0073285"}


id: GO:0042864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the siderochrome pyochelin (2-(2-o-hydroxyphenyl-2-thiazolin-4-yl)-3-methylthiazolidine-4-carboxylic acid).","definition_xrefs":["GOC:jl","PMID:6794030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"pyochelin metabolic process","termid":"GO:0042863"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"pyochelin biosynthetic process","secondary_identifiers":["GO:0031187","GO:0031188"],"synonyms":[{"name":"pyochelin anabolism","type":"exact"},{"name":"pyochelin biosynthesis","type":"exact"},{"name":"pyochelin biosynthetic process, peptide formation","type":"narrow"},{"name":"pyochelin biosynthetic process, peptide modification","type":"narrow"},{"name":"pyochelin formation","type":"exact"},{"name":"pyochelin synthesis","type":"exact"}],"termid":"GO:0042864"}


id: GO:0038070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation and activation of a MAP kinase kinase (MAPKK), as part of a MAPK signaling cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase kinase activity involved in cell wall organization or biogenesis (obsolete GO:0038070)","synonyms":[{"name":"MAP kinase kinase kinase activity involved in cell wall biogenesis","type":"exact"},{"name":"MAP3K activity involved in cell wall integrity","type":"exact"},{"name":"MAPKKK activity involved in cell wall integrity","type":"exact"}],"termid":"GO:0038070"}


id: PBO:0079954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP6 N-terminal like","termid":"PBO:0079954"}


id: PBO:0073930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 3","termid":"PBO:0073930"}


id: GO:0032515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of a phosphoprotein phosphatase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphoprotein phosphatase activity (obsolete GO:0032515)","synonyms":[{"name":"down regulation of calcineurin activity","type":"narrow"},{"name":"down regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"down regulation of protein phosphatase 2 activity","type":"related"},{"name":"down regulation of protein phosphatase 3 activity","type":"related"},{"name":"down regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"down regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"down-regulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"down-regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"down-regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"downregulation of calcineurin activity","type":"narrow"},{"name":"downregulation of phosphoprotein phosphatase activity","type":"exact"},{"name":"downregulation of protein phosphatase 2 activity","type":"related"},{"name":"downregulation of protein phosphatase 3 activity","type":"related"},{"name":"downregulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"downregulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"inhibition of calcineurin activity","type":"narrow"},{"name":"inhibition of phosphoprotein phosphatase activity","type":"narrow"},{"name":"inhibition of protein phosphatase 2 activity","type":"related"},{"name":"inhibition of protein phosphatase 3 activity","type":"related"},{"name":"inhibition of protein phosphatase type 2A activity","type":"narrow"},{"name":"inhibition of protein phosphatase type 2B activity","type":"narrow"},{"name":"negative regulation of calcineurin activity","type":"narrow"},{"name":"negative regulation of protein phosphatase 2 activity","type":"related"},{"name":"negative regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"negative regulation of protein phosphatase type 2B activity","type":"narrow"},{"name":"regulation of protein phosphatase 3 activity","type":"related"}],"termid":"GO:0032515"}


id: PBO:0078531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 24","termid":"PBO:0078531"}


id: PATO:0001431
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An emergent molecular quality that arises by virtue of the bearer's disposition to exhibit molecular attraction to another entity in contact.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesivity","synonyms":[{"name":"adhesiveness","type":"exact"},{"name":"stickiness","type":"related"}],"termid":"PATO:0001431"}


id: PBO:0066796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 95","termid":"PBO:0066796"}


id: FYPO:0005011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H4 acetylation occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone acetylation during vegetative growth","termid":"FYPO:0000331"},{"relation_name":"is_a","term_name":"abnormal histone H4 acetylation during vegetative growth","termid":"FYPO:0002364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H4 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H4 acetylation during mitotic cell cycle","type":"related"},{"name":"reduced histone H4 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005011"}


id: PBO:0077304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 43","termid":"PBO:0077304"}


id: SO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transmissible element containing genes involved in symbiosis, analogous to the pathogenicity islands of gram negative bacteria.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbiosis_island","synonyms":[{"name":"symbiosis island","type":"exact"}],"termid":"SO:0000776"}


id: PBO:0088597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific mitotic metaphase/anaphase APC coactivator Slp1/Cdc20","termid":"PBO:0088597"}


id: PBO:0088848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex subunit","termid":"PBO:0088848"}


id: PBO:0086158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for proper cell fusion and cell morphology; forms a complex with Bud14p and Kel2p that regulates Bnr1p (formin) to affect actin cable assembly, cytokinesis, and polarized growth; functions in a complex with Kel2p to negatively regulate mitotic exit, interacts with Tem1p and Lte1p; localizes to regions of polarized growth; potential Cdc28p substrate","termid":"PBO:0086158"}


id: SO:0000151
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A piece of DNA that has been inserted in a vector so that it can be propagated in a host bacterium or some other organism.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Clone_(genetics)"],"termid":"SO:0000151"}


id: PBO:0053824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1088","termid":"PBO:0053824"}


id: GO:0002671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell tolerance induction","termid":"GO:0002662"},{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte anergy","termid":"GO:0002912"},{"relation_name":"negatively_regulates","term_name":"B cell anergy","termid":"GO:0002515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell anergy","synonyms":[{"name":"down regulation of B cell anergy","type":"exact"},{"name":"down-regulation of B cell anergy","type":"exact"},{"name":"downregulation of B cell anergy","type":"exact"},{"name":"inhibition of B cell anergy","type":"narrow"},{"name":"negative regulation of B lymphocyte anergy","type":"exact"},{"name":"negative regulation of B-cell anergy","type":"exact"},{"name":"negative regulation of B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002671"}


id: PBO:0029030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body_during_interphase","termid":"PBO:0029030"}


id: FYPO:0000510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000301"],"is_obsolete":false,"name":"abnormal nuclear fusion during mating","synonyms":[{"name":"abnormal karyogamy","type":"exact"},{"name":"abnormal karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"abnormal nuclear fusion during conjugation","type":"exact"},{"name":"nuclear fusion during mating: abnormal","type":"related"}],"termid":"FYPO:0000510"}


id: PBO:0079108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22 domain family member 3","termid":"PBO:0079108"}


id: GO:0010965
data:
  {"annotated_genes":["SJAG_04126","SJAG_00883","SJAG_01330","SJAG_01082","SJAG_02380","SJAG_03048","SJAG_04884","SJAG_02169","SJAG_03353","SJAG_01297","SJAG_00666","SJAG_03681","SJAG_00460","SJAG_01837","SJAG_02451","SJAG_03126","SJAG_02336","SJAG_04968","SJAG_02498","SJAG_04699","SJAG_04573","SJAG_01805","SJAG_03350","SJAG_04259","SJAG_01679","SJAG_04999"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110436,112076,103365,109948,86754,108116,100015,104391,95676],"is_not":false,"rel_names":["negatively_regulates","is_a","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[106052,102442,86756,97890,109952,95522,112859,111728,110664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[111729,102443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[99391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[90245],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[112863],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[93770,96227,110936,98483,98208,107527,110437,89847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[112865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"},{"annotations":[95697,93771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901970"},{"annotations":[90246],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic sister chromatid separation. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome separation","termid":"GO:1905818"},{"relation_name":"regulates","term_name":"mitotic sister chromatid separation","termid":"GO:0051306"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03350":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010965","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0045842":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1901970":null,"GO:1902426":null,"GO:1905824":null,"GO:2000816":null}}


id: PBO:0043801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 1","termid":"PBO:0043801"}


id: PBO:0030816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_aconitate_hydratase_activity","termid":"PBO:0030816"}


id: PBO:0004516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyltransferase 1 (predicted)","termid":"PBO:0004516"}


id: GO:0106044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a sugar or dicarbonyl from a glycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanine deglycation","termid":"GO:0106044"}


