# terms

id: PBO:0004852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg6 (predicted)","termid":"PBO:0004852"}


id: PBO:0084166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved subunit of mitochondrial pyruvate carrier (MPC); MPC is a mitochondrial inner membrane complex that mediates pyruvate uptake and comprises Mpc1p and Mpc2p during fermentative growth, or Mcp1p and Mpc3p during respiratory growth; null mutant displays slow growth that is complemented by expression of human or mouse ortholog; mutation in human ortholog MPC1 is associated with lactic acidosis and hyperpyruvatemia","termid":"PBO:0084166"}


id: GO:1903639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gastrin-induced gastric acid secretion.","definition_xrefs":["PMID:11123201","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastric acid secretion","termid":"GO:0060453"},{"relation_name":"regulates","term_name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of gastrin-induced gastric acid secretion","termid":"GO:1903639"}


id: PBO:0002681
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDC14","termid":"PBO:0002681"}


id: PBO:0086601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is increased in ssu72-ts69 mutant","termid":"PBO:0086601"}


id: FYPO:0006993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere outer repeat regions is decreased at the right outer repeat region (otr1R) of the centromere.","definition_xrefs":["PomBase:mah","PMID:26518661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin silencing at centromere outer repeat","termid":"FYPO:0003412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere otr1R","synonyms":[{"name":"decreased centromere outer repeat region chromatin silencing at otr1R","type":"exact"},{"name":"decreased chromatin silencing at centromere otr1R during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere otr1R during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at centromere otr1R region","type":"exact"},{"name":"decreased chromatin silencing at centromeric otr1R","type":"exact"},{"name":"decreased chromatin silencing at pericentric region otr1R","type":"related"},{"name":"decreased chromatin silencing at pericentromeric region otr1R","type":"related"},{"name":"decreased heterochromatic silencing at centromere otr1R","type":"exact"},{"name":"decreased heterochromatin silencing at centromere otr1R","type":"exact"},{"name":"reduced chromatin silencing at centromere otr1R","type":"exact"}],"termid":"FYPO:0006993"}


id: GO:0034003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + vetispiradiene.","definition_xrefs":["RHEA:10340","EC:4.2.3.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"vetispiradiene synthase activity","secondary_identifiers":["MetaCyc:RXN-4823","KEGG_REACTION:R06523"],"synonyms":[{"name":"HVS","type":"related"},{"name":"pemnaspirodiene synthase activity","type":"related"},{"name":"trans,trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, vetispiradiene-forming) activity","type":"related"},{"name":"vetispiradiene cyclase activity","type":"related"},{"name":"vetispiradiene-forming farnesyl pyrophosphate cyclase activity","type":"related"}],"termid":"GO:0034003"}


id: PBO:0053626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 670","termid":"PBO:0053626"}


id: PBO:0064627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peter pan homolog","termid":"PBO:0064627"}


id: PATO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's behavior aggregate of the responses or reactions or movements in a given situation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioral quality","secondary_identifiers":["PATO:0001722"],"synonyms":[{"name":"behavioural quality","type":"exact"}],"termid":"PATO:0000186"}


id: GO:1901554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paracetamol stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to paracetamol","synonyms":[{"name":"response to acetaminophen","type":"exact"}],"termid":"GO:1901554"}


id: GO:0070675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hypoxanthine + H2O + O2 = xanthine + H2O2.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hypoxanthine oxidase activity","secondary_identifiers":["Reactome:R-HSA-74247"],"synonyms":[{"name":"Schardinger enzyme activity","type":"related"},{"name":"hypoxanthine-xanthine oxidase activity","type":"broad"},{"name":"hypoxanthine:O2 oxidoreductase activity","type":"related"},{"name":"hypoxanthine:oxygen oxidoreductase activity","type":"related"},{"name":"schardinger enzyme","type":"related"},{"name":"xanthine oxidoreductase activity","type":"broad"}],"termid":"GO:0070675"}


id: PBO:0047608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four and a half LIM domains 3","termid":"PBO:0047608"}


id: GO:0045282
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multimeric complex which consists of flavoprotein (subunit A ; InterPro:IPR003952), iron-sulfur protein (subunit B) and membrane-bound cytochrome b560 (subunit C; InterPro:IPR000701). In some Archaea, the membrane-bound subunits (C or C and D) do not necessarily contain heme. Membrane-bound subunits can bind/react with quinones. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mtg_sensu","GOC:kd","InterPro:IPR000701"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane succinate dehydrogenase complex (obsolete GO:0045282)","synonyms":[{"name":"succinate dehydrogenase complex","type":"broad"}],"termid":"GO:0045282"}


id: PBO:0004558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase family (predicted)","termid":"PBO:0004558"}


id: PBO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta subunit Gnr1","termid":"PBO:0005272"}


id: PR:Q9USV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mep33 gene.","definition_xrefs":["UniProtKB:Q9USV4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export protein 33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.02","synonyms":[{"name":"Spom972h-mep33","type":"exact"}],"termid":"PR:Q9USV4"}


id: PBO:0012006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1102, mitochondrial ribosomal protein Rsm2202, fusion protein (predicted)","termid":"PBO:0012006"}


id: PBO:0043308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 1 pseudogene 1","termid":"PBO:0043308"}


id: PBO:0075108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 157","termid":"PBO:0075108"}


id: PBO:0001399
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.16.1.18","termid":"PBO:0001399"}


id: GO:0075002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a germination tube of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont infection structure to host","termid":"GO:0075001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont germination tube to host","synonyms":[{"name":"adhesion of symbiont germination tube to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075002"}


id: PBO:0088089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose pyrophosphorylase (UGPase); catalyses the reversible formation of UDP-Glc from glucose 1-phosphate and UTP, involved in a wide variety of metabolic pathways, expression modulated by Pho85p through Pho4p; involved in PKA-mediated oxidative stress resistance and long-term survival in stationary phase; UGP1 has a paralog, YHL012W, that arose from the whole genome duplication","termid":"PBO:0088089"}


id: GO:0050224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-prunasin + H2O = D-glucose + mandelonitrile.","definition_xrefs":["RHEA:16489","EC:3.2.1.118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"prunasin beta-glucosidase activity","secondary_identifiers":["MetaCyc:PRUNASIN-BETA-GLUCOSIDASE-RXN","KEGG_REACTION:R02558"],"synonyms":[{"name":"prunasin b-glucosidase activity","type":"exact"},{"name":"prunasin beta-D-glucohydrolase activity","type":"related"},{"name":"prunasin hydrolase activity","type":"related"}],"termid":"GO:0050224"}


id: GO:0060092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycinergic synaptic transmission. Glycinergic synaptic transmission is the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine.","definition_xrefs":["GOC:dms","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, glycinergic","termid":"GO:0060012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic transmission, glycinergic","termid":"GO:0060092"}


id: GO:0044192
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the host cell mitochondrial envelope. It is highly folded to form cristae.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell mitochondrial membrane","termid":"GO:0044191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial inner membrane","termid":"GO:0044192"}


id: PBO:0083321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF PRM6/YML047C","termid":"PBO:0083321"}


id: FYPO:0006551
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115415,115413],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115414,115416],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115400],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004205"},{"annotations":[115401],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115486,115487,115488],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which gene expression is abnormal. One or more parts of gene expression, such as transcription or translation, may be affected, and all genes, or a specific subset of genes, may be affected.","definition_xrefs":["GO:0010467","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression phenotype","termid":"FYPO:0000142"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_03689":null},"genotype_count":6,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03118","SJAG_03689"],"name":"abnormal gene expression","references_by_uniquename":{"PMID:23786411":null,"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_01956","SJAG_03689","SJAG_03351"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","dcr1delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0006551","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001327":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004982":null,"FYPO_EXT:0000001":null}}


id: GO:0071730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the beak. This process pertains to the initial formation of a structure from unspecified parts. The avian beak is an external anatomical structure, in the head region, that is adapted for feeding self and young, catching prey, probing, etc. It encompasses, but is not restricted to, the maxilla, mandible, maxillary rhamphotheca, mandibular rhamphotheca, nostril, nasal fossa, nasal bones, egg tooth and rictus.","definition_xrefs":["GOC:lp","ISBN:0702008729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"beak morphogenesis","termid":"GO:0071729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beak formation","termid":"GO:0071730"}


id: GO:1901625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ergosterol stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to sterol","termid":"GO:0036315"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ergosterol","termid":"GO:1901625"}


id: PATO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Area"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D extent","termid":"PATO:0001709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"area","termid":"PATO:0001323"}


id: PBO:0079319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 9B","termid":"PBO:0079319"}


id: GO:1903635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of leucine-tRNA ligase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:2280766"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of leucine-tRNA ligase activity (obsolete GO:1903635)","synonyms":[{"name":"activation of L-leucine:tRNALeu ligase (AMP-forming)","type":"narrow"},{"name":"activation of leucine translase activity","type":"narrow"},{"name":"activation of leucine-tRNA ligase activity","type":"narrow"},{"name":"activation of leucine-tRNA synthetase activity","type":"narrow"},{"name":"activation of leucyl-tRNA synthetase activity","type":"narrow"},{"name":"activation of leucyl-transfer RNA synthetase activity","type":"narrow"},{"name":"activation of leucyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of leucyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"positive regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of leucine translase activity","type":"exact"},{"name":"positive regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"positive regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"up regulation of leucine translase activity","type":"exact"},{"name":"up regulation of leucine-tRNA ligase activity","type":"exact"},{"name":"up regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"up regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"up regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"up regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up-regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of leucine translase activity","type":"exact"},{"name":"up-regulation of leucine-tRNA ligase activity","type":"exact"},{"name":"up-regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"up-regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"upregulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"upregulation of leucine translase activity","type":"exact"},{"name":"upregulation of leucine-tRNA ligase activity","type":"exact"},{"name":"upregulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"upregulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"upregulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"upregulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1903635"}


id: PBO:0074237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 49 member 4","termid":"PBO:0074237"}


id: PR:000024857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteolytic cleavage product that is derived from P-factor precursor. In Schizosaccharomyces pombe 972h- the sequence is SYADFLRAYHSWNTFVNPDRPNL, corresponding to amino acids 100-122 of UniProtKB:Q09180-1.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"map2/Clv:P-factor-like2","pombase_gene_id":"SPCC1795.06","synonyms":[{"name":"PomBase_original_PRO_term_name: P-factor-like 2","type":"exact"},{"name":"map2/Clv:P-factor-like2","type":"exact"}],"termid":"PR:000024857"}


id: FYPO:0007396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of heme into the cell occurs to a lower extent than normal.","definition_xrefs":["GO:0140420","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased heme import","synonyms":[{"name":"decreased haem import","type":"exact"},{"name":"decreased heme import during mitotic cell cycle","type":"related"},{"name":"decreased heme import during vegetative growth","type":"exact"},{"name":"decreased heme import into cell","type":"exact"},{"name":"reduced heme import","type":"exact"}],"termid":"FYPO:0007396"}


id: GO:0019342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trypanothione (N1,N6,-bis(glutathionyl)spermidine) in two steps from glutathione and spermidine via an N1- or N8-glutathionylspermidine intermediate. Trypanothione appears to be an essential redox intermediate in intracellular thiol redox regulation. It also plays a role in protecting against oxidative stress.","definition_xrefs":["PMID:9677355","MetaCyc:TRYPANOSYN-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trypanothione metabolic process","termid":"GO:0046206"},{"relation_name":"is_a","term_name":"glutathione derivative biosynthetic process","termid":"GO:1901687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"trypanothione biosynthetic process","synonyms":[{"name":"trypanothione anabolism","type":"exact"},{"name":"trypanothione biosynthesis","type":"exact"},{"name":"trypanothione formation","type":"exact"},{"name":"trypanothione synthesis","type":"exact"}],"termid":"GO:0019342"}


id: GO:0004241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-mitochondrial processing peptidase (obsolete GO:0004241)","synonyms":[{"name":"alpha-MPP","type":"exact"},{"name":"alpha-mitochondrial processing peptidase","type":"exact"}],"termid":"GO:0004241"}


id: GO:0042690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of crystal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of crystal cell differentiation","termid":"GO:0042689"},{"relation_name":"is_a","term_name":"negative regulation of hemocyte differentiation","termid":"GO:0045611"},{"relation_name":"negatively_regulates","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of crystal cell differentiation","synonyms":[{"name":"down regulation of crystal cell differentiation","type":"exact"},{"name":"down-regulation of crystal cell differentiation","type":"exact"},{"name":"downregulation of crystal cell differentiation","type":"exact"},{"name":"inhibition of crystal cell differentiation","type":"narrow"}],"termid":"GO:0042690"}


id: PBO:0082238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-isopropylmalate synthase II (2-isopropylmalate synthase); catalyzes the first step in the leucine biosynthesis pathway; the minor isozyme, responsible for the residual alpha-IPMS activity detected in a leu4 null mutant; LEU9 has a paralog, LEU4, that arose from the whole genome duplication","termid":"PBO:0082238"}


id: PBO:0089779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker Mto1","termid":"PBO:0089779"}


id: GO:0033256
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing an inhibitory-kappaB (I-kappaB/IKB) protein and one or more copies of an NF-kappaB protein. In the resting state, NF-kappaB dimers are bound to I-kappaB proteins, sequestering NF-kappaB in the cytoplasm.","definition_xrefs":["GOC:mah","PMID:9407099","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"I-kappaB/NF-kappaB complex","termid":"GO:0033256"}


id: PBO:0057749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1908","termid":"PBO:0057749"}


id: PBO:0038482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 7","termid":"PBO:0038482"}


id: PBO:0057086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 182","termid":"PBO:0057086"}


id: PBO:0003420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex complex subunit Swc2","termid":"PBO:0003420"}


id: GO:1905849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of forward locomotion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11717360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of locomotion","termid":"GO:0040013"},{"relation_name":"is_a","term_name":"regulation of forward locomotion","termid":"GO:0043059"},{"relation_name":"negatively_regulates","term_name":"forward locomotion","termid":"GO:0043056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of forward locomotion","synonyms":[{"name":"down regulation of forward locomotion","type":"exact"},{"name":"down-regulation of forward locomotion","type":"exact"},{"name":"downregulation of forward locomotion","type":"exact"},{"name":"inhibition of forward locomotion","type":"narrow"}],"termid":"GO:1905849"}


id: GO:0060932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the His-Purkinje system. These cells form the fibers regulate cardiac muscle contraction in the ventricles.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"},{"relation_name":"part_of","term_name":"His-Purkinje system development","termid":"GO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"His-Purkinje system cell differentiation","termid":"GO:0060932"}


id: PBO:0088358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease, XP-G family protein Ast1","termid":"PBO:0088358"}


id: GO:0044494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant activation or increase in the activity of the activity of a voltage-gated sodium channel in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:21781281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of voltage-gated sodium channel activity in another organism","termid":"GO:0044492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of voltage-gated sodium channel activity in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044494"}


id: PBO:0078019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 9","termid":"PBO:0078019"}


id: PBO:0089458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorelay sensor kinase Mak2","termid":"PBO:0089458"}


id: FYPO:0001381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal protein kinase activity","termid":"FYPO:0001381"}


id: GO:0048473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-methionine is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:mlg","PMID:12169620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"methionine transport","termid":"GO:0015821"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"D-methionine transmembrane transport","termid":"GO:0048473"}


id: GO:0010476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of gibberellin stimulus.","definition_xrefs":["PMID:17521411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to gibberellin stimulus","termid":"GO:0071370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"gibberellin mediated signaling pathway","synonyms":[{"name":"gibberellin-mediated signalling","type":"exact"}],"termid":"GO:0010476"}


id: PBO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in ergosterol biosynthesis; conditional mutants produce less ergosterol, display impaired oxygen consumption, respiratory growth, mitochondrial iron utilization, and are more sensitive to oxidative stress; mutant bm-8 has a growth defect on iron-limited medium that is complemented by overexpression of Yfh1p; protein localizes to the cytoplasm, ER and nuclear envelope; highly conserved in ascomycetes","termid":"PBO:0086041"}


id: GO:1904231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of succinate dehydrogenase activity.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","PMID:18160053","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of succinate dehydrogenase activity","termid":"GO:1904229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of succinate dehydrogenase activity","synonyms":[{"name":"activation of fumarate dehydrogenase activity","type":"narrow"},{"name":"activation of fumarate reductase activity","type":"narrow"},{"name":"activation of fumaric hydrogenase activity","type":"narrow"},{"name":"activation of succinate dehydrogenase activity","type":"narrow"},{"name":"activation of succinate oxidoreductase activity","type":"narrow"},{"name":"activation of succinate:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"activation of succinate:acceptor oxidoreductase activity","type":"narrow"},{"name":"activation of succinic acid dehydrogenase activity","type":"narrow"},{"name":"activation of succinodehydrogenase activity","type":"narrow"},{"name":"activation of succinyl dehydrogenase activity","type":"narrow"},{"name":"positive regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"positive regulation of fumarate reductase activity","type":"exact"},{"name":"positive regulation of fumaric hydrogenase activity","type":"exact"},{"name":"positive regulation of succinate oxidoreductase activity","type":"exact"},{"name":"positive regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"positive regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"positive regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"positive regulation of succinodehydrogenase activity","type":"exact"},{"name":"positive regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"up regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"up regulation of fumarate reductase activity","type":"exact"},{"name":"up regulation of fumaric hydrogenase activity","type":"exact"},{"name":"up regulation of succinate dehydrogenase activity","type":"exact"},{"name":"up regulation of succinate oxidoreductase activity","type":"exact"},{"name":"up regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"up regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"up regulation of succinodehydrogenase activity","type":"exact"},{"name":"up regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"up-regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"up-regulation of fumarate reductase activity","type":"exact"},{"name":"up-regulation of fumaric hydrogenase activity","type":"exact"},{"name":"up-regulation of succinate dehydrogenase activity","type":"exact"},{"name":"up-regulation of succinate oxidoreductase activity","type":"exact"},{"name":"up-regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up-regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"up-regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"up-regulation of succinodehydrogenase activity","type":"exact"},{"name":"up-regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"upregulation of fumarate dehydrogenase activity","type":"exact"},{"name":"upregulation of fumarate reductase activity","type":"exact"},{"name":"upregulation of fumaric hydrogenase activity","type":"exact"},{"name":"upregulation of succinate dehydrogenase activity","type":"exact"},{"name":"upregulation of succinate oxidoreductase activity","type":"exact"},{"name":"upregulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"upregulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"upregulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"upregulation of succinodehydrogenase activity","type":"exact"},{"name":"upregulation of succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:1904231"}


id: PBO:0003353
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.2.22","termid":"PBO:0003353"}


id: PBO:0060791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S2","termid":"PBO:0060791"}


id: GO:0017159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + cysteamine.","definition_xrefs":["EC:3.5.1.92","RHEA:13445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"pantetheine hydrolase activity","secondary_identifiers":["MetaCyc:3.5.1.92-RXN","Reactome:R-HSA-8938300","KEGG_REACTION:R02973"],"synonyms":[{"name":"(R)-pantetheine amidohydrolase activity","type":"related"},{"name":"pantetheinase activity","type":"related"},{"name":"vanin","type":"related"},{"name":"vanin-1","type":"related"}],"termid":"GO:0017159"}


