# terms

id: GO:0004158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (S)-dihydroorotate + O2 = H2O2 + orotate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroorotate oxidase activity (obsolete GO:0004158)","synonyms":[{"name":"(S)-dihydroorotate:oxygen oxidoreductase activity","type":"related"},{"name":"4,5-L-dihydroorotate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0004158"}


id: PBO:0030986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_metabolic_process_during_vegetative_growth","termid":"PBO:0030986"}


id: PBO:0053958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1265","termid":"PBO:0053958"}


id: PBO:0113159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog of nuclear distribution factor NudE; NUDEL; interacts with Pac1p and regulates dynein targeting to microtubule plus ends; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113159"}


id: FYPO:0000506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export is abnormal. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport during vegetative growth","termid":"FYPO:0000518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal nuclear export","synonyms":[{"name":"abnormal nuclear export during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear export during vegetative growth","type":"exact"},{"name":"nuclear export: abnormal","type":"related"}],"termid":"FYPO:0000506"}


id: GO:0090385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of a phagolysosome from a phagosome and a lysosome.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"phagolysosome assembly","termid":"GO:0001845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0044085","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"phagosome-lysosome fusion","termid":"GO:0090385"}


id: FYPO:0005010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) occurs to a greater extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:22976295"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein serine phosphorylation at RxxS site during nitrogen starvation (obsolete FYPO:0005010)","synonyms":[{"name":"increased protein serine phosphorylation at Arg-X-X-Ser site during nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation at PAS site during nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation at RxxS site during cellular response to nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation at RxxS site during nitrogen depletion","type":"exact"},{"name":"increased protein serine phosphorylation at RxxS site during nitrogen deprivation","type":"exact"},{"name":"increased protein serine phosphorylation at arginine-X-X-serine site during nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation at phospho-Akt site during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005010"}


id: GO:0005334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: norepinephrine(out) + Na+(out) + Cl-(out) = norepinephrine(in) + Na+(in) + Cl-(in).","definition_xrefs":["PMID:21752877","PMID:22519513","TC:2.A.22.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoamine transmembrane transporter activity","termid":"GO:0008504"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"norepinephrine:sodium symporter activity","secondary_identifiers":["GO:0005333","Reactome:R-HSA-5659764","Reactome:R-HSA-443997","Wikipedia:Norepinephrine_transporter"],"synonyms":[{"name":"levarterenol transporter activity","type":"exact"},{"name":"noradrenaline transporter activity","type":"exact"},{"name":"norepinephrine transmembrane transporter activity","type":"exact"},{"name":"norepinephrine:sodium:chloride symporter activity","type":"exact"},{"name":"sodium/norepinephrine symporter activity","type":"exact"}],"termid":"GO:0005334"}


id: GO:0043835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: uracil + H2O + acceptor = barbiturate + reduced acceptor; and thymine + H2O + acceptor = 5-methylbarbiturate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil/thymine dehydrogenase activity (obsolete GO:0043835)","synonyms":[{"name":"uracil/thymine dehydrogenase activity","type":"exact"},{"name":"uracil:acceptor oxidoreductase activity","type":"narrow"}],"termid":"GO:0043835"}


id: PBO:0075119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 168","termid":"PBO:0075119"}


id: GO:0051341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oxidoreductase activity","synonyms":[{"name":"oxidoreductase regulator","type":"exact"}],"termid":"GO:0051341"}


id: GO:0060631
data:
  {"annotated_genes":["SJAG_03327","SJAG_04259","SJAG_01082","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110661,102440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[109953],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[97425],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of meiosis I, a cell cycle process comprising the steps by which a cell progresses through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic nuclear division","termid":"GO:0040020"},{"relation_name":"regulates","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"regulation of meiosis I","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060631","terms_by_termid":{"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0061731
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665","SJAG_02948"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88465,103399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"},{"annotations":[71080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004748"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of 2'-deoxyribonucleoside diphosphate from ribonucleoside diphosphate, using either thioredoxin disulfide or glutaredoxin disulfide as an acceptor.","definition_xrefs":["GOC:dph","PMID:16756507","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor","termid":"GO:0016728"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNR","type":"related"},{"name":"adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"class I ribonucleotide reductase activity","type":"related"},{"name":"class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"class II ribonucleotide reductase activity","type":"related"},{"name":"class III ribonucleotide reductase activity","type":"related"},{"name":"nucleoside diphosphate reductase activity","type":"related"},{"name":"purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"ribonucleoside 5'-diphosphate reductase activity","type":"exact"},{"name":"ribonucleotide diphosphate reductase activity","type":"exact"},{"name":"ribonucleotide reductase activity","type":"broad"}],"termid":"GO:0061731","terms_by_termid":{"GO:0004748":null,"GO:0051063":null}}


id: PBO:0090194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein, implicated in trancriptional response to stress","termid":"PBO:0090194"}


id: PBO:0074296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAFB like transcription modulator","termid":"PBO:0074296"}


id: PBO:0088584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 2","termid":"PBO:0088584"}


id: GO:0052624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: demethylphylloquinol + S-adenosyl-L-methionine = H+ + phylloquinol + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:14617060","RHEA:40551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"2-phytyl-1,4-naphthoquinone methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7569","KEGG_REACTION:R06859","EC:2.1.1.329"],"synonyms":[{"name":"S-adenosyl-L-methionine:2-phytyl-1,4-naphthoquinone methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:demethylphylloquinone methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:salicylate carboxyl methyltransferase activity","type":"exact"},{"name":"SA methyltransferase activity","type":"broad"},{"name":"demethylphylloquinone methyltransferase activity","type":"exact"},{"name":"salicylate methyltransferase activity","type":"broad"},{"name":"salicylic acid methyltransferase activity","type":"broad"}],"termid":"GO:0052624"}


id: PR:Q10487
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter mfs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.16c","synonyms":[{"name":"Spom972h-mfs1","type":"exact"}],"termid":"PR:Q10487"}


id: GO:1902529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein linear polyubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:21931591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein linear polyubiquitination","termid":"GO:1902528"},{"relation_name":"is_a","term_name":"negative regulation of protein polyubiquitination","termid":"GO:1902915"},{"relation_name":"negatively_regulates","term_name":"protein linear polyubiquitination","termid":"GO:0097039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein linear polyubiquitination","synonyms":[{"name":"down regulation of M1 linkage","type":"narrow"},{"name":"down regulation of protein linear polyubiquitination","type":"exact"},{"name":"down-regulation of M1 linkage","type":"narrow"},{"name":"down-regulation of protein linear polyubiquitination","type":"exact"},{"name":"downregulation of M1 linkage","type":"narrow"},{"name":"downregulation of protein linear polyubiquitination","type":"exact"},{"name":"inhibition of M1 linkage","type":"narrow"},{"name":"inhibition of protein linear polyubiquitination","type":"narrow"},{"name":"negative regulation of M1 linkage","type":"narrow"}],"termid":"GO:1902529"}


id: PBO:0058332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4706","termid":"PBO:0058332"}


id: FYPO:0006432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which vesicle-mediated transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal vesicle-mediated transport during vegetative growth","synonyms":[{"name":"normal vesicle-mediated protein transport during vegetative growth","type":"narrow"},{"name":"normal vesicle-mediated transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006432"}


id: GO:0003776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete muscle motor activity (obsolete GO:0003776)","synonyms":[{"name":"muscle motor activity","type":"exact"}],"termid":"GO:0003776"}


id: PBO:0074011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 2","termid":"PBO:0074011"}


id: PBO:0048753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylation dependent cell adhesion molecule 1 (pseudogene)","termid":"PBO:0048753"}


id: GO:0005619
data:
  {"annotated_genes":["SJAG_03013","SJAG_03483","SJAG_02916","SJAG_04771","SJAG_03057","SJAG_04236","SJAG_01321"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86275,105213,110246,110536,113979],"is_not":false,"summary":null,"term":"GO:0005619"},{"annotations":[87789],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[83553],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"}]},"cv_name":"cellular_component","definition":"The specialized cell wall of the ascospore (spore), which is the product of meiotic division. Examples of this component are found in Fungi.","definition_xrefs":["GOC:vw","ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall","termid":"GO:0009277"},{"relation_name":"is_a","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01321":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_04236":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"ascospore wall","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type spore wall","type":"broad"}],"termid":"GO:0005619","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null}}


id: GO:0006081
data:
  {"annotated_genes":["SJAG_00707","SJAG_01383","SJAG_00252","SJAG_01596","SJAG_04263","SJAG_01457","SJAG_01543","SJAG_01432","SJAG_00501","SJAG_05256","SJAG_01881","SJAG_02106","SJAG_03934","SJAG_00281","SJAG_04674","SJAG_00691","SJAG_02960","SJAG_04404","SJAG_04192","SJAG_02988","SJAG_04726","SJAG_00070","SJAG_00283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[91591,99593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"},{"annotations":[112533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046166"},{"annotations":[89156,89155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903189"},{"annotations":[97120,101208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[88469,108971,96413,84008,98904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[101165,58890,60505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"},{"annotations":[92427,84973,104566,109980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009052"},{"annotations":[95777,111870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[96962,110559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[83758,91549,63539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00252":null,"SJAG_00281":null,"SJAG_00283":null,"SJAG_00501":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01432":null,"SJAG_01457":null,"SJAG_01543":null,"SJAG_01596":null,"SJAG_01881":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_03934":null,"SJAG_04192":null,"SJAG_04263":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular aldehyde metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"aldehyde metabolism","type":"exact"},{"name":"alkanal metabolic process","type":"exact"},{"name":"alkanal metabolism","type":"exact"}],"termid":"GO:0006081","terms_by_termid":{"GO:0009052":null,"GO:0009436":null,"GO:0009443":null,"GO:0010144":null,"GO:0019243":null,"GO:0036001":null,"GO:0042821":null,"GO:0042823":null,"GO:0046166":null,"GO:0046294":null,"GO:0061727":null,"GO:1903189":null}}


id: PBO:0063768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 1","termid":"PBO:0063768"}


id: PBO:0076904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX101 pseudogene 1","termid":"PBO:0076904"}


id: PBO:0061276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase organizer 1","termid":"PBO:0061276"}


id: GO:0018022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-lysine to form either the mono-, di- or trimethylated derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine methylation","termid":"GO:0018022"}


id: SO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the reduction of a the 5'UTR with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_truncation","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"5 prime UTR truncation","type":"exact"},{"name":"Jannovar:5_prime_utr_truncation","type":"exact"},{"name":"snpEff:UTR_5_DELETED","type":"exact"}],"termid":"SO:0002013"}


id: PATO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000347 sporophyte incompatible value (obsolete PATO:0000347)","termid":"PATO:0000347"}


id: GO:0048162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when many layers of follicle cells surround the oocyte. There is a yolk nucleus (Balbiani's Body) near the germinal vesicle.","definition_xrefs":["GOC:mtg_sensu","GOC:jid","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-layer follicle stage","synonyms":[{"name":"mammalian oogenesis stage 5","type":"exact"}],"termid":"GO:0048162"}


id: PBO:0018171
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0018171"}


id: GO:1900305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of laminaritriose transport","termid":"GO:1900303"},{"relation_name":"positively_regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of laminaritriose transport","synonyms":[{"name":"activation of laminaritriose transport","type":"narrow"},{"name":"up regulation of laminaritriose transport","type":"exact"},{"name":"up-regulation of laminaritriose transport","type":"exact"},{"name":"upregulation of laminaritriose transport","type":"exact"}],"termid":"GO:1900305"}


id: PBO:0087993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase; required for the ct6A tRNA base modification, where an adenosine at position 37 is modified to form a cyclized active ester with an oxazolone ring; localized to the mitochondrial outer membrane; TCD2 has a paralog, TCD1, that arose from the whole genome duplication","termid":"PBO:0087993"}


id: PBO:0041712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CALML3 antisense RNA 1","termid":"PBO:0041712"}


id: PBO:0044927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase epsilon","termid":"PBO:0044927"}


id: GO:1990180
data:
  {"annotated_genes":["SJAG_01704","SJAG_02288","SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79067,83771,106042,114113],"is_not":false,"summary":null,"term":"GO:1990180"}]},"cv_name":"biological_process","definition":"The process in which the 3' end of a pre-tRNA molecule is converted to that of a mature tRNA in the mitochondrion.","definition_xrefs":["GOC:TermGenie","GOC:mah","PMID:23928301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 3'-end processing","termid":"GO:0000965"},{"relation_name":"is_a","term_name":"tRNA 3'-end processing","termid":"GO:0042780"},{"relation_name":"is_a","term_name":"mitochondrial tRNA processing","termid":"GO:0090646"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tRNA 3' processing in mitochondria","type":"exact"},{"name":"tRNA 3' processing in mitochondrion","type":"exact"},{"name":"tRNA 3'-end processing in mitochondria","type":"exact"}],"termid":"GO:1990180","terms_by_termid":{"GO:1990180":null}}


id: GO:0099158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transport or maintenance of location of a postsynaptic recycling endosome within the postsynapse.","definition_xrefs":["GOC:dos","PMID:20098723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"regulates","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of recycling endosome localization within postsynapse","termid":"GO:0099158"}


id: GO:0140534
data:
  {"annotated_genes":["SJAG_01240","SJAG_04294","SJAG_01999","SJAG_04119","SJAG_02875","SJAG_03841","SJAG_02065","SJAG_02776","SJAG_02914","SJAG_01305","SJAG_01178","SJAG_00277","SJAG_03115","SJAG_00295","SJAG_01051","SJAG_01389","SJAG_04384","SJAG_02354","SJAG_02208","SJAG_03280","SJAG_01134","SJAG_01069","SJAG_00790","SJAG_02804","SJAG_04370","SJAG_01349","SJAG_04821","SJAG_05414","SJAG_06425","SJAG_00360","SJAG_03535","SJAG_01166","SJAG_03672","SJAG_04881","SJAG_01709","SJAG_03333","SJAG_02867","SJAG_01006","SJAG_04451","SJAG_02437","SJAG_03311","SJAG_01558","SJAG_03710","SJAG_01929","SJAG_00175","SJAG_01223","SJAG_05274","SJAG_02588","SJAG_03261","SJAG_00924","SJAG_01940","SJAG_03955","SJAG_03930","SJAG_04127","SJAG_04956","SJAG_03416","SJAG_00959","SJAG_00064","SJAG_03737","SJAG_04090","SJAG_00846","SJAG_03292","SJAG_03066","SJAG_06383","SJAG_02913","SJAG_03345","SJAG_05348","SJAG_01750","SJAG_03801","SJAG_02330","SJAG_04435","SJAG_05278","SJAG_01127"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107802,96105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070939"},{"annotations":[99628,97281,110554,108408,87688,90873,110004,100903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072546"},{"annotations":[89119,88358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034663"},{"annotations":[106292,93103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031211"},{"annotations":[103784,112797,86927,103655,101966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032865"},{"annotations":[83979,110294,107150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043529"},{"annotations":[114698,83414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017177"},{"annotations":[112313,99154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990529"},{"annotations":[87247,85582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120097"},{"annotations":[113420,89023,89112,104721,106069,107755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000506"},{"annotations":[88248,99830,83474,87419,110108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042765"},{"annotations":[85287,101418,100935,103810,105704,113340,100089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"},{"annotations":[85548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990604"},{"annotations":[91376,96115,113500,95732,97441,98673,113032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008250"},{"annotations":[87267,104536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160005"},{"annotations":[94125,105475,104446,102290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005784"},{"annotations":[91795,105769,86612,106550],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031207"},{"annotations":[108717,83682,99937,94498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005787"},{"annotations":[90322,105895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005785"},{"annotations":[94126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071261"},{"annotations":[99688,94764,94424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043541"},{"annotations":[85291,100092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034098"}]},"cv_name":"cellular_component","definition":"A protein complex that is part of an endoplasmic reticulum.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":73,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00277":null,"SJAG_00295":null,"SJAG_00360":null,"SJAG_00790":null,"SJAG_00846":null,"SJAG_00924":null,"SJAG_00959":null,"SJAG_01006":null,"SJAG_01051":null,"SJAG_01069":null,"SJAG_01127":null,"SJAG_01134":null,"SJAG_01166":null,"SJAG_01178":null,"SJAG_01223":null,"SJAG_01240":null,"SJAG_01305":null,"SJAG_01349":null,"SJAG_01389":null,"SJAG_01558":null,"SJAG_01709":null,"SJAG_01750":null,"SJAG_01929":null,"SJAG_01940":null,"SJAG_01999":null,"SJAG_02065":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02437":null,"SJAG_02588":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02867":null,"SJAG_02875":null,"SJAG_02913":null,"SJAG_02914":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03261":null,"SJAG_03280":null,"SJAG_03292":null,"SJAG_03311":null,"SJAG_03333":null,"SJAG_03345":null,"SJAG_03416":null,"SJAG_03535":null,"SJAG_03672":null,"SJAG_03710":null,"SJAG_03737":null,"SJAG_03801":null,"SJAG_03841":null,"SJAG_03930":null,"SJAG_03955":null,"SJAG_04090":null,"SJAG_04119":null,"SJAG_04127":null,"SJAG_04294":null,"SJAG_04370":null,"SJAG_04384":null,"SJAG_04435":null,"SJAG_04451":null,"SJAG_04821":null,"SJAG_04881":null,"SJAG_04956":null,"SJAG_05274":null,"SJAG_05278":null,"SJAG_05348":null,"SJAG_05414":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"endoplasmic reticulum protein-containing complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140534","terms_by_termid":{"GO:0000506":null,"GO:0000836":null,"GO:0005784":null,"GO:0005785":null,"GO:0005787":null,"GO:0008250":null,"GO:0017177":null,"GO:0031207":null,"GO:0031211":null,"GO:0032865":null,"GO:0034098":null,"GO:0034663":null,"GO:0042765":null,"GO:0043529":null,"GO:0043541":null,"GO:0070939":null,"GO:0071261":null,"GO:0072546":null,"GO:0120097":null,"GO:0160005":null,"GO:1990529":null,"GO:1990604":null}}