id: GO:2000022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of jasmonic acid mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"jasmonic acid mediated signaling pathway","termid":"GO:0009867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of jasmonic acid mediated signaling pathway","synonyms":[{"name":"regulation of jasmonic acid mediated signalling pathway","type":"exact"}],"termid":"GO:2000022"}


id: PBO:0029164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation","termid":"PBO:0029164"}


id: GO:0046233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxyphenylacetate biosynthetic process (obsolete GO:0046233)","synonyms":[{"name":"3-hydroxyphenylacetate anabolism","type":"exact"},{"name":"3-hydroxyphenylacetate biosynthesis","type":"exact"},{"name":"3-hydroxyphenylacetate biosynthetic process","type":"exact"},{"name":"3-hydroxyphenylacetate formation","type":"exact"},{"name":"3-hydroxyphenylacetate synthesis","type":"exact"}],"termid":"GO:0046233"}


id: GO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body as part of an immune response.","definition_xrefs":["PMID:8600538","PMID:14680625","GOC:add","ISBN:0781735149","PMID:14708592","PMID:7507411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration involved in immune response","synonyms":[{"name":"immune cell migration during immune response","type":"exact"},{"name":"immune cell trafficking during immune response","type":"exact"},{"name":"leucocyte migration during immune response","type":"exact"},{"name":"leucocyte trafficking during immune response","type":"exact"},{"name":"leukocyte trafficking during immune response","type":"exact"}],"termid":"GO:0002522"}


id: PBO:0073356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family D member 1","termid":"PBO:0073356"}


id: GO:0097403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a raffinose stimulus.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"},{"relation_name":"is_a","term_name":"response to raffinose","termid":"GO:1901545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to raffinose","termid":"GO:0097403"}


id: FYPO:0000773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which pre-replicative complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abnormal pre-replicative complex assembly","synonyms":[{"name":"abnormal pre-RC assembly","type":"exact"},{"name":"abnormal pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal pre-replicative complex assembly during vegetative growth","type":"exact"},{"name":"abnormal pre-replicative complex formation","type":"exact"}],"termid":"FYPO:0000773"}


id: GO:0009595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a biotic stimulus, one caused or produced by a living organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of biotic stimulus","secondary_identifiers":["GO:0009596"],"synonyms":[{"name":"perception of biotic stimulus","type":"related"}],"termid":"GO:0009595"}


id: PBO:0002875
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.4.1","termid":"PBO:0002875"}


id: GO:1903005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein K63-linked deubiquitination.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:22970133","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein deubiquitination","termid":"GO:0090086"},{"relation_name":"is_a","term_name":"regulation of protein K63-linked deubiquitination","termid":"GO:1903004"},{"relation_name":"negatively_regulates","term_name":"protein K63-linked deubiquitination","termid":"GO:0070536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein K63-linked deubiquitination","synonyms":[{"name":"down regulation of protein K63-linked deubiquitination","type":"exact"},{"name":"down-regulation of protein K63-linked deubiquitination","type":"exact"},{"name":"downregulation of protein K63-linked deubiquitination","type":"exact"},{"name":"inhibition of protein K63-linked deubiquitination","type":"narrow"}],"termid":"GO:1903005"}


id: MOD:01391
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-valine residue, and C-5 methoxymethylates to form L-valine 5-(methoxymethyl)thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0468","PubMed:10625477","PubMed:1880060","PubMed:7844053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine 5-(methoxymethyl)thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-methylpropyl]-5-(methoxymethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-methylpropyl]-5-(methoxymethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-(methoxymethyl)thiazole-4-carboxylic acid (Val-Cys)","type":"exact"},{"name":"L-valine 5-(methoxymethyl)thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01391"}


id: PBO:0027742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_camptothecin","termid":"PBO:0027742"}


id: PBO:0064084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITH domain containing 1","termid":"PBO:0064084"}


id: MOD:00323
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysine methyl ester.","definition_xrefs":["Unimod:34#C-term","PubMed:10973948","PubMed:11875433","RESID:AA0318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-lysine","termid":"MOD:01683"},{"relation_name":"is_a","term_name":"alpha-carboxyl methylated residue","termid":"MOD:01689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-lysine methyl ester","synonyms":[{"name":"2,6-diaminohexanoic methyl ester","type":"exact"},{"name":"L-lysine methyl ester","type":"exact"},{"name":"MOD_RES Lysine methyl ester","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"OMeLys","type":"exact"},{"name":"alpha,epsilon-diaminocaproic methyl ester","type":"exact"},{"name":"methyl (S)-2,6-diaminohexanoate","type":"exact"},{"name":"methyl L-lysinate","type":"exact"},{"name":"methyl esterified L-lysine","type":"exact"}],"termid":"MOD:00323"}


id: PBO:0057692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1282","termid":"PBO:0057692"}


id: GO:0031407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any oxylipin, any of a group of biologically active compounds formed by oxidative metabolism of polyunsaturated fatty acids.","definition_xrefs":["GOC:mah","PMID:11960741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"oxylipin metabolic process","synonyms":[{"name":"oxylipin metabolism","type":"exact"}],"termid":"GO:0031407"}


id: PBO:0049958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 4","termid":"PBO:0049958"}


id: PBO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Xdj1 (predicted)","termid":"PBO:0004381"}


id: PR:Q9US52
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere bouquet protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.06c","synonyms":[{"name":"Spom972h-bqt2","type":"exact"},{"name":"meiotic chromosome segregation protein bqt2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 18 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US52"}


id: PBO:0053438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 383","termid":"PBO:0053438"}


id: PBO:0040721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL10 immune signaling adaptor","termid":"PBO:0040721"}


id: PBO:0004323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf22","termid":"PBO:0004323"}


id: PBO:0079865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase pseudogene 2","termid":"PBO:0079865"}


id: PBO:0081024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 6","termid":"PBO:0081024"}


id: PBO:0046296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMSY transcriptional repressor, BRCA2 interacting","termid":"PBO:0046296"}


id: PBO:0081330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 131","termid":"PBO:0081330"}


id: GO:1900833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-leucine.","definition_xrefs":["PMID:10918062","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"},{"relation_name":"is_a","term_name":"D-amino acid biosynthetic process","termid":"GO:0046437"},{"relation_name":"is_a","term_name":"D-leucine metabolic process","termid":"GO:1900831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-leucine biosynthetic process","synonyms":[{"name":"D-leucine anabolism","type":"exact"},{"name":"D-leucine biosynthesis","type":"exact"},{"name":"D-leucine formation","type":"exact"},{"name":"D-leucine synthesis","type":"exact"}],"termid":"GO:1900833"}


id: GO:1901883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 4-hydroxycoumarin.","definition_xrefs":["GOC:TermGenie","PMID:19757094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin catabolic process","termid":"GO:0046226"},{"relation_name":"is_a","term_name":"4-hydroxycoumarin metabolic process","termid":"GO:1901882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"4-hydroxycoumarin catabolic process","synonyms":[{"name":"4-hydroxycoumarin breakdown","type":"exact"},{"name":"4-hydroxycoumarin catabolism","type":"exact"},{"name":"4-hydroxycoumarin degradation","type":"exact"}],"termid":"GO:1901883"}


id: GO:0047097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + phylloquinone = 2,3-epoxyphylloquinone + A + H2O.","definition_xrefs":["RHEA:16745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"phylloquinone monooxygenase (2,3-epoxidizing) activity","secondary_identifiers":["EC:1.14.99.20","KEGG_REACTION:R03510","MetaCyc:1.14.99.20-RXN"],"synonyms":[{"name":"phylloquinone epoxidase activity","type":"related"},{"name":"phylloquinone,hydrogen-donor:oxygen oxidoreductase (2,3-epoxidizing)","type":"related"},{"name":"vitamin K 2,3-epoxidase activity","type":"related"},{"name":"vitamin K epoxidase activity","type":"related"},{"name":"vitamin K1 epoxidase activity","type":"related"}],"termid":"GO:0047097"}


id: PBO:0113120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER integral membrane protein, ERMES complex subunit; ERMES links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; required for mitophagy; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase; localizes to the peroxisome in glucose","termid":"PBO:0113120"}