id: GO:0098881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The exocytic fusion of neurotransmitter receptor-containing vesicles with plasma membrane, resulting in the integration of neurotransmitter receptors into the plasma membrane. This process includes tethering and docking steps that prepare vesicles for fusion.","definition_xrefs":["GOC:aruk","PMID:19503082","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"is_a","term_name":"vesicle tethering involved in exocytosis","termid":"GO:0090522"},{"relation_name":"part_of","term_name":"neurotransmitter receptor transport to plasma membrane","termid":"GO:0098877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0140056","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"exocytic insertion of neurotransmitter receptor to plasma membrane","synonyms":[{"name":"neurotransmitter receptor insertion","type":"exact"}],"termid":"GO:0098881"}


id: GO:0090026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of monocyte chemotaxis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of monocyte chemotaxis","termid":"GO:0090025"},{"relation_name":"positively_regulates","term_name":"monocyte chemotaxis","termid":"GO:0002548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte chemotaxis","termid":"GO:0090026"}


id: GO:0051003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ligation of two substances via a nitrogen-metal bond, forming a coordination complex.","definition_xrefs":["EC:6.6.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds","termid":"GO:0051002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}


id: PBO:0052489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 3","termid":"PBO:0052489"}


id: PBO:0050354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 57","termid":"PBO:0050354"}


id: GO:0044478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant activation, maintenance or an increase in the frequency, rate or extent of platelet aggregation in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of platelet aggregation in another organism","termid":"GO:0044365"},{"relation_name":"is_a","term_name":"envenomation resulting in positive regulation of blood coagulation in another organism","termid":"GO:0044469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of platelet aggregation in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of platelet aggregation in other organism","type":"exact"}],"termid":"GO:0044478"}


id: GO:0102171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,6E)-nerolidol + O2 + reduced [NADPH--hemoprotein reductase] = (3E)-4,8-dimethylnona-1,3,7-triene + but-3-en-2-one + H+ + 2 H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:55424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"DMNT synthase activity","secondary_identifiers":["MetaCyc:RXN-11911","EC:1.14.14.59"],"termid":"GO:0102171"}


id: PBO:0034168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_between-species_paralogy_relationship_with","termid":"PBO:0034168"}


id: GO:0035905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ascending aorta over time, from its initial formation to the mature structure. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["MA:0002570","Wikipedia:Ascending_aorta","GOC:bf","GOC:dgh","UBERON:0001496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascending aorta development","termid":"GO:0035905"}


id: PBO:0070909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 17","termid":"PBO:0070909"}


id: GO:0071647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of macrophage inflammatory protein-1 gamma.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of macrophage inflammatory protein-1 gamma production","termid":"GO:0071646"},{"relation_name":"negatively_regulates","term_name":"macrophage inflammatory protein-1 gamma production","termid":"GO:0071607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage inflammatory protein-1 gamma production","synonyms":[{"name":"negative regulation of CCL9 production","type":"exact"},{"name":"negative regulation of MIP-1g production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 9 production","type":"exact"}],"termid":"GO:0071647"}


id: MOD:00421
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen atom on a carbon with a carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"C-glycosylated residue","synonyms":[{"name":"CGlycoRes","type":"exact"}],"termid":"MOD:00421"}


id: PBO:0109361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 1","termid":"PBO:0109361"}


id: PBO:0067405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 515, pseudogene","termid":"PBO:0067405"}


id: GO:0071488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low light intensity stimulus. A very low light intensity stimulus is defined as a level of electromagnetic radiation below 0.001 mmol/m2/sec.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to very low light intensity stimulus","termid":"GO:0055122"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to very low light intensity stimulus","termid":"GO:0071488"}


id: GO:0050067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + O2 = 5-aminopentanamide + CO2 + H2O.","definition_xrefs":["RHEA:14601","EC:1.13.12.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"lysine 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00449","MetaCyc:LYSINE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"L-lysine-2-monooxygenase activity","type":"related"},{"name":"L-lysine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"lysine monooxygenase activity","type":"related"},{"name":"lysine oxygenase activity","type":"related"}],"termid":"GO:0050067"}


id: PR:O60140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18H10.09 gene.","definition_xrefs":["UniProtKB:O60140","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18H10.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.09","synonyms":[{"name":"Spom972h-SPBC18H10.09","type":"exact"}],"termid":"PR:O60140"}


id: PBO:0057569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 764","termid":"PBO:0057569"}


id: PR:Q9UTF6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 5A, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01180","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.04","secondary_identifiers":["UniProtKB:Q9UTF6"],"synonyms":[{"name":"Spom972h-COX5A","type":"exact"},{"name":"cytochrome c oxidase polypeptide VI (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTF6"}


id: PBO:0029824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_vegetative_cell_population_(obsolete_FYPO:0002413)","termid":"PBO:0029824"}


id: PBO:0069439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 704, pseudogene","termid":"PBO:0069439"}


id: PBO:0043577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 1 chain","termid":"PBO:0043577"}


id: GO:0048314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryo sac are generated and organized. The embryo sac develops from the megaspore in heterosporous plants.","definition_xrefs":["PMID:25332875","PMID:12271029","GOC:jid","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac morphogenesis","synonyms":[{"name":"female gametophyte morphogenesis","type":"exact"}],"termid":"GO:0048314"}


id: GO:1990197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ATP-binding cassette (ABC) transporter complex that is capable of methionine-importing activity. An example is the bacterial MetNIQ methionine transporter, that consists of the dimeric ATPase subunit MetN located at the cytoplasmic side of the plasma membrane and the dimeric transmembrane subunit MetI. MetQ is regarded as the periplasmic methionine-binding chaperon subunit, and is capable of transporting methionine from the periplasm into the cytoplasm in an ATP-dependent manner.","definition_xrefs":["GOC:bhm","PMID:22095702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"},{"relation_name":"is_a","term_name":"methionine-importing complex","termid":"GO:1902509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"methionine-importing ABC transporter complex","synonyms":[{"name":"ATP-binding cassette (ABC) methionine importer complex","type":"exact"},{"name":"ATP-dependent methionine importer complex","type":"exact"},{"name":"ATP-dependent methionine importing complex","type":"exact"},{"name":"ATP-dependent methionine-importing complex","type":"exact"},{"name":"MetNI complex","type":"narrow"},{"name":"MetNI transport complex","type":"narrow"},{"name":"MetNI transporter","type":"related"},{"name":"MetNI transporter complex","type":"narrow"},{"name":"MetNIQ complex","type":"narrow"},{"name":"MetNIQ transport complex","type":"narrow"},{"name":"MetNIQ transporter","type":"related"},{"name":"MetNIQ transporter complex","type":"related"},{"name":"methionine transport complex","type":"broad"},{"name":"methionine transporter","type":"related"},{"name":"methionine transporter complex","type":"broad"},{"name":"methionine transporter complex, ATP-dependent","type":"broad"}],"termid":"GO:1990197"}


id: PBO:0083724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 107kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane prior to SNARE-mediated fusion; involved in assembly of the exocyst complex; required with Sec3p for ER inheritance where it promotes anchoring of the cortical ER at the bud tip","termid":"PBO:0083724"}


id: PBO:0061950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 2","termid":"PBO:0061950"}


id: GO:1905577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GP1c.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","PMID:1454804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"ganglioside GP1c binding","termid":"GO:1905577"}


id: PBO:0028677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0028677"}


id: GO:1902575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization to cell division site that is involved in cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["PMID:24127216","GOC:al","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"part_of","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0051179","GO:0007049","GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell division site involved in cytokinesis, actomyosin contractile ring assembly","synonyms":[{"name":"protein localisation to cell division site involved in constriction ring assembly","type":"narrow"},{"name":"protein localisation to cell division site involved in contractile ring assembly","type":"exact"},{"name":"protein localisation to cell division site involved in cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"protein localisation to cell division site involved in cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"protein localisation to cell division site involved in cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"protein localisation to cell division site involved in cytokinesis, actomyosin ring formation","type":"related"},{"name":"protein localisation to cell division site involved in cytokinesis, contractile ring assembly","type":"related"},{"name":"protein localization to cell division site involved in constriction ring assembly","type":"narrow"},{"name":"protein localization to cell division site involved in contractile ring assembly","type":"exact"},{"name":"protein localization to cell division site involved in cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"protein localization to cell division site involved in cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"protein localization to cell division site involved in cytokinesis, actomyosin ring formation","type":"related"},{"name":"protein localization to cell division site involved in cytokinesis, contractile ring assembly","type":"related"}],"termid":"GO:1902575"}


id: PBO:0079503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 1","termid":"PBO:0079503"}


id: PBO:0002818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Sck2","termid":"PBO:0002818"}


id: GO:0046281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cinnamic acid, 3-phenyl-2-propenoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cinnamic acid metabolic process","termid":"GO:0009803"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748","GO:0044248"],"is_obsolete":false,"name":"cinnamic acid catabolic process","synonyms":[{"name":"cinnamic acid breakdown","type":"exact"},{"name":"cinnamic acid catabolism","type":"exact"},{"name":"cinnamic acid degradation","type":"exact"},{"name":"cinnamylic acid catabolic process","type":"exact"},{"name":"cinnamylic acid catabolism","type":"exact"},{"name":"phenylacrylic acid catabolic process","type":"exact"},{"name":"phenylacrylic acid catabolism","type":"exact"}],"termid":"GO:0046281"}


id: PBO:0072347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 33","termid":"PBO:0072347"}


id: PBO:0114436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily J member 1","termid":"PBO:0114436"}


id: PBO:0003831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc membrane transporter Zrg17","termid":"PBO:0003831"}


id: PR:O74907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BRCA2 and CDKN1A-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04180","PRO:DNx","PANTHER:PTHR13261:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bcp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.08","secondary_identifiers":["UniProtKB:O74907"],"synonyms":[{"name":"Spom972h-BCCIP","type":"exact"}],"termid":"PR:O74907"}


id: GO:1900972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sarcinapterin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of sarcinapterin metabolic process","termid":"GO:1900969"},{"relation_name":"is_a","term_name":"regulation of sarcinapterin biosynthetic process","termid":"GO:1900971"},{"relation_name":"negatively_regulates","term_name":"sarcinapterin biosynthetic process","termid":"GO:1900868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0008150","GO:0042559","GO:0044281"],"is_obsolete":false,"name":"negative regulation of sarcinapterin biosynthetic process","synonyms":[{"name":"down regulation of sarcinapterin anabolism","type":"exact"},{"name":"down regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"down regulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"down regulation of sarcinapterin formation","type":"exact"},{"name":"down regulation of sarcinapterin synthesis","type":"exact"},{"name":"down-regulation of sarcinapterin anabolism","type":"exact"},{"name":"down-regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"down-regulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"down-regulation of sarcinapterin formation","type":"exact"},{"name":"down-regulation of sarcinapterin synthesis","type":"exact"},{"name":"downregulation of sarcinapterin anabolism","type":"exact"},{"name":"downregulation of sarcinapterin biosynthesis","type":"exact"},{"name":"downregulation of sarcinapterin biosynthetic process","type":"exact"},{"name":"downregulation of sarcinapterin formation","type":"exact"},{"name":"downregulation of sarcinapterin synthesis","type":"exact"},{"name":"inhibition of sarcinapterin anabolism","type":"exact"},{"name":"inhibition of sarcinapterin biosynthesis","type":"exact"},{"name":"inhibition of sarcinapterin biosynthetic process","type":"narrow"},{"name":"inhibition of sarcinapterin formation","type":"exact"},{"name":"inhibition of sarcinapterin synthesis","type":"exact"},{"name":"negative regulation of sarcinapterin anabolism","type":"exact"},{"name":"negative regulation of sarcinapterin biosynthesis","type":"exact"},{"name":"negative regulation of sarcinapterin formation","type":"exact"},{"name":"negative regulation of sarcinapterin synthesis","type":"exact"}],"termid":"GO:1900972"}


id: PBO:0053340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 208","termid":"PBO:0053340"}


id: PBO:0062831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odd-skipped related transcription factor 1","termid":"PBO:0062831"}


id: PBO:0061230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing, octamer-binding pseudogene 2","termid":"PBO:0061230"}


id: PR:O74765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.03","secondary_identifiers":["UniProtKB:O74765"],"synonyms":[{"name":"ProRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PARS2","type":"exact"},{"name":"prolyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74765"}


id: FYPO:0007352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region on chromosome 1.","definition_xrefs":["PMID:31811152","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 1","synonyms":[{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"},{"name":"normal homologous chromosome pairing at omt3 locus","type":"narrow"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"}],"termid":"FYPO:0007352"}


id: PBO:0064680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 16","termid":"PBO:0064680"}


id: GO:0071266
data:
  {"annotated_genes":["SJAG_03102","SJAG_00395","SJAG_02972","SJAG_03671","SJAG_02290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64676,106651,107239],"is_not":false,"summary":null,"term":"GO:0071266"},{"annotations":[96762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[110104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[106653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019283"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid, from simpler components.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine biosynthetic process","termid":"GO:0071265"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_02290":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"'de novo' L-methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"'de novo' L-methionine anabolism","type":"exact"},{"name":"'de novo' L-methionine biosynthesis","type":"exact"},{"name":"'de novo' L-methionine formation","type":"exact"},{"name":"'de novo' L-methionine synthesis","type":"exact"}],"termid":"GO:0071266","terms_by_termid":{"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019283":null,"GO:0071266":null}}


id: GO:0097180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains a serine protease inhibitor and a protease; formation of the complex inhibits serine protease activity.","definition_xrefs":["GOC:ans","PMID:6323392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protease inhibitor complex","termid":"GO:0097179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"serine protease inhibitor complex","synonyms":[{"name":"serine-type endopeptidase inhibitor complex","type":"exact"},{"name":"serpin complex","type":"exact"}],"termid":"GO:0097180"}


id: FYPO:0005154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at the mat2P silent mating-type cassette is decreased.","definition_xrefs":["PMID:18354497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin at silent mating-type cassette","termid":"FYPO:0003573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin at mat2P silent mating-type cassette","synonyms":[{"name":"decreased protein localisation to heterochromatin at mat2P silent mating-type cassette","type":"exact"},{"name":"decreased protein localization to heterochromatin at mat2P mating-type region heterochromatin","type":"exact"},{"name":"decreased protein localization to heterochromatin at mat2P silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin at mat2P silent mating-type region","type":"exact"},{"name":"decreased protein localization to mat2P silent mating type cassette heterochromatin","type":"exact"},{"name":"decreased protein localization to mat2P silent mating-type cassette heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to mat2P silent mating-type cassette heterochromatin during vegetative growth","type":"exact"},{"name":"reduced protein localization to heterochromatin at mat2P silent mating-type cassette","type":"exact"}],"termid":"FYPO:0005154"}


id: GO:0060405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of penile erection. Penile erection is the hardening, enlarging and rising of the penis which often occurs in the sexually aroused male and enables sexual intercourse. Achieved by increased inflow of blood into the vessels of erectile tissue, and decreased outflow.","definition_xrefs":["GOC:dph","GOC:tb","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"penile erection","termid":"GO:0043084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of penile erection","termid":"GO:0060405"}


id: GO:0015924
data:
  {"annotated_genes":["SJAG_03032","SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66033,91770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal alpha-D-mannose residues in oligo-mannose oligosaccharides.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"mannosyl-oligosaccharide mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0015924","terms_by_termid":{"GO:0004571":null}}


id: SO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Dictyostelium intermediate repeat sequence (DIRS) retrotransposons are members of the YR_retrotransposon (SO:0002286) superfamily with the following protein domains: RT, RH, YR, and MT. RT is a reverse transcriptase. RH is RNAse H. YR is tyrosine recombinase. MT is DNA N-6-adenine-methyltransferase.","definition_xrefs":["PMID:24086727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRS_YR_retrotransposon","synonyms":[{"name":"DIRS YR retrotransposon","type":"exact"},{"name":"DIRS retrotransposon","type":"exact"},{"name":"RYD retrotransposon","type":"exact"}],"termid":"SO:0002287"}


id: PBO:0060244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC binding protein","termid":"PBO:0060244"}


id: FYPO:0000171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which late endosome to vacuole transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"},{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal late endosome to vacuole transport","synonyms":[{"name":"abnormal late endosome to vacuole protein transport","type":"narrow"},{"name":"abnormal late endosome to vacuole transport during mitotic cell cycle","type":"related"},{"name":"abnormal late endosome to vacuole transport during vegetative growth","type":"exact"}],"termid":"FYPO:0000171"}


id: GO:0044726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The global programming of epigenetic modifications in the female pronucleus of the newly fertilized zygote. The maternal genome is protected from global DNA demethylation before the first division of the zygote, and instead undergoes passive, replication-dependent demethylation during early embryogenesis, arising from inhibition of the DNA maintenance methyltransferase Dnmt1.","definition_xrefs":["GOC:sp","PMID:22868271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetic programming in the zygotic pronuclei","termid":"GO:0044725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"epigenetic programing of female pronucleus","synonyms":[{"name":"maintenance of DNA methylation at imprinted genes","type":"related"},{"name":"protection of DNA demethylation of female pronucleus","type":"narrow"},{"name":"protection of DNA methylation in female pronucleus","type":"narrow"}],"termid":"GO:0044726"}


id: PBO:0040134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 18","termid":"PBO:0040134"}


id: PBO:0060620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK adaptor protein 1","termid":"PBO:0060620"}


id: GO:0043847
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimer composed of the chi and psi subunits which is a subassembly of the DNA polymerase III clamp loader complex and serves as a bridge between the DnaX complex and the single-stranded DNA-binding protein (SSB).","definition_xrefs":["PMID:12940977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"DNA polymerase III, clamp loader complex","termid":"GO:0043846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase III, clamp loader chi/psi subcomplex","synonyms":[{"name":"DNA polymerase III, DnaX complex, chi/psi subcomplex","type":"exact"}],"termid":"GO:0043847"}


id: PBO:0068836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 74, pseudogene","termid":"PBO:0068836"}


id: PBO:0050905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein 44","termid":"PBO:0050905"}


id: FYPO:0004853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of an RNA in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"RNA localization phenotype","synonyms":[{"name":"RNA localisation phenotype","type":"exact"},{"name":"fission yeast RNA localization phenotype","type":"exact"}],"termid":"FYPO:0004853"}


id: PATO:0000493
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000493 amplitude value (obsolete PATO:0000493)","termid":"PATO:0000493"}


id: GO:0031265
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed upon binding of Fas/CD95/APO-1 to its ligand. The complex includes FADD/Mort1, procaspase-8/10 and c-FLIP in addition to the ligand-bound receptor.","definition_xrefs":["PMID:12655293","PMID:12628743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex","termid":"GO:0031264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"CD95 death-inducing signaling complex","synonyms":[{"name":"CD95 DISC","type":"exact"},{"name":"CD95 death-inducing signalling complex","type":"exact"},{"name":"Fas death-inducing signaling complex","type":"exact"}],"termid":"GO:0031265"}


id: FYPO:0003487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to ionizing radiation. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to ionizing radiation (obsolete FYPO:0003487)","synonyms":[{"name":"cut during cellular response to IR","type":"exact"},{"name":"cut during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003487"}


id: GO:0044410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Penetration by a symbiont into a host organism via naturally occurring openings in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete entry into host through natural portals (obsolete GO:0044410)","synonyms":[{"name":"entry into other organism through natural portals during symbiotic interaction","type":"related"},{"name":"entry into other organism through natural portals involved in symbiotic interaction","type":"related"}],"termid":"GO:0044410"}