id: FYPO:0007110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain fewer microtubule bundles associated with the spindle pole body than normal during meiosis I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundles present in decreased numbers","termid":"FYPO:0002818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"microtubule bundles present in decreased numbers at spindle pole body during meiosis I","synonyms":[{"name":"decreased level of MT bundles at spindle pole body during meiosis I","type":"exact"},{"name":"decreased number of microtubule bundles at spindle pole body during meiosis I","type":"exact"},{"name":"meiosis I SPB microtubule bundles present in decreased numbers","type":"exact"},{"name":"microtubule bundles present in decreased numbers at SPB during meiosis I","type":"exact"},{"name":"microtubule bundles present in lower numbers at spindle pole body during meiosis I","type":"exact"},{"name":"microtubule bundles present in reduced numbers at spindle pole body during meiosis I","type":"exact"}],"termid":"FYPO:0007110"}


id: PBO:0056903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIF antisense RNA 1","termid":"PBO:0056903"}


id: PBO:0043795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceruloplasmin and hephaestin like 1, pseudogene","termid":"PBO:0043795"}


id: GO:0061006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation that contributes to the shaping of the kidney.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in kidney morphogenesis","termid":"GO:0061006"}


id: GO:0042960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of antimonite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimonite transmembrane transporter activity","termid":"GO:0015104"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"antimonite secondary active transmembrane transporter activity","synonyms":[{"name":"antimonite porter activity","type":"related"}],"termid":"GO:0042960"}


id: PBO:0034785
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear PassenGer","termid":"PBO:0034785"}


id: PR:Q09773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug62 gene.","definition_xrefs":["UniProtKB:Q09773","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 62 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.04","synonyms":[{"name":"Spom972h-mug62","type":"exact"}],"termid":"PR:Q09773"}


id: PBO:0088760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase Pcs60","termid":"PBO:0088760"}


id: GO:0050694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyllactosamine + 3'-phosphoadenosine 5'-phosphosulfate = 3-sulfo-N-acetyllactosamine + adenosine 3',5'-bisphosphate. N-acetyllactosamine residues are found in a number of different carbohydrate types. N-acetyllactosamine can also be written as Gal-beta-(1,4)-GlcNAc.","definition_xrefs":["GOC:ai","PMID:11323440","PMID:11356829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"galactose 3-O-sulfotransferase activity","synonyms":[{"name":"Gal-3-O-sulfotransferase activity","type":"exact"},{"name":"galactose 3-O-sulphotransferase activity","type":"exact"}],"termid":"GO:0050694"}


id: PBO:0058534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6079","termid":"PBO:0058534"}


id: PBO:0070930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 38","termid":"PBO:0070930"}


id: GO:0035346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of hypoxanthine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of hypoxanthine transport","termid":"GO:0035345"},{"relation_name":"positively_regulates","term_name":"hypoxanthine transport","termid":"GO:0035344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of hypoxanthine transport","synonyms":[{"name":"positive regulation of 6-hydroxypurine transport","type":"exact"}],"termid":"GO:0035346"}


id: PBO:0034224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_plesiomorphy_relationship_with","termid":"PBO:0034224"}


id: PBO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.54","termid":"PBO:0000382"}


id: GO:0120133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly of actin cortical patches.","definition_xrefs":["PMID:19962315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"negatively_regulates","term_name":"actin cortical patch assembly","termid":"GO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"negative regulation of actin cortical patch assembly","synonyms":[{"name":"down regulation of actin cortical patch assembly","type":"exact"},{"name":"down-regulation of actin cortical patch assembly","type":"exact"},{"name":"downregulation of actin cortical patch assembly","type":"exact"},{"name":"inhibition of actin cortical patch assembly","type":"narrow"}],"termid":"GO:0120133"}


id: PBO:0041156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 11","termid":"PBO:0041156"}


id: PBO:0067745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 44","termid":"PBO:0067745"}


id: GO:0007206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating G protein-coupled receptor signaling pathway initiated by glutamate binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:tb","GOC:dph","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor signaling pathway","termid":"GO:0007216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating G protein-coupled glutamate receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by G-protein coupled glutamate receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by metabotropic glutamate receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by metabotropic glutamate receptor signalling pathway","type":"related"},{"name":"metabotropic glutamate receptor, phospholipase C activating pathway","type":"related"},{"name":"phospholipase C-activating G-protein coupled glutamate receptor signaling pathway","type":"related"}],"termid":"GO:0007206"}


id: GO:0102734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: castasterone + O2 + reduced [NADPH--hemoprotein reductase] = brassinolide + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. Broad specificity for several brassinosteroids, including castasterone, teasterone, and typhasterol.","definition_xrefs":["EC:1.14.14.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"brassinolide synthase activity","secondary_identifiers":["MetaCyc:RXN-720"],"termid":"GO:0102734"}


id: GO:0140625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the opioid growth factor (OGF, met-enkephalin) and transmitting the signal across the nuclear membrane. Met-enkephalin is an endogenous opioid peptide that binds to opioid and opioid growth factor receptors, regulating tissue growth in a variety of cellular processes.","definition_xrefs":["PMID:11890982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide receptor activity","termid":"GO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"opioid growth factor receptor activity","synonyms":[{"name":"met-enkephalin receptor activity","type":"related"},{"name":"metenkefalin receptor activity","type":"related"},{"name":"methionine enkephalin receptor activity","type":"exact"}],"termid":"GO:0140625"}


id: GO:0008345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotory behavior in a larval (immature) organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"larval behavior","termid":"GO:0030537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval locomotory behavior","synonyms":[{"name":"larval locomotory behaviour","type":"exact"}],"termid":"GO:0008345"}


id: GO:0061144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a secondary alveolar septum over time, from its formation to the mature structure. A secondary alveolar septum is a specialized epithelium that subdivides the initial saccule.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelium development","termid":"GO:0060428"},{"relation_name":"part_of","term_name":"lung saccule development","termid":"GO:0060430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alveolar secondary septum development","termid":"GO:0061144"}


id: GO:0140596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large mitochondrial outer membrane translocase complex that mediates transport of proteins into mitochondrial compartments. TOM transports beta-barrel precursors across the outer membrane and the sorting and assembly machinery (SAM complex) inserts them into the target membrane.","definition_xrefs":["PMID:33035511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial outer membrane translocase complex","termid":"GO:0005742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"TOM complex","synonyms":[{"name":"translocase of the outer mitochondrial membrane","type":"exact"}],"termid":"GO:0140596"}


id: PR:O13730
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A muskelin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01545","PANTHER:PTHR15526:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei4-dependent protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.10","secondary_identifiers":["UniProtKB:O13730"],"synonyms":[{"name":"Spom972h-MKLN1","type":"exact"}],"termid":"PR:O13730"}


id: GO:0090352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the uptake, from the environment, of nitrates, inorganic or organic salts and esters of nitric acid and the subsequent reduction of nitrate ion to other, less highly oxidized, inorganic nitrogenous substances.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"regulates","term_name":"nitrate assimilation","termid":"GO:0042128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0071941","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of nitrate assimilation","termid":"GO:0090352"}


id: PBO:0029660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029660"}


id: PBO:0052746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 38","termid":"PBO:0052746"}


id: GO:0050775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendrite morphogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell morphogenesis","termid":"GO:0010770"},{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"regulation of dendrite morphogenesis","termid":"GO:0048814"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"positively_regulates","term_name":"dendrite morphogenesis","termid":"GO:0048813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendrite morphogenesis","synonyms":[{"name":"activation of dendrite morphogenesis","type":"narrow"},{"name":"stimulation of dendrite morphogenesis","type":"narrow"},{"name":"up regulation of dendrite morphogenesis","type":"exact"},{"name":"up-regulation of dendrite morphogenesis","type":"exact"},{"name":"upregulation of dendrite morphogenesis","type":"exact"}],"termid":"GO:0050775"}


id: PBO:0001612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U6","termid":"PBO:0001612"}


id: PBO:0002608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Hca4 (predicted)","termid":"PBO:0002608"}


id: GO:0047808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tartrate = H2O + oxaloacetate.","definition_xrefs":["RHEA:18289","EC:4.2.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D(-)-tartrate dehydratase activity","secondary_identifiers":["MetaCyc:D--TARTRATE-DEHYDRATASE-RXN","KEGG_REACTION:R00340"],"synonyms":[{"name":"(S,S)-tartrate hydro-lyase (oxaloacetate-forming)","type":"related"},{"name":"(S,S)-tartrate hydro-lyase activity","type":"related"},{"name":"D-tartrate dehydratase activity","type":"related"}],"termid":"GO:0047808"}


id: PBO:0079548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 1","termid":"PBO:0079548"}


id: GO:0032341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldosterone, a corticosteroid hormone that is produced by the zona glomerulosa of the adrenal cortex and regulates salt (sodium and potassium) and water balance.","definition_xrefs":["PMID:16527843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"C21-steroid hormone metabolic process","termid":"GO:0008207"},{"relation_name":"is_a","term_name":"mineralocorticoid metabolic process","termid":"GO:0008212"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"aldosterone metabolic process","synonyms":[{"name":"aldosterone metabolism","type":"exact"}],"termid":"GO:0032341"}


id: RO:0002350
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"is member of is a mereological relation between a item and a collection.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"member_of","termid":"RO:0002350"}


id: GO:0099020
data:
  {"annotated_genes":["SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89123],"is_not":false,"summary":null,"term":"GO:0099020"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the perinuclear endoplasmic reticulum.","definition_xrefs":["GOC:vw","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"perinuclear endoplasmic reticulum","termid":"GO:0097038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"perinuclear endoplasmic reticulum lumen","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099020","terms_by_termid":{"GO:0099020":null}}


id: FYPO:0006415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindles in adjacent dividing nuclei overlap during meiosis II.","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000120","FYPO:0000002"],"is_obsolete":false,"name":"overlapping meiosis II spindles","synonyms":[{"name":"overlapping spindles at meiosis II","type":"exact"},{"name":"overlapping spindles during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006415"}


id: PBO:0086979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the type I protein phosphatase (PP1) Glc7p; Glc7p participates in the regulation of a variety of metabolic processes including mitosis and glycogen metabolism; in vitro evidence suggests Ypi1p is an inhibitor of Glc7p while in vivo evidence suggests it is an activator; overproduction causes decreased cellular content of glycogen; partial depletion causes lithium sensitivity, while overproduction confers lithium-tolerance","termid":"PBO:0086979"}


id: PBO:0060734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 3","termid":"PBO:0060734"}


id: GO:0140033
data:
  {"annotated_genes":["SJAG_02625","SJAG_00837","SJAG_02500","SJAG_02701","SJAG_00591","SJAG_05252"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77527,75821,69793,77657,78764,74211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070577"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon acetylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02500":null,"SJAG_02625":null,"SJAG_02701":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"acetylation-dependent protein binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0140033","terms_by_termid":{"GO:0070577":null}}


id: PBO:0047560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF13 antisense RNA 1","termid":"PBO:0047560"}


id: GO:1900628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of arugosin biosynthetic process","termid":"GO:1900626"},{"relation_name":"positively_regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of arugosin biosynthetic process","synonyms":[{"name":"activation of arugosin anabolism","type":"exact"},{"name":"activation of arugosin biosynthesis","type":"exact"},{"name":"activation of arugosin biosynthetic process","type":"narrow"},{"name":"activation of arugosin formation","type":"exact"},{"name":"activation of arugosin synthesis","type":"exact"},{"name":"positive regulation of arugosin anabolism","type":"exact"},{"name":"positive regulation of arugosin biosynthesis","type":"exact"},{"name":"positive regulation of arugosin formation","type":"exact"},{"name":"positive regulation of arugosin synthesis","type":"exact"},{"name":"up regulation of arugosin anabolism","type":"exact"},{"name":"up regulation of arugosin biosynthesis","type":"exact"},{"name":"up regulation of arugosin biosynthetic process","type":"exact"},{"name":"up regulation of arugosin formation","type":"exact"},{"name":"up regulation of arugosin synthesis","type":"exact"},{"name":"up-regulation of arugosin anabolism","type":"exact"},{"name":"up-regulation of arugosin biosynthesis","type":"exact"},{"name":"up-regulation of arugosin biosynthetic process","type":"exact"},{"name":"up-regulation of arugosin formation","type":"exact"},{"name":"up-regulation of arugosin synthesis","type":"exact"},{"name":"upregulation of arugosin anabolism","type":"exact"},{"name":"upregulation of arugosin biosynthesis","type":"exact"},{"name":"upregulation of arugosin biosynthetic process","type":"exact"},{"name":"upregulation of arugosin formation","type":"exact"},{"name":"upregulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900628"}


id: PBO:0031531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_oxidoreductase_activity","termid":"PBO:0031531"}


id: PBO:0045054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in lymphocytic leukemia 2","termid":"PBO:0045054"}


id: CHEBI:22907
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleomycin","termid":"CHEBI:22907"}


id: PBO:0042082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 149","termid":"PBO:0042082"}


id: PBO:0081786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 713","termid":"PBO:0081786"}


id: PBO:0057984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3910-2","termid":"PBO:0057984"}


id: GO:0042344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole glucosinolates, sulfur-containing compounds that have a common structure linked to an R group derived from tryptophan.","definition_xrefs":["PMID:29122987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosinolate catabolic process","termid":"GO:0019762"},{"relation_name":"is_a","term_name":"indole glucosinolate metabolic process","termid":"GO:0042343"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"indole glucosinolate catabolic process","synonyms":[{"name":"indole glucosinolate breakdown","type":"exact"},{"name":"indole glucosinolate catabolism","type":"exact"},{"name":"indole glucosinolate degradation","type":"exact"}],"termid":"GO:0042344"}


id: GO:0015744
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"},{"annotations":[97749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071422"}]},"cv_name":"biological_process","definition":"The directed movement of succinate, the dianion of ethane dicarboxylic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"succinate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015744","terms_by_termid":{"GO:0071422":null,"GO:0098720":null}}


id: PBO:0083116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication initiation factor; recruited to MCM pre-RC complexes at replication origins; promotes release of MCM from Mcm10p, recruits elongation machinery; binds tightly to ssDNA, which disrupts interaction with the MCM helicase and stalls it during replication stress; mutants in human homolog may cause velocardiofacial and DiGeorge syndromes","termid":"PBO:0083116"}


id: GO:0070192
data:
  {"annotated_genes":["SJAG_04143","SJAG_00646","SJAG_01263","SJAG_03680","SJAG_00727","SJAG_03989","SJAG_03926","SJAG_02624","SJAG_00207","SJAG_01538","SJAG_02814","SJAG_02286","SJAG_03092","SJAG_03161","SJAG_00678","SJAG_02761","SJAG_03683","SJAG_00756","SJAG_03540","SJAG_03698","SJAG_04076","SJAG_01805","SJAG_03685","SJAG_03048","SJAG_00794","SJAG_05226","SJAG_01777","SJAG_04508","SJAG_05196","SJAG_05260","SJAG_03287","SJAG_01613","SJAG_04950","SJAG_02606"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89872,83904],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[88908,83794,103959,106697,107375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007129"},{"annotations":[85626,113249],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"},{"annotations":[102072,85796],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[98928,96006,83438,101223,85797],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[91363,98539,114329,105285,89839,114846,112100,95307,96470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[108206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010032"},{"annotations":[109394,107841,84038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045144"},{"annotations":[112120,92785,113886,83439,113745,102073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[110157,102074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"},{"annotations":[98494],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"A process of chromosome organization that is involved in a meiotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00727":null,"SJAG_00756":null,"SJAG_00794":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01613":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_02286":null,"SJAG_02606":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03161":null,"SJAG_03287":null,"SJAG_03540":null,"SJAG_03680":null,"SJAG_03683":null,"SJAG_03685":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04143":null,"SJAG_04508":null,"SJAG_04950":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"chromosome organization involved in meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome organisation involved in meiosis","type":"exact"},{"name":"meiotic chromosome organization","type":"exact"}],"termid":"GO:0070192","terms_by_termid":{"GO:0007129":null,"GO:0010032":null,"GO:0030999":null,"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0045144":null,"GO:0051456":null,"GO:0062123":null,"GO:0070197":null,"GO:1990571":null}}