id: PATO:0000780
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000780 relative locomotor activity value (obsolete PATO:0000780)","termid":"PATO:0000780"}


id: PBO:0072477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 6","termid":"PBO:0072477"}


id: FYPO:0004253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a nuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased nuclease activity","synonyms":[{"name":"reduced nuclease activity","type":"exact"}],"termid":"FYPO:0004253"}


id: PBO:0071446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 52","termid":"PBO:0071446"}


id: MOD:01847
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine sulfinyl phosphate.","definition_xrefs":["PubMed:16565085","RESID:AA0557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine sulfinyl phosphate","synonyms":[{"name":"(2R)-2-amino-3-[(phosphonooxy)sulfinyl]propanoic acid","type":"exact"},{"name":"L-cysteine sulfinyl phosphate","type":"exact"},{"name":"cysteine sulfinic phosphoryl ester","type":"exact"}],"termid":"MOD:01847"}


id: GO:0045450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which bicoid mRNA is transported to and maintained within the oocyte as part of the specification of the anterior/posterior axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"},{"relation_name":"part_of","term_name":"oocyte anterior/posterior axis specification","termid":"GO:0007314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"bicoid mRNA localization","synonyms":[{"name":"bicoid mRNA localisation","type":"exact"},{"name":"establishment and maintenance of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045450"}


id: PBO:0079880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 1B","termid":"PBO:0079880"}


id: PR:O60184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssn6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcriptional corepressor ssn6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.09","synonyms":[{"name":"Spom972h-ssn6","type":"exact"}],"termid":"PR:O60184"}


id: PBO:0058529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6074","termid":"PBO:0058529"}


id: PR:O42967
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1E8.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ubiquitin-like protein C1E8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1E8.02","synonyms":[{"name":"Spom972h-SPBC1E8.02","type":"exact"}],"termid":"PR:O42967"}


id: GO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ring-shaped structure that forms at the site of cytokinesis in the bud neck of a budding cell; composed of members of the conserved family of filament forming proteins called septins as well as septin-associated proteins. In S. cerevisiae, this structure forms at the time of bud emergence and the septins show a high rate of exchange.","definition_xrefs":["PMID:16009555","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud neck septin structure","termid":"GO:0000399"},{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"cellular bud neck septin ring","termid":"GO:0000144"}


id: PBO:0057204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 374c","termid":"PBO:0057204"}


id: GO:0014716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Skeletal muscle satellite cell asymmetric division that occurs during a process in which damaged muscle tissue is being rebuilt.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle satellite stem cell asymmetric division","termid":"GO:0014833"},{"relation_name":"part_of","term_name":"skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration","termid":"GO:0014834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite stem cell asymmetric division involved in skeletal muscle regeneration","synonyms":[{"name":"satellite cell asymmetric division involved in skeletal muscle regeneration","type":"exact"}],"termid":"GO:0014716"}


id: PBO:0083682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal Rab family GTPase; required for vacuolar protein sorting, endocytosis and multivesicular body (MVB) biogenesis and sorting; required for localization of the CORVET complex to endosomes; involved in autophagy and ionic stress tolerance; similar to Vps21p and Ypt53p; mammalian Rab5 homolog; protein abundance increases in response to DNA replication stress","termid":"PBO:0083682"}


id: GO:1990076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell wall polysaccharide catabolic process that is involved in abscission.","definition_xrefs":["GOC:TermGenie","PMID:23479623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"},{"relation_name":"part_of","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"cell wall polysaccharide catabolic process involved in abscission","termid":"GO:1990076"}


id: GO:0071375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to peptide hormone stimulus","synonyms":[{"name":"cellular response to polypeptide hormone stimulus","type":"exact"}],"termid":"GO:0071375"}


id: PBO:0050303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 5","termid":"PBO:0050303"}


id: GO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the process of heart jogging.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in heart jogging (obsolete GO:0003303)","synonyms":[{"name":"BMP signalling pathway involved in heart jogging","type":"exact"}],"termid":"GO:0003303"}


id: GO:0016703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and one oxygen atom is incorporated into a donor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","secondary_identifiers":["EC:1.13.12.-"],"termid":"GO:0016703"}


id: GO:0070125
data:
  {"annotated_genes":["SJAG_04862","SJAG_04064","SJAG_05271","SJAG_03461","SJAG_02353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77642,98994,107678,108303,109030],"is_not":false,"summary":null,"term":"GO:0070125"}]},"cv_name":"biological_process","definition":"The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02353":null,"SJAG_03461":null,"SJAG_04064":null,"SJAG_04862":null,"SJAG_05271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial translational elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial translation elongation","type":"exact"}],"termid":"GO:0070125","terms_by_termid":{"GO:0070125":null}}


id: FYPO:0001144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man8GlcNAc2 measured in a cell is lower than normal. Man8GlcNAc2 is any N-glycan that consists of a branched ten-membered mannooligosaccharide containing eight D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["PMID:12686557","PomBase:mah","CHEBI:64048","CHEBI:64052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased Man8GlcNAc level","synonyms":[{"name":"decreased Man8GlcNAc accumulation","type":"related"},{"name":"decreased Man8GlcNAc level during mitotic cell cycle","type":"related"},{"name":"decreased Man8GlcNAc level during vegetative growth","type":"exact"},{"name":"decreased Man8GlcNAc2 level","type":"exact"},{"name":"decreased cellular Man8GlcNAc level","type":"exact"},{"name":"reduced Man8GlcNAc level","type":"exact"}],"termid":"FYPO:0001144"}


id: PBO:0057219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378g","termid":"PBO:0057219"}


id: GO:0016748
data:
  {"annotated_genes":["SJAG_00097","SJAG_03961","SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77280,91835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003870"},{"annotations":[108228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004149"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl (3-carboxypropanoyl) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_03163":null,"SJAG_03961":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"succinyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016748","terms_by_termid":{"GO:0003870":null,"GO:0004149":null}}


id: GO:1905959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to alcohol.","definition_xrefs":["GOC:TermGenie","PMID:26434723","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"is_a","term_name":"regulation of cellular response to alcohol","termid":"GO:1905957"},{"relation_name":"positively_regulates","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to alcohol","synonyms":[{"name":"activation of cellular response to alcohol","type":"narrow"},{"name":"up regulation of cellular response to alcohol","type":"exact"},{"name":"up-regulation of cellular response to alcohol","type":"exact"},{"name":"upregulation of cellular response to alcohol","type":"exact"}],"termid":"GO:1905959"}


id: GO:0002633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of granuloma formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granuloma formation","termid":"GO:0002631"},{"relation_name":"is_a","term_name":"positive regulation of chronic inflammatory response","termid":"GO:0002678"},{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"positively_regulates","term_name":"granuloma formation","termid":"GO:0002432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of granuloma formation","synonyms":[{"name":"activation of granuloma formation","type":"narrow"},{"name":"stimulation of granuloma formation","type":"narrow"},{"name":"up regulation of granuloma formation","type":"exact"},{"name":"up-regulation of granuloma formation","type":"exact"},{"name":"upregulation of granuloma formation","type":"exact"}],"termid":"GO:0002633"}


id: PBO:0071371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 30","termid":"PBO:0071371"}


id: FYPO:0001171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular pH","synonyms":[{"name":"decreased cellular pH during mitotic cell cycle","type":"related"},{"name":"decreased cellular pH during vegetative growth","type":"exact"},{"name":"decreased cellular pH level","type":"exact"},{"name":"reduced cellular pH","type":"exact"}],"termid":"FYPO:0001171"}


id: PBO:0086164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for rRNA maturation and ribosomal subunit biogenesis; required for 18S rRNA maturation; also required for small ribosomal subunit biogenesis; cosediments with pre-ribosomal particles; mutation decreases efficiency of +1 Ty1 frameshifting and transposition, and affects budding pattern","termid":"PBO:0086164"}