id: GO:0140376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving a signal and transmitting it in a cell to initiate an innate immune response.","definition_xrefs":["PMID:31415752","PMID:28921463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"innate immune receptor activity","termid":"GO:0140376"}


id: MOD:01892
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-crotonyl-L-lysine.","definition_xrefs":["RESID:AA0567","PubMed:21925322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-crotonyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(2E)-but-2-enamido]hexanoic acid","type":"exact"},{"name":"(2S)-2-amino-6-[(2E)-but-2-enoylamino]hexanoic acid","type":"exact"},{"name":"(2S)-2-azanyl-6-[(2E)-but-2-enoylazanyl]hexanoic acid","type":"exact"},{"name":"MOD_RES N6-crotonyl-L-lysine","type":"exact"},{"name":"N(epsilon)-crotonyllysine","type":"exact"},{"name":"N6-(E)-crotonyllysine","type":"exact"},{"name":"N6-[(2E)-2-butenoyl]-L-lysine","type":"exact"},{"name":"N6-crotonyl-L-lysine","type":"exact"},{"name":"N6-crotonyllysine","type":"exact"},{"name":"N6-trans-crotonyllysine","type":"exact"}],"termid":"MOD:01892"}


id: GO:1901363
data:
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id: FYPO:0004360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of mitotic cell cycle arrest or delay due to regulation by the DNA replication checkpoint is shorter than normal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0000173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"decreased duration of mitotic cell cycle DNA replication checkpoint","synonyms":[{"name":"decreased duration of DNA replication checkpoint","type":"broad"},{"name":"decreased duration of mitotic cell cycle DNA replication checkpoint activation","type":"exact"},{"name":"reduced duration of mitotic cell cycle DNA replication checkpoint","type":"exact"}],"termid":"FYPO:0004360"}


id: PBO:0005282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 associated (4 and 2 associated) protein 4","termid":"PBO:0005282"}


id: GO:0030391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructosamine biosynthetic process","synonyms":[{"name":"fructosamine anabolism","type":"exact"},{"name":"fructosamine biosynthesis","type":"exact"},{"name":"fructosamine formation","type":"exact"},{"name":"fructosamine synthesis","type":"exact"}],"termid":"GO:0030391"}


id: PBO:0057779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2681","termid":"PBO:0057779"}


id: PR:P87157
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A target of Myb protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor-binding protein C25H2.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.16c","secondary_identifiers":["UniProtKB:P87157"],"synonyms":[{"name":"Spom972h-TOM1","type":"exact"}],"termid":"PR:P87157"}


id: GO:0000299
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes.","definition_xrefs":["PMID:10512869"],"gene_count":0,"genotype_count":0,"name":"obsolete integral to membrane of membrane fraction (obsolete GO:0000299)","synonyms":[{"name":"integral to membrane of membrane fraction","type":"exact"}],"termid":"GO:0000299"}


id: PBO:0081289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 72B, pseudogene","termid":"PBO:0081289"}


id: GO:1905489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory neuron axon guidance.","definition_xrefs":["GOC:TermGenie","PMID:16516839","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory neuron axon guidance","termid":"GO:1905489"}


id: PBO:0003116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domains","termid":"PBO:0003116"}


id: GO:0021971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after exiting the basilar pons through the medullary pyramid in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","GOC:dgh","PMID:9878731","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the medullary pyramid","synonyms":[{"name":"corticospinal neuron axon pathfinding through the medullary pyramid","type":"exact"}],"termid":"GO:0021971"}


id: PBO:0046727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enah/Vasp-like","termid":"PBO:0046727"}


id: GO:0044547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA topoisomerase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"DNA topoisomerase binding","secondary_identifiers":["GO:0017033"],"synonyms":[{"name":"DNA topoisomerase I binding","type":"narrow"}],"termid":"GO:0044547"}


id: GO:0045785
data:
  {"annotated_genes":["SJAG_00910","SJAG_03802","SJAG_04191","SJAG_01253","SJAG_02380","SJAG_03484"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104771],"is_not":false,"summary":null,"term":"GO:0045785"},{"annotations":[102018,107526,110251,104772,112323,104895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell adhesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00910":null,"SJAG_01253":null,"SJAG_02380":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell adhesion","type":"narrow"},{"name":"stimulation of cell adhesion","type":"narrow"},{"name":"up regulation of cell adhesion","type":"exact"},{"name":"up-regulation of cell adhesion","type":"exact"},{"name":"upregulation of cell adhesion","type":"exact"}],"termid":"GO:0045785","terms_by_termid":{"GO:0045785":null,"GO:1900735":null}}


id: PBO:0047405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 43","termid":"PBO:0047405"}


id: PBO:0028429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pyridoxine_import","termid":"PBO:0028429"}


id: GO:0090064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of microtubule nucleation","termid":"GO:0090063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"activation of microtubule nucleation","termid":"GO:0090064"}


id: GO:0006025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactosaminoglycans, any of a group of polysaccharides that contain amino sugars derived from the galactose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"galactosaminoglycan metabolic process","termid":"GO:0046350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"galactosaminoglycan biosynthetic process","synonyms":[{"name":"galactosaminoglycan anabolism","type":"exact"},{"name":"galactosaminoglycan biosynthesis","type":"exact"},{"name":"galactosaminoglycan formation","type":"exact"},{"name":"galactosaminoglycan synthesis","type":"exact"}],"termid":"GO:0006025"}


id: SO:0000226
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding seryl tRNA (SO:000269).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine_tRNA_primary_transcript","synonyms":[{"name":"serine tRNA primary transcript","type":"exact"}],"termid":"SO:0000226"}


id: MOD:02026
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteinyl-L-glycine dipeptide and an L-cysteine residue by a disulfide bond to form S-(cysteinyl-glycyl)-L-cysteine.","definition_xrefs":["PubMed:27936627","PubMed:29627744","PubMed:20594348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"},{"relation_name":"part_of","term_name":"L-cysteine glutathione disulfide","termid":"MOD:00234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(cysteinyl-glycyl)-L-cysteine","termid":"MOD:02026"}


id: GO:0071402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoprotein particle stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}


id: GO:0030854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of granulocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of granulocyte differentiation","termid":"GO:0030852"},{"relation_name":"positively_regulates","term_name":"granulocyte differentiation","termid":"GO:0030851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of granulocyte differentiation","synonyms":[{"name":"activation of granulocyte differentiation","type":"narrow"},{"name":"stimulation of granulocyte differentiation","type":"narrow"},{"name":"up regulation of granulocyte differentiation","type":"exact"},{"name":"up-regulation of granulocyte differentiation","type":"exact"},{"name":"upregulation of granulocyte differentiation","type":"exact"}],"termid":"GO:0030854"}


id: PBO:0056294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1A","termid":"PBO:0056294"}


id: PBO:0081242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 10","termid":"PBO:0081242"}


id: PBO:0045877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 1","termid":"PBO:0045877"}


id: PBO:0070557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 23","termid":"PBO:0070557"}


id: PBO:0026674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0026674"}


id: GO:0080023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a (3R)-3-hydroxyacyl-CoA = a (2E)-enoyl-CoA + H2O.","definition_xrefs":["RHEA:26526","PMID:16982622"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxyacyl-CoA dehydratase activity (obsolete GO:0080023)","synonyms":[{"name":"3R-hydroxyacyl-CoA dehydratase activity","type":"exact"}],"termid":"GO:0080023"}


id: GO:0046919
data:
  {"annotated_genes":["SJAG_01426"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96713],"is_not":false,"summary":null,"term":"GO:0046919"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a pyruvyl (oxopropanoyl) group from one compound to another.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01426":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"pyruvyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046919","terms_by_termid":{"GO:0046919":null}}


id: PBO:0054057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1399","termid":"PBO:0054057"}


id: PBO:0068031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 336","termid":"PBO:0068031"}


id: PBO:0027074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell_with_binucleate_and_anucleate_compartments","termid":"PBO:0027074"}


id: GO:0019388
data:
  {"annotated_genes":["SJAG_01209"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105037],"is_not":false,"summary":null,"term":"GO:0019388"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactose, the aldohexose galacto-hexose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose metabolic process","termid":"GO:0006012"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galactose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactose breakdown","type":"exact"},{"name":"galactose catabolism","type":"exact"},{"name":"galactose degradation","type":"exact"}],"termid":"GO:0019388","terms_by_termid":{"GO:0019388":null}}


id: PBO:0038594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase long chain","termid":"PBO:0038594"}


id: PBO:0052962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 2","termid":"PBO:0052962"}


id: PBO:0084904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial type 2C protein phosphatase (PP2C); has similarity to mammalian PP1Ks; involved in mitophagy; null mutant is sensitive to rapamycin and has decreased phosphorylation of the Pda1 subunit of pyruvate dehydrogenase","termid":"PBO:0084904"}


id: GO:0102775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + isovaleryl-CoA + 3 malonyl-CoA = 6-(4-methyl-2-oxopentyl)-4-hydroxy-2-pyrone + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"6-(4-methyl-2-oxopentyl)-4-hydroxy-2-pyrone synthase activity","secondary_identifiers":["MetaCyc:RXN-7826"],"termid":"GO:0102775"}


id: GO:1902259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rl","PMID:11299204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"}


id: PBO:0082536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; has similarity to Tir1p, Tir2p, Tir3p, and Tir4p; expressed under anaerobic conditions, completely repressed during aerobic growth","termid":"PBO:0082536"}


id: GO:0001760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-3-carboxymuconate 6-semialdehyde + H+ = 2-aminomuconate 6-semialdehyde + CO2.","definition_xrefs":["EC:4.1.1.45","RHEA:16557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"aminocarboxymuconate-semialdehyde decarboxylase activity","secondary_identifiers":["MetaCyc:AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN","KEGG_REACTION:R04323"],"synonyms":[{"name":"2-amino-3-(3-oxoprop-1-en-1-yl)but-2-enedioate carboxy-lyase (2-aminomuconate-semialdehyde-forming)","type":"related"},{"name":"2-amino-3-(3-oxoprop-1-en-1-yl)but-2-enedioate carboxy-lyase activity","type":"related"},{"name":"2-amino-3-(3-oxoprop-2-enyl)but-2-enedioate carboxy-lyase activity","type":"related"},{"name":"ACMSD activity","type":"exact"},{"name":"alpha-amino-beta-carboxymuconate-epsilon-semialdehade decarboxylase activity","type":"related"},{"name":"alpha-amino-beta-carboxymuconate-epsilon-semialdehyde beta-decarboxylase activity","type":"related"},{"name":"picolinic acid carboxylase activity","type":"related"},{"name":"picolinic acid decarboxylase activity","type":"related"}],"termid":"GO:0001760"}


id: PBO:0039321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase, 12S type","termid":"PBO:0039321"}


id: PR:Q9P7J4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mft1 gene.","definition_xrefs":["UniProtKB:Q9P7J4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit mft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.11c","synonyms":[{"name":"Spom972h-mft1","type":"exact"}],"termid":"PR:Q9P7J4"}


id: MOD:00635
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:325","PubMed:10611275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"10-fluoroethoxyphosphinyl-N-(biotinamidopentyl)decanamide","synonyms":[{"name":"10-ethoxyphosphinyl-N-(biotinamidopentyl)decanamide","type":"related"},{"name":"FP-Biotin","type":"related"}],"termid":"MOD:00635"}


id: PBO:0081465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 335","termid":"PBO:0081465"}


id: PBO:0109277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3112","termid":"PBO:0109277"}


id: GO:1901153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving paromomycin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"paromomycin metabolic process","synonyms":[{"name":"paromomycin metabolism","type":"exact"}],"termid":"GO:1901153"}


id: GO:0052812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate + ADP + 2 H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-3,4-bisphosphate 5-kinase activity (obsolete GO:0052812)","synonyms":[{"name":"phosphatidylinositol-3,4-bisphosphate 5-kinase activity","type":"exact"}],"termid":"GO:0052812"}


id: PBO:0045237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 5","termid":"PBO:0045237"}


id: PBO:0070303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 9","termid":"PBO:0070303"}


id: FYPO:0004298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide 5'-phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal polynucleotide 5'-phosphatase activity","termid":"FYPO:0004298"}


id: SO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recombinationally rearranged gene of the vertebrate immune system.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombinationally_rearranged_gene","termid":"SO:0000456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombinationally_rearranged_vertebrate_immune_system_gene","synonyms":[{"name":"recombinationally rearranged vertebrate immune system gene","type":"exact"}],"termid":"SO:0000941"}


id: GO:0052337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a host organism destabilizes a symbiont membrane. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by host of symbiont membrane (obsolete GO:0052337)","synonyms":[{"name":"modification by host of symbiont cell membrane","type":"narrow"},{"name":"modification by host of symbiont membrane","type":"related"}],"termid":"GO:0052337"}


id: PR:Q1MTR1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC11C11.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTR1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-dependent helicase irc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.11c","synonyms":[{"name":"Spom972h-SPBC11C11.11c","type":"exact"}],"termid":"PR:Q1MTR1"}


id: PBO:0064977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 33","termid":"PBO:0064977"}


id: PBO:0042529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5","termid":"PBO:0042529"}


id: PBO:0041483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 96","termid":"PBO:0041483"}


id: GO:0031721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a hemoglobin alpha chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobin binding","termid":"GO:0030492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hemoglobin alpha binding","termid":"GO:0031721"}


id: GO:0018808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate + H2O = pyruvate + 1-hydroxy-2-naphthaldehyde.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate hydratase-aldolase activity (obsolete GO:0018808)","termid":"GO:0018808"}


id: PBO:0069876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1163, pseudogene","termid":"PBO:0069876"}


id: PBO:0029509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spore_population_(obsolete_FYPO:0002206)","termid":"PBO:0029509"}


id: PBO:0085339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide binding protein; required for vesicle formation in autophagy and the cytoplasm-to-vacuole targeting (CVT) pathway; binds PtdIns(3,5)P2, PI3P and PI4P; WD-40 repeat containing protein and PROPPIN family member; relocalizes from the vacuole to cytoplasm upon DNA replication stress; mammalian homologs include: WIPI1, WIPI2, WIPI3 and WIPI4/WDR45; mutations in human WDR45 cause static encephalopathy of childhood with neurodegeneration in adulthood (SENDA)","termid":"PBO:0085339"}


id: PBO:0002656
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome","termid":"PBO:0002656"}


id: PBO:0028565
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_intragenic_meiotic_recombination","termid":"PBO:0028565"}


id: GO:0045706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salivary gland determination.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of salivary gland boundary specification","termid":"GO:0045704"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of salivary gland boundary specification","synonyms":[{"name":"activation of salivary gland determination","type":"narrow"},{"name":"positive regulation of salivary gland determination","type":"exact"},{"name":"stimulation of salivary gland determination","type":"narrow"},{"name":"up regulation of salivary gland determination","type":"exact"},{"name":"up-regulation of salivary gland determination","type":"exact"},{"name":"upregulation of salivary gland determination","type":"exact"}],"termid":"GO:0045706"}


id: PBO:0075478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily A member 6","termid":"PBO:0075478"}


id: PBO:0043009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer hallmarks in lung lncRNA 1","termid":"PBO:0043009"}


id: PATO:0000685
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000685 relative incidence value (obsolete PATO:0000685)","termid":"PATO:0000685"}


id: GO:0021994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural folds are fused extending from the initial closure points.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"progression of neural tube closure","termid":"GO:0021994"}


id: GO:1902623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil migration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:1826836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of neutrophil migration","termid":"GO:1902622"},{"relation_name":"negatively_regulates","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil migration","synonyms":[{"name":"down regulation of neutrophil migration","type":"exact"},{"name":"down-regulation of neutrophil migration","type":"exact"},{"name":"downregulation of neutrophil migration","type":"exact"},{"name":"inhibition of neutrophil migration","type":"narrow"}],"termid":"GO:1902623"}


id: PBO:0056474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine adenosyltransferase 2 non-catalytic beta subunit","termid":"PBO:0056474"}


id: GO:0050103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + 1,6-alpha-D-glucosyl(m) = 1,4-alpha-D-glucosyl(n-1) + 1,6-alpha-D-glucosyl(m+1).","definition_xrefs":["MetaCyc:DEXTRIN-DEXTRANASE-RXN","EC:2.4.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"dextrin dextranase activity","secondary_identifiers":["RHEA:14625"],"synonyms":[{"name":"1,4-alpha-D-glucan:1,6-alpha-D-glucan 6-alpha-D-glucosyltransferase activity","type":"related"},{"name":"dextran dextrinase activity","type":"related"},{"name":"dextrin 6-glucosyltransferase activity","type":"related"}],"termid":"GO:0050103"}


id: PBO:0036419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7a involved in ribosome biogenesis","termid":"PBO:0036419"}


id: GO:1901731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:TermGenie","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of homotypic cell-cell adhesion","termid":"GO:0034112"},{"relation_name":"is_a","term_name":"regulation of platelet aggregation","termid":"GO:0090330"},{"relation_name":"positively_regulates","term_name":"platelet aggregation","termid":"GO:0070527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of platelet aggregation","synonyms":[{"name":"activation of blood platelet aggregation","type":"narrow"},{"name":"activation of platelet aggregation","type":"narrow"},{"name":"activation of thrombocyte aggregation","type":"related"},{"name":"positive regulation of blood platelet aggregation","type":"exact"},{"name":"positive regulation of thrombocyte aggregation","type":"related"},{"name":"up regulation of blood platelet aggregation","type":"exact"},{"name":"up regulation of platelet aggregation","type":"exact"},{"name":"up regulation of thrombocyte aggregation","type":"related"},{"name":"up-regulation of blood platelet aggregation","type":"exact"},{"name":"up-regulation of platelet aggregation","type":"exact"},{"name":"up-regulation of thrombocyte aggregation","type":"related"},{"name":"upregulation of blood platelet aggregation","type":"exact"},{"name":"upregulation of platelet aggregation","type":"exact"},{"name":"upregulation of thrombocyte aggregation","type":"related"}],"termid":"GO:1901731"}


id: FYPO:0001694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hesperadin. Cells stop growing (and may die) at a concentration of hesperadin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to hesperadin","synonyms":[{"name":"hypersensitive to hesperadin","type":"exact"},{"name":"sensitive to hesperadin during mitotic cell cycle","type":"related"},{"name":"sensitive to hesperadin during vegetative growth","type":"exact"}],"termid":"FYPO:0001694"}


id: PBO:0061084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKX2-2 antisense RNA 1","termid":"PBO:0061084"}


id: GO:0004507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a steroid + reduced adrenal ferredoxin + O2 = an 11-beta-hydroxysteroid + oxidized adrenal ferredoxin + H2O.","definition_xrefs":["EC:1.14.15.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"steroid 11-beta-monooxygenase activity","secondary_identifiers":["Reactome:R-HSA-5580292","Reactome:R-HSA-193997","MetaCyc:STEROID-11-BETA-MONOOXYGENASE-RXN","Reactome:R-HSA-194017","RHEA:15629","Reactome:R-HSA-5600598"],"synonyms":[{"name":"cytochrome P450 CYP11B1","type":"narrow"},{"name":"cytochrome P450 CYP11B2","type":"narrow"},{"name":"cytochrome p450 XIB1 activity","type":"narrow"},{"name":"oxygenase, steroid 11beta -mono-","type":"related"},{"name":"steroid 11-beta-hydroxylase activity","type":"exact"},{"name":"steroid 11-beta/18-hydroxylase activity","type":"related"},{"name":"steroid 11beta-hydroxylase activity","type":"related"},{"name":"steroid 11beta-monooxygenase activity","type":"related"},{"name":"steroid 11beta/18-hydroxylase activity","type":"related"},{"name":"steroid,reduced-adrenal-ferredoxin:oxygen oxidoreductase (11beta-hydroxylating)","type":"related"}],"termid":"GO:0004507"}