id: GO:0036332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with placental growth factor (PlGF) receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["PMID:7929268","PMID:12871269","GOC:uh","Wikipedia:Placental_growth_factor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0038023","GO:0003824","GO:0140096","GO:0016301","GO:0004672"],"is_obsolete":false,"name":"placental growth factor receptor activity","secondary_identifiers":["EC:2.7.10.1"],"synonyms":[{"name":"PlGF receptor activity","type":"related"},{"name":"PlGF-activated receptor activity","type":"exact"},{"name":"placental growth factor-activated receptor activity","type":"exact"}],"termid":"GO:0036332"}


id: PBO:0049943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIC ZBTB transcriptional repressor 1","termid":"PBO:0049943"}


id: GO:0030074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A thylakoid; as in, but not restricted to, the purple bacteria and relatives (Proteobacteria, ncbi_taxonomy_id:1224).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete thylakoid (sensu Proteobacteria) (obsolete GO:0030074)","synonyms":[{"name":"thylakoid (sensu Proteobacteria)","type":"exact"}],"termid":"GO:0030074"}


id: PBO:0074516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A8","termid":"PBO:0074516"}


id: PBO:0108571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-K4 methyltransferase Set1","termid":"PBO:0108571"}


id: PBO:0040159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASIC4 antisense RNA 1","termid":"PBO:0040159"}


id: PBO:0047290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 1","termid":"PBO:0047290"}


id: PBO:0073157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit beta","termid":"PBO:0073157"}


id: PBO:0034084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-expressed_in","termid":"PBO:0034084"}


id: PBO:0072600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSF1 intronic transcript 1","termid":"PBO:0072600"}


id: PBO:0072415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 20","termid":"PBO:0072415"}


id: PBO:0038645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 13","termid":"PBO:0038645"}


id: PBO:0073438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFI1 centrin binding protein","termid":"PBO:0073438"}


id: PBO:0090121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protease Sdd3","termid":"PBO:0090121"}


id: PBO:0065919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase subunit beta","termid":"PBO:0065919"}


id: GO:1902489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a hepatoblast.","definition_xrefs":["GOC:TermGenie","PMID:22412967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatoblast apoptotic process","synonyms":[{"name":"hepatoblast apoptosis","type":"narrow"}],"termid":"GO:1902489"}


id: SO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved hexamer about 35-bp upstream of the start point of bacterial transcription units; consensus=TTGACa or TGTTGACA. This region is associated with sigma factor 70.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma_70_element","termid":"SO:0001671"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma_ecf_element","termid":"SO:0001913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_35_signal","synonyms":[{"name":"-35 signal","type":"exact"},{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:minus_35_signal","type":"exact"},{"name":"minus 35 signal","type":"exact"}],"termid":"SO:0000176"}


id: PBO:0086978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p; whether it functions as a positive or negative regulator of Glc7p is controversial; involved in the regulation of Glc7p nuclear localization and function","termid":"PBO:0086978"}


id: PBO:0076557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 1","termid":"PBO:0076557"}


id: FYPO:0002735
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[115503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[115478,115479,115477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not proceed normally through a specific cell cycle phase. A cell cycle phase is any of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GO:0022403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":5,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"abnormal cell cycle phase","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04284","SJAG_03575","SJAG_03351","SJAG_01956"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0002735","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: GO:0072073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epithelium in the kidney over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney epithelium development","termid":"GO:0072073"}


id: GO:0048135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a group of interconnected cells derived from a single female gonial founder cell.","definition_xrefs":["GOC:jid","PMID:10370240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line cyst formation","termid":"GO:0048134"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line cyst formation","synonyms":[{"name":"female germline cyst formation","type":"exact"}],"termid":"GO:0048135"}


id: GO:1903451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of G1 to G0 transition.","definition_xrefs":["GO_REF:0000058","GOC:di","GOC:TermGenie","PMID:24088570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of G1 to G0 transition","termid":"GO:1903450"},{"relation_name":"negatively_regulates","term_name":"G1 to G0 transition","termid":"GO:0070314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of G1 to G0 transition","synonyms":[{"name":"down regulation of G1 to G0 transition","type":"exact"},{"name":"down regulation of G1/G0 transition","type":"exact"},{"name":"down regulation of cell cycle quiescence","type":"related"},{"name":"down regulation of establishment of cell quiescence","type":"exact"},{"name":"down regulation of stationary phase","type":"related"},{"name":"down-regulation of G1 to G0 transition","type":"exact"},{"name":"down-regulation of G1/G0 transition","type":"exact"},{"name":"down-regulation of cell cycle quiescence","type":"related"},{"name":"down-regulation of establishment of cell quiescence","type":"exact"},{"name":"down-regulation of stationary phase","type":"related"},{"name":"downregulation of G1 to G0 transition","type":"exact"},{"name":"downregulation of G1/G0 transition","type":"exact"},{"name":"downregulation of cell cycle quiescence","type":"related"},{"name":"downregulation of establishment of cell quiescence","type":"exact"},{"name":"downregulation of stationary phase","type":"related"},{"name":"inhibition of G1 to G0 transition","type":"narrow"},{"name":"inhibition of G1/G0 transition","type":"narrow"},{"name":"inhibition of cell cycle quiescence","type":"related"},{"name":"inhibition of establishment of cell quiescence","type":"narrow"},{"name":"inhibition of stationary phase","type":"related"},{"name":"negative regulation of G1/G0 transition","type":"exact"},{"name":"negative regulation of cell cycle quiescence","type":"related"},{"name":"negative regulation of establishment of cell quiescence","type":"exact"},{"name":"negative regulation of stationary phase","type":"related"}],"termid":"GO:1903451"}


id: GO:0008363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a chitin-based larval cuticle. The insect larval cuticle is a secretion from epidermal cells that is shed at each molt. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development involved in chitin-based cuticle molting cycle","termid":"GO:0042337"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval chitin-based cuticle development","synonyms":[{"name":"larval cuticle anabolism","type":"broad"},{"name":"larval cuticle biosynthetic process","type":"broad"},{"name":"larval cuticle formation","type":"broad"},{"name":"larval cuticle synthesis","type":"broad"}],"termid":"GO:0008363"}


id: PBO:0049906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 7","termid":"PBO:0049906"}


id: PBO:0060495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 1","termid":"PBO:0060495"}


id: FYPO:0006192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid, has no septum, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0000631","FYPO:0001312","FYPO:0005447","FYPO:0000005","FYPO:0001985","FYPO:0000257"],"is_obsolete":false,"name":"normal volume aseptate spheroid vegetative cell","synonyms":[{"name":"normal volume aseptate rounded vegetative cell","type":"exact"}],"termid":"FYPO:0006192"}


id: GO:0090657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The telomere maintenance process in which telomeric loops are disassembled to permit efficient telomere replication.","definition_xrefs":["PMID:22579284","GOC:BHF","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"telomeric loop disassembly","synonyms":[{"name":"T loop disassembly","type":"exact"},{"name":"t-loop disassembly","type":"exact"}],"termid":"GO:0090657"}


id: GO:0044062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of excretion, the elimination by an organism of the waste products that arise as a result of metabolic activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"excretion","termid":"GO:0007588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of excretion","termid":"GO:0044062"}


id: PBO:0050685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 12","termid":"PBO:0050685"}


id: GO:2001218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of S/G2 transition of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of S/G2 transition of mitotic cell cycle (obsolete GO:2001218)","synonyms":[{"name":"negative regulation of S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:2001218"}


id: PBO:0051158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-38 (non-functional)","termid":"PBO:0051158"}


id: GO:0099014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuronal dense core vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule organization","termid":"GO:0061109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal dense core vesicle organization","termid":"GO:0099014"}


id: PBO:0084352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Late endosomal protein involved in late endosome to vacuole transport; functional homolog of human obesity receptor gene-related protein (OB-RGRP)","termid":"PBO:0084352"}


id: PR:G2TRN1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1071.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRN1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1071.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.13","synonyms":[{"name":"Spom972h-SPAC1071.13","type":"exact"}],"termid":"PR:G2TRN1"}


id: PBO:0090069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Psu1","termid":"PBO:0090069"}


id: PBO:0000687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U2","termid":"PBO:0000687"}


id: PBO:0077695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNK2 antisense RNA 1","termid":"PBO:0077695"}


id: PBO:0038892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androglobin","termid":"PBO:0038892"}


id: PBO:0078573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51G","termid":"PBO:0078573"}


id: GO:1990136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linoleate + O2 = (9S,10E,12Z)-9-hydroperoxy-10,12-octadecadienoate.","definition_xrefs":["RHEA:30291","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"linoleate 9S-lipoxygenase activity","secondary_identifiers":["EC:1.13.11.58"],"synonyms":[{"name":"9-lipoxygenase activity","type":"related"},{"name":"9S-lipoxygenase activity","type":"related"},{"name":"linoleate 9-lipoxygenase activity","type":"related"},{"name":"linoleate:oxygen 9S-oxidoreductase activity","type":"exact"}],"termid":"GO:1990136"}


id: PBO:0061642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 divergent transcript","termid":"PBO:0061642"}


id: GO:0010375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process of establishing the non-random spatial arrangement of stomatal complex on the surface of a leaf. The stomatal complex is the stomatal guard cells and their associated epidermal cells.","definition_xrefs":["PMID:17259259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal complex patterning","termid":"GO:0010375"}


id: GO:0050485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which X-H and Y-H form X-Y and the acceptor is disulfide.","definition_xrefs":["EC:1.21.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor","synonyms":[{"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulphide as acceptor","type":"exact"}],"termid":"GO:0050485"}


id: GO:0061615
data:
  {"annotated_genes":["SJAG_03903","SJAG_00027","SJAG_02796","SJAG_04334","SJAG_00461","SJAG_02009","SJAG_03828","SJAG_04495","SJAG_00605","SJAG_01310","SJAG_03660","SJAG_02107","SJAG_00839","SJAG_06622","SJAG_02945","SJAG_02369","SJAG_04192","SJAG_03373","SJAG_06621","SJAG_02135"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105535,101946,112532,105532,105536,101580,100587,101582,105065,91062,101581,101947,105530,105533,94351,105531,94071,90571,105067,105069,105070,105066,105534,105068,99498,105071,99760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a monosaccharide into pyruvate, occurring through a fructose-6-phosphate intermediate, with the concomitant production of ATP and NADH.","definition_xrefs":["GOC:dph","ISBN:0201090910","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycolytic process through fructose-6-phosphate","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5484"],"synonyms":[{"name":"glycolysis through fructose-6-phosphate","type":"exact"}],"termid":"GO:0061615","terms_by_termid":{"GO:0061621":null}}


id: GO:0002331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Expression of a single heavy chain allele during pre-B cell differentiation.","definition_xrefs":["GOC:add","GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"part_of","term_name":"pre-B cell differentiation","termid":"GO:0002329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"pre-B cell allelic exclusion","synonyms":[{"name":"pre-B lymphocyte allelic exclusion","type":"exact"}],"termid":"GO:0002331"}


id: GO:0008361
data:
  {"annotated_genes":["SJAG_02019","SJAG_04332","SJAG_03401","SJAG_02532","SJAG_01805","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90591],"is_not":false,"summary":null,"term":"GO:0008361"},{"annotations":[91741,101821,110091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006884"},{"annotations":[88429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"},{"annotations":[89843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045793"}]},"cv_name":"biological_process","definition":"Any process that modulates the size of a cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01805":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_03401":null,"SJAG_04332":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell size","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell size control","type":"exact"}],"termid":"GO:0008361","terms_by_termid":{"GO:0006884":null,"GO:0008361":null,"GO:0009992":null,"GO:0045793":null}}


id: GO:0090016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leaflet formation.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leaf morphogenesis","termid":"GO:1901371"},{"relation_name":"regulates","term_name":"leaflet formation","termid":"GO:0090014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leaflet formation","termid":"GO:0090016"}


id: PBO:0077454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 4","termid":"PBO:0077454"}


id: PBO:0027372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_disulfide_oxidoreductase_activity","termid":"PBO:0027372"}


id: PBO:0088700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin activating enzyme E1 Uba1","termid":"PBO:0088700"}


id: PBO:0082551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central kinetochore associated protein; mediates mitotic progression; interacts with several central kinetochore proteins and centromeric histone Cse4p; role in resistance to oxidative stress; similar to Slk19p; YBP2 has a paralog, YBP1, that arose from the whole genome duplication","termid":"PBO:0082551"}


id: PR:O74309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slm9 gene.","definition_xrefs":["UniProtKB:O74309","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone transcription regulator slm9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.03","synonyms":[{"name":"Spom972h-slm9","type":"exact"}],"termid":"PR:O74309"}


id: PBO:0048841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceronephosphate O-acyltransferase","termid":"PBO:0048841"}


id: PBO:0066815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 114","termid":"PBO:0066815"}


id: GO:0009196
data:
  {"annotated_genes":["SJAG_04665","SJAG_04657","SJAG_02874","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88462,91542,103394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[114208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[114210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine deoxynucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate metabolic process","termid":"GO:0009138"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009186"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009196","terms_by_termid":{"GO:0006227":null,"GO:0006233":null,"GO:0006240":null}}


id: PBO:0040223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATE1 opposite strand, pseudogene","termid":"PBO:0040223"}


id: PR:O14195
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56E4.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C56E4.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.07","synonyms":[{"name":"Spom972h-SPAC56E4.07","type":"exact"}],"termid":"PR:O14195"}


id: GO:0080152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductive pentose-phosphate cycle.","definition_xrefs":["PMID:17031544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, dark reaction","termid":"GO:0010110"},{"relation_name":"regulates","term_name":"reductive pentose-phosphate cycle","termid":"GO:0019253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of reductive pentose-phosphate cycle","synonyms":[{"name":"regulation of C3 photosynthesis","type":"narrow"},{"name":"regulation of Calvin cycle","type":"narrow"}],"termid":"GO:0080152"}


id: GO:0160104
data:
  {"annotated_genes":["SJAG_00886"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103406],"is_not":false,"summary":null,"term":"GO:0160104"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction:guanosine(26) in tRNA + 2 S-adenosyl-L-methionine = 2 H+ + N(2)-dimethylguanosine(26) in tRNA + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00886":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0140098","GO:0016740","GO:0003824","GO:0140101"],"is_obsolete":false,"name":"tRNA (guanine(26)-N2)-dimethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6782416","RHEA:43140"],"synonyms":[{"name":"tRNA (guanine(26)-N(2))-dimethyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(26)-N(2))-dimethyltransferase activity","type":"exact"},{"name":"tRNA (m(2)2G26)dimethyltransferase","type":"exact"}],"termid":"GO:0160104","terms_by_termid":{"GO:0160104":null}}


id: PBO:0040835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BST2 interferon stimulated positive regulator","termid":"PBO:0040835"}


id: PBO:0028876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_M26_site","termid":"PBO:0028876"}


id: _global:instance_of
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"instance_of","termid":"_global:instance_of"}


id: PR:Q2EEM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.12 gene.","definition_xrefs":["UniProtKB:Q2EEM0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.12","synonyms":[{"name":"Spom972h-SPAC27E2.12","type":"exact"}],"termid":"PR:Q2EEM0"}


id: GO:0003319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cardioblast toward the midline that contributes to the initial appearance of the heart rudiment.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration to the midline involved in heart development","termid":"GO:0003318"},{"relation_name":"part_of","term_name":"heart rudiment formation","termid":"GO:0003315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast migration to the midline involved in heart rudiment formation","termid":"GO:0003319"}


id: PBO:0050817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 2","termid":"PBO:0050817"}


id: PATO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male fertility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male fertile","termid":"PATO:0000891"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased male fertility","synonyms":[{"name":"high male fertility","type":"exact"}],"termid":"PATO:0001832"}


id: GO:0007517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.","definition_xrefs":["GOC:jid","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle organ development","termid":"GO:0007517"}


id: SO:1001287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding signal that is found many hundreds of nucleotides 3' of a redefined stop codon.","direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distant_three_prime_recoding_signal","synonyms":[{"name":"distant three prime recoding signal","type":"exact"}],"termid":"SO:1001287"}


id: PBO:0080068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 33","termid":"PBO:0080068"}


id: PR:O74763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DDB1- and CUL4-associated factor 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C17D11.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.08","secondary_identifiers":["UniProtKB:O74763"],"synonyms":[{"name":"Spom972h-DCAF7","type":"exact"}],"termid":"PR:O74763"}


id: PR:O94340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C1271.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.07c","synonyms":[{"name":"Spom972h-SPBC1271.07c","type":"exact"}],"termid":"PR:O94340"}


id: GO:0071321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cGMP (cyclic GMP, guanosine 3',5'-cyclophosphate) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cGMP","termid":"GO:0070305"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cGMP","synonyms":[{"name":"cellular response to 3',5' cGMP","type":"exact"},{"name":"cellular response to 3',5'-cGMP","type":"exact"},{"name":"cellular response to cyclic GMP","type":"exact"},{"name":"cellular response to guanosine 3',5'-cyclophosphate","type":"exact"}],"termid":"GO:0071321"}


id: PBO:0028830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_localization","termid":"PBO:0028830"}