id: PBO:0039270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldolase, fructose-bisphosphate B","termid":"PBO:0039270"}


id: PBO:0071053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 55","termid":"PBO:0071053"}


id: GO:0090565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannitol(out) = protein cysteine + mannitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003824","GO:0005215","GO:0022857","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-phosphocysteine-mannitol phosphotransferase system transporter activity","termid":"GO:0090565"}


id: PBO:0076212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ubiquitin like modifier 3","termid":"PBO:0076212"}


id: FYPO:0000547
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein modification is increased. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"increased protein modification","termid":"FYPO:0002499"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null,"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased protein modification during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"increased protein modification during mitotic cell cycle","type":"related"},{"name":"increased protein/peptide modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000547","terms_by_termid":{"FYPO:0001038":null}}


id: PBO:0070045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 2, pseudogene","termid":"PBO:0070045"}


id: GO:0070690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) into glycine and acetaldehyde, with acetaldehyde being subsequently converted to acetyl-CoA.","definition_xrefs":["GOC:bf","GOC:mah","MetaCyc:PWY-5436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"threonine catabolic process","termid":"GO:0006567"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006520","GO:0044248","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"L-threonine catabolic process to acetyl-CoA","synonyms":[{"name":"L-threonine breakdown to acetyl-CoA","type":"exact"},{"name":"L-threonine catabolism to acetyl-CoA","type":"exact"},{"name":"L-threonine degradation to acetyl-CoA","type":"exact"},{"name":"threonine catabolic process to acetyl-CoA","type":"broad"}],"termid":"GO:0070690"}


id: PBO:0061245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA activated by DNA damage","termid":"PBO:0061245"}


id: FYPO:0002343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing terbinafine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on terbinafine","synonyms":[{"name":"normal cell population growth in presence of terbinafine","type":"exact"},{"name":"normal cell population growth on terbinafine","type":"exact"},{"name":"normal cellular response to terbinafine","type":"related"},{"name":"normal vegetative cell population growth on terbinafine","type":"exact"}],"termid":"FYPO:0002343"}


id: GO:0038026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of reelin (a secreted glycoprotein) to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12827279","PMID:20223215","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"reelin-mediated signaling pathway","synonyms":[{"name":"reeler-mediated signaling pathway","type":"exact"},{"name":"reelin-mediated signal transduction pathway","type":"exact"},{"name":"reelin-mediated signalling pathway","type":"exact"}],"termid":"GO:0038026"}


id: SO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The RNA component of Ribonuclease P (RNase P), a ubiquitous endoribonuclease, found in archaea, bacteria and eukarya as well as chloroplasts and mitochondria. Its best characterized activity is the generation of mature 5 prime ends of tRNAs by cleaving the 5 prime leader elements of precursor-tRNAs. Cellular RNase Ps are ribonucleoproteins. RNA from bacterial RNase Ps retains its catalytic activity in the absence of the protein subunit, i.e. it is a ribozyme. Isolated eukaryotic and archaeal RNase P RNA has not been shown to retain its catalytic function, but is still essential for the catalytic activity of the holoenzyme. Although the archaeal and eukaryotic holoenzymes have a much greater protein content than the bacterial ones, the RNA cores from all the three lineages are homologous. Helices corresponding to P1, P2, P3, P4, and P10/11 are common to all cellular RNase P RNAs. Yet, there is considerable sequence variation, particularly among the eukaryotic RNAs.","direct_ancestors":[{"relation_name":"is_a","term_name":"enzymatic_RNA","termid":"SO:0000372"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase_P_RNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:RNase_P_RNA","type":"exact"},{"name":"RNase P RNA","type":"exact"}],"termid":"SO:0000386"}


id: PBO:0084042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI inositol deacylase of the endoplasmic reticulum (ER); negatively regulates COPII vesicle formation; prevents production of vesicles with defective subunits; required for proper discrimination between resident ER proteins and Golgi-bound cargo molecules; functional ortholog of human PGAP1, mutation of which is associated with intellectual disability and encephalopathy","termid":"PBO:0084042"}


id: GO:1990147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a talin, a family of related cytoskeletal proteins that play a role in assembly of actin filaments and migration of various cell types.","definition_xrefs":["GOC:hjd","PMID:23372168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"talin binding","termid":"GO:1990147"}


id: FYPO:0005060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break resection is normal (i.e. indistinguishable from wild type). Meiotic DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["GO:1990899","PMID:26130711","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic DNA double-strand break resection","synonyms":[{"name":"normal meiotic DNA double-strand break resectioning","type":"exact"}],"termid":"FYPO:0005060"}


id: PBO:0078884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-1","termid":"PBO:0078884"}


id: GO:1903843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenite ion stimulus.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:12106899","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to arsenic-containing substance","termid":"GO:0071243"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to arsenite ion","termid":"GO:1903842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to arsenite ion","termid":"GO:1903843"}


id: GO:1903494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dehydroepiandrosterone stimulus.","definition_xrefs":["PMID:3585228","GO_REF:0000071","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dehydroepiandrosterone","termid":"GO:1903494"}


id: PBO:0036546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein, human C6orf136 ortholog","termid":"PBO:0036546"}


id: GO:0098794
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a synapse that is part of the post-synaptic cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynapse","termid":"GO:0098794"}


id: PBO:0083981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamate decarboxylase; converts glutamate into gamma-aminobutyric acid (GABA) during glutamate catabolism; involved in response to oxidative stress","termid":"PBO:0083981"}


id: PBO:0030641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_glucose_carbon_source","termid":"PBO:0030641"}


id: PBO:0073104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress responsive DNAJB4 interacting membrane protein 1","termid":"PBO:0073104"}


id: GO:0032364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of oxygen within a cell.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular oxygen homeostasis","synonyms":[{"name":"cellular oxygen homeostasis","type":"exact"},{"name":"oxygen homeostasis","type":"broad"}],"termid":"GO:0032364"}


id: PATO:0000807
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000807 proprioreception value (obsolete PATO:0000807)","termid":"PATO:0000807"}


id: PR:O60097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt8 gene.","definition_xrefs":["UniProtKB:O60097","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor spt8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.17c","synonyms":[{"name":"Spom972h-spt8","type":"exact"}],"termid":"PR:O60097"}


id: GO:0018881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bromoxynil, C7H3Br2NO, a dibrominated phenol derivative with a cyano (-CN) group attached. Bromoxynil is used as a herbicide for post-emergent control of annual broadleaf weeds and works by inhibiting photosynthesis in the target plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bromoxynil metabolic process","secondary_identifiers":["UM-BBD_pathwayID:box"],"synonyms":[{"name":"bromoxynil metabolism","type":"exact"}],"termid":"GO:0018881"}


id: FYPO:0002657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) occurs to the same extent as in wild-type cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal NETO","termid":"FYPO:0001396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal occurrence of NETO","synonyms":[{"name":"normal NETO frequency","type":"exact"},{"name":"normal NETO occurrence","type":"exact"},{"name":"normal frequency of NETO","type":"exact"},{"name":"normal occurrence of NETO during mitotic cell cycle","type":"related"},{"name":"normal occurrence of NETO during vegetative growth","type":"exact"},{"name":"normal occurrence of activation of bipolar cell growth","type":"related"},{"name":"normal occurrence of cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"normal occurrence of new end take-off","type":"exact"},{"name":"normal occurrence of switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0002657"}


id: PBO:0054503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1903","termid":"PBO:0054503"}


id: PBO:0047007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A10","termid":"PBO:0047007"}


id: GO:0050972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in echolocation in which a mechanical stimulus is received and converted into a molecular signal. The stimulus is in the form of a reflected sound wave (an echo), which the organism uses to determine the distance to the object that reflected the sound wave.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"echolocation","termid":"GO:0050959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in echolocation","synonyms":[{"name":"echolocation, detection of mechanical stimulus","type":"exact"},{"name":"echolocation, sensory detection of mechanical stimulus","type":"exact"},{"name":"echolocation, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during echolocation","type":"exact"},{"name":"sensory transduction of mechanical stimulus during echolocation","type":"exact"}],"termid":"GO:0050972"}