id: PBO:0076621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBCC domain containing 1","termid":"PBO:0076621"}


id: GO:1901712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of homoserine biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of homoserine biosynthetic process","termid":"GO:1901710"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"homoserine biosynthetic process","termid":"GO:0009090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of homoserine biosynthetic process","synonyms":[{"name":"activation of homoserine anabolism","type":"exact"},{"name":"activation of homoserine biosynthesis","type":"exact"},{"name":"activation of homoserine biosynthetic process","type":"narrow"},{"name":"activation of homoserine formation","type":"exact"},{"name":"activation of homoserine synthesis","type":"exact"},{"name":"positive regulation of homoserine anabolism","type":"exact"},{"name":"positive regulation of homoserine biosynthesis","type":"exact"},{"name":"positive regulation of homoserine formation","type":"exact"},{"name":"positive regulation of homoserine synthesis","type":"exact"},{"name":"up regulation of homoserine anabolism","type":"exact"},{"name":"up regulation of homoserine biosynthesis","type":"exact"},{"name":"up regulation of homoserine biosynthetic process","type":"exact"},{"name":"up regulation of homoserine formation","type":"exact"},{"name":"up regulation of homoserine synthesis","type":"exact"},{"name":"up-regulation of homoserine anabolism","type":"exact"},{"name":"up-regulation of homoserine biosynthesis","type":"exact"},{"name":"up-regulation of homoserine biosynthetic process","type":"exact"},{"name":"up-regulation of homoserine formation","type":"exact"},{"name":"up-regulation of homoserine synthesis","type":"exact"},{"name":"upregulation of homoserine anabolism","type":"exact"},{"name":"upregulation of homoserine biosynthesis","type":"exact"},{"name":"upregulation of homoserine biosynthetic process","type":"exact"},{"name":"upregulation of homoserine formation","type":"exact"},{"name":"upregulation of homoserine synthesis","type":"exact"}],"termid":"GO:1901712"}


id: PBO:0052075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1","termid":"PBO:0052075"}


id: GO:0072289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a metanephric nephron tubule from unspecified parts. A metanephric nephron tubule is an epithelial tube that is part of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule formation","termid":"GO:0072079"},{"relation_name":"is_a","term_name":"metanephric tubule formation","termid":"GO:0072174"},{"relation_name":"part_of","term_name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule formation","termid":"GO:0072289"}


id: PATO:0001143
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001143 ig e concentration value (obsolete PATO:0001143)","termid":"PATO:0001143"}


id: GO:0035582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Confining a bone morphogenetic protein (BMP) to the extracellular matrix (ECM), such that it is separated from other components of the signaling pathway, including its cell surface receptor. Bone morphogenetic proteins (BMPs) are secreted as homodimers, non-covalently associated with N-terminal pro-peptides, and are targeted to the extracellular matrix through interaction with matrix proteins.","definition_xrefs":["PMID:20855508","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of BMP signaling pathway","termid":"GO:0030514"},{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"},{"relation_name":"is_a","term_name":"maintenance of protein location in extracellular region","termid":"GO:0071694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"sequestering of BMP in extracellular matrix","synonyms":[{"name":"BMP sequestration in the ECM","type":"exact"},{"name":"negative regulation of BMP signaling pathway by extracellular sequestering of BMP","type":"exact"},{"name":"negative regulation of BMP signalling pathway by extracellular matrix sequestering of BMP","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signaling pathway by extracellular matrix sequestering of bone morphogenetic protein","type":"exact"}],"termid":"GO:0035582"}


id: PBO:0028758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_punctate_nuclear_protein_localization_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028758"}


id: GO:0008848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete enterobactin synthetase (obsolete GO:0008848)","synonyms":[{"name":"enterobactin synthetase","type":"exact"},{"name":"enterochelin synthetase activity","type":"exact"},{"name":"nonribosomal peptide synthetase","type":"related"}],"termid":"GO:0008848"}


id: GO:0048452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the petal. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ structural organization","termid":"GO:0048450"},{"relation_name":"part_of","term_name":"petal morphogenesis","termid":"GO:0048446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal structural organization","secondary_identifiers":["GO:0048420"],"synonyms":[{"name":"petal structural organisation","type":"exact"}],"termid":"GO:0048452"}


id: PR:000027897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pap1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:1899230","PMID:15165244","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1-like transcription factor","synonyms":[{"name":"CAF3","type":"related"},{"name":"Caffeine resistance protein 3","type":"exact"},{"name":"pap1","type":"exact"}],"termid":"PR:000027897"}


id: PBO:0066408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing","termid":"PBO:0066408"}


id: GO:0014035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neural crest cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate determination","termid":"GO:0048867"},{"relation_name":"part_of","term_name":"neural crest cell fate commitment","termid":"GO:0014034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell fate determination","termid":"GO:0014035"}


id: GO:0051799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of hair follicle development.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of hair follicle development","termid":"GO:0051797"},{"relation_name":"negatively_regulates","term_name":"hair follicle development","termid":"GO:0001942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hair follicle development","synonyms":[{"name":"down regulation of hair follicle development","type":"exact"},{"name":"down-regulation of hair follicle development","type":"exact"},{"name":"downregulation of hair follicle development","type":"exact"},{"name":"inhibition of hair follicle development","type":"narrow"}],"termid":"GO:0051799"}


id: PBO:0111760
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family","termid":"PBO:0111760"}


id: SO:0000756
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA synthesized by reverse transcriptase using RNA as a template.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA","termid":"SO:0000352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cDNA","secondary_identifiers":["http://en.wikipedia.org/wiki/CDNA"],"synonyms":[{"name":"complementary DNA","type":"exact"}],"termid":"SO:0000756"}


id: PBO:0044416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily T member 3, pseudogene","termid":"PBO:0044416"}


id: PR:P78929
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A destrin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.06c","secondary_identifiers":["UniProtKB:P78929"],"synonyms":[{"name":"Spom972h-DSTN","type":"exact"},{"name":"actin-depolymerizing factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78929"}


id: FYPO:0004661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0004661)","synonyms":[{"name":"normal protein tyrosine phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004661"}


id: PBO:0069790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1076, pseudogene","termid":"PBO:0069790"}


id: PBO:0085902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in resistance to carboplatin and cisplatin; null mutant displays increase in spontaneous Rad52p foci; contains a lipid-binding domain and binds cardiolipin in a large-scale study","termid":"PBO:0085902"}


id: PBO:0090818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps60","termid":"PBO:0090818"}


id: GO:0099530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor activity occurring in the postsynaptic membrane that is part of a GPCR signaling pathway that positively regulates ion channel activity in the postsynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"G-protein coupled receptor activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0099530"}


id: PBO:0003975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex subunit Sfc6","termid":"PBO:0003975"}


id: GO:1900651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dehydroaustinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of dehydroaustinol biosynthetic process","termid":"GO:1900649"},{"relation_name":"positively_regulates","term_name":"dehydroaustinol biosynthetic process","termid":"GO:1900563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of dehydroaustinol biosynthetic process","synonyms":[{"name":"activation of dehydroaustinol anabolism","type":"exact"},{"name":"activation of dehydroaustinol biosynthesis","type":"exact"},{"name":"activation of dehydroaustinol biosynthetic process","type":"narrow"},{"name":"activation of dehydroaustinol formation","type":"exact"},{"name":"activation of dehydroaustinol synthesis","type":"exact"},{"name":"positive regulation of dehydroaustinol anabolism","type":"exact"},{"name":"positive regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"positive regulation of dehydroaustinol formation","type":"exact"},{"name":"positive regulation of dehydroaustinol synthesis","type":"exact"},{"name":"up regulation of dehydroaustinol anabolism","type":"exact"},{"name":"up regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"up regulation of dehydroaustinol biosynthetic process","type":"exact"},{"name":"up regulation of dehydroaustinol formation","type":"exact"},{"name":"up regulation of dehydroaustinol synthesis","type":"exact"},{"name":"up-regulation of dehydroaustinol anabolism","type":"exact"},{"name":"up-regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"up-regulation of dehydroaustinol biosynthetic process","type":"exact"},{"name":"up-regulation of dehydroaustinol formation","type":"exact"},{"name":"up-regulation of dehydroaustinol synthesis","type":"exact"},{"name":"upregulation of dehydroaustinol anabolism","type":"exact"},{"name":"upregulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"upregulation of dehydroaustinol biosynthetic process","type":"exact"},{"name":"upregulation of dehydroaustinol formation","type":"exact"},{"name":"upregulation of dehydroaustinol synthesis","type":"exact"}],"termid":"GO:1900651"}


id: PBO:0064885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 scaffold subunit Abeta","termid":"PBO:0064885"}


id: PR:O14077
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An insulin-degrading enzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11851:SF64","PRO:DNx","OMA:SCHPO01213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc protease mug138 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.12c","secondary_identifiers":["UniProtKB:O14077"],"synonyms":[{"name":"Spom972h-IDE","type":"exact"},{"name":"meiotically up-regulated gene 138 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14077"}


id: GO:0044799
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric protein complex with iron-sulfur and molybdenum cofactors that functions as a terminal reductase in electron transport pathways that operate during anaerobic nitrate respiration. In E. coli electrons are passed from the FdnGHI complex to the NarGHI complex via menoquinone and menaquinol. Within NarGHI, electrons are passed from the two heme molecules in the NarI subunit down a Fe-S cluster chain in the NarH and NarG subunits to the Molybdenum cofactor, Mo-bisMGD, in the NarG subunit.","definition_xrefs":["PMID:12910261","PMID:11289299","GOC:bhm","PMID:17964535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase complex","termid":"GO:0009325"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"NarGHI complex","synonyms":[{"name":"cytoplasmic membrane-bound quinol-nitrate oxidoreductase","type":"exact"},{"name":"nitrate reductase A","type":"exact"}],"termid":"GO:0044799"}


id: PBO:0000940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase Ura3","termid":"PBO:0000940"}


id: GO:0046595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the directed movement of mRNA to the oocyte pole plasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of RNA localization","termid":"GO:0051236"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of pole plasm mRNA localization","secondary_identifiers":["GO:0048121"],"synonyms":[{"name":"establishment of oocyte pole plasm mRNA localization","type":"exact"},{"name":"establishment of pole plasm mRNA localisation","type":"exact"}],"termid":"GO:0046595"}


id: GO:0010772
data:
  {"annotated_genes":["SJAG_03221","SJAG_01708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103801,106447],"is_not":false,"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form higher order oligomers on single-stranded DNA resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA recombinase assembly","termid":"GO:0000707"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0007049","GO:0044085","GO:0008150","GO:0006310","GO:0140013","GO:0065003","GO:0006259"],"is_obsolete":false,"name":"meiotic DNA recombinase assembly involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010772","terms_by_termid":{"GO:0010772":null}}


id: PBO:0047480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 7","termid":"PBO:0047480"}


id: PBO:0059202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X9, pseudogene","termid":"PBO:0059202"}


id: PATO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches joined together in a series of prominent arches.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brochidodromous","termid":"PATO:0001970"}


id: PBO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPX domain protein","termid":"PBO:0001542"}


id: PBO:0090539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase Rhp16b","termid":"PBO:0090539"}


id: GO:0140544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising the septin collar.","definition_xrefs":["PMID:21736496","PMID:32386534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton organization","termid":"GO:0032185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"septin collar organization","synonyms":[{"name":"cellular bud neck septin hourglass organization","type":"exact"}],"termid":"GO:0140544"}


id: SO:0000482
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","synonyms":[{"name":"vertebrate immunoglobulin T cell receptor gene cluster","type":"exact"},{"name":"vertebrate_immunoglobulin/T-cell receptor gene cluster","type":"exact"}],"termid":"SO:0000482"}


id: PBO:0076012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1 pseudogene 3","termid":"PBO:0076012"}


id: GO:0005490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome b that has a sulfur atom ligated to the iron of the prosthetic group (heme-thiolate); enzymes:typically monooxygenases acting on lipophilic substrates.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome P450 (obsolete GO:0005490)","synonyms":[{"name":"cytochrome P450","type":"exact"}],"termid":"GO:0005490"}


id: GO:0018835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alkylphosphonic acid = R-CH3 + phosphate. Substrates include aminomethylphosphonic acid (AMPA) (forms methylamine), dimethylphosphinic acid (forms methylphosphonic acid), glyphosate (forms sarcosine) and methylphosphonic acid (forms phosphate).","definition_xrefs":["PMID:3804975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"carbon phosphorus lyase activity","secondary_identifiers":["GO:0009456","EC:4.7.1.-"],"termid":"GO:0018835"}


id: PBO:0056128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal trafficking regulator","termid":"PBO:0056128"}


id: PATO:0001586
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits rate variation or change.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"rate","termid":"PATO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of rate","termid":"PATO:0001586"}


id: PBO:0055089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2507","termid":"PBO:0055089"}


id: PBO:0029338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_phosphorylation","termid":"PBO:0029338"}


id: PBO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 5 (predicted)","termid":"PBO:0002218"}


id: PBO:0030808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_cortex","termid":"PBO:0030808"}


id: GO:0010992
data:
  {"annotated_genes":["SJAG_00312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108603],"is_not":false,"summary":null,"term":"GO:0010992"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of ubiquitin monomers and free ubiquitin chains at the level of the cell by recycling ubiquitin from proteasome-bound ubiquitinated intermediates.","definition_xrefs":["PMID:19410548","GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ubiquitin recycling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010993"],"synonyms":[{"name":"regulation of ubiquitin homeostasis","type":"narrow"},{"name":"ubiquitin homeostasis","type":"related"}],"termid":"GO:0010992","terms_by_termid":{"GO:0010992":null}}


id: SO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Jockey retrotransposons are LINE elements (SO:0000194) found only in arthropods. The full-length element is ~ 5 kb and contains two open reading frames (SO:0000236), ORF1 (568 aa) and ORF2 (916 aa), the second of which encodes an apurinic endonuclease (APE) and a reverse transcriptase (RT).","definition_xrefs":["PMID:31709017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LINE_element","termid":"SO:0000194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jockey_LINE_retrotransposon","synonyms":[{"name":"Jockey LINE retrotransposon","type":"exact"},{"name":"LINE Jockey element","type":"exact"},{"name":"RIJ retrotransposon","type":"exact"}],"termid":"SO:0002271"}


id: PBO:0011518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial trancriptional repressor protein BolA domain (predicted)","termid":"PBO:0011518"}


id: GO:0098597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Learning that occurs through observing the behavior of others.","definition_xrefs":["Wikipedia:Observational_learning&oldid=603524137","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning","termid":"GO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"observational learning","secondary_identifiers":["Wikipedia:Observational_learning"],"termid":"GO:0098597"}


id: PBO:0071813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 8","termid":"PBO:0071813"}


id: GO:0070737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glycine residues to a glycine residue covalently attached to the gamma-carboxyl group of a glutamate residue on a target protein, resulting in the elongation of a polyglycine side chain.","definition_xrefs":["PMID:19524510","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glycine ligase activity","termid":"GO:0070735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016874"],"is_obsolete":false,"name":"protein-glycine ligase activity, elongating","synonyms":[{"name":"protein glycylase activity, elongating","type":"exact"}],"termid":"GO:0070737"}


id: GO:0008205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ecdysone, (22R)-2-beta,3-beta,14,22,25-pentahydroxycholest-7-en-6-one, an ecdysteroid found in insects. It is the inactive prohormone of the moulting hormone ecdysterone and may have intrinsic hormonal activity at other stages of insect development.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ecdysone metabolic process","synonyms":[{"name":"ecdysone metabolism","type":"exact"}],"termid":"GO:0008205"}


id: PBO:0084459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase involved in N-linked protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family; KTR2 has a paralog, YUR1, that arose from the whole genome duplication","termid":"PBO:0084459"}


id: GO:0048254
data:
  {"annotated_genes":["SJAG_00752","SJAG_05223"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94024,113861],"is_not":false,"summary":null,"term":"GO:0048254"}]},"cv_name":"biological_process","definition":"Any process in which small nucleolar RNA is transported to, or maintained in, a specific location.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"snoRNA localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of snoRNA localization","type":"exact"},{"name":"small nucleolar RNA localization","type":"exact"},{"name":"snoRNA localisation","type":"exact"}],"termid":"GO:0048254","terms_by_termid":{"GO:0048254":null}}


id: PBO:0036098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K36_methylation_during_vegetative_growth","termid":"PBO:0036098"}


id: GO:0002195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involved in the biosynthesis of 2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine (ms2io6A), a modified nucleoside present in position 37 (adjacent to and 3' of the anticodon) of tRNAs.","definition_xrefs":["UniPathway:UPA00729"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine-tRNA biosynthesis (obsolete GO:0002195)","termid":"GO:0002195"}


id: PBO:0030206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell","termid":"PBO:0030206"}


id: PBO:0072441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 5","termid":"PBO:0072441"}


id: GO:0052744
data:
  {"annotated_genes":["SJAG_02706","SJAG_00880","SJAG_03248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004438"},{"annotations":[92976,102110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidyl-1D-myo-inositol monophosphate + H2O = phosphatidylinositol + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_02706":null,"SJAG_03248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol monophosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052744","terms_by_termid":{"GO:0004438":null,"GO:0043812":null}}


id: PBO:0028403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ubiquinone_binding","termid":"PBO:0028403"}


id: GO:0035635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a bacterium enters a host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","PMID:21187937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry of bacterium into host cell","synonyms":[{"name":"bacterial entry into host cell","type":"exact"},{"name":"invasion of bacteria into host cell","type":"exact"}],"termid":"GO:0035635"}


id: PR:O14197
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5D6.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C5D6.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.04","synonyms":[{"name":"Spom972h-SPAC5D6.04","type":"exact"}],"termid":"PR:O14197"}


id: MOD:00296
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-D-glucuronosyl-L-serine.","definition_xrefs":["PubMed:12716131","RESID:AA0291","PubMed:10858503","Unimod:54#S","PubMed:7398618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glucuronylated residue","termid":"MOD:00447"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-D-glucuronosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(beta-D-glucopyranuronosyl)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GlcA) serine","type":"exact"},{"name":"Glucuronyl","type":"related"},{"name":"N-glucuronylation","type":"related"},{"name":"O-D-glucuronosyl-L-serine","type":"exact"},{"name":"O3-D-glucuronosyl-L-serine","type":"exact"}],"termid":"MOD:00296"}


id: GO:0060903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of meiosis I, a cell cycle process comprising the steps by which a cell progresses through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic nuclear division","termid":"GO:0045836"},{"relation_name":"is_a","term_name":"regulation of meiosis I","termid":"GO:0060631"},{"relation_name":"positively_regulates","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"positive regulation of meiosis I","termid":"GO:0060903"}