id: PBO:0068092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 399","termid":"PBO:0068092"}


id: PBO:0110047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phospholipid scramblase Pls1","termid":"PBO:0110047"}


id: PBO:0087171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II second largest subunit B150; part of central core; similar to bacterial beta subunit","termid":"PBO:0087171"}


id: GO:0044337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the positive regulation of apoptotic process.","definition_xrefs":["GOC:BHF","GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"},{"relation_name":"part_of","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"canonical Wnt signaling pathway involved in positive regulation of apoptotic process","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of apoptosis","type":"narrow"},{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of apoptotic process","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of apoptosis","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of apoptotic process","type":"exact"}],"termid":"GO:0044337"}


id: GO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When methionine is used as the substrate, 3-methylthiopropanoate is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"methionine catabolic process","termid":"GO:0009087"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0006790","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"methionine catabolic process to 3-methylthiopropanoate","termid":"GO:0000954"}


id: PBO:0113066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone acetyltransferase complex; associates with and protects nucleosome-free regions of the genome including rDNA, tDNA and telomeric loci, contributing to genome integrity","termid":"PBO:0113066"}


id: PBO:0089623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Sec65","termid":"PBO:0089623"}


id: PBO:0070980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 4","termid":"PBO:0070980"}


id: GO:0008197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete yolk protein (obsolete GO:0008197)","synonyms":[{"name":"yolk protein","type":"exact"}],"termid":"GO:0008197"}


id: PBO:0067897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 199","termid":"PBO:0067897"}


id: PATO:0001676
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An efficiency which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"efficient","termid":"PATO:0001678"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased efficiency","synonyms":[{"name":"high efficiency","type":"exact"}],"termid":"PATO:0001676"}


id: GO:0015710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tellurite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tellurite transport","termid":"GO:0015710"}


id: FYPO:0000844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mercaptoethanol. Cells stop growing (and may die) at a concentration of mercaptoethanol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to mercaptoethanol","synonyms":[{"name":"hypersensitive to mercaptoethanol","type":"exact"},{"name":"sensitive to 2-sulfanylethanol","type":"exact"},{"name":"sensitive to mercaptoethanol during mitotic cell cycle","type":"related"},{"name":"sensitive to mercaptoethanol during vegetative growth","type":"exact"}],"termid":"FYPO:0000844"}


id: PBO:0031603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_S_phase","termid":"PBO:0031603"}


id: FYECO:0000005
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01680:allele-2":{"allele_type":"amino_acid_mutation","description":"P470L","gene_uniquename":"SJAG_01680","name":"chk1-P470L","synonyms":[{"name":"chk1- 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coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02668:allele-1":{"allele_type":"amino_acid_mutation","description":"R77W","gene_uniquename":"SJAG_02668","name":"mpe1-R77W","uniquename":"SJAG_02668:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_02860:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02860","name":"wcs1delta","uniquename":"SJAG_02860:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03118:allele-2":{"allele_type":"nonsense_mutation","description":"aa61->stop","gene_uniquename":"SJAG_03118","name":"frameshift","uniquename":"SJAG_03118:allele-2"},"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"},"SJAG_03916:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03916","name":"chp1delta","uniquename":"SJAG_03916:allele-1"},"SJAG_03920:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03920","name":"sdh3delta","uniquename":"SJAG_03920:allele-1"},"SJAG_04061:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04061","name":"arb2delta","uniquename":"SJAG_04061:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_04843:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04843","name":"fum1delta","uniquename":"SJAG_04843:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"},"SJAG_05242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05242","name":"wcs2delta","uniquename":"SJAG_05242:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115376,115377,115378,115382,115383,115384,115621,115400,115551,115552,115339,115340,115558,115771,115716,115549,115550,115554,115388,115389,115545,115653,115675,115759,115773,115379,115380,115381,115385,115386,115387,115644,115645,115646,115580,115581,115588,115591,115592,115710,115715,115544,115560,115391,115405,115406,115407,115408,115776,115777,115778,115337,115338,115413,115415,115575,115576,115586,115390,115765,115768,115414,115416,115504,115541,115548,115760,115761,115762,115585,115540,115543,115587,115711,115555,115553,115375,115769,115770,115546,115547,115775,115709,115402,115503,115708,115579,115590,115527,115403,115393,115394,115395,115396,115397,115398,115399,115409,115410,115392,115642,115774,115556,115557,115559,115589,115404,115712],"is_not":false,"summary":null,"term":"FYECO:0000005"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was performed, or cells were grown in a temperature typically in the range between 25+32 degrees Celsius.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental 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id: GO:0022404
data:
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id: PBO:0031433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_organization","termid":"PBO:0031433"}


id: PBO:0065166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein interacting with cyclin A1","termid":"PBO:0065166"}


id: GO:0035687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a T-helper 1 cell from the blood vessels into the surrounding tissue. A T-helper 1 cell is a CD4-positive, alpha-beta T cell that has the phenotype T-bet-positive and produces interferon-gamma.","definition_xrefs":["GOC:BHF","CL:0000545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helper T cell extravasation","termid":"GO:0035684"},{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell extravasation","synonyms":[{"name":"Th1 cell extravasation","type":"exact"}],"termid":"GO:0035687"}


id: GO:0006750
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id: PBO:0067627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 799, pseudogene","termid":"PBO:0067627"}


id: PBO:0052344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 2A","termid":"PBO:0052344"}


id: GO:1902752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of renal amino acid absorption.","definition_xrefs":["GO_REF:0000058","GOC:hjd","GOC:TermGenie","PMID:1526373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal amino acid absorption","termid":"GO:1990297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of renal amino acid absorption","termid":"GO:1902752"}


id: PR:O74914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3101 gene.","definition_xrefs":["UniProtKB:O74914","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3101 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.03c","synonyms":[{"name":"Spom972h-hsp3101","type":"exact"},{"name":"glyoxalase 3 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74914"}


id: GO:0032570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to steroid hormone","termid":"GO:0048545"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to progesterone","synonyms":[{"name":"response to progesterone stimulus","type":"exact"}],"termid":"GO:0032570"}


id: FYPO:0009033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of dihydrocoumarin than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to dihydrocoumarin","synonyms":[{"name":"resistance to dihydrocoumarin during mitotic cell cycle","type":"related"},{"name":"resistance to dihydrocoumarin during vegetative growth","type":"exact"},{"name":"resistant to dihydrocoumarin","type":"exact"}],"termid":"FYPO:0009033"}


id: GO:0102504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: luteolinidin + UDP-alpha-D-glucose = luteolinidin 5-O-glucoside + UDP + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete luteolinidin 5-O-glucosyltransferase activity (obsolete GO:0102504)","termid":"GO:0102504"}


id: PBO:0089449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Mca1","termid":"PBO:0089449"}


id: PBO:0087847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Topoisomerase II; relieves torsional strain in DNA by cleaving and re-sealing phosphodiester backbone of both positively and negatively supercoiled DNA; cleaves complementary strands; localizes to axial cores in meiosis; required for replication slow zone (RSZ) breakage following Mec1p inactivation; human homolog TOP2A implicated in cancers, and can complement yeast null mutant","termid":"PBO:0087847"}


id: PBO:0060212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multivesicular body subunit 12B","termid":"PBO:0060212"}


id: GO:0046534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of photoreceptor cell differentiation","termid":"GO:0046532"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of photoreceptor cell differentiation","secondary_identifiers":["GO:0045675"],"synonyms":[{"name":"activation of photoreceptor cell differentiation","type":"narrow"},{"name":"activation of photoreceptor differentiation","type":"narrow"},{"name":"positive regulation of photoreceptor differentiation","type":"exact"},{"name":"stimulation of photoreceptor cell differentiation","type":"narrow"},{"name":"stimulation of photoreceptor differentiation","type":"narrow"},{"name":"up regulation of photoreceptor cell differentiation","type":"exact"},{"name":"up regulation of photoreceptor differentiation","type":"exact"},{"name":"up-regulation of photoreceptor cell differentiation","type":"exact"},{"name":"up-regulation of photoreceptor differentiation","type":"exact"},{"name":"upregulation of photoreceptor cell differentiation","type":"exact"},{"name":"upregulation of photoreceptor differentiation","type":"exact"}],"termid":"GO:0046534"}


id: GO:0042595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of deprivation of nourishment.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to starvation","synonyms":[{"name":"behavioural response to starvation","type":"exact"}],"termid":"GO:0042595"}


id: PBO:0039941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 3B","termid":"PBO:0039941"}


id: PBO:0082068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methylbutanal reductase and NADPH-dependent methylglyoxal reductase; stress induced (osmotic, ionic, oxidative, heat shock and heavy metals); regulated by the HOG pathway; restores resistance to glycolaldehyde by coupling reduction of glycolaldehyde to ethylene glycol and oxidation of NADPH to NADP+; protein abundance increases in response to DNA replication stress; methylglyoxal reductase (NADPH-dependent) is also known as D-lactaldehyde dehydrogenase","termid":"PBO:0082068"}


id: GO:0071427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains messenger RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071427)","synonyms":[{"name":"mRNA-containing RNP export from nucleus","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071427"}


id: GO:0160077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a single lipid droplet is created from the fusion of two or more lipid droplets.","definition_xrefs":["PMID:34508658","PMID:36477540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet organization","termid":"GO:0034389"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid droplet fusion","termid":"GO:0160077"}


id: GO:0006714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sesquiterpenoid compounds, terpenoids with three isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sesquiterpenoid metabolic process","synonyms":[{"name":"sesquiterpenoid metabolism","type":"exact"}],"termid":"GO:0006714"}


id: PBO:0073364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family H member 1","termid":"PBO:0073364"}


id: RO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in catabolism of c if and only if p is a catabolic process, and the execution of p results in c being broken into smaller parts with energy being released.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_breakdown_of","termid":"RO:0002586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_catabolism_of","termid":"RO:0002589"}


id: FYPO:0002794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the number, distribution, or morphology of all or part of the vacuole(s) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuole","synonyms":[{"name":"abnormal vacuole physical object quality","type":"exact"},{"name":"abnormal vacuoles","type":"exact"}],"termid":"FYPO:0002794"}


id: PBO:0070851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 4","termid":"PBO:0070851"}


id: GO:0036236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an substrate by the conjugation of glucuronic acid to form an acyl-glucuronide (also called an acyl-glucuronoside).","definition_xrefs":["PMID:12485951","PMID:22294686","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular glucuronidation","termid":"GO:0052695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"acyl glucuronidation","termid":"GO:0036236"}


id: FYPO:0005469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and eventually lyses.","definition_xrefs":["PMID:8978670","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, lysed cell","synonyms":[{"name":"inviable after spore germination, undivided lysed cell","type":"exact"},{"name":"inviable following spore germination, without cell division, with cell lysis","type":"exact"},{"name":"inviable germinated spore, without cell division, with cell lysis","type":"exact"},{"name":"lethal after spore germination, without cell division, with cell lysis","type":"exact"}],"termid":"FYPO:0005469"}


id: GO:0043951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which stops, prevents, or reduces the frequency, rate or extent of cAMP-mediated signaling.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cAMP-mediated signaling","termid":"GO:0043949"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cAMP-mediated signaling","termid":"GO:0019933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cAMP-mediated signaling","synonyms":[{"name":"negative regulation of cAMP-mediated signalling","type":"exact"}],"termid":"GO:0043951"}


id: PBO:0087582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); APC/C is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the platform domain of the APC/C, based on structural analysis; relative distribution to nuclear foci decreases upon DNA replication stress","termid":"PBO:0087582"}


id: GO:2001115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a methanopterin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanopterin-containing compound metabolic process","synonyms":[{"name":"methanopterin metabolism","type":"exact"}],"termid":"GO:2001115"}


id: PBO:0049172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosaminoglycan regulatory associated long non-coding RNA","termid":"PBO:0049172"}


id: GO:1904745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an Atg1/UKL1 kinase complex.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:25139988","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"Atg1/ULK1 kinase complex assembly","synonyms":[{"name":"ATG1 kinase complex assembly","type":"exact"},{"name":"ATG1 kinase complex formation","type":"exact"},{"name":"ATG1-ATG13 complex assembly","type":"exact"},{"name":"ATG1-ATG13 complex formation","type":"exact"},{"name":"ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"Atg1p signalling complex assembly","type":"exact"},{"name":"Atg1p signalling complex formation","type":"exact"},{"name":"ULK1 signaling complex assembly","type":"exact"},{"name":"ULK1 signaling complex formation","type":"exact"},{"name":"ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"ULK1-ATG13-RB1CC1 complex formation","type":"exact"}],"termid":"GO:1904745"}


id: PBO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Vip1","termid":"PBO:0000846"}


id: GO:0102217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: n ATP + n H2O + a 6-phosphogluco-maltodextrin = n AMP + n hydrogenphosphate + a poly-6-phosphogluco-maltodextrin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-phosphoglucan, water dikinase activity (obsolete GO:0102217)","termid":"GO:0102217"}


id: PBO:0086621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0086621"}


id: GO:1900648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chanoclavine-I aldehyde biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900646"},{"relation_name":"is_a","term_name":"positive regulation of ergot alkaloid biosynthetic process","termid":"GO:1900824"},{"relation_name":"positively_regulates","term_name":"chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of chanoclavine-I aldehyde biosynthetic process","synonyms":[{"name":"activation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"activation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"activation of chanoclavine-I aldehyde biosynthetic process","type":"narrow"},{"name":"activation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"activation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde synthesis","type":"exact"}],"termid":"GO:1900648"}


id: GO:0016171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cell surface antigen (obsolete GO:0016171)","synonyms":[{"name":"cell surface antigen","type":"exact"}],"termid":"GO:0016171"}


id: PBO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClC chloride channel (predicted)","termid":"PBO:0004232"}


id: PBO:0046409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPCAM divergent transcript","termid":"PBO:0046409"}


id: PBO:0056865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated monooxygenase, calponin and LIM domain containing 1","termid":"PBO:0056865"}


id: PBO:0034035
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_authors","termid":"PBO:0034035"}


id: GO:0180024
data:
  {"annotated_genes":["SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99855],"is_not":false,"summary":null,"term":"GO:0180024"}]},"cv_name":"molecular_function","definition":"An activity in which a protein, or group of proteins, acts to restrict the size of a fenestration in a membrane or membrane system (i.e. restrict the diameter of a hole in a membrane). An example of this is the molecular function is performed by ESCRT-III proteins at the nuclear envelope of fission yeast during anaphase B.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"membrane grommet activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180024","terms_by_termid":{"GO:0180024":null}}


id: PR:P05511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPMIT.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized 91 kDa protein in cob intron (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.06","synonyms":[{"name":"Spom972h-SPMIT.06","type":"exact"}],"termid":"PR:P05511"}


id: PBO:0063345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEST containing nuclear protein pseudogene 5","termid":"PBO:0063345"}


id: PBO:0027120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_azygotic_meiosis_I","termid":"PBO:0027120"}


id: PBO:0059310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51 pseudogene 1","termid":"PBO:0059310"}


id: PBO:0055822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lecithin retinol acyltransferase","termid":"PBO:0055822"}


id: PBO:0068520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 115, pseudogene","termid":"PBO:0068520"}


id: PR:Q10227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2E12.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2E12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E12.03c","synonyms":[{"name":"Spom972h-SPAC2E12.03c","type":"exact"}],"termid":"PR:Q10227"}


id: PBO:0060659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural cytotoxicity triggering receptor 3","termid":"PBO:0060659"}


id: GO:0032986
data:
  {"annotated_genes":["SJAG_01653","SJAG_02314","SJAG_04038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93157,86097,113089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"}]},"cv_name":"biological_process","definition":"The disaggregation of a protein-DNA complex into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"is_a","term_name":"protein-DNA complex organization","termid":"GO:0071824"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01653":null,"SJAG_02314":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA complex disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-protein complex disassembly","type":"exact"}],"termid":"GO:0032986","terms_by_termid":{"GO:0006337":null}}


id: PBO:0056681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2D","termid":"PBO:0056681"}


id: SO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron that is the most 5-prime in a given transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_intron","synonyms":[{"name":"5' intron","type":"exact"},{"name":"5' intron sequence","type":"exact"},{"name":"five prime intron","type":"exact"}],"termid":"SO:0000190"}


id: PATO:0000294
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000294 process value (obsolete PATO:0000294)","termid":"PATO:0000294"}


id: GO:1901483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription factor catabolic process.","definition_xrefs":["GOC:al","GOC:TermGenie","GOC:vw","PMID:22833559"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription factor catabolic process (obsolete GO:1901483)","synonyms":[{"name":"regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"regulation of transcription factor breakdown","type":"exact"},{"name":"regulation of transcription factor catabolism","type":"exact"},{"name":"regulation of transcription factor degradation","type":"exact"}],"termid":"GO:1901483"}


id: PATO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A distance which is greater relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"distance","termid":"PATO:0000040"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased distance","synonyms":[{"name":"long distance","type":"related"}],"termid":"PATO:0000374"}