id: PBO:0041647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit alpha2delta 2","termid":"PBO:0041647"}


id: PBO:0046902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member A","termid":"PBO:0046902"}


id: PBO:0077553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 259","termid":"PBO:0077553"}


id: PATO:0002494
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed distally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal orientation","synonyms":[{"name":"distally directed","type":"exact"}],"termid":"PATO:0002494"}


id: FYPO:0003766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial DNA molecules are interlinked by unresolved recombination junctions.","definition_xrefs":["PomBase:mah","PMID:10954073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0005447","FYPO:0000641","FYPO:0000652","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"aggregated mtDNA","synonyms":[{"name":"aggregated mitochondrial DNA","type":"exact"},{"name":"aggregated mitochondrial chromosomes","type":"exact"},{"name":"aggregated mtDNA during mitotic cell cycle","type":"related"},{"name":"aggregated mtDNA during vegetative growth","type":"exact"},{"name":"fused mitochondrial chromosomes","type":"related"},{"name":"fused mtDNA","type":"related"},{"name":"interlinked mtDNA","type":"exact"}],"termid":"FYPO:0003766"}


id: GO:0044309
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small membranous protrusion, often ending in a bulbous head and attached to the neuron by a narrow stalk or neck.","definition_xrefs":["ISBN:0198504888","NIF_Subcellular:sao1145756102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuron spine","synonyms":[{"name":"spine","type":"broad"}],"termid":"GO:0044309"}


id: GO:0052522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of phagocytosis in other organism involved in symbiotic interaction (obsolete GO:0052522)","synonyms":[{"name":"activation by organism of phagocytosis in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"stimulation by organism of phagocytosis in other organism during symbiotic interaction","type":"narrow"},{"name":"up regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"up-regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"upregulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052522"}


id: PBO:0059795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 21","termid":"PBO:0059795"}


id: GO:2000277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidative phosphorylation uncoupler activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"},{"relation_name":"is_a","term_name":"regulation of oxidative phosphorylation uncoupler activity","termid":"GO:2000275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of oxidative phosphorylation uncoupler activity","synonyms":[{"name":"positive regulation of mitochondrial uncoupling protein activity","type":"related"},{"name":"positive regulation of uncoupling protein activity","type":"related"}],"termid":"GO:2000277"}


id: PBO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn9","termid":"PBO:0001307"}


id: GO:0102188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-methyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) + H+ = 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-methyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102188)","termid":"GO:0102188"}


id: PBO:0043188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2","termid":"PBO:0043188"}


id: GO:2000775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any histone H3-S10 phosphorylation that is involved in chromosome condensation.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-S10 phosphorylation involved in chromosome condensation (obsolete GO:2000775)","synonyms":[{"name":"histone H3 phosphorylation at S10 of chromosome condensation","type":"exact"},{"name":"histone H3-S10 phosphorylation of chromosome condensation","type":"exact"}],"termid":"GO:2000775"}


id: GO:0120063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs throughout the length of the stomach.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastro-intestinal system smooth muscle contraction","termid":"GO:0014831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach smooth muscle contraction","termid":"GO:0120063"}


id: GO:0030681
data:
  {"annotated_genes":["SJAG_00955","SJAG_03234","SJAG_03796","SJAG_04582","SJAG_02547","SJAG_01623","SJAG_04916","SJAG_01369","SJAG_06613","SJAG_00306","SJAG_02553"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90748,114772,111564,109650,98148,100889,87111,111476,95575,92857,100669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005655"}]},"cv_name":"cellular_component","definition":"A ribonuclease P complex that generally contains a single RNA molecule and several protein molecules. Examples of this complex are found in Archaeal species.","definition_xrefs":["PMID:11142368","GOC:mah","PMID:12045094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease P complex","termid":"GO:0030677"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00955":null,"SJAG_01369":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"multimeric ribonuclease P complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"multimeric RNase P complex","type":"exact"}],"termid":"GO:0030681","terms_by_termid":{"GO:0005655":null}}


id: PBO:0088793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Erd1 homolog","termid":"PBO:0088793"}


id: PBO:0062059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 6 pseudogene","termid":"PBO:0062059"}


id: FYPO:0004883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is abnormal. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1990023","PomBase:mah","GO:1902967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle midzone","synonyms":[{"name":"abnormal protein localisation to mitotic spindle midzone","type":"exact"},{"name":"abnormal protein localization to spindle midzone during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to spindle midzone during vegetative growth","type":"exact"}],"termid":"FYPO:0004883"}


id: PBO:0085612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA repair; related to the human CSA protein that is involved in transcription-coupled repair nucleotide excision repair","termid":"PBO:0085612"}


id: PBO:0049590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 8","termid":"PBO:0049590"}


id: PBO:0083891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; also part of the nuclear pore complex (NPC) cytoplasmic filaments; contributes directly to nucleocytoplasmic transport; regulates ADP release from the ATP-dependent RNA helicase Dbp5p; forms a stable association with Nup82p, Gle2p and two other FG-nucleoporins (Nsp1p and Nup116p)","termid":"PBO:0083891"}


id: GO:0033429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"CGU codon-amino acid adaptor activity","synonyms":[{"name":"CGT codon-amino acid adaptor activity","type":"exact"},{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033429"}


id: PR:O14333
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylserine decarboxylase proenzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10067:SF0","OMA:SCHPO03068","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase proenzyme 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.18","secondary_identifiers":["UniProtKB:O14333"],"synonyms":[{"name":"Spom972h-PISD","type":"exact"}],"termid":"PR:O14333"}


id: GO:0061568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into GDP, guanosine diphosphate, to produce GTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"gene_count":0,"genotype_count":0,"name":"obsolete GDP phosphorylation (obsolete GO:0061568)","termid":"GO:0061568"}


id: FYPO:0007162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of karyogamy involved in conjugation with cellular fusion is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear fusion during mating","termid":"FYPO:0000510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000301","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of nuclear fusion during mating","synonyms":[{"name":"increased duration of karyogamy","type":"exact"},{"name":"increased duration of karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"prolonged nuclear fusion during mating","type":"exact"}],"termid":"FYPO:0007162"}


id: GO:0070312
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nucleotide-excision repair complex formed by the association of the heterodimeric endonuclease XPF/ERCC4-ERCC1 (Rad1p and Rad10p in S. cerevisiae) with the RAD52 protein.","definition_xrefs":["PMID:14734547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RAD52-ERCC4-ERCC1 complex","termid":"GO:0070312"}


id: PBO:0083522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF PEX14/YGL153W","termid":"PBO:0083522"}


id: GO:0033515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including alpha-aminoadipate; in this pathway, L-lysine is converted to 2-aminoadipate-6-semialdehyde by lysine 6-aminotransferase.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006790","GO:0008150","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"L-lysine catabolic process using lysine 6-aminotransferase","synonyms":[{"name":"L-lysine breakdown using lysine 6-aminotransferase","type":"exact"},{"name":"L-lysine degradation using lysine 6-aminotransferase","type":"exact"}],"termid":"GO:0033515"}


id: FYPO:0007858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes one or more rounds of rereplication of the entire genome without forming a mitotic spindle or undergoing cytokinesis.","definition_xrefs":["PMID:20967237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"mitotic DNA re-replication in absence of mitotic spindle","synonyms":[{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle","type":"exact"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle during vegetative growth","type":"exact"},{"name":"mitotic DNA re-replication in the absence of normal mitotic spindle assembly and cytokinesis","type":"exact"}],"termid":"FYPO:0007858"}


id: PBO:0024818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of cut TWenty","termid":"PBO:0024818"}


id: PBO:0052543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein B1","termid":"PBO:0052543"}


id: FYPO:0005896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin during mitotic G1 phase","synonyms":[{"name":"decreased protein localisation to chromatin during mitotic G1 phase","type":"exact"},{"name":"decreased protein localization to chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin during G1 phase of mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005896"}