id: PBO:0045928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain containing 1","termid":"PBO:0045928"}


id: GO:0004845
data:
  {"annotated_genes":["SJAG_03708","SJAG_04709","SJAG_04354","SJAG_04713"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83504,84488,87996,111087],"is_not":false,"summary":null,"term":"GO:0004845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + UMP = 5-phospho-alpha-D-ribose 1-diphosphate + uracil.","definition_xrefs":["RHEA:13017","EC:2.4.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"uracil phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00966","MetaCyc:URACIL-PRIBOSYLTRANS-RXN"],"synonyms":[{"name":"UMP diphosphorylase activity","type":"related"},{"name":"UMP pyrophosphorylase activity","type":"related"},{"name":"UMP:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"UMP:pyrophosphate phosphoribosyltransferase activity","type":"related"},{"name":"UPRTase activity","type":"related"},{"name":"uridine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"uridine monophosphate pyrophosphorylase activity","type":"related"},{"name":"uridylate pyrophosphorylase activity","type":"related"},{"name":"uridylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0004845","terms_by_termid":{"GO:0004845":null}}


id: GO:0070324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thyroxine (T4) or triiodothyronine (T3), tyrosine-based hormones produced by the thyroid gland.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thyroid hormone binding","synonyms":[{"name":"thyroxine binding","type":"narrow"},{"name":"triiodothyronine binding","type":"narrow"}],"termid":"GO:0070324"}


id: GO:0035463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to determination of organismal asymmetry with respect to the left and right halves.","definition_xrefs":["GOC:signaling","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in determination of left/right asymmetry (obsolete GO:0035463)","synonyms":[{"name":"TGF-beta receptor signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"TGF-beta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"TGFbeta receptor signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"TGFbeta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"}],"termid":"GO:0035463"}


id: GO:0120516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a diacylglycerol + H2O = a fatty acid + a monoacylglycerol + H+.","definition_xrefs":["RHEA:32731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"diacylglycerol lipase activity","secondary_identifiers":["MetaCyc:RXN-19279","EC:3.1.1.79"],"termid":"GO:0120516"}


id: GO:1900904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hexadecanal biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of hexadecanal biosynthetic process","termid":"GO:1900902"},{"relation_name":"is_a","term_name":"positive regulation of hexadecanal metabolic process","termid":"GO:1900907"},{"relation_name":"positively_regulates","term_name":"hexadecanal biosynthetic process","termid":"GO:0006634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hexadecanal biosynthetic process","synonyms":[{"name":"activation of hexadecanal anabolism","type":"narrow"},{"name":"activation of hexadecanal biosynthesis","type":"narrow"},{"name":"activation of hexadecanal biosynthetic process","type":"narrow"},{"name":"activation of hexadecanal formation","type":"narrow"},{"name":"activation of hexadecanal synthesis","type":"narrow"},{"name":"activation of palmitaldehyde biosynthesis","type":"narrow"},{"name":"activation of palmitaldehyde biosynthetic process","type":"related"},{"name":"positive regulation of hexadecanal anabolism","type":"related"},{"name":"positive regulation of hexadecanal biosynthesis","type":"related"},{"name":"positive regulation of hexadecanal formation","type":"related"},{"name":"positive regulation of hexadecanal synthesis","type":"related"},{"name":"positive regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"positive regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"up regulation of hexadecanal anabolism","type":"related"},{"name":"up regulation of hexadecanal biosynthesis","type":"related"},{"name":"up regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"up regulation of hexadecanal formation","type":"related"},{"name":"up regulation of hexadecanal synthesis","type":"related"},{"name":"up regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"up regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"up-regulation of hexadecanal anabolism","type":"related"},{"name":"up-regulation of hexadecanal biosynthesis","type":"related"},{"name":"up-regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"up-regulation of hexadecanal formation","type":"related"},{"name":"up-regulation of hexadecanal synthesis","type":"related"},{"name":"up-regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"up-regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"upregulation of hexadecanal anabolism","type":"related"},{"name":"upregulation of hexadecanal biosynthesis","type":"related"},{"name":"upregulation of hexadecanal biosynthetic process","type":"exact"},{"name":"upregulation of hexadecanal formation","type":"related"},{"name":"upregulation of hexadecanal synthesis","type":"related"},{"name":"upregulation of palmitaldehyde biosynthesis","type":"related"},{"name":"upregulation of palmitaldehyde biosynthetic process","type":"related"}],"termid":"GO:1900904"}


id: PBO:0049657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 11","termid":"PBO:0049657"}


id: PBO:0062029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily R member 1, pseudogene","termid":"PBO:0062029"}


id: GO:0106040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of GABA-A receptor activity","termid":"GO:0106040"}


id: PBO:0042384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD276 molecule","termid":"PBO:0042384"}


id: FYPO:0008270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 56 of histone H3 occurs to a higher extent than normal.","definition_xrefs":["PMID:20299449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone acetylation during vegetative growth","termid":"FYPO:0000332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased H3-K56 acetylation during vegetative growth","termid":"FYPO:0008270"}


id: GO:1902768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoprenoid via 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["PMID:23746261","GOC:mengo_curators","GOC:TermGenie","GO_REF:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"isoprenoid biosynthetic process via 1-deoxy-D-xylulose 5-phosphate","synonyms":[{"name":"isoprenoid anabolism via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid biosynthesis via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid formation via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid synthesis via 1-deoxy-D-xylulose 5-phosphate","type":"exact"}],"termid":"GO:1902768"}


id: GO:0047717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + imidazol-4-ylacetate + NADH + O2 = 5-hydroxyimidazole-4-acetate + H2O + NAD+.","definition_xrefs":["RHEA:19425","EC:1.14.13.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"imidazoleacetate 4-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04066","MetaCyc:IMIDAZOLEACETATE-4-MONOOXYGENASE-RXN"],"synonyms":[{"name":"4-imidazoleacetate,NADH:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"imidazoleacetate hydroxylase activity","type":"related"},{"name":"imidazoleacetic hydroxylase activity","type":"exact"},{"name":"imidazoleacetic monooxygenase activity","type":"related"}],"termid":"GO:0047717"}


id: PBO:0059979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 24","termid":"PBO:0059979"}


id: GO:0046736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intentional, virally-encoded stimulation of a host humoral defense response to viral infection.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of humoral immune response in host by virus (obsolete GO:0046736)","synonyms":[{"name":"active induction of humoral immune response in host by virus","type":"related"},{"name":"active viral induction of humoral immune response in host","type":"exact"}],"termid":"GO:0046736"}


id: GO:0050343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NAD+ = trans-didehydroacyl-CoA + NADH.","definition_xrefs":["MetaCyc:TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN","EC:1.3.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trans-2-enoyl-CoA reductase (NADH) activity","secondary_identifiers":["RHEA:18177"],"synonyms":[{"name":"acyl-CoA:NAD+ trans-2-oxidoreductase activity","type":"related"}],"termid":"GO:0050343"}


id: PBO:0040343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MF-PTCD1 readthrough","termid":"PBO:0040343"}


id: PBO:0112976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein, major isoform; involved in post-transcriptional control of the proteome; binds to both proteins and to DNA, including replication origins; regulates exocytosis, vesicle transport, Ras/MAPK and rapamycin-sensitive signaling, aggresome formation, the spindle position checkpoint and meiotic commitment; protein abundance and relative distribution to the nucleus increase upon DNA replication stress; antiapoptotic gene; similar to several human 14-3-3 proteins","termid":"PBO:0112976"}


id: GO:1904658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sensory perception of sweet taste.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:1716172","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"regulation of sensory perception of sweet taste","termid":"GO:1904656"},{"relation_name":"positively_regulates","term_name":"sensory perception of sweet taste","termid":"GO:0050916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sensory perception of sweet taste","synonyms":[{"name":"activation of sensory perception of sweet taste","type":"narrow"},{"name":"activation of sweet taste perception","type":"narrow"},{"name":"positive regulation of sweet taste perception","type":"exact"},{"name":"up regulation of sensory perception of sweet taste","type":"exact"},{"name":"up regulation of sweet taste perception","type":"exact"},{"name":"up-regulation of sensory perception of sweet taste","type":"exact"},{"name":"up-regulation of sweet taste perception","type":"exact"},{"name":"upregulation of sensory perception of sweet taste","type":"exact"},{"name":"upregulation of sweet taste perception","type":"exact"}],"termid":"GO:1904658"}


id: PBO:0081543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 460","termid":"PBO:0081543"}


id: GO:1990750
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Main portion of an axon, excluding terminal, spines, or dendrites.","definition_xrefs":["PMID:11264310","PMID:24312009"],"gene_count":0,"genotype_count":0,"name":"obsolete axon shaft (obsolete GO:1990750)","synonyms":[{"name":"axonal shaft","type":"exact"}],"termid":"GO:1990750"}


id: PR:Q9HDX4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDX4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter mfc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A11.01","synonyms":[{"name":"Spom972h-mfc1","type":"exact"}],"termid":"PR:Q9HDX4"}


id: PR:000050475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein kinase wis1 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Ser-469 and Thr-473 of the amino acid sequence represented by UniProtKB:P33886. Example: UniProtKB:P33886, Ser-469, MOD:00046|Thr-473, MOD:00047.","definition_xrefs":["PMID:12181336","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase wis1 (Schizosaccharomyces pombe)","termid":"PR:000050474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wis1/Phos(S469,T473)","pombase_gene_id":"SPBC409.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: protein kinase wis1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-wis1/Phos:1","type":"exact"},{"name":"UniProtKB:P33886, Ser-469, MOD:00046|Thr-473, MOD:00047","type":"narrow"},{"name":"wis1/Phos(S469,T473)","type":"exact"}],"termid":"PR:000050475"}


id: GO:0006566
data:
  {"annotated_genes":["SJAG_00234","SJAG_00830","SJAG_02450","SJAG_00432","SJAG_00881","SJAG_03152","SJAG_03141"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108126,111961,96928,102115,106819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[90250,99900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00432":null,"SJAG_00830":null,"SJAG_00881":null,"SJAG_02450":null,"SJAG_03141":null,"SJAG_03152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"threonine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_pathwayID:met"],"synonyms":[{"name":"methionine and threonine metabolic process","type":"broad"},{"name":"methionine and threonine metabolism","type":"broad"},{"name":"threonine metabolism","type":"exact"}],"termid":"GO:0006566","terms_by_termid":{"GO:0006567":null,"GO:0009088":null}}


id: GO:0052066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The invasion by a symbiont of a host organism cell by utilizing the host phagocytosis mechanism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete entry of symbiont into host cell by promotion of host phagocytosis (obsolete GO:0052066)","synonyms":[{"name":"entry of organism into cell of other organism by promotion of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"entry of organism into cell of other organism by promotion of phagocytosis in other organism involved in symbiotic interaction","type":"related"},{"name":"entry of organism into host cell by promotion of host phagocytosis","type":"exact"},{"name":"penetration of organism into host cell by promotion of host phagocytosis","type":"exact"},{"name":"penetration of symbiont into host cell by promotion of host phagocytosis","type":"exact"}],"termid":"GO:0052066"}


id: MOD:00490
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDT-iodo-PEO-biotin","synonyms":[{"name":"EDT-iodo-PEO-biotin","type":"related"},{"name":"EDT-iodoacetyl-PEO-biotin","type":"related"}],"termid":"MOD:00490"}


id: PBO:0071337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 1","termid":"PBO:0071337"}


id: PBO:0042115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 187","termid":"PBO:0042115"}


id: PBO:0063812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1 pseudogene 4","termid":"PBO:0063812"}


id: PBO:0048104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FtsJ RNA 2'-O-methyltransferase 3","termid":"PBO:0048104"}


id: GO:0035563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of chromatin binding. Chromatin binding is the selective interaction with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.","definition_xrefs":["PMID:20404130","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromatin binding","termid":"GO:0035561"},{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromatin binding","termid":"GO:0035563"}


id: PBO:0051424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-1","termid":"PBO:0051424"}


id: PBO:0027725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_fusion","termid":"PBO:0027725"}


id: GO:0015066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of alpha-amylase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0004857","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"alpha-amylase inhibitor activity","termid":"GO:0015066"}


id: PBO:0062331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 70","termid":"PBO:0062331"}


id: PATO:0001160
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001160 unconcentrated (obsolete PATO:0001160)","termid":"PATO:0001160"}


id: PBO:0047810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXL3 overlapping transcript 1","termid":"PBO:0047810"}


id: PBO:0064451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POF1B actin binding protein","termid":"PBO:0064451"}


id: PBO:0039915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 15","termid":"PBO:0039915"}


id: PBO:0066781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 79","termid":"PBO:0066781"}


id: PBO:0071846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 41","termid":"PBO:0071846"}


id: PBO:0071847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 42","termid":"PBO:0071847"}


id: GO:1901511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-microperfuranone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"(-)-microperfuranone metabolic process","termid":"GO:1901510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(-)-microperfuranone catabolic process","synonyms":[{"name":"(-)-microperfuranone breakdown","type":"exact"},{"name":"(-)-microperfuranone catabolism","type":"exact"},{"name":"(-)-microperfuranone degradation","type":"exact"}],"termid":"GO:1901511"}


id: GO:1902029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K18 acetylation.","definition_xrefs":["PMID:22110608","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K18 acetylation (obsolete GO:1902029)","synonyms":[{"name":"activation of histone H3 acetylation at K18","type":"exact"},{"name":"activation of histone H3-K18 acetylation","type":"narrow"},{"name":"activation of histone H3K18 acetylation","type":"exact"},{"name":"positive regulation of histone H3 acetylation at K18","type":"exact"},{"name":"positive regulation of histone H3K18 acetylation","type":"exact"},{"name":"up regulation of histone H3 acetylation at K18","type":"exact"},{"name":"up regulation of histone H3-K18 acetylation","type":"exact"},{"name":"up regulation of histone H3K18 acetylation","type":"exact"},{"name":"up-regulation of histone H3 acetylation at K18","type":"exact"},{"name":"up-regulation of histone H3-K18 acetylation","type":"exact"},{"name":"up-regulation of histone H3K18 acetylation","type":"exact"},{"name":"upregulation of histone H3 acetylation at K18","type":"exact"},{"name":"upregulation of histone H3-K18 acetylation","type":"exact"},{"name":"upregulation of histone H3K18 acetylation","type":"exact"}],"termid":"GO:1902029"}


id: MOD:01674
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetaminohexosyl)-L-asparagine.","definition_xrefs":["Unimod:43#N","OMSSA:182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N4-(N-acetylamino)hexosyl-L-asparagine","synonyms":[{"name":"(S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"HexNAcAsn","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"},{"name":"N4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(2-acetylamino-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(N-acetylhexosaminyl)asparagine","type":"exact"},{"name":"N4-asparagine-beta-N-acetylhexosaminide","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4HexNAcAsn","type":"exact"},{"name":"hexNAcN","type":"exact"}],"termid":"MOD:01674"}


id: GO:0070574
data:
  {"annotated_genes":["SJAG_01007","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63617],"is_not":false,"summary":null,"term":"GO:0070574"},{"annotations":[114383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"}]},"cv_name":"biological_process","definition":"A process in which a cadmium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cadmium ion transport","termid":"GO:0015691"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cadmium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cadmium ion membrane transport","type":"exact"},{"name":"transmembrane cadmium transport","type":"exact"}],"termid":"GO:0070574","terms_by_termid":{"GO:0036249":null,"GO:0070574":null}}


id: RO:0002608
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of 'causal agent in'","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_causal_agent","termid":"RO:0002608"}


id: GO:0031777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 melanin-concentrating hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanin-concentrating hormone receptor binding","termid":"GO:0031776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1 melanin-concentrating hormone receptor binding","synonyms":[{"name":"type 1 melanin-concentrating hormone receptor ligand","type":"narrow"}],"termid":"GO:0031777"}


id: GO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-benzoylagmatine + H2O = agmatine + benzoate.","definition_xrefs":["EC:3.5.1.40","RHEA:15065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"acylagmatine amidase activity","secondary_identifiers":["KEGG_REACTION:R01425","MetaCyc:ACYLAGMATINE-AMIDASE-RXN"],"synonyms":[{"name":"acylagmatine amidohydrolase activity","type":"related"},{"name":"acylagmatine deacylase activity","type":"related"},{"name":"benzoylagmatine amidohydrolase activity","type":"related"}],"termid":"GO:0047618"}


id: FYPO:0000729
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115590],"is_not":false,"summary":null,"term":"FYPO:0000729"}],"single_locus_phenotype":[{"annotations":[115530,115579],"is_not":false,"summary":null,"term":"FYPO:0000729"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring assembly begins later than normal. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"delayed onset of actomyosin contractile ring assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"delayed actomyosin contractile ring assembly","type":"exact"},{"name":"delayed onset of actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"delayed onset of actomyosin contractile ring formation","type":"related"},{"name":"delayed onset of contractile ring assembly","type":"exact"},{"name":"delayed onset of cytokinetic contractile ring assembly","type":"exact"},{"name":"delayed onset of cytokinetic ring assembly","type":"related"},{"name":"delayed onset of cytokinetic ring formation","type":"related"},{"name":"delayed onset of mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0000729","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000729":null}}


id: PBO:0084055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP); contains Rho1p-specific GAP activity, interacting with activated forms of Rho1p; functions along with Sac7p as a negative regulator of the Pkc1p-mediated cell wall integrity signaling pathway; negative regulator of cell wall 1,3-beta-glucan biosynthesis; required for efficient cell fusion; contains a RhoGAP domain and three Lin-11-Isl1-Mec-3 (LIM) domains","termid":"PBO:0084055"}


id: GO:0042410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + pimelate = AMP + diphosphate + H+ + pimelyl-CoA.","definition_xrefs":["EC:6.2.1.14","RHEA:14781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"6-carboxyhexanoate-CoA ligase activity","secondary_identifiers":["MetaCyc:6-CARBOXYHEXANOATE--COA-LIGASE-RXN","KEGG_REACTION:R03209"],"synonyms":[{"name":"6-carboxyhexanoate:CoA ligase (AMP-forming)","type":"related"},{"name":"6-carboxyhexanoyl-CoA synthetase activity","type":"related"},{"name":"pimeloyl-CoA synthetase activity","type":"related"},{"name":"pimelyl-CoA synthetase activity","type":"related"}],"termid":"GO:0042410"}


id: PBO:0002060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 4","termid":"PBO:0002060"}


id: FYPO:0005393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which vegetative cell population growth is slower than normal, and the population growth rate decreases over successive generations.","definition_xrefs":["PomBase:mah","PMID:12196391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0001985","FYPO:0002058","FYPO:0005447","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"progressively decreasing vegetative cell population growth rate","synonyms":[{"name":"progressively decreasing cell population growth rate during vegetative growth","type":"exact"},{"name":"progressively decreasing cell population proliferation","type":"related"},{"name":"progressively decreasing cell proliferation","type":"related"},{"name":"progressively reduced cell proliferation","type":"related"},{"name":"progressively reduced vegetative cell population growth rate","type":"exact"}],"termid":"FYPO:0005393"}


id: PBO:0031402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_polarity","termid":"PBO:0031402"}


id: FYPO:0004468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell tip during cellular response to salt stress","synonyms":[{"name":"decreased protein localisation to cell tip during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell end during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell tip during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004468"}