id: SO:0001841
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene in the reference genome, though known to be intact in the genomes of other individuals of the same species. The annotation process has confirmed that the pseudogenisation event is not a genomic sequencing error.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","JAX:hd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene","termid":"SO:0000336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_pseudogene","synonyms":[{"name":"polymorphic psuedogene","type":"exact"}],"termid":"SO:0001841"}


id: GO:0006680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylceramide metabolic process","termid":"GO:0006678"},{"relation_name":"is_a","term_name":"glycosylceramide catabolic process","termid":"GO:0046477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"glucosylceramide catabolic process","synonyms":[{"name":"glucosylceramide breakdown","type":"exact"},{"name":"glucosylceramide catabolism","type":"exact"},{"name":"glucosylceramide degradation","type":"exact"}],"termid":"GO:0006680"}


id: PBO:0054771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2183","termid":"PBO:0054771"}


id: PBO:0046122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E pseudogene 1","termid":"PBO:0046122"}


id: PBO:0043111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHUK divergent transcript","termid":"PBO:0043111"}


id: MOD:00922
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cy3 CyDye DIGE Fluor saturation dye","synonyms":[{"name":"Cy3 CyDye DIGE Fluor saturation dye","type":"related"},{"name":"CyDye-Cy3","type":"related"}],"termid":"MOD:00922"}


id: PATO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having smaller branches arising from larger branches. Resembling a tree in branching structure.","definition_xrefs":["PATOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendritic","synonyms":[{"name":"dendriform","type":"exact"},{"name":"dendroid","type":"exact"},{"name":"dendroidal","type":"exact"}],"termid":"PATO:0002045"}


id: GO:0039004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the pronephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of pronephric tubule identity","termid":"GO:0039005"},{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in pronephric nephron development","termid":"GO:0072196"},{"relation_name":"part_of","term_name":"pronephric proximal tubule morphogenesis","termid":"GO:0039011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric proximal tubule identity","termid":"GO:0039004"}


id: PBO:0044798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 11, pseudogene","termid":"PBO:0044798"}


id: PR:000050400
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-75 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75, MOD:00047.","definition_xrefs":["PRO:DAN","PMID:23333317","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein cut12 phosphorylated 2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"Spom-cut12/Phos:2","type":"exact"},{"name":"UniProtKB:O59755, Thr-75, MOD:00047","type":"narrow"}],"termid":"PR:000050400"}


id: PBO:0048767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glia maturation factor beta","termid":"PBO:0048767"}


id: GO:0016150
data:
  {"annotated_genes":["SJAG_05221"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94738],"is_not":false,"summary":null,"term":"GO:0016150"}]},"cv_name":"molecular_function","definition":"A translation release factor that is not specific to particular codons; binds to guanine nucleotides.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation release factor activity","termid":"GO:0003747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0045182","GO:0003674"],"is_obsolete":false,"name":"translation release factor activity, codon nonspecific","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016150","terms_by_termid":{"GO:0016150":null}}


id: PBO:0047501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXF1 adjacent non-coding developmental regulatory RNA","termid":"PBO:0047501"}


id: GO:0070122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of an isopeptide bond. An isopeptide bond is an amide linkage between a carboxyl group of one amino acid and an amino group of another amino acid in which at least one of these groups is not on the a-carbon of one of the amino acids (for example, the link between an epsilon-amino group of a lysine molecule to a carboxyl group on a second amino acid is an isopeptide bond).","definition_xrefs":["Wikipedia:Isopeptidase","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete isopeptidase activity (obsolete GO:0070122)","termid":"GO:0070122"}


id: PBO:0087522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of holo-CPF; holo-CPF is a multiprotein complex and functional homolog of mammalian CPSF, required for the cleavage and polyadenylation of mRNA and snoRNA 3' ends; involved in pre-tRNA processing; binds to the phosphorylated CTD of RNAPII","termid":"PBO:0087522"}


id: PBO:0045987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 1","termid":"PBO:0045987"}


id: PBO:0058022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3972","termid":"PBO:0058022"}


id: GO:1901713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of urea catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide catabolic process","termid":"GO:0034252"},{"relation_name":"is_a","term_name":"regulation of urea catabolic process","termid":"GO:0034254"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of nitrogen cycle metabolic process","termid":"GO:1903315"},{"relation_name":"negatively_regulates","term_name":"urea catabolic process","termid":"GO:0043419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0044281","GO:0071941","GO:0008150"],"is_obsolete":false,"name":"negative regulation of urea catabolic process","synonyms":[{"name":"down regulation of urea breakdown","type":"exact"},{"name":"down regulation of urea catabolic process","type":"exact"},{"name":"down regulation of urea catabolism","type":"exact"},{"name":"down regulation of urea decomposition","type":"exact"},{"name":"down regulation of urea degradation","type":"exact"},{"name":"down-regulation of urea breakdown","type":"exact"},{"name":"down-regulation of urea catabolic process","type":"exact"},{"name":"down-regulation of urea catabolism","type":"exact"},{"name":"down-regulation of urea decomposition","type":"exact"},{"name":"down-regulation of urea degradation","type":"exact"},{"name":"downregulation of urea breakdown","type":"exact"},{"name":"downregulation of urea catabolic process","type":"exact"},{"name":"downregulation of urea catabolism","type":"exact"},{"name":"downregulation of urea decomposition","type":"exact"},{"name":"downregulation of urea degradation","type":"exact"},{"name":"inhibition of urea breakdown","type":"exact"},{"name":"inhibition of urea catabolic process","type":"narrow"},{"name":"inhibition of urea catabolism","type":"exact"},{"name":"inhibition of urea decomposition","type":"exact"},{"name":"inhibition of urea degradation","type":"exact"},{"name":"negative regulation of urea breakdown","type":"exact"},{"name":"negative regulation of urea catabolism","type":"exact"},{"name":"negative regulation of urea decomposition","type":"exact"},{"name":"negative regulation of urea degradation","type":"exact"}],"termid":"GO:1901713"}


id: PBO:0039192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"akirin 2","termid":"PBO:0039192"}


id: PBO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insulinase Related Protease","termid":"PBO:0016937"}


id: PBO:0054412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1808","termid":"PBO:0054412"}


id: PBO:0089388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S8","termid":"PBO:0089388"}


id: GO:1905245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aspartic-type peptidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:jl","PMID:21745575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aspartic-type peptidase activity","termid":"GO:1905245"}


id: PR:Q10339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12542:SF7","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo70 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.20","secondary_identifiers":["UniProtKB:Q10339"],"synonyms":[{"name":"SPBC106.20","type":"related"},{"name":"Spom972h-EXOC7","type":"exact"}],"termid":"PR:Q10339"}


id: PBO:0059626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCH1 pseudogene 1","termid":"PBO:0059626"}


id: PBO:0005034
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.8.1.6","termid":"PBO:0005034"}


id: PBO:0114536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3818 and PXA domain conserved fungal protein, implicated in lipid metabolism/ membrane organization or vesicle-mediated transport","termid":"PBO:0114536"}


id: PBO:0089337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi to ER retrograde transport protein","termid":"PBO:0089337"}


id: GO:0046847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.","definition_xrefs":["GOC:mah","GOC:tb","PMID:18464790","GOC:dph","PMID:16337369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"filopodium assembly","synonyms":[{"name":"filopodia biosynthesis","type":"related"},{"name":"filopodia formation","type":"related"},{"name":"filopodium formation","type":"related"}],"termid":"GO:0046847"}


id: PATO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition not to progress, invade surrounding tissues or metastasize.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, non-malignant","synonyms":[{"name":"benign","type":"related"}],"termid":"PATO:0002096"}


id: PBO:0052341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 1B","termid":"PBO:0052341"}


id: GO:0015514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrite transmembrane transporter activity","termid":"GO:0015113"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nitrite efflux transmembrane transporter activity","synonyms":[{"name":"nitrite extrusion permease activity","type":"exact"}],"termid":"GO:0015514"}


id: GO:0032200
data:
  {"annotated_genes":["SJAG_00640","SJAG_01068","SJAG_01378","SJAG_01601","SJAG_02116","SJAG_02401","SJAG_01377","SJAG_02362","SJAG_01777","SJAG_00559","SJAG_00939","SJAG_01410","SJAG_04245","SJAG_03128","SJAG_01677","SJAG_03722","SJAG_00676","SJAG_05979","SJAG_04863","SJAG_02778","SJAG_02212","SJAG_01864","SJAG_00756","SJAG_01263","SJAG_03685","SJAG_02079","SJAG_01605","SJAG_02621","SJAG_01675","SJAG_05372","SJAG_05353","SJAG_02119","SJAG_04150","SJAG_04183","SJAG_00429","SJAG_04586","SJAG_00364","SJAG_03855","SJAG_03092","SJAG_05173","SJAG_04372","SJAG_04186","SJAG_03780","SJAG_03624","SJAG_00934","SJAG_02576","SJAG_02771","SJAG_02409","SJAG_03982","SJAG_03916","SJAG_03843","SJAG_03680","SJAG_03720","SJAG_01540","SJAG_04039","SJAG_06642","SJAG_02194","SJAG_03844","SJAG_03026","SJAG_03997","SJAG_04574","SJAG_01832","SJAG_04266","SJAG_01579","SJAG_05373","SJAG_06597","SJAG_05105","SJAG_02563"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87862,102077],"is_not":false,"summary":null,"term":"GO:0032200"},{"annotations":[93260],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032215"},{"annotations":[101225,85799],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031848"},{"annotations":[91137],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[88100,104303,113889,106636,109463,100315,108268,90128,86086,95218,107424,100218,87298,109839,86244,110162,115002,92802,114280,84464,99342,94340],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031509"},{"annotations":[91138,87859,95810,101226,106515,112121,85800,110774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016233"},{"annotations":[107687,104070,85205,112418,91139,95811,106516,95152,107890,112122,87457,100280,103896,84584,105520,113039,107709,96949,92240,102742,105696,102076,107889,110453,112439,108681,108990,87860,101227,107095,102264,85801,95278,85155,88555,95819,104174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000723"},{"annotations":[107891,88754,109106,109107,85206,109108,88756,88755,109109,109110,92241,88757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"},{"annotations":[85207,86669,107710,104071,109994,95812,112123,86670,104258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"},{"annotations":[87861,101228,102265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010833"},{"annotations":[104259,95813,112124],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905324"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of telomeres, terminal regions of a linear chromosome that include the telomeric DNA repeats and associated proteins.","definition_xrefs":["GOC:jl","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 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id: PBO:0064744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 80","termid":"PBO:0064744"}


id: PBO:0065074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 antisense RNA 3","termid":"PBO:0065074"}


id: PBO:0045211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C5 beta","termid":"PBO:0045211"}


id: _global:translates_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Inverse of translation _of.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translates_to","termid":"_global:translates_to"}


id: PBO:0053558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 566","termid":"PBO:0053558"}


id: GO:1903184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-dopa.","definition_xrefs":["PMID:8822146","GOC:PARL","GO_REF:0000068","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-dopa metabolic process","synonyms":[{"name":"L-dopa metabolism","type":"exact"}],"termid":"GO:1903184"}


id: GO:0160122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an corneal epithelial cell, any of the cells making up an corneal epithelium.","definition_xrefs":["PMID:33414365","PMID:32697979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corneal epithelial cell differentiation","termid":"GO:0160122"}


id: PBO:0027335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pre-replicative_complex_assembly","termid":"PBO:0027335"}


id: FYPO:0006560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic interphase","termid":"FYPO:0003331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic G1 phase","synonyms":[{"name":"reduced protein kinase activity during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006560"}


id: GO:0015003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing entity that serves as an electron acceptor and electron donor in an electron transport system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete copper electron carrier (obsolete GO:0015003)","synonyms":[{"name":"copper electron carrier","type":"exact"}],"termid":"GO:0015003"}


id: PBO:0070083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 40, pseudogene","termid":"PBO:0070083"}


id: PBO:0070981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 5","termid":"PBO:0070981"}


id: PBO:0060385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYT1L antisense RNA 1","termid":"PBO:0060385"}


id: PBO:0070072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 29, pseudogene","termid":"PBO:0070072"}


id: PBO:0057267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 492","termid":"PBO:0057267"}


id: SO:0001748
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL3 RNA leader sequence to the 5' end of an mRNA. SL3 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL3_acceptor_site","synonyms":[{"name":"SL3 acceptor site","type":"exact"}],"termid":"SO:0001748"}


id: PR:Q10304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.11c","synonyms":[{"name":"Spom972h-SPAC22H10.11c","type":"exact"}],"termid":"PR:Q10304"}


id: PBO:0065743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-phosphoxylose phosphatase 1","termid":"PBO:0065743"}


id: PBO:0062358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily R member 2 pseudogene","termid":"PBO:0062358"}


id: PATO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000202 long term memory (obsolete PATO:0000202)","termid":"PATO:0000202"}


id: PBO:0055098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2516","termid":"PBO:0055098"}


id: PBO:0067819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 121","termid":"PBO:0067819"}


id: PBO:0059579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTA1 divergent transcript","termid":"PBO:0059579"}


id: PBO:0059251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L20","termid":"PBO:0059251"}


id: GO:0008158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a member of the hedgehog protein family and transmitting the signal across the membrane to initiate a change in cell activity.","definition_xrefs":["PMID:9278137","GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"hedgehog receptor activity","synonyms":[{"name":"patched activity","type":"exact"}],"termid":"GO:0008158"}


id: FYPO:0000559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of re-entry into the mitotic cell cycle after pheromone arrest is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal re-entry into mitotic cell cycle after pheromone arrest","termid":"FYPO:0000555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased rate of re-entry into mitotic cell cycle after pheromone arrest","synonyms":[{"name":"increased rate of recovery from pheromone-induced cell cycle arrest","type":"exact"},{"name":"recovery from pheromone-induced cell cycle arrest: increased rate","type":"related"}],"termid":"FYPO:0000559"}


id: PBO:0076420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9 pseudogene 1","termid":"PBO:0076420"}


id: PBO:0065349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked","termid":"PBO:0065349"}


id: PATO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000232 taste (obsolete PATO:0000232)","termid":"PATO:0000232"}


id: GO:0031799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 2 metabotropic glutamate receptor binding","synonyms":[{"name":"type 2 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031799"}


id: PBO:0063259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 5","termid":"PBO:0063259"}


id: PBO:0053669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 850","termid":"PBO:0053669"}


id: PBO:0046077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 2","termid":"PBO:0046077"}


id: GO:1905127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of axo-dendritic protein transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20694152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"regulation of axo-dendritic protein transport","termid":"GO:1905126"},{"relation_name":"negatively_regulates","term_name":"axo-dendritic protein transport","termid":"GO:0099640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of axo-dendritic protein transport","synonyms":[{"name":"down regulation of axo-dendritic protein transport","type":"exact"},{"name":"down regulation of axonal protein transport","type":"narrow"},{"name":"down-regulation of axo-dendritic protein transport","type":"exact"},{"name":"down-regulation of axonal protein transport","type":"narrow"},{"name":"downregulation of axo-dendritic protein transport","type":"exact"},{"name":"downregulation of axonal protein transport","type":"narrow"},{"name":"inhibition of axo-dendritic protein transport","type":"narrow"},{"name":"inhibition of axonal protein transport","type":"narrow"},{"name":"negative regulation of axonal protein transport","type":"narrow"}],"termid":"GO:1905127"}


id: PBO:0058627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6759","termid":"PBO:0058627"}


id: PBO:0062676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily I member 1","termid":"PBO:0062676"}


id: PBO:0113503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; involved in the methylation of guanosine and uridine ribonucleosides in mRNA; endo-exonuclease with a role in DNA repair","termid":"PBO:0113503"}


id: PBO:0064063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 97","termid":"PBO:0064063"}


id: GO:0018996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The periodic shedding of part or all of a collagen and cuticulin-based cuticle, which is then replaced by a new collagen and cuticulin-based cuticle. An example of this is found in the Nematode worm, Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle, collagen and cuticulin-based cuticle","synonyms":[{"name":"collagen and cuticulin-based cuticle molting cycle","type":"exact"}],"termid":"GO:0018996"}


id: GO:0015080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of silver (Ag+) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"silver ion transmembrane transporter activity","synonyms":[{"name":"silver transporter activity","type":"exact"}],"termid":"GO:0015080"}


id: PBO:0069973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1268, pseudogene","termid":"PBO:0069973"}


id: GO:0090482
data:
  {"annotated_genes":["SJAG_02779","SJAG_03652","SJAG_03503","SJAG_02962","SJAG_02780","SJAG_04673","SJAG_05175","SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70802,88086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[103701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[96770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[104427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[99758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[86182,86183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a vitamin from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03503":null,"SJAG_03652":null,"SJAG_04673":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"vitamin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051183"],"synonyms":[{"name":"vitamin or cofactor transporter activity","type":"broad"},{"name":"vitamin transporter activity","type":"related"}],"termid":"GO:0090482","terms_by_termid":{"GO:0008517":null,"GO:0015225":null,"GO:0015233":null,"GO:0015234":null,"GO:0034216":null,"GO:0090422":null}}


id: PBO:0049614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 17","termid":"PBO:0049614"}