id: PBO:0044785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEF6 guanine nucleotide exchange factor","termid":"PBO:0044785"}


id: PBO:0087826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIE small subunit; involved in RNA polymerase II transcription initiation","termid":"PBO:0087826"}


id: PBO:0038931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor L4","termid":"PBO:0038931"}


id: PBO:0060215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major vault protein","termid":"PBO:0060215"}


id: SO:0002334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon with the DNA sequence TAA.","direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon","termid":"SO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ochre_stop_codon","synonyms":[{"name":"Ochre stop codon","type":"exact"}],"termid":"SO:0002334"}


id: FYPO:0004439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is curved (i.e. follows a smooth bend rather than a straight line) and longer than normal during anaphase.","definition_xrefs":["PomBase:mah","PMID:17352737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002399","FYPO:0000002","FYPO:0000120","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"long curved mitotic spindle during anaphase","synonyms":[{"name":"curved mitotic spindle with increased mitotic spindle length during anaphase","type":"exact"},{"name":"elongated curved mitotic spindle during anaphase","type":"exact"},{"name":"long curved bipolar mitotic spindle during anaphase","type":"exact"},{"name":"long curved mitotic spindle during anaphase during vegetative growth","type":"exact"},{"name":"long curved mitotic spindles during anaphase","type":"exact"},{"name":"long curved spindle during anaphase of mitosis","type":"exact"},{"name":"long curved spindle during mitotic anaphase","type":"exact"},{"name":"long mitotic spindle during anaphase, elongating beyond cell end resulting in long curved spindle","type":"exact"}],"termid":"FYPO:0004439"}


id: GO:0098018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the viral capsid that comprises the less common capsomere type. For example, in a T=3 icosahedral capsid, which is composed of 12 pentameric and 20 hexameric capsomeres, the pentameric capsomeres are minor subunits.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capsomere","termid":"GO:0046727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, minor subunit","synonyms":[{"name":"minor capsomere","type":"exact"},{"name":"minor head protein","type":"related"}],"termid":"GO:0098018"}


id: PATO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being oblong, with the lower end very much attenuated.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oblong","termid":"PATO:0000946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatulate","synonyms":[{"name":"spathulate","type":"exact"}],"termid":"PATO:0001937"}


id: GO:0010198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synergid cells undergo degeneration and death in response to penetration by the pollen tube. It is an active process that involves a dramatic decrease in cell volume, collapse of the vacuoles, and complete disintegration of the plasma membrane and most organelles.","definition_xrefs":["GOC:isa_complete","GOC:sm","PMID:12215516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synergid death","secondary_identifiers":["GO:0048470"],"synonyms":[{"name":"synergid cell death","type":"exact"},{"name":"synergid degeneration","type":"exact"}],"termid":"GO:0010198"}


id: PBO:0003867
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.24.64","termid":"PBO:0003867"}


id: PBO:0057113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 200b","termid":"PBO:0057113"}


id: PBO:0038314
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_initial_curator_email","termid":"PBO:0038314"}


id: GO:0046823
data:
  {"annotated_genes":["SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances between the cytoplasm and the nucleus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"negatively_regulates","term_name":"nucleocytoplasmic transport","termid":"GO:0006913"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"negative regulation of nucleocytoplasmic transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of nucleocytoplasmic transport","type":"exact"},{"name":"down-regulation of nucleocytoplasmic transport","type":"exact"},{"name":"downregulation of nucleocytoplasmic transport","type":"exact"},{"name":"inhibition of nucleocytoplasmic transport","type":"narrow"}],"termid":"GO:0046823","terms_by_termid":{"GO:0042308":null}}


id: PBO:0084550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; active during alcoholic fermentation, regulated by anaerobiosis, inhibited by oxygen, repressed by heme","termid":"PBO:0084550"}


id: SO:1000057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The changed codon has the same translation product as the original codon.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000057 sequence_variant_causing_synonymous_codon_change_in_transcript (obsolete SO:1000057)","synonyms":[{"name":"mutation causing synonymous codon change in transcript","type":"related"},{"name":"sequence variant causing synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000057"}


id: GO:0047407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-ribosyl-[dinitrogen reductase] = adenosine diphosphate ribose + [dinitrogen reductase].","definition_xrefs":["MetaCyc:3.2.2.24-RXN","EC:3.2.2.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"ADP-ribosyl-[dinitrogen reductase] hydrolase activity","secondary_identifiers":["RHEA:14493"],"synonyms":[{"name":"ADP-D-ribosyl-dinitrogen reductase ADP-ribosylhydrolase activity","type":"related"},{"name":"ADP-ribosyl glycohydrolase activity","type":"related"},{"name":"ADP-ribosyl-dinitrogen reductase hydrolase activity","type":"related"},{"name":"azoferredoxin glycosidase activity","type":"related"},{"name":"azoferredoxin-activating enzymes","type":"related"},{"name":"dinitrogenase reductase activating glycohydrolase activity","type":"related"},{"name":"dinitrogenase reductase-activating glycohydrolase activity","type":"related"}],"termid":"GO:0047407"}


id: PBO:0077632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-mannosyltransferase targeting cadherins 4","termid":"PBO:0077632"}


id: GO:0016093
data:
  {"annotated_genes":["SJAG_00554","SJAG_02163","SJAG_02903","SJAG_04954","SJAG_05219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104151,96097,93852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[92487,102841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019348"},{"annotations":[61002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["PMID:11108713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_02163":null,"SJAG_02903":null,"SJAG_04954":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"polyprenol metabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyprenol metabolism","type":"exact"}],"termid":"GO:0016093","terms_by_termid":{"GO:0016095":null,"GO:0019348":null,"GO:0019408":null}}


id: PR:O13907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.16 gene.","definition_xrefs":["UniProtKB:O13907","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.16","synonyms":[{"name":"ATP-citrate (pro-S-)-lyase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC22A12.16","type":"exact"},{"name":"citrate cleavage enzyme subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13907"}


id: PBO:0078736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase O","termid":"PBO:0078736"}


id: PBO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2539","termid":"PBO:0055120"}


id: GO:0075292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of aplanospore formation, a process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporangiospore formation","termid":"GO:0075288"},{"relation_name":"is_a","term_name":"regulation of aplanospore formation","termid":"GO:0075290"},{"relation_name":"negatively_regulates","term_name":"aplanospore formation","termid":"GO:0075289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aplanospore formation","termid":"GO:0075292"}


id: PBO:0029361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_periphery","termid":"PBO:0029361"}


id: PBO:0067507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 647, pseudogene","termid":"PBO:0067507"}


id: GO:0031598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The regulatory subcomplex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle","termid":"GO:0005838"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome complex","termid":"GO:0031595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nuclear proteasome regulatory particle","termid":"GO:0031598"}


id: GO:0050785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with advanced glycation end-products and transmitting the signal to initiate a change in cell activity. Advanced glycation end-products (AGEs) form from a series of chemical reactions after an initial glycation event (a non-enzymatic reaction between reducing sugars and free amino groups of proteins).","definition_xrefs":["Wikipedia:RAGE_(receptor)","PMID:7592757","PMID:9224812","GOC:signaling","PMID:12453678","PMID:12707408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"advanced glycation end-product receptor activity","synonyms":[{"name":"AGE receptor activity","type":"exact"},{"name":"RAGE activity","type":"exact"}],"termid":"GO:0050785"}


id: PBO:0055780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LON peptidase N-terminal domain and ring finger 2","termid":"PBO:0055780"}


id: GO:0031765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 galanin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galanin receptor binding","termid":"GO:0031763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 2 galanin receptor binding","synonyms":[{"name":"type 2 galanin receptor ligand","type":"narrow"}],"termid":"GO:0031765"}


id: FYPO:0004194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hydroxyurea is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein accumulation during cellular response to hydroxyurea","type":"related"},{"name":"decreased protein level during cellular response to HU","type":"exact"},{"name":"decreased protein level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004194"}