id: PBO:0034440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_Rad52_focus_presence_during_cellular_response_to_ionizing_radiation","termid":"PBO:0034440"}


id: PBO:0086107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of the cytochrome bc(1) complex; acts as a chaperone for Rip1p and facilitates its insertion into the complex at a late stage of assembly; localized to the mitochondrial matrix; null mutant exhibits a respiratory growth defect and reduced mitochondrial zinc levels, which is characteristic of mutations affecting bc(1) complex assembly; member of the LYR protein family; human LYRM7 is a functional ortholog","termid":"PBO:0086107"}


id: GO:1901527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any abscisic acid mediated signaling pathway that is involved in stomatal movement.","definition_xrefs":["GOC:TermGenie","PMID:22730405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid-activated signaling pathway","termid":"GO:0009738"},{"relation_name":"part_of","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"abscisic acid-activated signaling pathway involved in stomatal movement","synonyms":[{"name":"abscisic acid mediated signaling pathway involved in stomatal movement","type":"related"},{"name":"abscisic acid mediated signalling involved in stomatal movement","type":"exact"}],"termid":"GO:1901527"}


id: PBO:0090696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocysteine methyltransferase","termid":"PBO:0090696"}


id: PBO:0083973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-6-phosphate dehydrogenase (G6PD); catalyzes the first step of the pentose phosphate pathway; involved in adapting to oxidative stress; protein abundance increases in response to DNA replication stress; homolog of human G6PD which is deficient in patients with hemolytic anemia; human G6PD can complement yeast zwf1 null mutant","termid":"PBO:0083973"}


id: PBO:0053246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX1 divergent transcript","termid":"PBO:0053246"}


id: PBO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl6 (predicted)","termid":"PBO:0001579"}


id: GO:0042857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine).","definition_xrefs":["GOC:jl","PMID:8837459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"chrysobactin metabolic process","synonyms":[{"name":"chrysobactin metabolism","type":"exact"}],"termid":"GO:0042857"}


id: GO:0140213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of long-chain fatty acid import into a cell.","definition_xrefs":["PMID:28178239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import into cell","termid":"GO:0140212"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid transport","termid":"GO:2000192"},{"relation_name":"negatively_regulates","term_name":"long-chain fatty acid import into cell","termid":"GO:0044539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of long-chain fatty acid import into cell","termid":"GO:0140213"}


id: FYPO:0002955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the transition from G0 phase (quiescence) to G1 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal G0 to G1 transition","synonyms":[{"name":"abnormal exit from cell quiescence","type":"exact"}],"termid":"FYPO:0002955"}


id: GO:0045922
data:
  {"annotated_genes":["SJAG_03130"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03130":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of fatty acid metabolic process","type":"exact"},{"name":"down-regulation of fatty acid metabolic process","type":"exact"},{"name":"downregulation of fatty acid metabolic process","type":"exact"},{"name":"inhibition of fatty acid metabolic process","type":"narrow"},{"name":"negative regulation of fatty acid metabolism","type":"exact"}],"termid":"GO:0045922","terms_by_termid":{"GO:0045717":null}}


id: GO:0047936
data:
  {"annotated_genes":["SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H.","definition_xrefs":["EC:1.1.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose dehydrogenase activity","termid":"GO:0004344"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glucose 1-dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUCOSE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"D-glucose dehydrogenase (NAD(P))","type":"related"},{"name":"beta-D-glucose:NAD(P)+ 1-oxidoreductase activity","type":"related"},{"name":"hexose phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0047936","terms_by_termid":{"GO:0047935":null}}


id: PBO:0003128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein Sbp1","termid":"PBO:0003128"}


id: PR:Q9P7X6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication complex GINS protein PSF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12914:SF2","OMA:SCHPO03092","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication complex GINS protein psf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.09","secondary_identifiers":["UniProtKB:Q9P7X6"],"synonyms":[{"name":"Spom972h-GINS1","type":"exact"}],"termid":"PR:Q9P7X6"}


id: FYPO:0004128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cysteine-type peptidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal cysteine-type peptidase activity","synonyms":[{"name":"abnormal caspase activity","type":"narrow"},{"name":"abnormal cysteine protease activity","type":"exact"}],"termid":"FYPO:0004128"}


id: PBO:0074109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 1 (Augustine blood group)","termid":"PBO:0074109"}


id: FYPO:0007120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to leucine starvation does not occur; arrest normally occurs in G1 phase.","definition_xrefs":["PomBase:mah","PMID:31456006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine starvation","synonyms":[{"name":"abolished cell cycle arrest in mitotic G1 phase during cellular response to leucine starvation","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine depletion","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine deprivation","type":"exact"},{"name":"abolished leucine deprivation-induced G1 arrest","type":"exact"},{"name":"abolished mitotic G1 arrest in response to leucine starvation","type":"exact"},{"name":"abolished mitotic cell cycle arrest in G1 phase in response to leucine starvation","type":"exact"},{"name":"cell cycle arrest in mitotic G1 phase in response to leucine starvation abolished","type":"exact"}],"termid":"FYPO:0007120"}


id: PBO:0079953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 6","termid":"PBO:0079953"}


id: GO:0070477
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular part that represents the innermost portion of an endospore; the endospore core is dehydrated, enriched in dipicolinic acid and divalent cations, and metabolically inactive.","definition_xrefs":["PMID:15035041","GOC:mah","PMID:18035610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endospore core","termid":"GO:0070477"}


id: GO:0050787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduce or remove the toxicity of mercuric ion. These include transport of mercury away from sensitive areas and to compartments or complexes whose purpose is sequestration of mercury ion and/or reduction of mercury ion (Hg[II]) to metallic mercury (Hg[0]).","definition_xrefs":["PMID:10774920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"response to mercury ion","termid":"GO:0046689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of mercury ion","termid":"GO:0050787"}


id: PBO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A","termid":"PBO:0001637"}


id: FYPO:0003841
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1902967","PomBase:mah","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle","termid":"FYPO:0002825"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle midzone","termid":"FYPO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone","synonyms":[{"name":"decreased protein localization to mitotic spindle midzone during mitotic cell cycle","type":"related"},{"name":"decreased protein localisation to mitotic spindle midzone","type":"exact"},{"name":"decreased protein localization to spindle midzone during mitosis","type":"exact"},{"name":"decreased protein localization to spindle midzone during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone","type":"exact"}],"termid":"FYPO:0003841"}


id: GO:0048067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental pigmentation","termid":"GO:0048066"},{"relation_name":"part_of","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle pigmentation","termid":"GO:0048067"}


id: GO:1902799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphodiesterase I activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:24559510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exonuclease activity","termid":"GO:1905777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphodiesterase I activity","synonyms":[{"name":"regulation of 5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity","type":"exact"},{"name":"regulation of 5'-NPDase activity","type":"related"},{"name":"regulation of 5'-PDE activity","type":"related"},{"name":"regulation of 5'-PDase activity","type":"related"},{"name":"regulation of 5'-exonuclease activity","type":"related"},{"name":"regulation of 5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"regulation of 5'-phosphodiesterase activity","type":"related"},{"name":"regulation of 5'NPDE activity","type":"related"},{"name":"regulation of PDE I activity","type":"exact"},{"name":"regulation of alkaline phosphodiesterase activity","type":"related"},{"name":"regulation of exonuclease I activity","type":"related"},{"name":"regulation of nucleotide pyrophosphatase/phosphodiesterase I activity","type":"exact"},{"name":"regulation of oligonucleate 5'-nucleotidohydrolase activity","type":"exact"},{"name":"regulation of orthophosphoric diester phosphohydrolase activity","type":"exact"},{"name":"regulation of phosphodiesterase activity","type":"broad"}],"termid":"GO:1902799"}


id: GO:0001849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C1q complex, a component of the classical complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"},{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"complement component C1q complex binding","termid":"GO:0001849"}


id: GO:0006341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin insulator sequence binding (obsolete GO:0006341)","synonyms":[{"name":"chromatin insulator sequence binding","type":"exact"}],"termid":"GO:0006341"}


id: SO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"4_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four_thiouridine","secondary_identifiers":["RNAMOD:058"],"synonyms":[{"name":"4-thiouridine","type":"exact"},{"name":"four thiouridine","type":"exact"},{"name":"s4U","type":"exact"}],"termid":"SO:0001350"}


id: PBO:0004427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC-50 family protein","termid":"PBO:0004427"}


id: GO:0004400
data:
  {"annotated_genes":["SJAG_03055"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98407],"is_not":false,"summary":null,"term":"GO:0004400"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidinol-phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate.","definition_xrefs":["EC:2.6.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03055":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"histidinol-phosphate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:23744","MetaCyc:HISTAMINOTRANS-RXN"],"synonyms":[{"name":"IAP transaminase activity","type":"related"},{"name":"L-histidinol phosphate aminotransferase activity","type":"related"},{"name":"L-histidinol-phosphate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"glutamic-imidazoleacetol phosphate transaminase activity","type":"related"},{"name":"histidine:imidazoleacetol phosphate transaminase activity","type":"related"},{"name":"histidinol phosphate aminotransferase activity","type":"related"},{"name":"histidinol-phosphate aminotransferase activity","type":"exact"},{"name":"imidazole acetol-phosphate transaminase activity","type":"related"},{"name":"imidazoleacetol phosphate transaminase activity","type":"related"},{"name":"imidazolylacetolphosphate aminotransferase activity","type":"related"},{"name":"imidazolylacetolphosphate transaminase activity","type":"related"}],"termid":"GO:0004400","terms_by_termid":{"GO:0004400":null}}


id: PBO:0113238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-histone component of centromeric chromatin; acts as a Cse4p specific chaperone that recognizes the centromere-targeting domain in the HFD of histone H3 variant, Cse4p, and recruits it to centromeres; involved in the assembly and maintenance of Cse4-H4 at centromeres; required for kinetochore assembly and G2/M progression; may protect Cse4p from ubiquitination; homolog of mammalian HJURP","termid":"PBO:0113238"}


id: GO:0060415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of muscle tissue are generated and organized. Muscle tissue consists of a set of cells that are part of an organ and carry out a contractive function.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"muscle organ morphogenesis","termid":"GO:0048644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle tissue morphogenesis","termid":"GO:0060415"}


id: PBO:0075550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm flagellar 2","termid":"PBO:0075550"}


id: GO:0003046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intrinsic circulatory process resulting from stress relaxation that modulates the force with which blood travels through the systemic arterial circulatory system. Stress relaxation is the adaptation of vessels to a new size as a result of changes in pressure in storage areas such as veins, the liver, the spleen, and the lungs.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by physical factors","termid":"GO:0003045"},{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by stress relaxation","synonyms":[{"name":"blood pressure regulation by stress relaxation","type":"exact"}],"termid":"GO:0003046"}


id: PBO:0111828
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPR repeats","termid":"PBO:0111828"}


id: PBO:0072652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 5","termid":"PBO:0072652"}


id: GO:0102498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + maltose = 2 glucose.","definition_xrefs":["GOC:pz","PMID:16343940"],"gene_count":0,"genotype_count":0,"name":"obsolete maltose glucosidase activity (obsolete GO:0102498)","termid":"GO:0102498"}


id: PBO:0043059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chordin","termid":"PBO:0043059"}


id: PBO:0072106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 4","termid":"PBO:0072106"}


id: GO:1905682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of innate immunity memory response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of innate immunity memory response","termid":"GO:1905680"},{"relation_name":"positively_regulates","term_name":"innate immunity memory response","termid":"GO:0090714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of innate immunity memory response","synonyms":[{"name":"activation of innate immunity memory response","type":"narrow"},{"name":"up regulation of innate immunity memory response","type":"exact"},{"name":"up-regulation of innate immunity memory response","type":"exact"},{"name":"upregulation of innate immunity memory response","type":"exact"}],"termid":"GO:1905682"}


id: GO:1900321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltotetraose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"maltotetraose transport","termid":"GO:2001099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of maltotetraose transport","termid":"GO:1900321"}


id: GO:0055067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of monovalent inorganic cations within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monovalent inorganic cation homeostasis (obsolete GO:0055067)","termid":"GO:0055067"}


id: PBO:0073658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 transcription regulator family member A","termid":"PBO:0073658"}


id: PBO:0065890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB37, member RAS oncogene family","termid":"PBO:0065890"}


id: PBO:0059604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 16","termid":"PBO:0059604"}


id: PBO:0051405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 5","termid":"PBO:0051405"}


id: PBO:0070580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 46","termid":"PBO:0070580"}


id: GO:0010923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of phosphatase activity. Phosphatases catalyze the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"},{"relation_name":"is_a","term_name":"negative regulation of dephosphorylation","termid":"GO:0035305"},{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatase activity","termid":"GO:0010923"}


id: PBO:0078259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable B (pseudogene)","termid":"PBO:0078259"}


id: GO:0009959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orientation of plant parts away from gravity.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gravitropism","termid":"GO:0009630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative gravitropism","synonyms":[{"name":"shoot gravitropism","type":"narrow"}],"termid":"GO:0009959"}


id: PBO:0017045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, predicted GPI anchor","termid":"PBO:0017045"}


id: PBO:0013773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein Atg101","termid":"PBO:0013773"}


id: PBO:0091602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid10","termid":"PBO:0091602"}


id: PBO:0073744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3","termid":"PBO:0073744"}


id: GO:0097668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Saf1 in S. cerevisiae (Pof9 in S. pombe).","definition_xrefs":["PMID:15147268","PMID:11283612","GOC:vw","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Saf1/Pof9 ubiquitin ligase complex","termid":"GO:0097668"}


id: GO:0051659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a mitochondrion is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion localization","termid":"GO:0051646"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of mitochondrion location","synonyms":[{"name":"maintenance of mitochondria localization","type":"exact"},{"name":"maintenance of mitochondrion localization","type":"related"}],"termid":"GO:0051659"}


id: PBO:0048231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 2B","termid":"PBO:0048231"}


id: PBO:0068274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 11 (inactive)","termid":"PBO:0068274"}


id: PBO:0055627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3066","termid":"PBO:0055627"}


id: PBO:0045769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 1","termid":"PBO:0045769"}


id: GO:1901338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catecholamine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"catecholamine binding","termid":"GO:1901338"}


id: PBO:0070048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 5, pseudogene","termid":"PBO:0070048"}


id: GO:0060424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the foregut into the area in which the lung will develop.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"is_a","term_name":"foregut regionalization","termid":"GO:0060423"},{"relation_name":"part_of","term_name":"primary lung bud formation","termid":"GO:0060431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung field specification","synonyms":[{"name":"lung specification","type":"exact"}],"termid":"GO:0060424"}


id: PBO:0036027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_deubiquitination_following_cellular_response_to_hydroxyurea_during_vegetative_growth","termid":"PBO:0036027"}


id: PBO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxine-pyridoxal-pyridoxamine kinase (predicted)","termid":"PBO:0001711"}


id: PBO:0067965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 267","termid":"PBO:0067965"}


id: GO:0007273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of synapse (obsolete GO:0007273)","synonyms":[{"name":"regulation of synapse","type":"exact"}],"termid":"GO:0007273"}


id: GO:0021953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system neuron differentiation","termid":"GO:0021953"}


id: PBO:0005162
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger protein","termid":"PBO:0005162"}


id: GO:0070226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a perthiol + 4 Fe3+ + 3 H2O = sulfite + a thiol + 4 Fe2+ + 8 H+.","definition_xrefs":["MetaCyc:SULFFEOXIDO-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sulfur:ferric ion oxidoreductase activity","synonyms":[{"name":"hydrogen sulfide:ferric ion oxidoreductase","type":"exact"}],"termid":"GO:0070226"}


id: GO:0005656
data:
  {"annotated_genes":["SJAG_04062","SJAG_02348","SJAG_02607","SJAG_02394","SJAG_05301","SJAG_04210","SJAG_03927","SJAG_00884","SJAG_02800","SJAG_01354","SJAG_00857","SJAG_03451","SJAG_01762","SJAG_02074","SJAG_01267"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84817,87981,93396,99429,102542,103376,103969,104185,106362,106703,107535,107797,109339,111272,111444],"is_not":false,"summary":null,"term":"GO:0005656"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex assembled at eukaryotic DNA replication origins during late mitosis and G1, allowing the origin to become competent, or 'licensed', for replication. The complex normally includes the origin recognition complex (ORC), Cdc6, Cdt1 and the MiniChromosome Maintenance (Mcm2-7) proteins.","definition_xrefs":["PMID:15222894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex","termid":"GO:0036387"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02074":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_04062":null,"SJAG_04210":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005654"],"is_obsolete":false,"name":"nuclear pre-replicative complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eukaryotic pre-replicative complex","type":"exact"},{"name":"pre-RC","type":"related"},{"name":"pre-replicative complex","type":"broad"}],"termid":"GO:0005656","terms_by_termid":{"GO:0005656":null}}


id: PBO:0051716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like 3","termid":"PBO:0051716"}


id: FYPO:0003654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which cysteine synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal cysteine synthase activity","termid":"FYPO:0002754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000002"],"is_obsolete":false,"name":"abolished cysteine synthase activity","synonyms":[{"name":"cysteine synthase activity abolished","type":"exact"}],"termid":"FYPO:0003654"}


id: FYPO:0000630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which biofilm formation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal biofilm formation","termid":"FYPO:0000630"}


id: GO:0044289
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Sites of close apposition of the inner and outer mitochondrial membrane.","definition_xrefs":["PMID:22009199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial inner-outer membrane contact site","secondary_identifiers":["GO:0044285"],"synonyms":[{"name":"bridge contact site","type":"related"},{"name":"contact site","type":"broad"}],"termid":"GO:0044289"}


id: FYPO:0001789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to oxidative stress","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to oxidative stress","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal protein localization to nucleus during oxidative stress","type":"exact"},{"name":"normal protein localization to nucleus during oxidative stress response","type":"exact"}],"termid":"FYPO:0001789"}


id: GO:0046824
data:
  {"annotated_genes":["SJAG_01245","SJAG_04312","SJAG_04464","SJAG_02592","SJAG_03048","SJAG_01805","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107161,89849,96530,97944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[90417,86878,98487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"positively_regulates","term_name":"nucleocytoplasmic transport","termid":"GO:0006913"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"positive regulation of nucleocytoplasmic transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nucleocytoplasmic transport","type":"narrow"},{"name":"stimulation of nucleocytoplasmic transport","type":"narrow"},{"name":"up regulation of nucleocytoplasmic transport","type":"exact"},{"name":"up-regulation of nucleocytoplasmic transport","type":"exact"},{"name":"upregulation of nucleocytoplasmic transport","type":"exact"}],"termid":"GO:0046824","terms_by_termid":{"GO:0042307":null,"GO:0046827":null}}


id: GO:0140464
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87371],"is_not":false,"summary":null,"term":"GO:0140464"}]},"cv_name":"biological_process","definition":"The localization of silent mating-type cassette heterochromatin at a specific location in the nucleus.","definition_xrefs":["PMID:26744419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"subnuclear spatial organization of silent mating-type cassette heterochromatin","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"silent mating-type cassette heterochromatin organization","type":"related"},{"name":"silent mating-type cassette heterochromatin spatial organization in the nucleus","type":"exact"}],"termid":"GO:0140464","terms_by_termid":{"GO:0140464":null}}