id: GO:0090180
data:
  {"annotated_genes":["SJAG_02406","SJAG_03538"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85070,109848],"is_not":false,"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of vitamin metabolic process","termid":"GO:0046136"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of thiamine biosynthetic process","termid":"GO:0070623"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"thiamine biosynthetic process","termid":"GO:0009228"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"positive regulation of thiamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of thiamin biosynthetic process","type":"exact"}],"termid":"GO:0090180","terms_by_termid":{"GO:0090180":null}}


id: PBO:0061346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 4","termid":"PBO:0061346"}


id: GO:0035363
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body associated with the histone gene locus that is thought to contain all of the factors necessary for histone mRNA transcription and pre-mRNA processing. In Drosophila, U7 snRNP is located in the histone locus body rather than the distinct Cajal body.","definition_xrefs":["GOC:sart","PMID:19620235","PMID:16533947","PMID:18927579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"histone locus body","synonyms":[{"name":"HLB","type":"exact"}],"termid":"GO:0035363"}


id: PBO:0067791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 93","termid":"PBO:0067791"}


id: GO:2000104
data:
  {"annotated_genes":["SJAG_03097","SJAG_01210","SJAG_04855","SJAG_02724","SJAG_03048","SJAG_04671","SJAG_00247","SJAG_03997","SJAG_02162","SJAG_01068"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105030,113037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[105031,98471,93845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[99339],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[98378,102754,104654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043111"},{"annotations":[95448,102755,99340,104655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[98379,111191,95449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[95450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[98380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-dependent DNA replication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA replication","termid":"GO:0008156"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"negatively_regulates","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01068":null,"SJAG_01210":null,"SJAG_02162":null,"SJAG_02724":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA-templated DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of DNA-dependent DNA replication","type":"exact"}],"termid":"GO:2000104","terms_by_termid":{"GO:0011000":null,"GO:0031582":null,"GO:0043111":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null,"GO:1903464":null,"GO:1903467":null}}


id: PBO:0040696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain keto acid dehydrogenase E1 subunit beta","termid":"PBO:0040696"}


id: PBO:0082556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centromeric CDEIII region binding protein; nucleates kinetochore assembly; required for the structural integrity of elongating spindles; copurifies with subunits of the MIND complex and centromeric nucleosome components (Cse4p and histones H2A, H2B, and H4); phosphorylated by Ipl1p; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-C and fission yeast cnp3; localizes to the kinetochore","termid":"PBO:0082556"}


id: GO:0046799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The recruitment of the helicase-primase complex to viral DNA lesions during viral DNA repair.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete recruitment of helicase-primase complex to DNA lesions (obsolete GO:0046799)","termid":"GO:0046799"}


id: FYPO:0000625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal premeiotic DNA replication","synonyms":[{"name":"abnormal meiotic DNA replication","type":"related"},{"name":"abnormal meiotic DNA synthesis","type":"related"},{"name":"abnormal premeiotic DNA synthesis","type":"related"}],"termid":"FYPO:0000625"}


id: PBO:0043712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1","termid":"PBO:0043712"}


id: PBO:0068608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 59, pseudogene","termid":"PBO:0068608"}


id: PR:O13803
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 82 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17H9.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.06c","secondary_identifiers":["UniProtKB:O13803"],"synonyms":[{"name":"Spom972h-CCDC82","type":"exact"}],"termid":"PR:O13803"}


id: GO:0047787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxo-5beta-steroid + NADP+ = a 3-oxo-Delta(4)-steroid + H+ + NADPH. The enzyme from human efficiently catalyzes the reduction of progesterone, androstenedione, 17alpha-hydroxyprogesterone and testosterone to 5beta-reduced metabolites; it can also act on aldosterone, corticosterone and cortisol, but to a lesser extent. The bile acid intermediates 7alpha,12alpha-dihydroxy-4-cholesten-3- one and 7alpha-hydroxy-4-cholesten-3-one can also act as substrates.","definition_xrefs":["EC:1.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enone reductase activity","termid":"GO:0035671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"Delta4-3-oxosteroid 5beta-reductase activity","secondary_identifiers":["GO:0047752","RHEA:54412","MetaCyc:RXN-23672"],"synonyms":[{"name":"3-oxo-5beta-steroid:NADP+ delta4-oxidoreductase activity","type":"exact"},{"name":"3-oxo-Delta(4)-steroid 5-beta-reductase activity","type":"exact"},{"name":"3-oxo-Delta4-steroid 5beta-reductase activity","type":"exact"},{"name":"4,5beta-dihydrocortisone:NADP+ delta4-oxidoreductase activity","type":"narrow"},{"name":"5-beta-reductase activity","type":"broad"},{"name":"5beta-cholestan-3-one:NADP+ 4,5-oxidoreductase activity","type":"narrow"},{"name":"5beta-reductase activity","type":"related"},{"name":"Delta(4)-3-ketosteroid 5-beta-reductase activity","type":"related"},{"name":"Delta(4)-5-beta-reductase activity","type":"related"},{"name":"Delta(4)-hydrogenase activity","type":"related"},{"name":"Delta4-3-ketosteroid 5beta-reductase activity","type":"related"},{"name":"Delta4-3-oxosteroid 5-beta-reductase activity","type":"exact"},{"name":"Delta4-5beta-reductase activity","type":"related"},{"name":"Delta4-hydrogenase activity","type":"related"},{"name":"androstenedione 5-beta-reductase activity","type":"narrow"},{"name":"androstenedione 5beta-reductase activity","type":"narrow"},{"name":"cholestenone 5-beta-reductase activity","type":"narrow"},{"name":"cholestenone 5b-reductase activity","type":"narrow"},{"name":"cholestenone 5beta-reductase activity","type":"narrow"},{"name":"cortisone 5-beta-reductase activity","type":"narrow"},{"name":"cortisone 5beta-reductase activity","type":"narrow"},{"name":"cortisone b-reductase activity","type":"narrow"},{"name":"cortisone beta-reductase activity","type":"narrow"},{"name":"cortisone delta(4)-5-beta-reductase activity","type":"narrow"},{"name":"cortisone delta4-5beta-reductase activity","type":"related"},{"name":"steroid 5-beta-reductase activity","type":"related"},{"name":"steroid 5beta-reductase activity","type":"related"},{"name":"testosterone 5-beta-reductase activity","type":"narrow"},{"name":"testosterone 5beta-reductase activity","type":"narrow"}],"termid":"GO:0047787"}


id: GO:2000251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin cytoskeleton reorganization.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin cytoskeleton reorganization (obsolete GO:2000251)","synonyms":[{"name":"positive regulation of actin cytoskeleton remodeling","type":"exact"},{"name":"positive regulation of actin cytoskeleton reorganisation","type":"exact"}],"termid":"GO:2000251"}


id: PBO:0005619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron hydrogenase (predicted)","termid":"PBO:0005619"}


id: PBO:0084284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for ER to Golgi transport; localized to the Golgi, the ER, and COPII vesicles; interacts with Yip1p and Yif1p","termid":"PBO:0084284"}


id: PBO:0065283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich and Gla domain 3","termid":"PBO:0065283"}


id: SO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cre-Recombination target sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"resolution_site","termid":"SO:0000947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loxP_site","synonyms":[{"name":"Cre-recombination target region","type":"related"},{"name":"loxP site","type":"exact"}],"termid":"SO:0000346"}


id: PR:O94406
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.14","secondary_identifiers":["UniProtKB:O94406"],"synonyms":[{"name":"Spom972h-PRPF18","type":"exact"}],"termid":"PR:O94406"}


id: GO:0032527
data:
  {"annotated_genes":["SJAG_00906","SJAG_03345","SJAG_03907","SJAG_00530"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102692],"is_not":false,"summary":null,"term":"GO:0032527"},{"annotations":[70418],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070863"},{"annotations":[85296,88980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030970"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00530":null,"SJAG_00906":null,"SJAG_03345":null,"SJAG_03907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein exit from endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein exit from ER","type":"exact"},{"name":"protein export from ER","type":"exact"},{"name":"protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0032527","terms_by_termid":{"GO:0030970":null,"GO:0032527":null,"GO:0070863":null}}


id: SO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A scaRNA possessing a box C/D sequence motif, guiding the methylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA","termid":"SO:0002095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_scaRNA","synonyms":[{"name":"C/D scaRNA","type":"exact"}],"termid":"SO:0002369"}


id: GO:0046783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that interferes with and inhibits the assembly and function of polysomes.","definition_xrefs":["PMID:10438802"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by virus of host polysomes (obsolete GO:0046783)","synonyms":[{"name":"viral perturbation of polysomes","type":"exact"}],"termid":"GO:0046783"}


id: FYPO:0005544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abnormal.","definition_xrefs":["PMID:27082518","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to plasma membrane at cell division site during vegetative growth","synonyms":[{"name":"abnormal protein localisation to plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein localization in plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell division site plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization to plasma membrane at cell division site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to plasma membrane division site during vegetative growth","type":"exact"}],"termid":"FYPO:0005544"}


id: PBO:0064208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen activator, urokinase","termid":"PBO:0064208"}


id: PBO:0031717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitochondrial_genome_maintenance","termid":"PBO:0031717"}


id: GO:0032037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heavy chain of a myosin I complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin I binding","termid":"GO:0017024"},{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008092","GO:0005515"],"is_obsolete":false,"name":"myosin I heavy chain binding","termid":"GO:0032037"}


id: PATO:0001318
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A discrimination quality in a bearer by virtue of the bearer's being incapable perceiving differences between two or more stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"discrimination","termid":"PATO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indiscriminate","termid":"PATO:0001318"}


id: GO:0007418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate.","definition_xrefs":["GOC:go_curators","GOC:bf","PMID:12075342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral midline development","termid":"GO:0007418"}


id: GO:0005795
data:
  {"annotated_genes":["SJAG_00330","SJAG_01025","SJAG_01633","SJAG_04095","SJAG_00567","SJAG_01276","SJAG_04739","SJAG_04548","SJAG_01516","SJAG_03347","SJAG_04770","SJAG_02902","SJAG_03278","SJAG_03634","SJAG_03555","SJAG_04112","SJAG_00816"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87189,91607,92477,106994],"is_not":false,"summary":null,"term":"GO:0005795"},{"annotations":[113150,92108],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000137"},{"annotations":[94792],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031985"},{"annotations":[109230,97249,94170,86360],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005797"},{"annotations":[86361,109231,97250,95593,92109],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000138"},{"annotations":[108857],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[101067,93961,83540,114229],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00330":null,"SJAG_00567":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01516":null,"SJAG_01633":null,"SJAG_02902":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04548":null,"SJAG_04739":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"Golgi stack","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016940"],"synonyms":[{"name":"Golgi cisternae","type":"exact"},{"name":"dictyosome","type":"narrow"}],"termid":"GO:0005795","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005795":null,"GO:0005797":null,"GO:0031985":null,"GO:0140497":null}}


id: PBO:0049189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate and hydroxypyruvate reductase","termid":"PBO:0049189"}


id: PBO:0078070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 60 (pseudogene)","termid":"PBO:0078070"}


id: PBO:0068911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 154, pseudogene","termid":"PBO:0068911"}


id: GO:0052032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the normal execution of the  inflammatory response of the host organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host inflammatory response","secondary_identifiers":["GO:0052256"],"synonyms":[{"name":"modulation by organism of inflammatory response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host inflammatory response","type":"exact"},{"name":"perturbation by symbiont of host inflammatory response","type":"exact"}],"termid":"GO:0052032"}


id: PBO:0039397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 2","termid":"PBO:0039397"}


id: PBO:0028804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0028804"}


id: PBO:0016991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin, related to Gsf2","termid":"PBO:0016991"}


id: GO:0072391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"phenol metabolic process","termid":"GO:0072390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol biosynthetic process","termid":"GO:0072391"}


id: PBO:0041067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRI3 binding protein pseudogene 1","termid":"PBO:0041067"}


id: PATO:0000387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hardness quality of giving little resistance to pressure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"hardness","termid":"PATO:0000048"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soft","termid":"PATO:0000387"}


id: GO:1902158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to G2 DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to DNA damage checkpoint signaling","termid":"GO:1902154"},{"relation_name":"is_a","term_name":"regulation of response to G2 DNA damage checkpoint signaling","termid":"GO:1902157"},{"relation_name":"positively_regulates","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to G2 DNA damage checkpoint signaling","synonyms":[{"name":"activation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"activation of response to G2 DNA damage checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"positive regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"positive regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"up regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"up regulation of response to G2 DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"up-regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"up-regulation of response to G2 DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"upregulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"upregulation of response to G2 DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902158"}


id: PBO:0001820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated RNA-binding protein Sap49","termid":"PBO:0001820"}


id: FYPO:0001433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of decamethylenediguanidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to decamethylenediguanidine","synonyms":[{"name":"resistance to Anticoman","type":"exact"},{"name":"resistance to decamethylenediguanidine during mitotic cell cycle","type":"related"},{"name":"resistance to decamethylenediguanidine during vegetative growth","type":"exact"},{"name":"resistant to decamethylenediguanidine","type":"exact"}],"termid":"FYPO:0001433"}


id: PBO:0040701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2L1 antisense RNA 1","termid":"PBO:0040701"}


id: GO:1904848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell chemotaxis to fibroblast growth factor.","definition_xrefs":["GOC:BHF","GOC:rph","GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie","PMID:23233752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904847"},{"relation_name":"negatively_regulates","term_name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell chemotaxis to fibroblast growth factor","synonyms":[{"name":"down regulation of cell chemotaxis to fibroblast growth factor","type":"exact"},{"name":"down-regulation of cell chemotaxis to fibroblast growth factor","type":"exact"},{"name":"downregulation of cell chemotaxis to fibroblast growth factor","type":"exact"},{"name":"inhibition of cell chemotaxis to fibroblast growth factor","type":"narrow"}],"termid":"GO:1904848"}


id: PBO:0069068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 315, pseudogene","termid":"PBO:0069068"}


id: GO:0006620
data:
  {"annotated_genes":["SJAG_00959","SJAG_01496","SJAG_02588","SJAG_00175","SJAG_03955","SJAG_00064","SJAG_02330","SJAG_02354","SJAG_03396","SJAG_02208"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83958,91796,105770],"is_not":false,"summary":null,"term":"GO:0006620"},{"annotations":[105476,94127,106551,102291,86613,93412,104447],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"}]},"cv_name":"biological_process","definition":"The targeting of proteins to a membrane that occurs after their translation. Some secretory proteins exhibit posttranslational transport into the endoplasmic reticulum (ER) lumen: they are synthesized in their entirety on free cytosolic ribosomes and then released into the cytosol, where they are bound by chaperones which keep them in an unfolded state, and subsequently are translocated across the ER membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to membrane","termid":"GO:0006612"},{"relation_name":"is_a","term_name":"protein targeting to ER","termid":"GO:0045047"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00959":null,"SJAG_01496":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03396":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006605","GO:0008150"],"is_obsolete":false,"name":"post-translational protein targeting to endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SRP-independent endoplasmic reticulum protein-membrane targeting","type":"exact"},{"name":"posttranslational endoplasmic reticulum membrane targeting","type":"exact"},{"name":"posttranslational endoplasmic reticulum protein-membrane targeting","type":"exact"},{"name":"posttranslational protein endoplasmic reticulum membrane targeting","type":"exact"},{"name":"posttranslational protein targeting to ER membrane","type":"exact"},{"name":"posttranslational protein targeting to endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0006620","terms_by_termid":{"GO:0006620":null,"GO:0031204":null}}


id: GO:0106262
data:
  {"annotated_genes":["SJAG_04792"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100102],"is_not":false,"summary":null,"term":"GO:0106262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-acyl-sn-glycero-3-phosphoethanolamine + an acyl-CoA = a 1,2-diacyl-sn-glycero-3-phosphoethanolamine + CoA.","definition_xrefs":["RHEA:32995","PMID:18287005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-acylglycerophosphoethanolamine O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.n7"],"termid":"GO:0106262","terms_by_termid":{"GO:0106262":null}}


id: PBO:0033828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase Bpl1 (predicted)","termid":"PBO:0033828"}


id: FYPO:0001540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of manganese ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular manganese level","synonyms":[{"name":"normal cellular manganese accumulation","type":"related"},{"name":"normal cellular manganese ion level","type":"exact"},{"name":"normal cellular manganese level during mitotic cell cycle","type":"related"},{"name":"normal cellular manganese level during vegetative growth","type":"exact"}],"termid":"FYPO:0001540"}


id: PBO:0029911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_sterol_level","termid":"PBO:0029911"}


id: PBO:0066215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 11","termid":"PBO:0066215"}


id: GO:0098507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from the 5' end of a polynucleotide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound metabolic process","termid":"GO:0006139"},{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polynucleotide 5' dephosphorylation","termid":"GO:0098507"}