id: PBO:0075090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 140","termid":"PBO:0075090"}


id: PBO:0088697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP III complex subunit Trs85a","termid":"PBO:0088697"}


id: GO:0035042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replacement of sperm-specific chromosomal proteins with somatic histones, to allow the paternal genome to acquire a nucleosomal chromatin organization compatible with nuclear activity.","definition_xrefs":["GOC:bf","PMID:11735001"],"gene_count":0,"genotype_count":0,"name":"obsolete fertilization, exchange of chromosomal proteins (obsolete GO:0035042)","synonyms":[{"name":"sperm-specific histone exchange","type":"exact"},{"name":"sperm-specific histone replacement","type":"exact"}],"termid":"GO:0035042"}


id: PBO:0086045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in prospore membrane assembly; involved in the assembly of the prospore membrane during sporulation; interacts with Spo14p","termid":"PBO:0086045"}


id: GO:0043517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA damage response, signal transduction by p53 class mediator","termid":"GO:0043516"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction by p53 class mediator","termid":"GO:1901798"},{"relation_name":"positively_regulates","term_name":"DNA damage response, signal transduction by p53 class mediator","termid":"GO:0030330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of DNA damage response, signal transduction by p53 class mediator","synonyms":[{"name":"activation of DNA damage response, signal transduction by p53 class mediator","type":"narrow"},{"name":"positive regulation of p53 induced by DNA damage response","type":"exact"},{"name":"stimulation of DNA damage response, signal transduction by p53 class mediator","type":"narrow"},{"name":"up regulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"}],"termid":"GO:0043517"}


id: PBO:0017419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-adjacent_to","termid":"PBO:0017419"}


id: PBO:0069310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 566, pseudogene","termid":"PBO:0069310"}


id: PBO:0074032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 19","termid":"PBO:0074032"}


id: PBO:0001240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bos1 (predicted)","termid":"PBO:0001240"}


id: PBO:0083793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein of the mitochondrial intermembrane space; forms a complex with Tim10p (TIM10 complex) that delivers hydrophobic proteins to the TIM22 complex for insertion into the inner membrane","termid":"PBO:0083793"}


id: PBO:0086613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein co-localizes with clathrin-coated vesicles; YHL017W has a paralog, PTM1, that arose from the whole genome duplication","termid":"PBO:0086613"}


id: PBO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member C","termid":"PBO:0047243"}


id: PBO:0058806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7848","termid":"PBO:0058806"}


id: PBO:0051675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 5","termid":"PBO:0051675"}


id: GO:1904137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in notochord morphogenesis.","definition_xrefs":["GOC:dph","GO_REF:0000058","GOC:TermGenie","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of convergent extension involved in gastrulation","termid":"GO:1904104"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in notochord morphogenesis","termid":"GO:1904136"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in notochord morphogenesis","synonyms":[{"name":"down regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"down-regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"downregulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"inhibition of convergent extension involved in notochord morphogenesis","type":"narrow"}],"termid":"GO:1904137"}


id: PBO:0043910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine receptor like factor 3","termid":"PBO:0043910"}


id: PBO:0080709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 10A","termid":"PBO:0080709"}


id: FYPO:0007837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at subtelomeric regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:31837996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in heterochromatin","termid":"FYPO:0000855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased nucleosome occupancy at subtelomere","synonyms":[{"name":"decreased nucleosome occupancy at subtelomere during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at subtelomere during vegetative growth","type":"exact"},{"name":"reduced nucleosome occupancy at subtelomere","type":"exact"}],"termid":"FYPO:0007837"}


id: FYPO:0001954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of calcium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal calcium import","termid":"FYPO:0001953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased calcium import","synonyms":[{"name":"decreased calcium import during mitotic cell cycle","type":"related"},{"name":"decreased calcium import during vegetative growth","type":"exact"},{"name":"decreased calcium import into cell","type":"exact"},{"name":"decreased calcium ion import","type":"exact"},{"name":"decreased calcium ion import across plasma membrane","type":"exact"},{"name":"decreased calcium uptake","type":"exact"},{"name":"decreased calcium uptake into intracellular compartments","type":"related"},{"name":"decreased cellular calcium import","type":"exact"},{"name":"reduced calcium import","type":"exact"}],"termid":"FYPO:0001954"}


id: PBO:0031786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_sister_chromatid_separation","termid":"PBO:0031786"}


id: PBO:0027460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_rotenone","termid":"PBO:0027460"}


id: PBO:0013229
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressivity","termid":"PBO:0013229"}


id: GO:0032085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a type II restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of type II site-specific deoxyribonuclease activity","synonyms":[{"name":"regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type II restriction endodeoxyribonuclease regulator","type":"related"},{"name":"type II restriction enzyme regulator","type":"related"}],"termid":"GO:0032085"}


id: FYPO:0001074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of myo-inositol into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal myo-inositol import","termid":"FYPO:0001073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased myo-inositol import","synonyms":[{"name":"decreased myo-inositol import across plasma membrane","type":"exact"},{"name":"decreased myo-inositol import during mitotic cell cycle","type":"related"},{"name":"decreased myo-inositol import during vegetative growth","type":"exact"},{"name":"decreased myo-inositol import into cell","type":"exact"},{"name":"decreased myo-inositol uptake","type":"exact"},{"name":"reduced myo-inositol import","type":"exact"}],"termid":"FYPO:0001074"}


id: RO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of 'expressed in'","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expresses","termid":"RO:0002292"}


id: PBO:0057354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548a-2","termid":"PBO:0057354"}


id: FYPO:0002085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the growth of a cell is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle. Cell growth is the process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GO:0016049","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cell growth","termid":"FYPO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal vegetative cell growth","termid":"FYPO:0002085"}


id: PATO:0002366
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Male quality of having complete, unaltered reproductive organs.","definition_xrefs":["PATOC:MF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male","termid":"PATO:0000384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intact male","termid":"PATO:0002366"}


id: PBO:0026863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abolished_mitotic_sister_chromatid_separation,_with_mononucleate_and_anucleate_compartment_formation","termid":"PBO:0026863"}


id: GO:0090547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of low humidity stimulus, reduced moisture in the atmosphere.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to humidity","termid":"GO:0009270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low humidity","termid":"GO:0090547"}


id: PBO:0089359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity implicated in DNA repair","termid":"PBO:0089359"}


id: GO:0102902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isopimaradienal + NADPH + O2 = isopimaric acid + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"isopimaradienal hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-8538"],"termid":"GO:0102902"}


id: PBO:0061553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IIIB","termid":"PBO:0061553"}


id: PBO:0089268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf6","termid":"PBO:0089268"}


id: PBO:0085296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-regulated protein; predicted to have 4 transmembrane segments and a coiled coil domain; regulated by Ste12p; required for efficient nuclear fusion","termid":"PBO:0085296"}


id: PBO:0066525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 1","termid":"PBO:0066525"}


id: PBO:0091667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing conserved fungal protein Wwm3","termid":"PBO:0091667"}


id: FYPO:0003967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is lover than normal when the population in which the cell is found is in stationary phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level in stationary phase","synonyms":[{"name":"decreased protein accumulation in stationary phase","type":"related"},{"name":"reduced protein level in stationary phase","type":"exact"}],"termid":"FYPO:0003967"}


id: PBO:0051536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 4 receptor","termid":"PBO:0051536"}


id: GO:0070841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inclusion body.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"inclusion body assembly","termid":"GO:0070841"}


id: FYPO:0001645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"decreased protein-protein interaction","secondary_identifiers":["FYPO:0004636"],"synonyms":[{"name":"decreased protein binding","type":"exact"},{"name":"reduced protein-protein interaction","type":"exact"}],"termid":"FYPO:0001645"}


id: GO:0071118
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to the extracellular matrix protein NOV.","definition_xrefs":["PMID:12902636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-NOV complex","synonyms":[{"name":"ITGAV-ITGB3-FN-1-NOV complex","type":"narrow"}],"termid":"GO:0071118"}