id: FYPO:0003942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of m7G(5')pppN diphosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal m7G(5')pppN diphosphatase activity","synonyms":[{"name":"normal mRNA decapping activity","type":"related"}],"termid":"FYPO:0003942"}


id: PBO:0055505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2939","termid":"PBO:0055505"}


id: PBO:0003884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carboxylic acid transporter (predicted)","termid":"PBO:0003884"}


id: PBO:0063010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 2","termid":"PBO:0063010"}


id: GO:0140090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Preferential binding of proteins on curved membranes. The binding to curved membranes by insertion (aka wedging) to curved membranes is mediated by both the hydrophobic and hydrophilic faces of the helix of membrane curvature sensing (MCS) proteins.","definition_xrefs":["PMID:25898166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140299","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"membrane curvature sensor activity","termid":"GO:0140090"}


id: PBO:0072348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 34","termid":"PBO:0072348"}


id: GO:0060997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"is_a","term_name":"dendritic spine organization","termid":"GO:0097061"},{"relation_name":"part_of","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"part_of","term_name":"dendritic spine development","termid":"GO:0060996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic spine morphogenesis","termid":"GO:0060997"}


id: GO:0060279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of ovulation","termid":"GO:0060278"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ovulation","termid":"GO:0060279"}


id: GO:0006595
data:
  {"annotated_genes":["SJAG_03288","SJAG_04546","SJAG_03632","SJAG_04904","SJAG_04481","SJAG_00043","SJAG_04130"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96861],"is_not":false,"summary":null,"term":"GO:0006595"},{"annotations":[84926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[83446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"},{"annotations":[107324],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010967"},{"annotations":[109537,98862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"},{"annotations":[98684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008216"},{"annotations":[109538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_03288":null,"SJAG_03632":null,"SJAG_04130":null,"SJAG_04481":null,"SJAG_04546":null,"SJAG_04904":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyamine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyamine metabolism","type":"exact"}],"termid":"GO:0006595","terms_by_termid":{"GO:0006595":null,"GO:0006597":null,"GO:0008216":null,"GO:0008295":null,"GO:0009447":null,"GO:0010967":null,"GO:0033387":null}}


id: PBO:0047384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 21","termid":"PBO:0047384"}


id: PBO:0063391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6 divergent transcript","termid":"PBO:0063391"}


id: PBO:0090929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ferrous iron/manganese transmembrane transporter Pcl1","termid":"PBO:0090929"}


id: PBO:0073834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 10","termid":"PBO:0073834"}


id: GO:0060562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tube are generated and organized from an epithelium. Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial tube morphogenesis","termid":"GO:0060562"}


id: GO:0090204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a nuclear pore.","definition_xrefs":["GOC:dph","GOC:tb","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nuclear envelope","termid":"GO:0090435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nuclear pore","synonyms":[{"name":"protein localisation to nuclear pore","type":"exact"}],"termid":"GO:0090204"}


id: PBO:0068578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 29, pseudogene","termid":"PBO:0068578"}


id: GO:0034416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-diphosphoglycerate + H2O = phosphoglycerate + phosphate.","definition_xrefs":["GOC:mah","PMID:18413611"],"gene_count":0,"genotype_count":0,"name":"obsolete bisphosphoglycerate phosphatase activity (obsolete GO:0034416)","synonyms":[{"name":"2,3-bisphosphoglycerate phosphatase activity","type":"exact"},{"name":"2,3-diphosphoglycerate phosphatase activity","type":"exact"},{"name":"2,3-diphosphoglyceric acid phosphatase activity","type":"exact"},{"name":"diphosphoglycerate phosphatase activity","type":"exact"},{"name":"glycerate-2,3-diphosphate phosphatase activity","type":"exact"}],"termid":"GO:0034416"}


id: GO:0016484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Required for the maturation and activation of proprotein convertase 2.","definition_xrefs":["GOC:ma","PMID:10749852"],"gene_count":0,"genotype_count":0,"name":"obsolete proprotein convertase 2 activator activity (obsolete GO:0016484)","synonyms":[{"name":"proprotein convertase 2 activator activity","type":"exact"}],"termid":"GO:0016484"}


id: PBO:0064275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H1","termid":"PBO:0064275"}


id: FYPO:0003113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sodium nitroprusside than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to sodium nitroprusside","synonyms":[{"name":"resistance to sodium nitroprusside during mitotic cell cycle","type":"related"},{"name":"resistance to sodium nitroprusside during vegetative growth","type":"exact"},{"name":"resistant to sodium nitroprusside","type":"exact"}],"termid":"FYPO:0003113"}


id: PBO:0053577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 598","termid":"PBO:0053577"}


id: PBO:0000468
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesterinosis","termid":"PBO:0000468"}


id: GO:0004468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl phosphate + L-lysine = phosphate + N6-acetyl-L-lysine.","definition_xrefs":["EC:2.3.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"lysine N-acetyltransferase activity, acting on acetyl phosphate as donor","secondary_identifiers":["MetaCyc:LYSINE-N-ACETYLTRANSFERASE-RXN","Reactome:R-HSA-5693001","RHEA:14417","Reactome:R-HSA-5618328"],"synonyms":[{"name":"LAT activity","type":"related"},{"name":"acetyl-phosphate:L-lysine 6-N-acetyltransferase activity","type":"related"},{"name":"acetyl-phosphate:L-lysine N6-acetyltransferase activity","type":"related"},{"name":"lysine N(6)-acetyltransferase activity","type":"related"},{"name":"lysine N6-acetyltransferase activity","type":"related"},{"name":"lysine acetyltransferase activity","type":"exact"}],"termid":"GO:0004468"}


id: GO:1902031
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[74893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of NADP metabolic process.","definition_xrefs":["PMID:23334421","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"regulates","term_name":"NADP metabolic process","termid":"GO:0006739"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"regulation of NADP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of NAD phosphorylation and dephosphorylation","type":"related"},{"name":"regulation of NADP (oxidized) metabolic process","type":"exact"},{"name":"regulation of NADP (oxidized) metabolism","type":"exact"},{"name":"regulation of NADP (reduced) metabolic process","type":"exact"},{"name":"regulation of NADP (reduced) metabolism","type":"exact"},{"name":"regulation of NADP metabolism","type":"exact"},{"name":"regulation of NADPH metabolic process","type":"exact"},{"name":"regulation of NADPH metabolism","type":"exact"},{"name":"regulation of nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"regulation of nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"regulation of oxidized NADP metabolic process","type":"exact"},{"name":"regulation of oxidized NADP metabolism","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"regulation of reduced NADP metabolic process","type":"exact"},{"name":"regulation of reduced NADP metabolism","type":"exact"},{"name":"regulation of reduced nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"regulation of reduced nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"}],"termid":"GO:1902031","terms_by_termid":{"GO:0043456":null,"GO:1905857":null}}


id: PBO:0055179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2603","termid":"PBO:0055179"}


id: FYPO:0005965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of lithium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lithium import","termid":"FYPO:0005964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased lithium import","synonyms":[{"name":"decreased cellular lithium import","type":"exact"},{"name":"decreased lithium import during mitotic cell cycle","type":"related"},{"name":"decreased lithium import during vegetative growth","type":"exact"},{"name":"decreased lithium import into cell","type":"exact"},{"name":"decreased lithium ion import","type":"exact"},{"name":"reduced lithium import","type":"exact"}],"termid":"FYPO:0005965"}


id: GO:0034088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion","synonyms":[{"name":"mitotic cohesion stability","type":"related"}],"termid":"GO:0034088"}


id: PBO:0070262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U12 small nuclear","termid":"PBO:0070262"}


id: PBO:0047127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM169A antisense RNA 1","termid":"PBO:0047127"}


id: GO:0061779
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Subunit of the MHC class I peptide loading complex (GO:0042824) (=PLC) involved in the assembly of the heavy-chain-beta2-microglobulin dimers of the MHC class I molecules that fold with eight to ten residue peptides in the endoplasmic reticulum. Required for the inhibition of the reduction of the disulfide bonds of the heavy chains and the assembly and stabilization of the PLC, suggesting it may play a structural rather than a catalytic role.","definition_xrefs":["GOC:dph","PMID:17603487","GOC:bhm","Intact:EBI-9013963","Intact:EBI-11896237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"MHC class I peptide loading complex","termid":"GO:0042824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005783","GO:0005789"],"is_obsolete":false,"name":"Tapasin-ERp57 complex","termid":"GO:0061779"}


id: PR:O94618
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.09","synonyms":[{"name":"Spom972h-tim21","type":"exact"}],"termid":"PR:O94618"}


id: GO:0072285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003337"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition involved in renal vesicle formation","termid":"GO:0072036"},{"relation_name":"part_of","term_name":"metanephric renal vesicle formation","termid":"GO:0072093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in metanephric renal vesicle formation","termid":"GO:0072285"}


id: PBO:0039683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family B member 1","termid":"PBO:0039683"}


id: PBO:0062606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 1 pseudogene","termid":"PBO:0062606"}


id: RO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporally_related_to","termid":"RO:0002222"}


id: PBO:0069878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1165, pseudogene","termid":"PBO:0069878"}


id: PBO:0027081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_oxidation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027081"}


id: PBO:0049336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2H2 family member C","termid":"PBO:0049336"}


id: GO:0071014
data:
  {"annotated_genes":["SJAG_00414","SJAG_02905","SJAG_00147","SJAG_04497","SJAG_01408","SJAG_02227","SJAG_03711","SJAG_02295","SJAG_03210","SJAG_02843","SJAG_01301","SJAG_02844","SJAG_01870","SJAG_04694","SJAG_04117","SJAG_01186","SJAG_04385","SJAG_02317","SJAG_01008","SJAG_03469","SJAG_04055","SJAG_00206","SJAG_05235","SJAG_00859","SJAG_00639","SJAG_02279","SJAG_02078","SJAG_03301","SJAG_00322","SJAG_03601","SJAG_02722","SJAG_05212","SJAG_02304","SJAG_04898","SJAG_04427","SJAG_00597","SJAG_03427","SJAG_01214","SJAG_00563","SJAG_01810","SJAG_00564","SJAG_04783","SJAG_00911","SJAG_03687","SJAG_00446","SJAG_05025"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83809,84358,84365,85022,88323,89406,90965,91224,91386,91441,91653,92224,92505,92905,94086,94522,94591,95124,96719,98646,98810,100155,100636,101638,101765,101989,102522,102662,103298,103780,104898,105000,105367,106197,106206,106769,107431,107897,109263,111666,111667,112137,113064,113401,115075],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[85023,86216,105004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071008"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed following the release of the spliced product from the post-spliceosomal complex and contains the excised intron and three snRNPs, either U2 or U12, U5, and either U6 or U6atac.","definition_xrefs":["GOC:krc","PMID:20149226","PMID:19239890","GOC:ab","GOC:mah","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00206":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00446":null,"SJAG_00563":null,"SJAG_00564":null,"SJAG_00597":null,"SJAG_00639":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01186":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01408":null,"SJAG_01810":null,"SJAG_01870":null,"SJAG_02078":null,"SJAG_02227":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02317":null,"SJAG_02722":null,"SJAG_02843":null,"SJAG_02844":null,"SJAG_02905":null,"SJAG_03210":null,"SJAG_03301":null,"SJAG_03427":null,"SJAG_03469":null,"SJAG_03601":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_04055":null,"SJAG_04117":null,"SJAG_04385":null,"SJAG_04427":null,"SJAG_04497":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_05025":null,"SJAG_05212":null,"SJAG_05235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"post-mRNA release spliceosomal complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mammalian spliceosomal complex I","type":"narrow"}],"termid":"GO:0071014","terms_by_termid":{"GO:0071008":null,"GO:0071014":null}}


id: PBO:0075888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 pseudogene 1","termid":"PBO:0075888"}


id: PBO:0046476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 1, endonuclease non-catalytic subunit","termid":"PBO:0046476"}


id: PR:Q9UTQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01605","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C1071.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.09c","secondary_identifiers":["UniProtKB:Q9UTQ5"],"synonyms":[{"name":"Spom972h-DNAJC9","type":"exact"}],"termid":"PR:Q9UTQ5"}


id: PBO:0047026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 91 member A1","termid":"PBO:0047026"}


id: PBO:0080572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and HMG-box DNA binding protein 1","termid":"PBO:0080572"}


id: GO:0033570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of transferrin from one side of a membrane to the other.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete transferrin transmembrane transporter activity (obsolete GO:0033570)","termid":"GO:0033570"}


id: PBO:0086761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; regulates PIS1 expression; mutant displays spore wall assembly defect in ether sensitivity screen; YPL077C is not an essential gene; YPL077C has a paralog, YBR197C, that arose from the whole genome duplication","termid":"PBO:0086761"}


id: PBO:0067144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 192, pseudogene","termid":"PBO:0067144"}


id: PBO:0042939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac hypertrophy associated epigenetic regulator 1","termid":"PBO:0042939"}


id: PBO:0029761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_elongated_vegetative_cell","termid":"PBO:0029761"}


id: GO:0001699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid by parietal cells in response to acetylcholine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric acid secretion","termid":"GO:0001696"},{"relation_name":"part_of","term_name":"cellular response to acetylcholine","termid":"GO:1905145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"acetylcholine-induced gastric acid secretion","termid":"GO:0001699"}


id: PBO:0110483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM2 pseudogene 1","termid":"PBO:0110483"}


id: GO:0008432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"JUN kinase binding","synonyms":[{"name":"JNK binding","type":"exact"}],"termid":"GO:0008432"}


id: PBO:0030682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vegetative_cell,_abnormal_cell_shape,_normal_cell_size","termid":"PBO:0030682"}


id: PBO:0046277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EQTN MOB3B IFNK C9orf72 enhancer RNA I","termid":"PBO:0046277"}


id: PBO:0075284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 25","termid":"PBO:0075284"}


id: PATO:0001909
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having three nuclei.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate","termid":"PATO:0001908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleate","termid":"PATO:0001909"}


id: GO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process, which occurs as a dividing cell ages, leading to expression of genes that are typically not expressed due to silencing by regulatory proteins.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chromatin silencing involved in replicative cell aging (obsolete GO:0001308)","synonyms":[{"name":"loss of chromatin silencing during replicative cell ageing","type":"related"},{"name":"loss of chromatin silencing involved in replicative cell aging","type":"exact"}],"termid":"GO:0001308"}


id: PBO:0042503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related 23","termid":"PBO:0042503"}


id: PBO:0039275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 3, pseudogene","termid":"PBO:0039275"}


id: GO:0140454
data:
  {"annotated_genes":["SJAG_00436"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101114],"is_not":false,"summary":null,"term":"GO:0140454"}]},"cv_name":"biological_process","definition":"The reversible aggregation of misfolded proteins and chaperones, formed to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00436":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein aggregate center assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PAC assembly","type":"broad"},{"name":"protein aggregate center formation","type":"exact"},{"name":"protein aggregate centre assembly","type":"exact"}],"termid":"GO:0140454","terms_by_termid":{"GO:0140454":null}}


id: PBO:0065843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB10, member RAS oncogene family","termid":"PBO:0065843"}


id: PBO:0069882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1170, pseudogene","termid":"PBO:0069882"}


id: PBO:0085932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; completely overlaps the verified gene YJL077C/ICS3","termid":"PBO:0085932"}


id: GO:0140985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a chemorepellent and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:30462573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled chemorepellent receptor activity","synonyms":[{"name":"G protein chemorepellent receptor activity","type":"exact"},{"name":"G-protein chemorepellent receptor activity","type":"exact"},{"name":"G-protein coupled chemorepellent receptor activity","type":"exact"}],"termid":"GO:0140985"}


id: PR:Q9URY6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sodium-coupled monocarboxylate transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02284","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urea active transporter 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.03c","secondary_identifiers":["UniProtKB:Q9URY6"],"synonyms":[{"name":"Spom972h-SLC5A8","type":"exact"}],"termid":"PR:Q9URY6"}


id: FYPO:0007392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which that are aneuploid due to the presence of an extra copy of chromosome 3 lose the extra chromosome, producing haploid daughter cells, at a higher frequency than in otherwise wild-type cells.","definition_xrefs":["PMID:22737087","PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased loss of disomic chromosome 3","synonyms":[{"name":"increased haploidisation in presence of chromosome 3 disomy","type":"related"},{"name":"increased loss of disomic chromosome 3 during mitotic cell cycle","type":"related"},{"name":"increased loss of disomic chromosome 3 during vegetative growth","type":"exact"}],"termid":"FYPO:0007392"}


id: GO:1900104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hyaluranon cable assembly.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"hyaluranon cable assembly","termid":"GO:0036118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of hyaluranon cable assembly","synonyms":[{"name":"regulation of HA cable assembly","type":"exact"}],"termid":"GO:1900104"}


id: PBO:0004530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase (predicted)","termid":"PBO:0004530"}


id: GO:0003899
data:
  {"annotated_genes":["SJAG_16460","SJAG_03014","SJAG_01313","SJAG_03144","SJAG_01713","SJAG_04030","SJAG_00619","SJAG_01562","SJAG_00119","SJAG_04408","SJAG_02070","SJAG_03761","SJAG_02101","SJAG_04261","SJAG_02627","SJAG_00637","SJAG_02600","SJAG_02506","SJAG_04161","SJAG_00458","SJAG_04934","SJAG_04894","SJAG_00731","SJAG_02653","SJAG_03578","SJAG_03035","SJAG_03468","SJAG_03921","SJAG_04994","SJAG_03181","SJAG_01444","SJAG_01765","SJAG_04106","SJAG_00399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85591,88061,89955,90143,91188,91936,97598,97637,97870,98642,100999,101920,105416,105924,108539,109971,111846,112639,112953],"is_not":false,"summary":null,"term":"GO:0003899"},{"annotations":[101456,99071,95505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003896"},{"annotations":[98793,109308,109972,101921,106832,99455,110385,88062,85592,89956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001054"},{"annotations":[90146,109973,110836,99456,89957,88063,103840,101922,92885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001055"},{"annotations":[89053,89958,88064,107632,85593,101923,94233,104581,98794,99457,109974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001056"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:pf","EC:2.7.7.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-3' RNA polymerase activity","termid":"GO:0034062"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00399":null,"SJAG_00458":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02506":null,"SJAG_02600":null,"SJAG_02627":null,"SJAG_02653":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03761":null,"SJAG_03921":null,"SJAG_04030":null,"SJAG_04106":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04894":null,"SJAG_04934":null,"SJAG_04994":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"DNA-directed 5'-3' RNA polymerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9697085","Reactome:R-HSA-203901","Reactome:R-HSA-167121","Reactome:R-HSA-9697084","Reactome:R-HSA-75869","Reactome:R-HSA-5601926","Reactome:R-HSA-111264","Reactome:R-HSA-75850","Reactome:R-HSA-167136","Reactome:R-HSA-427366","Reactome:R-HSA-75873","GO:0000129","Reactome:R-HSA-167113","Reactome:R-HSA-167117","Reactome:R-HSA-174425","Reactome:R-HSA-68913","Reactome:R-HSA-76576","Reactome:R-HSA-6781824","Reactome:R-HSA-9670149","Reactome:R-HSA-74986","MetaCyc:DNA-DIRECTED-RNA-POLYMERASE-RXN","Reactome:R-HSA-167115"],"synonyms":[{"name":"C RNA formation factors","type":"related"},{"name":"C ribonucleic acid formation factors","type":"related"},{"name":"DNA-dependent RNA nucleotidyltransferase activity","type":"related"},{"name":"DNA-dependent RNA polymerase activity","type":"related"},{"name":"DNA-dependent ribonucleate nucleotidyltransferase activity","type":"related"},{"name":"DNA-directed RNA polymerase I activity","type":"narrow"},{"name":"DNA-directed RNA polymerase II activity","type":"narrow"},{"name":"DNA-directed RNA polymerase III activity","type":"narrow"},{"name":"DNA-directed RNA polymerase activity","type":"broad"},{"name":"RNA nucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"RNA polymerase I activity","type":"narrow"},{"name":"RNA polymerase II activity","type":"narrow"},{"name":"RNA polymerase III activity","type":"narrow"},{"name":"deoxyribonucleic acid-dependent ribonucleic acid polymerase activity","type":"related"},{"name":"nucleoside-triphosphate:RNA nucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"transcriptase","type":"broad"}],"termid":"GO:0003899","terms_by_termid":{"GO:0001054":null,"GO:0001055":null,"GO:0001056":null,"GO:0003896":null,"GO:0003899":null}}