id: GO:0046353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-deoxystreptamine antibiotic + acetyl-CoA = an N(3')-acetyl-2-deoxystreptamine antibiotic + CoA + H+.","definition_xrefs":["RHEA:12665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aminoglycoside 3-N-acetyltransferase activity","secondary_identifiers":["GO:0016991","EC:2.3.1.81","MetaCyc:AMINOGLYCOSIDE-N3-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"3'-aminoglycoside acetyltransferase activity","type":"related"},{"name":"3-N-aminoglycoside acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:2-deoxystreptamine-antibiotic N3'-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:gentamicin-C N3'-acetyltransferase activity","type":"narrow"},{"name":"aminoglycoside acetyltransferase AAC(3)-1","type":"related"},{"name":"aminoglycoside acetyltransferase AAC(3)-I activity","type":"related"},{"name":"gentamicin 3'-N-acetyltransferase activity","type":"narrow"},{"name":"gentamicin acetyltransferase I activity","type":"narrow"},{"name":"gentamicin-(3)-N-acetyltransferase activity","type":"narrow"},{"name":"gentamycin 3'-N-acetyltransferase activity","type":"exact"},{"name":"gentamycin acetyltransferase I","type":"related"}],"termid":"GO:0046353"}


id: PBO:0067523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 666, pseudogene","termid":"PBO:0067523"}


id: PBO:0038529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 3, phospholipase","termid":"PBO:0038529"}


id: MOD:01887
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonate, Uniblue A, to form Uniblue A lysine adduct.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"Uniblue A derivatized residue","termid":"MOD:01659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uniblue A derivatized lysine","synonyms":[{"name":"1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonate","type":"exact"},{"name":"1-amino-9,10-dioxo-4-{[3-(vinylsulfonyl)phenyl]amino}-9,10-dihydroanthracene-2-sulfonate","type":"exact"},{"name":"N6UniblueALys","type":"exact"},{"name":"Uniblue A","type":"exact"}],"termid":"MOD:01887"}


id: PBO:0080290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 54 pseudogene","termid":"PBO:0080290"}


id: GO:0160006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process mediated by the Fc receptor for the purpose of delivery of antigen-bound immunoglobulin to an intracellular compartment where the antigen can be processed and loaded onto MHC molecules. This process selectively targets antigens for presentation by MHC class II or cross-presentation by MHC class I.","definition_xrefs":["PMID:9463401","PMID:28389502","PMID:9143687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"Fc receptor-mediated immune complex endocytosis","synonyms":[{"name":"Fc receptor-mediated immune complex internalization","type":"related"},{"name":"Ig-complexed antigen endocytosis via Fc receptor","type":"exact"},{"name":"antigen-antibody immune complex uptake via Fc receptor","type":"exact"}],"termid":"GO:0160006"}


id: PBO:0077940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 1-1","termid":"PBO:0077940"}


id: PBO:0111950
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DBF type","termid":"PBO:0111950"}


id: PBO:0066944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 246","termid":"PBO:0066944"}


id: PBO:0076271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYBU antisense RNA 1","termid":"PBO:0076271"}


id: GO:0008615
data:
  {"annotated_genes":["SJAG_01881","SJAG_00283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83760,91550],"is_not":false,"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine metabolic process","termid":"GO:0008614"},{"relation_name":"is_a","term_name":"vitamin B6 biosynthetic process","termid":"GO:0042819"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"pyridoxine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxine anabolism","type":"exact"},{"name":"pyridoxine biosynthesis","type":"exact"},{"name":"pyridoxine formation","type":"exact"},{"name":"pyridoxine synthesis","type":"exact"}],"termid":"GO:0008615","terms_by_termid":{"GO:0008615":null}}


id: PBO:0074133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 34 member 1","termid":"PBO:0074133"}


id: PBO:0058945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 4","termid":"PBO:0058945"}


id: FYPO:0004874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of glucose consumed by cells in a given time is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased glucose consumption","synonyms":[{"name":"decreased glucose consumption during mitotic cell cycle","type":"related"},{"name":"decreased glucose consumption during vegetative growth","type":"exact"},{"name":"decreased glucose uptake","type":"related"},{"name":"reduced glucose consumption","type":"exact"}],"termid":"FYPO:0004874"}


id: PBO:0072686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNDC3A antisense RNA 1","termid":"PBO:0072686"}


id: GO:0005754
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The hexamer, comprising three alpha and three beta subunits, that possesses the catalytic activity of the mitochondrial hydrogen-transporting ATP synthase.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase, catalytic core (obsolete GO:0005754)","termid":"GO:0005754"}


id: GO:1904509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to basolateral plasma membrane.","definition_xrefs":["PMID:26115433","GOC:TermGenie","GOC:kmv","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell periphery","termid":"GO:1904376"},{"relation_name":"is_a","term_name":"regulation of protein localization to basolateral plasma membrane","termid":"GO:1904508"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein localization to basolateral plasma membrane","termid":"GO:1903361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to basolateral plasma membrane","synonyms":[{"name":"down regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"down regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"down regulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"down regulation of protein localization to basolateral plasma membrane","type":"exact"},{"name":"down-regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"down-regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"down-regulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"down-regulation of protein localization to basolateral plasma membrane","type":"exact"},{"name":"downregulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"downregulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"downregulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"downregulation of protein localization to basolateral plasma membrane","type":"exact"},{"name":"inhibition of protein localisation in basolateral plasma membrane","type":"narrow"},{"name":"inhibition of protein localisation to basolateral plasma membrane","type":"narrow"},{"name":"inhibition of protein localization in basolateral plasma membrane","type":"narrow"},{"name":"inhibition of protein localization to basolateral plasma membrane","type":"narrow"},{"name":"negative regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"negative regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"negative regulation of protein localization in basolateral plasma membrane","type":"exact"}],"termid":"GO:1904509"}


id: GO:0047985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2 + NAD+ = H+ + NADH.","definition_xrefs":["EC:1.12.1.2","MetaCyc:HYDROGEN-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","termid":"GO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydrogen dehydrogenase activity","secondary_identifiers":["RHEA:24636"],"synonyms":[{"name":"H(2):NAD(+) oxidoreductase activity","type":"related"},{"name":"H2:NAD+ oxidoreductase activity","type":"related"},{"name":"NAD-linked hydrogenase activity","type":"related"},{"name":"bidirectional hydrogenase activity","type":"broad"},{"name":"hydrogen:NAD+ oxidoreductase activity","type":"related"},{"name":"hydrogenase activity","type":"broad"}],"termid":"GO:0047985"}


id: PBO:0045197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B8","termid":"PBO:0045197"}


id: PBO:0068121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 428","termid":"PBO:0068121"}


id: PR:Q09863
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nst1 gene.","definition_xrefs":["UniProtKB:Q09863","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein nst1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.10c","synonyms":[{"name":"Spom972h-nst1","type":"exact"}],"termid":"PR:Q09863"}


id: PR:Q09916
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01748","PANTHER:PTHR24031:SF23","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase has1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.02c","secondary_identifiers":["UniProtKB:Q09916"],"synonyms":[{"name":"Spom972h-DDX18","type":"exact"}],"termid":"PR:Q09916"}


id: PBO:0065817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4B, member RAS oncogene family","termid":"PBO:0065817"}


id: RO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sends_output_to","termid":"RO:0002486"}


id: PBO:0044174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNNA2 antisense RNA 1","termid":"PBO:0044174"}


id: GO:1901081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of relaxation of smooth muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of relaxation of muscle","termid":"GO:1901078"},{"relation_name":"is_a","term_name":"regulation of relaxation of smooth muscle","termid":"GO:1901080"},{"relation_name":"negatively_regulates","term_name":"relaxation of smooth muscle","termid":"GO:0044557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of relaxation of smooth muscle","synonyms":[{"name":"down regulation of relaxation of smooth muscle","type":"exact"},{"name":"down regulation of smooth muscle relaxation","type":"exact"},{"name":"down-regulation of relaxation of smooth muscle","type":"exact"},{"name":"down-regulation of smooth muscle relaxation","type":"exact"},{"name":"downregulation of relaxation of smooth muscle","type":"exact"},{"name":"downregulation of smooth muscle relaxation","type":"exact"},{"name":"inhibition of relaxation of smooth muscle","type":"narrow"},{"name":"inhibition of smooth muscle relaxation","type":"exact"},{"name":"negative regulation of smooth muscle relaxation","type":"exact"}],"termid":"GO:1901081"}


id: PBO:0047683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flotillin 2","termid":"PBO:0047683"}


id: PBO:0027472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cyclosporin_A_binding","termid":"PBO:0027472"}


id: PBO:0063966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PU.1 (SPI1) induced regulator of S100A8 and S100A9 alarmin transcription 1","termid":"PBO:0063966"}


id: GO:0043933
data:
  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id: SO:0000594
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id: GO:0099018
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id: GO:0051589
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id: GO:0061271
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id: PBO:0081696
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id: PBO:0003416
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id: PBO:0056046
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id: FYPO:0001893
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id: PBO:0081213
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id: PBO:0071105
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id: PBO:0075323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOD2 overlapping transcript 1","termid":"PBO:0075323"}


id: PBO:0080722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT1 transcription factor","termid":"PBO:0080722"}


id: PBO:0089404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uridine) methyltransferase Trm9","termid":"PBO:0089404"}


id: GO:0102466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-carotene + 2 NADH + 2 H+ + 2 O2 = (2R,2'R)-dihydroxy-all-trans-beta-carotene + 2 NAD + 2 H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"beta-carotene 2,2'-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14019"],"termid":"GO:0102466"}


id: _global:contributes_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"_global:capable_of_part_of"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"part_of_structure_that_is_capable_of","termid":"_global:part_of_structure_that_is_capable_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to","secondary_identifiers":["RO:0002326"],"termid":"_global:contributes_to"}


id: GO:0048541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosa-associated lymphoid tissue development","termid":"GO:0048537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Peyer's patch development","synonyms":[{"name":"GALT development","type":"related"},{"name":"gut-associated lymphoid tissue development","type":"related"}],"termid":"GO:0048541"}


id: GO:1902913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuroepithelial cell differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16916506","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"positively_regulates","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuroepithelial cell differentiation","synonyms":[{"name":"activation of neuroepithelial cell differentiation","type":"narrow"},{"name":"up regulation of neuroepithelial cell differentiation","type":"exact"},{"name":"up-regulation of neuroepithelial cell differentiation","type":"exact"},{"name":"upregulation of neuroepithelial cell differentiation","type":"exact"}],"termid":"GO:1902913"}


id: FYPO:0007046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which alkaline phosphatase activity is absent during a cellular response to zinc ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished alkaline phosphatase activity","termid":"FYPO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished alkaline phosphatase activity during cellular response to zinc ion starvation","synonyms":[{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion depletion","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion deprivation","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion limitation","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc starvation","type":"exact"},{"name":"alkaline phosphatase activity abolished during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0007046"}


id: GO:1901088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of benzylpenicillin.","definition_xrefs":["UniPathway:UPA00149","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penicillin biosynthetic process","termid":"GO:0042318"},{"relation_name":"is_a","term_name":"benzylpenicillin metabolic process","termid":"GO:1901086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790","GO:0019748"],"is_obsolete":false,"name":"benzylpenicillin biosynthetic process","synonyms":[{"name":"benzylpenicillin anabolism","type":"exact"},{"name":"benzylpenicillin biosynthesis","type":"exact"},{"name":"benzylpenicillin formation","type":"exact"},{"name":"benzylpenicillin synthesis","type":"exact"},{"name":"penicillin G anabolism","type":"exact"},{"name":"penicillin G biosynthesis","type":"exact"},{"name":"penicillin G formation","type":"exact"},{"name":"penicillin G synthesis","type":"exact"}],"termid":"GO:1901088"}


id: SO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant with in the CDS that causes a change in the resulting polypeptide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_structure_variant","termid":"SO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_sequence_variant","synonyms":[{"name":"polypeptide sequence variant","type":"exact"}],"termid":"SO:0001603"}


id: SO:0001398
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified histidine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_histidine","secondary_identifiers":["MOD:00909"],"synonyms":[{"name":"ModHis","type":"exact"},{"name":"modified L histidine","type":"exact"},{"name":"modified L-histidine","type":"exact"}],"termid":"SO:0001398"}


id: GO:0097132
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D2 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D2-CDK6 complex","termid":"GO:0097132"}


id: PBO:0017561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme E2 Hus5","termid":"PBO:0017561"}


id: FYPO:0006112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0004170"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0008212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0006112"}


id: PBO:0059214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRN complex interacting protein","termid":"PBO:0059214"}


id: PBO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_myxothiazol","termid":"PBO:0035942"}


id: GO:1904248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of age-related resistance.","definition_xrefs":["GO_REF:0000058","PMID:19694953","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"age-related resistance","termid":"GO:0090644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of age-related resistance","synonyms":[{"name":"regulation of ARR","type":"exact"},{"name":"regulation of adult seedling resistance","type":"narrow"},{"name":"regulation of developmental resistance","type":"broad"},{"name":"regulation of flowering-induced resistance","type":"narrow"},{"name":"regulation of mature seedling resistance","type":"narrow"},{"name":"regulation of ontogenic resistance","type":"broad"},{"name":"regulation of senescence-induced resistance","type":"narrow"}],"termid":"GO:1904248"}


id: PBO:0076499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 1 receptor member 2","termid":"PBO:0076499"}


id: PBO:0044207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 6","termid":"PBO:0044207"}


id: PR:Q10200
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC11C11.01 gene.","definition_xrefs":["UniProtKB:Q10200","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11C11.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.01","synonyms":[{"name":"Spom972h-SPBC11C11.01","type":"exact"}],"termid":"PR:Q10200"}


id: GO:0097324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of melanocytes from one site to another, often during the development of a multicellular organism. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.","definition_xrefs":["CL:0000148","PMID:22637532","GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanocyte migration","termid":"GO:0097324"}


id: GO:0071423
data:
  {"annotated_genes":["SJAG_01406","SJAG_02140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114636],"is_not":false,"summary":null,"term":"GO:0071423"},{"annotations":[97745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"}]},"cv_name":"biological_process","definition":"A process in which a malate ion is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transport","termid":"GO:0015743"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"malate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"malate membrane transport","type":"exact"},{"name":"transmembrane malate transport","type":"exact"}],"termid":"GO:0071423","terms_by_termid":{"GO:0071423":null,"GO:0098714":null}}


id: GO:0032871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of karyogamy, the creation of a single nucleus from multiple nuclei as a result of membrane fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleus organization","termid":"GO:1903353"},{"relation_name":"regulates","term_name":"karyogamy","termid":"GO:0000741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of karyogamy","termid":"GO:0032871"}


id: PATO:0000266
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000266 absolute visual_acuity (obsolete PATO:0000266)","termid":"PATO:0000266"}


id: GO:0004796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = thromboxane A(2).","definition_xrefs":["EC:5.3.99.5","RHEA:17137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"thromboxane-A synthase activity","secondary_identifiers":["MetaCyc:THROMBOXANE-A-SYNTHASE-RXN","KEGG_REACTION:R02268","GO:0008400","Reactome:R-HSA-5603275","Reactome:R-HSA-76500"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate isomerase activity","type":"related"},{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate thromboxane-A2-isomerase activity","type":"related"},{"name":"cytochrome P450 CYP5","type":"narrow"},{"name":"thromboxane synthase activity","type":"related"},{"name":"thromboxane synthetase activity","type":"related"}],"termid":"GO:0004796"}


id: MOD:00257
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to dipyrrolylmethanemethyl-L-cysteine.","definition_xrefs":["PubMed:3196304","PubMed:3042456","PubMed:3421931","PubMed:8727319","RESID:AA0252","Unimod:416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipyrrolylmethanemethyl-L-cysteine","synonyms":[{"name":"(2S)-3-[5-[4-(2-carboxy)ethyl-3-carboxymethyl-1-pyrrol-2-yl]methyl-4-(2-carboxy)ethyl-3-carboxymethyl-1-pyrrol-2-yl]methylthio-2-aminopropanoic acid","type":"exact"},{"name":"3-[5-(3-acetic acid-4-propanoic acid-1-pyrrol-2-yl)methyl-3-acetic acid-4-propanoic acid-1-pyrrol-2-yl]methylthio-2-aminopropanoic acid","type":"exact"},{"name":"Dipyrrolylmethanemethyl","type":"related"},{"name":"MOD_RES S-(dipyrrolylmethanemethyl)cysteine","type":"exact"},{"name":"dipyrrole cofactor","type":"exact"},{"name":"dipyrrolylmethanemethyl","type":"related"},{"name":"dipyrrolylmethanemethyl-L-cysteine","type":"exact"},{"name":"dipyrrolylmethyl-L-cysteine","type":"exact"},{"name":"dipyrromethane cofactor","type":"exact"},{"name":"pyrromethane cofactor","type":"exact"}],"termid":"MOD:00257"}


id: PBO:0062106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 4 pseudogene","termid":"PBO:0062106"}


id: PBO:0090503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp3","termid":"PBO:0090503"}


id: PBO:0066978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 281","termid":"PBO:0066978"}


id: PBO:0077634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and ubiquitin like domain containing 2","termid":"PBO:0077634"}


id: PBO:0046279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastin microfibril interfacer 1","termid":"PBO:0046279"}


id: PBO:0089285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp72","termid":"PBO:0089285"}


id: GO:0042772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cascade of processes initiated in response to the detection of DNA damage, and resulting in the induction of transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction in response to DNA damage","termid":"GO:0042770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"DNA damage response, signal transduction resulting in transcription","termid":"GO:0042772"}