id: PBO:0062734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 1 (gene/pseudogene)","termid":"PBO:0062734"}


id: GO:0016528
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasm of a muscle cell; includes the sarcoplasmic reticulum.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"sarcoplasm","secondary_identifiers":["Wikipedia:Sarcoplasm"],"termid":"GO:0016528"}


id: PBO:0090952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin-interacting protein, BFC/FNIP-Folliculin complex subunit subunit Fnp1","termid":"PBO:0090952"}


id: PBO:0108704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP, GTPase activating protein for Arf6, Ucp3","termid":"PBO:0108704"}


id: GO:1900570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diorcinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"diorcinol metabolic process","synonyms":[{"name":"diorcinol metabolism","type":"exact"}],"termid":"GO:1900570"}


id: PBO:0110480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 7","termid":"PBO:0110480"}


id: GO:0060576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell of the intestine over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell development","termid":"GO:0002066"},{"relation_name":"part_of","term_name":"intestinal epithelial cell differentiation","termid":"GO:0060575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell development","termid":"GO:0060576"}


id: PATO:0002137
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A readiopacity quality inhering in a bearer by virtue of the bearer's prevention of the passage of electromagnetic radiation.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiopacity","termid":"PATO:0002136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiopaque","termid":"PATO:0002137"}


id: PBO:0068026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 331","termid":"PBO:0068026"}


id: GO:1905048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:26473732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metallopeptidase activity","synonyms":[{"name":"regulation of metalloprotease activity","type":"narrow"},{"name":"regulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905048"}


id: PR:Q7Z9I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C188.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.09c","synonyms":[{"name":"Spom972h-pfl4","type":"exact"}],"termid":"PR:Q7Z9I1"}


id: PBO:0003834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific cyclin Rem1","termid":"PBO:0003834"}


id: GO:0009250
data:
  {"annotated_genes":["SJAG_04771","SJAG_01376","SJAG_04483","SJAG_00876","SJAG_04184","SJAG_01835","SJAG_03123","SJAG_03705","SJAG_04509","SJAG_01290","SJAG_00424","SJAG_00963","SJAG_02916","SJAG_00218","SJAG_02222","SJAG_05285","SJAG_01209","SJAG_04462","SJAG_01453","SJAG_04073","SJAG_02590","SJAG_04236","SJAG_03057","SJAG_04666","SJAG_02278","SJAG_00610","SJAG_01288","SJAG_01028","SJAG_01787","SJAG_04668","SJAG_02446","SJAG_03587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90261,86625,98557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[110547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030979"},{"annotations":[90508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[87618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051274"},{"annotations":[110548,105216,113982,100294,85179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[105443,102224,109329,87619,103914,84103,111995,87608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98747,104751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[105040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[86959,77630],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[88441],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[83556,88445],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[83930],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[88447,98956,114097,88430,101468,86802],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[98958,85471,90985,88451],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01028":null,"SJAG_01209":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glucan anabolism","type":"exact"},{"name":"glucan biosynthesis","type":"exact"},{"name":"glucan formation","type":"exact"},{"name":"glucan synthesis","type":"exact"}],"termid":"GO:0009250","terms_by_termid":{"GO:0005978":null,"GO:0006078":null,"GO:0030979":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0051274":null,"GO:0060635":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:1905736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-proline import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24344203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proline import across plasma membrane","termid":"GO:1902835"},{"relation_name":"is_a","term_name":"regulation of L-proline import across plasma membrane","termid":"GO:1905735"},{"relation_name":"negatively_regulates","term_name":"L-proline import across plasma membrane","termid":"GO:1904271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-proline import across plasma membrane","termid":"GO:1905736"}


id: PBO:0109827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTT co-chaperone complex LRR repeat subunit Tel2","termid":"PBO:0109827"}


id: PBO:0049010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1","termid":"PBO:0049010"}


id: GO:0045953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated cytotoxicity","termid":"GO:0001911"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immunity","termid":"GO:0002716"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"negatively_regulates","term_name":"natural killer cell mediated cytotoxicity","termid":"GO:0042267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell mediated cytotoxicity","synonyms":[{"name":"down regulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"down-regulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"downregulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"inhibition of natural killer cell mediated cytotoxicity","type":"narrow"},{"name":"negative regulation of NK cell mediated cell death","type":"exact"},{"name":"negative regulation of NK cell mediated cell killing","type":"exact"},{"name":"negative regulation of NK cell mediated cytolysis","type":"related"},{"name":"negative regulation of NK cell mediated cytotoxicity","type":"exact"},{"name":"negative regulation of natural killer cell mediated cell death","type":"exact"},{"name":"negative regulation of natural killer cell mediated cell killing","type":"exact"},{"name":"negative regulation of natural killer cell mediated cytolysis","type":"related"}],"termid":"GO:0045953"}


id: PBO:0062152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 2 pseudogene","termid":"PBO:0062152"}


id: PBO:0029665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_topoisomerase_type_I_activity","termid":"PBO:0029665"}


id: GO:0042843
data:
  {"annotated_genes":["SJAG_02010","SJAG_03958","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91069,91811,97273],"is_not":false,"summary":null,"term":"GO:0042843"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-xylose, a naturally occurring plant polysaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose catabolic process","termid":"GO:0019323"},{"relation_name":"is_a","term_name":"D-xylose metabolic process","termid":"GO:0042732"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"D-xylose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-xylose breakdown","type":"exact"},{"name":"D-xylose catabolism","type":"exact"},{"name":"D-xylose degradation","type":"exact"}],"termid":"GO:0042843","terms_by_termid":{"GO:0042843":null}}


id: PBO:0005009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 3","termid":"PBO:0005009"}


id: GO:0042067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of polarized ommatidia. Ommatidia occur in two chiral forms. The trapezoidal arrangement of photoreceptors in the dorsal part of the eye is the mirror image of that in the ventral part.","definition_xrefs":["GOC:ascb_2009","GOC:tb","PMID:3937883","GOC:dph","PMID:3076112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of ommatidial planar polarity","synonyms":[{"name":"establishment of ommatidial polarity","type":"exact"}],"termid":"GO:0042067"}


id: FYPO:0001458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"},{"relation_name":"is_a","term_name":"decreased histone H3 acetylation during vegetative growth","termid":"FYPO:0002362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K14 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K14 acetylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K14 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone lysine H3 K14 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001458"}


id: GO:0052837
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103514],"is_not":false,"summary":null,"term":"GO:0052837"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a thiazole, a five-membered heterocyclic ring structure containing a sulfur in the 1-position and a nitrogen in the 3-position.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole or thiazole biosynthetic process","termid":"GO:0018131"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"thiazole metabolic process","termid":"GO:0052838"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"thiazole biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiazole anabolism","type":"exact"},{"name":"thiazole biosynthesis","type":"exact"},{"name":"thiazole formation","type":"exact"},{"name":"thiazole synthesis","type":"exact"}],"termid":"GO:0052837","terms_by_termid":{"GO:0052837":null}}


id: SO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A segment of non-homology between a and alpha mating alleles, found at all three mating loci (HML, MAT, and HMR), has two forms (Ya and Yalpha).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_region","synonyms":[{"name":"Y-region","type":"exact"}],"termid":"SO:0002001"}


id: PBO:0062835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 1","termid":"PBO:0062835"}


id: GO:0052637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:3-3-16:0-phosphatidylglycerol = 1-18:3-3-trans-16:1-phosphatidylglycerol + 2 H+. This reaction is the formation of a trans double bond between carbon 3 and carbon 4 (counting from the carboxyl end) of palmitic acid, which is specifically esterified to the sn-2 glyceryl carbon of phosphatidylglycerol.","definition_xrefs":["PMID:19682287","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity (obsolete GO:0052637)","termid":"GO:0052637"}


id: FYPO:0004082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during mitosis","synonyms":[{"name":"normal protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during mitotic M phase","type":"related"},{"name":"normal protein phosphorylation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004082"}