id: GO:0002617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of macrophage antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of macrophage antigen processing and presentation","termid":"GO:0002616"},{"relation_name":"negatively_regulates","term_name":"macrophage antigen processing and presentation","termid":"GO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage antigen processing and presentation","synonyms":[{"name":"down regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"down-regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"downregulation of macrophage antigen processing and presentation","type":"exact"},{"name":"inhibition of macrophage antigen processing and presentation","type":"narrow"}],"termid":"GO:0002617"}


id: PBO:0066323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and CCCH-type domains 1","termid":"PBO:0066323"}


id: MOD:01928
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks either an L-asparagine residue or an L-aspartic acid residue with a glycine residue by an isopeptide bond with formation of N-(L-isoaspartyl)glycine.","definition_xrefs":["PubMed:1826288","RESID:AA0126","ChEBI:21479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-isoaspartyl)-glycine","synonyms":[{"name":"(2S)-2-amino-4-(carboxymethyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4-(carboxymethyl)-butanediamic acid","type":"exact"},{"name":"N-(L-isoaspartyl)-glycine","type":"exact"},{"name":"N-beta-aspartylglycine","type":"exact"},{"name":"N4-(carboxymethyl)-asparagine","type":"exact"},{"name":"XLNK-4Asp-NGly","type":"exact"},{"name":"isoaspartyl glycine","type":"exact"}],"termid":"MOD:01928"}


id: GO:0075205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont. The cAMP-mediated signal transduction is defined as a series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075205)","synonyms":[{"name":"modulation by host of symbiont cAMP-mediated signaling","type":"related"},{"name":"modulation by host of symbiont cAMP-mediated signalling","type":"exact"},{"name":"regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075205"}


id: GO:0060846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a blood vessel endothelial cell fate and its capacity to differentiate into a blood vessel endothelial cell.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell fate commitment","termid":"GO:0060839"},{"relation_name":"part_of","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell fate commitment","termid":"GO:0060846"}


id: SO:0001093
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the protein molecule, interacts selectively and non-covalently with polypeptide residues.","definition_xrefs":["EBIBS:GAR","UniProt:Curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_binding_site","termid":"SO:0000410"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"protein_protein_contact","secondary_identifiers":["http://en.wikipedia.org/wiki/Protein_protein_interaction","BS:00131"],"synonyms":[{"name":"protein protein contact","type":"exact"},{"name":"protein protein contact site","type":"exact"},{"name":"protein_protein_interaction","type":"related"}],"termid":"SO:0001093"}


id: PR:000027522
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase spindle elongation protein 1 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:Q9HDY1-1, Ser-640/Ser-683/Ser-688/Ser-693, MOD:00046.","definition_xrefs":["PMID:19686686","PMID:18257517","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphase spindle elongation protein 1","termid":"PR:000027517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ase1/Phos(S640,S683,S688,S693)","pombase_gene_id":"SPAPB1A10.09","synonyms":[{"name":"PomBase_original_PRO_term_name: anaphase spindle elongation protein 1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ase1/Phos:1","type":"exact"},{"name":"ase1/Phos(S640,S683,S688,S693)","type":"exact"}],"termid":"PR:000027522"}


id: GO:0110110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of animal organ morphogenesis.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"positively_regulates","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"}


id: GO:0010626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency or extent of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:sl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"is_a","term_name":"negative regulation of glial cell proliferation","termid":"GO:0060253"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"}


id: GO:0004561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-alpha-D-glucosaminides.","definition_xrefs":["EC:3.2.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"alpha-N-acetylglucosaminidase activity","secondary_identifiers":["Reactome:R-HSA-2263496","Reactome:R-HSA-2090038","MetaCyc:3.2.1.50-RXN","Reactome:R-HSA-1678742","Reactome:R-HSA-9036052"],"synonyms":[{"name":"N-acetyl-alpha-D-glucosaminidase activity","type":"related"},{"name":"N-acetyl-alpha-glucosaminidase activity","type":"related"},{"name":"NAG activity","type":"related"},{"name":"alpha-D-2-acetamido-2-deoxyglucosidase activity","type":"related"},{"name":"alpha-N-acetyl-D-glucosaminide N-acetylglucosaminohydrolase activity","type":"related"},{"name":"alpha-acetylglucosaminidase activity","type":"related"}],"termid":"GO:0004561"}


id: GO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IV hypersensitivity","termid":"GO:0001807"},{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"negatively_regulates","term_name":"type IV hypersensitivity","termid":"GO:0001806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IV hypersensitivity","synonyms":[{"name":"down regulation of type IV hypersensitivity","type":"exact"},{"name":"down-regulation of type IV hypersensitivity","type":"exact"},{"name":"downregulation of type IV hypersensitivity","type":"exact"},{"name":"inhibition of type IV hypersensitivity","type":"narrow"}],"termid":"GO:0001808"}


id: GO:0048736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an appendage over time, from its formation to the mature structure. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appendage development","termid":"GO:0048736"}


id: GO:1901019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion transmembrane transporter activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of calcium ion transmembrane transporter activity","termid":"GO:1901019"}


id: PBO:0064424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 2","termid":"PBO:0064424"}


id: PBO:0063506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase regulatory subunit 2, pseudogene","termid":"PBO:0063506"}


id: PBO:0074213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 43 member 2","termid":"PBO:0074213"}


id: PBO:0084505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific regulatory subunit of the Glc7p protein phosphatase; regulates spore wall formation and septin organization, required for expression of some late meiotic genes and for normal localization of Glc7p","termid":"PBO:0084505"}


id: GO:0090259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of retinal ganglion cell axon guidance, the process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:tb","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"retinal ganglion cell axon guidance","termid":"GO:0031290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal ganglion cell axon guidance","termid":"GO:0090259"}


id: GO:0003080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or decreases the frequency, rate, or extent of natriuresis, the process of renal sodium excretion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of natriuresis (obsolete GO:0003080)","synonyms":[{"name":"negative regulation of natriuresis","type":"exact"}],"termid":"GO:0003080"}


id: PBO:0014608
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear Division Arrest","termid":"PBO:0014608"}


id: PBO:0080569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDFY3 antisense RNA 1","termid":"PBO:0080569"}


id: GO:0038177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting with a death receptor such that the proportion of death receptors in an active form is increased. Ligand binding to a death receptor often induces a conformational change to activate the receptor.","definition_xrefs":["GOC:mtg_apoptosis","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0140677","GO:0005488","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"death receptor agonist activity","synonyms":[{"name":"death receptor activator activity","type":"exact"}],"termid":"GO:0038177"}


id: GO:0001949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epidermal cell acquires the specialized features of a sebaceous gland cell.","definition_xrefs":["PMID:15737203","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal cell differentiation","termid":"GO:0009913"},{"relation_name":"part_of","term_name":"sebaceous gland development","termid":"GO:0048733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sebaceous gland cell differentiation","synonyms":[{"name":"sebocytes differentiation","type":"narrow"}],"termid":"GO:0001949"}


id: GO:0021937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the transfer of information from Purkinje cells to granule cell precursors resulting in an increase in rate of granule cell precursor cell proliferation.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"positive regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation","synonyms":[{"name":"Purkinje cell-granule cell precursor cell signalling involved in regulation of granule cell precursor cell proliferation","type":"exact"}],"termid":"GO:0021937"}


id: GO:0099644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a presynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to presynapse","termid":"GO:1905383"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to presynaptic membrane","synonyms":[{"name":"protein localisation in presynaptic membrane","type":"exact"},{"name":"protein localisation to presynaptic membrane","type":"exact"},{"name":"protein localization in presynaptic membrane","type":"exact"}],"termid":"GO:0099644"}


id: FYPO:0000118
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115586],"is_not":false,"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[115575,115576],"is_not":false,"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle characterized by the presence of more than one septum in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"},{"relation_name":"output_of","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00118","SJAG_01143"],"name":"multiseptate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_00118","SJAG_01143"],"single_locus_genotype_uniquenames":["mid2delta","mid1delta"],"synonyms":[{"name":"multiseptate during mitotic cell cycle","type":"related"},{"name":"multiseptate during vegetative growth","type":"exact"},{"name":"septation defects, multiple septa during vegetative growth","type":"exact"}],"termid":"FYPO:0000118","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000118":null}}


id: PBO:0044542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid oxidase activator","termid":"PBO:0044542"}


id: PBO:0078023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 13","termid":"PBO:0078023"}


id: GO:1990253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of leucine.","definition_xrefs":["PMID:19033384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leucine starvation","termid":"GO:1990253"}


id: PBO:0072526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 55","termid":"PBO:0072526"}


id: FYPO:0002954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of S-adenosyl-3-thiopropylamine measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased S-adenosyl-3-thiopropylamine level during G0","synonyms":[{"name":"increased S-adenosyl-3-thiopropylamine accumulation during G0","type":"related"},{"name":"increased S-adenosyl-3-thiopropylamine level during cell quiescence","type":"exact"},{"name":"increased S-adenosyl-3-thiopropylamine level during quiescence","type":"exact"}],"termid":"FYPO:0002954"}


id: PBO:0050132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 42","termid":"PBO:0050132"}


id: PBO:0048903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A7","termid":"PBO:0048903"}


id: PBO:0028503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0028503"}


id: PBO:0041495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 54","termid":"PBO:0041495"}


id: GO:0070171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tooth mineralization, the deposition of calcium salts in tooth structures.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biomineral tissue development","termid":"GO:0070168"},{"relation_name":"is_a","term_name":"regulation of tooth mineralization","termid":"GO:0070170"},{"relation_name":"negatively_regulates","term_name":"tooth mineralization","termid":"GO:0034505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tooth mineralization","termid":"GO:0070171"}


id: GO:0008634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of survival gene product expression (obsolete GO:0008634)","synonyms":[{"name":"down regulation of survival gene product activity","type":"broad"},{"name":"down-regulation of survival gene product activity","type":"broad"},{"name":"downregulation of survival gene product activity","type":"broad"},{"name":"inhibition of survival gene product activity","type":"narrow"},{"name":"negative regulation of survival gene product activity","type":"broad"},{"name":"negative regulation of survival gene product expression","type":"exact"},{"name":"negative regulation of survival gene products","type":"broad"}],"termid":"GO:0008634"}


id: FYPO:0002269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glutamate-ammonia ligase activity","termid":"FYPO:0002267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased glutamate-ammonia ligase activity","synonyms":[{"name":"decreased GS activity","type":"exact"},{"name":"decreased glutamine synthetase activity","type":"exact"},{"name":"decreased glutamylhydroxamic synthetase activity","type":"exact"},{"name":"reduced glutamate-ammonia ligase activity","type":"exact"}],"termid":"FYPO:0002269"}


id: PBO:0079660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 8","termid":"PBO:0079660"}


id: GO:1990608
data:
  {"annotated_genes":["SJAG_01460","SJAG_03200","SJAG_02332","SJAG_04558","SJAG_01422","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86161,99574],"is_not":false,"summary":null,"term":"GO:1990608"},{"annotations":[99573,98929,109004,107587,86160,96691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"}]},"cv_name":"biological_process","definition":"A process in which a mitotic spindle pole body is transported to, or maintained in, a specific cellular location.","definition_xrefs":["PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body localization","termid":"GO:0070631"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0051179"],"is_obsolete":false,"name":"mitotic spindle pole body localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0071789","GO:0070632"],"synonyms":[{"name":"establishment and maintenance of spindle pole body localization","type":"exact"},{"name":"establishment of spindle pole body localisation","type":"narrow"},{"name":"establishment of spindle pole body localization","type":"narrow"},{"name":"mitotic spindle pole body localization to nuclear envelope","type":"narrow"},{"name":"spindle pole body docking","type":"narrow"},{"name":"spindle pole body localisation in nuclear envelope","type":"narrow"},{"name":"spindle pole body localization in nuclear envelope","type":"narrow"},{"name":"spindle pole body localization to nuclear envelope","type":"narrow"},{"name":"spindle pole body positioning","type":"narrow"}],"termid":"GO:1990608","terms_by_termid":{"GO:0140480":null,"GO:1990608":null}}


id: PBO:0002016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nsp1","termid":"PBO:0002016"}


id: GO:0098596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Learning in which new behaviors are acquired through imitation.","definition_xrefs":["GOC:dos","Wikipedia:Imitative_learning&oldid=593192364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"observational learning","termid":"GO:0098597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imitative learning","secondary_identifiers":["Wikipedia:Imitative_learning","Wikipedia:Observational_learning#Observational_learning_compared_to_imitation"],"termid":"GO:0098596"}


id: FYPO:0006441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"increased protein kinase activity during cellular response to HU","type":"exact"}],"termid":"FYPO:0006441"}


id: PBO:0050745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 7","termid":"PBO:0050745"}


id: PBO:0005900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Valine, mitochondrial","termid":"PBO:0005900"}


id: PBO:0058334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4708","termid":"PBO:0058334"}


id: PBO:0041979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 22","termid":"PBO:0041979"}


id: GO:2000590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of metanephros development","termid":"GO:0072217"},{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration","termid":"GO:2000589"},{"relation_name":"negatively_regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"negative regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000590"}


id: FYPO:0009021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-cysteine as the nitrogen source.","definition_xrefs":["PMID:34984977","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on cysteine nitrogen source","synonyms":[{"name":"decreased growth on cysteine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on cysteine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with cysteine nitrogen source","type":"related"},{"name":"reduced cell growth on cysteine nitrogen source","type":"related"},{"name":"slow cell growth on cysteine nitrogen source","type":"narrow"}],"termid":"FYPO:0009021"}


id: PBO:0018024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIH associated cyclin-dependent protein kinase Mcs6","termid":"PBO:0018024"}


id: PBO:0038715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 10","termid":"PBO:0038715"}


id: PBO:0073478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex associated factor 29","termid":"PBO:0073478"}


id: GO:0006597
data:
  {"annotated_genes":["SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109538],"is_not":false,"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03632":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spermine anabolism","type":"exact"},{"name":"spermine biosynthesis","type":"exact"},{"name":"spermine formation","type":"exact"},{"name":"spermine synthesis","type":"exact"}],"termid":"GO:0006597","terms_by_termid":{"GO:0006597":null}}


id: PBO:0080163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge Y-linked","termid":"PBO:0080163"}


id: PBO:0001352
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rhp57delta double mutant showed a repair profile very similar to that to the rhp51delta single mutant","termid":"PBO:0001352"}


id: PBO:0049293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 12, pseudogene","termid":"PBO:0049293"}


id: PBO:0075369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 7","termid":"PBO:0075369"}


id: GO:0002949
data:
  {"annotated_genes":["SJAG_04201","SJAG_02863","SJAG_06560","SJAG_00378","SJAG_00865","SJAG_04182","SJAG_04700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94366,95545,97228,100265,112500],"is_not":false,"summary":null,"term":"GO:0002949"},{"annotations":[110410,114799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"}]},"cv_name":"biological_process","definition":"The attachment of a carbonyl group and a threonine to the amino group of the adenine residue immediately 3' of the anticodon, in tRNAs that decode ANN codons (where N is any base).","definition_xrefs":["GOC:mah","GOC:imk","PMID:21183954","PMID:23258706","PMID:19287007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine metabolic process","termid":"GO:0070525"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00378":null,"SJAG_00865":null,"SJAG_02863":null,"SJAG_04182":null,"SJAG_04201":null,"SJAG_04700":null,"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine modification","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070526"],"synonyms":[{"name":"t6A biosynthesis","type":"exact"},{"name":"t6A biosynthetic process","type":"exact"},{"name":"t6A tRNA modification","type":"exact"},{"name":"threonylcarbamoyladenosine anabolism","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthesis","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthetic process","type":"exact"},{"name":"threonylcarbamoyladenosine formation","type":"exact"},{"name":"threonylcarbamoyladenosine synthesis","type":"exact"}],"termid":"GO:0002949","terms_by_termid":{"GO:0002949":null,"GO:0072670":null}}


id: SO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small catalytic RNA motif that catalyzes self-cleavage reaction. Its name comes from its secondary structure which resembles a carpenter's hammer. The hammerhead ribozyme is involved in the replication of some viroid and some satellite RNAs.","definition_xrefs":["PMID:2436805"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"ribozymic","termid":"SO:0001186"},{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hammerhead_ribozyme","secondary_identifiers":["http://en.wikipedia.org/wiki/Hammerhead_ribozyme"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:hammerhead_ribozyme","type":"exact"},{"name":"hammerhead ribozyme","type":"exact"}],"termid":"SO:0000380"}


id: GO:0070695
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of AKTIP/FTS, FAM160A2/p107FHIP, and one or more members of the Hook family of proteins, HOOK1, HOOK2, and HOOK3. The complex is thought to promote vesicle trafficking and/or fusion, and associates with the homotypic vesicular sorting complex (the HOPS complex).","definition_xrefs":["PMID:18799622","GOC:ab","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FHF complex","termid":"GO:0070695"}


id: PBO:0050379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 3","termid":"PBO:0050379"}


id: GO:0072554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a developing blood vessel forms an endothelial lumen through which blood will flow.","definition_xrefs":["GOC:dsf","PMID:16799567","PMID:20926893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel lumenization","termid":"GO:0072554"}


id: GO:0051066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a dihydrobiopterin, a reduced pteridine derivative related to folic acid; it acts as an electron carrier in tyrosine biosynthesis and its quinoid form is produced by oxidation of tetrahydrobiopterin in several biological hydroxylation reactions.","definition_xrefs":["PMID:2557335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dihydrobiopterin metabolic process","synonyms":[{"name":"6,7-dihydrobiopterin metabolic process","type":"narrow"},{"name":"7,8-dihydrobiopterin metabolic process","type":"narrow"},{"name":"dihydrobiopterin reduction","type":"narrow"},{"name":"dihydropterin metabolic process","type":"exact"},{"name":"dihydropterin metabolism","type":"exact"}],"termid":"GO:0051066"}


id: PBO:0111058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, Human BICC1 ortholog, implicated in RNA metabolism","termid":"PBO:0111058"}


id: GO:0030346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein phosphatase 2B.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein phosphatase 2B binding","synonyms":[{"name":"calcineurin binding","type":"exact"},{"name":"protein phosphatase 3 binding","type":"related"}],"termid":"GO:0030346"}