id: GO:0021539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the subthalamus over time, from its formation to the mature structure. The subthalamus is the anterior part of the diencephalon that lies between the thalamus, hypothalamus, and tegmentum of the mesencephalon, including subthalamic nucleus, zona incerta, the fields of Forel, and the nucleus of ansa lenticularis.","definition_xrefs":["GOC:cls","GOC:dgh","ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subthalamus development","synonyms":[{"name":"ventral thalamus development","type":"related"}],"termid":"GO:0021539"}


id: GO:1901297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment (obsolete GO:1901297)","synonyms":[{"name":"activation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"narrow"},{"name":"activation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"up regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"up regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"upregulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"upregulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:1901297"}


id: PBO:0068127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 434","termid":"PBO:0068127"}


id: PBO:0051607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 31 receptor A","termid":"PBO:0051607"}


id: GO:0047130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-saccharopine + H2O + NADP+ = 2-oxoglutarate + L-lysine + H+ + NADPH.","definition_xrefs":["EC:1.5.1.8","RHEA:19373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saccharopine dehydrogenase activity","termid":"GO:0004753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"saccharopine dehydrogenase (NADP+, L-lysine-forming) activity","secondary_identifiers":["MetaCyc:1.5.1.8-RXN","KEGG_REACTION:R00716","Reactome:R-HSA-70938","GO:0010010"],"synonyms":[{"name":"6-N-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-lysine-forming)","type":"related"},{"name":"L-lysine-alpha-ketoglutarate reductase activity","type":"related"},{"name":"N6-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-lysine-forming)","type":"related"},{"name":"lysine:alpha-ketoglutarate:TPNH oxidoreductase (epsilon-N-[gultaryl-2]-L-lysine forming)","type":"related"},{"name":"saccharopine (nicotinamide adenine dinucleotide phosphate, lysine-forming) dehydrogenase activity","type":"related"}],"termid":"GO:0047130"}


id: GO:2000234
data:
  {"annotated_genes":["SJAG_04890","SJAG_01764"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88070,92280],"is_not":false,"summary":null,"term":"GO:2000234"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of rRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of rRNA processing","termid":"GO:2000232"},{"relation_name":"positively_regulates","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01764":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of rRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of 35S primary transcript processing","type":"related"}],"termid":"GO:2000234","terms_by_termid":{"GO:2000234":null}}


id: PR:Q9UT12
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ofd2 gene.","definition_xrefs":["UniProtKB:Q9UT12","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8A3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.02c","synonyms":[{"name":"Spom972h-ofd2","type":"exact"}],"termid":"PR:Q9UT12"}


id: PR:O13877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I, II, and III subunit RPABC5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02059","PANTHER:PTHR23413:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I, II, and III subunit RPABC5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.12c","secondary_identifiers":["UniProtKB:O13877"],"synonyms":[{"name":"ABC10-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerases I, II, and III 8.3 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerases I, II, and III subunit ABC5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2L","type":"exact"}],"termid":"PR:O13877"}


id: PBO:0067777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 77","termid":"PBO:0067777"}


id: FYPO:0003573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at the silenced mating-type cassettes is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin at silent mating-type cassette","synonyms":[{"name":"decreased protein localisation to heterochromatin at silent mating-type cassette","type":"exact"},{"name":"decreased protein localization to heterochromatin at mating-type region","type":"exact"},{"name":"decreased protein localization to heterochromatin at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to heterochromatin at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased protein localization to mating-type region heterochromatin","type":"exact"},{"name":"decreased protein localization to silent mating type heterochromatin","type":"exact"},{"name":"reduced protein localization to heterochromatin at silent mating-type cassette","type":"exact"}],"termid":"FYPO:0003573"}


id: GO:0031303
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the endosome membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of endosome membrane (obsolete GO:0031303)","synonyms":[{"name":"integral to endosome membrane","type":"narrow"}],"termid":"GO:0031303"}


id: GO:0006208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"},{"relation_name":"is_a","term_name":"nucleobase catabolic process","termid":"GO:0046113"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleobase catabolic process","synonyms":[{"name":"pyrimidine base breakdown","type":"exact"},{"name":"pyrimidine base catabolic process","type":"exact"},{"name":"pyrimidine base catabolism","type":"exact"},{"name":"pyrimidine base degradation","type":"exact"}],"termid":"GO:0006208"}


id: GO:1904068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled receptor signaling pathway that is involved in social behavior.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:22665789","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"social behavior","termid":"GO:0035176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in social behavior","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G protein coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in cooperative behavior","type":"related"},{"name":"G protein coupled receptor protein signalling pathway involved in social behavior","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor protein signal transduction involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor signalling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in social behaviour","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein-coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein-coupled receptor protein signalling pathway involved in social behavior","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in social behaviour","type":"exact"},{"name":"GPCR signaling pathway involved in cooperative behavior","type":"related"},{"name":"GPCR signaling pathway involved in social behavior","type":"exact"},{"name":"GPCR signaling pathway involved in social behaviour","type":"exact"},{"name":"GPCR signalling pathway involved in cooperative behavior","type":"related"},{"name":"GPCR signalling pathway involved in social behavior","type":"exact"},{"name":"GPCR signalling pathway involved in social behaviour","type":"exact"}],"termid":"GO:1904068"}


id: PBO:0075395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp8 transcription factor","termid":"PBO:0075395"}


id: GO:1904009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium glutamate stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:20704590"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to monosodium glutamate (obsolete GO:1904009)","termid":"GO:1904009"}


id: _global:acts_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within","secondary_identifiers":["RO:0002264"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:acts_upstream_of_or_within"}


id: GO:0044718
data:
  {"annotated_genes":["SJAG_02834","SJAG_02735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61452,61555],"is_not":false,"summary":null,"term":"GO:0044718"}]},"cv_name":"biological_process","definition":"The directed movement of siderophores, low molecular weight Fe(III)-chelating substances, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"},{"relation_name":"is_a","term_name":"iron ion transmembrane transport","termid":"GO:0034755"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"siderophore transmembrane transport","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"siderophore membrane transport","type":"exact"}],"termid":"GO:0044718","terms_by_termid":{"GO:0044718":null}}


id: PATO:0002181
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue the bearer's being changed in position.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced","termid":"PATO:0002181"}


id: PBO:0042104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 177","termid":"PBO:0042104"}


id: GO:0015342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (Zn2+ or Fe2+)(out) = (Zn2+ or Fe2+)(in), probably powered by proton motive force.","definition_xrefs":["TC:2.A.5.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete zinc, iron permease activity (obsolete GO:0015342)","synonyms":[{"name":"zinc, iron permease activity","type":"exact"}],"termid":"GO:0015342"}


id: PBO:0031294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_physical_quality_phenotype","termid":"PBO:0031294"}


id: FYPO:0001659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered cellular cAMP level","synonyms":[{"name":"abnormal cellular cAMP accumulation","type":"related"},{"name":"abnormal cellular cAMP level","type":"exact"},{"name":"altered cellular cyclic AMP level","type":"exact"}],"termid":"FYPO:0001659"}


id: PBO:0058748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6872","termid":"PBO:0058748"}


id: PBO:0060831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN4 antisense RNA 1","termid":"PBO:0060831"}


id: GO:0075345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent alteration by an organism of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host protein (obsolete GO:0075345)","termid":"GO:0075345"}


id: PR:O74304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- win1 gene.","definition_xrefs":["UniProtKB:O74304","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase win1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.09","synonyms":[{"name":"Spom972h-win1","type":"exact"}],"termid":"PR:O74304"}


id: PBO:0111908
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human SLC5A family","termid":"PBO:0111908"}


id: PBO:0083632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain-containing protein involved in endocytosis; actin cytoskeletal organization and cell wall morphogenesis; forms a complex with Sla1p and Pan1p","termid":"PBO:0083632"}


id: GO:0007058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle during meiosis II of a meiotic cell cycle in females. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in female meiosis","termid":"GO:0007056"},{"relation_name":"part_of","term_name":"female meiosis II","termid":"GO:0007147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044085","GO:0007010","GO:0000226","GO:0140013"],"is_obsolete":false,"name":"spindle assembly involved in female meiosis II","synonyms":[{"name":"female meiosis II spindle assembly","type":"related"}],"termid":"GO:0007058"}


id: GO:1903840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenite(3-) stimulus.","definition_xrefs":["GO_REF:0000071","GOC:mr","GOC:TermGenie","PMID:12106899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to arsenic-containing substance","termid":"GO:0046685"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to arsenite(3-)","termid":"GO:1903840"}


id: GO:0009436
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97120,101208],"is_not":false,"summary":null,"term":"GO:0009436"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyoxylate, the anion of glyoxylic acid, HOC-COOH.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"glyoxylate metabolic process","termid":"GO:0046487"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glyoxylate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLYOXDEG-PWY"],"synonyms":[{"name":"glyoxylate breakdown","type":"exact"},{"name":"glyoxylate catabolism","type":"exact"},{"name":"glyoxylate degradation","type":"exact"}],"termid":"GO:0009436","terms_by_termid":{"GO:0009436":null}}


id: PBO:0032744
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predominently single copy (one to one)","termid":"PBO:0032744"}


id: GO:1900898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heptadecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptadecane biosynthetic process","termid":"GO:1900896"},{"relation_name":"is_a","term_name":"positive regulation of heptadecane metabolic process","termid":"GO:1900901"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"positively_regulates","term_name":"heptadecane biosynthetic process","termid":"GO:1900636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heptadecane biosynthetic process","synonyms":[{"name":"activation of heptadecane anabolism","type":"narrow"},{"name":"activation of heptadecane biosynthesis","type":"narrow"},{"name":"activation of heptadecane biosynthetic process","type":"narrow"},{"name":"activation of heptadecane formation","type":"narrow"},{"name":"activation of heptadecane synthesis","type":"narrow"},{"name":"positive regulation of heptadecane anabolism","type":"related"},{"name":"positive regulation of heptadecane biosynthesis","type":"related"},{"name":"positive regulation of heptadecane formation","type":"related"},{"name":"positive regulation of heptadecane synthesis","type":"related"},{"name":"up regulation of heptadecane anabolism","type":"related"},{"name":"up regulation of heptadecane biosynthesis","type":"related"},{"name":"up regulation of heptadecane biosynthetic process","type":"exact"},{"name":"up regulation of heptadecane formation","type":"related"},{"name":"up regulation of heptadecane synthesis","type":"related"},{"name":"up-regulation of heptadecane anabolism","type":"related"},{"name":"up-regulation of heptadecane biosynthesis","type":"related"},{"name":"up-regulation of heptadecane biosynthetic process","type":"exact"},{"name":"up-regulation of heptadecane formation","type":"related"},{"name":"up-regulation of heptadecane synthesis","type":"related"},{"name":"upregulation of heptadecane anabolism","type":"related"},{"name":"upregulation of heptadecane biosynthesis","type":"related"},{"name":"upregulation of heptadecane biosynthetic process","type":"exact"},{"name":"upregulation of heptadecane formation","type":"related"},{"name":"upregulation of heptadecane synthesis","type":"related"}],"termid":"GO:1900898"}


id: GO:0018934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrilotriacetate, an aminotricarboxylic acid that binds bivalent metal ions in a ratio of 1:1. As an important industrial chelating agent, NTA has been widely used for various radionuclide processing and decontamination procedures, such as textile, paper and pulp processing and water treatment.","definition_xrefs":["UM-BBD_pathwayID:nta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nitrilotriacetate metabolic process","synonyms":[{"name":"nitrilotriacetate metabolism","type":"exact"}],"termid":"GO:0018934"}


id: GO:1901481
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99955],"is_not":false,"summary":null,"term":"GO:1901481"}]},"cv_name":"biological_process","definition":"Any L-glutamate import that is involved in cellular response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate import","termid":"GO:0051938"},{"relation_name":"part_of","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"L-glutamate import involved in cellular response to nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-glutamate uptake involved in cellular response to nitrogen starvation","type":"exact"}],"termid":"GO:1901481","terms_by_termid":{"GO:1901481":null}}


id: FYPO:0000459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between centromeres of sister chromatids is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"},{"relation_name":"part_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic centromeric sister chromatid cohesion","synonyms":[{"name":"abnormal centromeric sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"abnormal centromeric sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"abnormal sister chromatid cohesion at centromere during mitosis","type":"exact"}],"termid":"FYPO:0000459"}


id: PBO:0067957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 259","termid":"PBO:0067957"}


id: PBO:0029649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_nucleus_during_vegetative_growth","termid":"PBO:0029649"}


id: GO:0106419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-N6-lipoyl-L-lysyl-[protein] + H2O + NAD+ = 2''-O-lipoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["RHEA:63640","PMID:25525879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"NAD-dependent protein lipoamidase activity","secondary_identifiers":["EC:2.3.1.313","MetaCyc:RXN-22964"],"termid":"GO:0106419"}


id: PBO:0075262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 15","termid":"PBO:0075262"}


id: PBO:0051083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant gamma 1 (G1m marker)","termid":"PBO:0051083"}


id: PBO:0073442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor proline and glutamine rich","termid":"PBO:0073442"}


id: GO:0035949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of gluconeogenesis by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17875938","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035949)","synonyms":[{"name":"positive regulation of gluconeogenesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of gluconeogenesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of glucose biosynthetic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035949"}


id: PR:O43029
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-methyl-L-tryptophan oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02514","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pipecolate oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.15","secondary_identifiers":["UniProtKB:O43029"],"synonyms":[{"name":"L-pipecolic acid oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-solA","type":"exact"}],"termid":"PR:O43029"}


id: GO:1904361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spore germination.","definition_xrefs":["GOC:TermGenie","PMID:8798577","GO_REF:0000058","PMID:14718564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of spore germination","termid":"GO:1904359"},{"relation_name":"positively_regulates","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of spore germination","secondary_identifiers":["GO:0075007"],"synonyms":[{"name":"activation of spore germination","type":"narrow"},{"name":"positive regulation of spore germination on or near host","type":"narrow"},{"name":"up regulation of spore germination","type":"exact"},{"name":"up-regulation of spore germination","type":"exact"},{"name":"upregulation of spore germination","type":"exact"}],"termid":"GO:1904361"}


id: PBO:0050460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hook microtubule tethering protein 1","termid":"PBO:0050460"}


id: FYPO:0006620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal when the cell is returned to glucose-rich medium following glucose starvation.","definition_xrefs":["GO:0006325","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal chromatin organization during recovery from glucose starvation","synonyms":[{"name":"abnormal chromatin organisation during recovery from glucose starvation","type":"exact"},{"name":"abnormal chromatin organization during recovery from glucose depletion","type":"exact"},{"name":"abnormal chromatin organization during recovery from glucose deprivation","type":"exact"},{"name":"abnormal chromatin organization during recovery from glucose limitation","type":"related"},{"name":"abnormal chromatin organization following glucose starvation","type":"exact"}],"termid":"FYPO:0006620"}


id: PBO:0027144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027144"}


id: PBO:0078450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 3","termid":"PBO:0078450"}


id: FYPO:0008102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of tRNA measured in a cell  is increased from normal when the cell is in the vegetative growth phase of the life cycle  during phosphate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA level during vegetative growth","termid":"FYPO:0008101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased tRNA level during cellular response to phosphate starvation","synonyms":[{"name":"increased tRNA production during cellular response to phosphate starvation","type":"related"}],"termid":"FYPO:0008102"}


id: GO:0048100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the wing disc, a precursor to the wing.","definition_xrefs":["PMID:10625531","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"},{"relation_name":"is_a","term_name":"wing disc pattern formation","termid":"GO:0035222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc anterior/posterior pattern formation","termid":"GO:0048100"}


id: PBO:0002972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione transporter Pgt1","termid":"PBO:0002972"}


id: PBO:0076421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9 pseudogene 2","termid":"PBO:0076421"}


id: PBO:0050409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D","termid":"PBO:0050409"}


id: GO:2001100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a pentasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"pentasaccharide transport","termid":"GO:2001100"}


id: GO:0060283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of oocyte development","termid":"GO:0060281"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oocyte development","termid":"GO:0060283"}


id: PBO:0084275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; required for the fusion of ER-derived COPII transport vesicles with the Golgi; interacts with Yip1p and Yos1p; localizes to the Golgi, the ER, and COPII vesicles; homolog of human YIPF3","termid":"PBO:0084275"}


id: GO:0042122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"alginic acid metabolic process","termid":"GO:0042120"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"alginic acid catabolic process","synonyms":[{"name":"alginate catabolic process","type":"exact"},{"name":"alginate catabolism","type":"exact"},{"name":"alginic acid breakdown","type":"exact"},{"name":"alginic acid catabolism","type":"exact"},{"name":"alginic acid degradation","type":"exact"}],"termid":"GO:0042122"}


id: GO:1902670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to carbon dioxide.","definition_xrefs":["GOC:TermGenie","PMID:15491402","GO_REF:0000067","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"carbon dioxide binding","synonyms":[{"name":"CO2 binding","type":"exact"}],"termid":"GO:1902670"}


id: PBO:0066712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 9","termid":"PBO:0066712"}


id: GO:0016775
data:
  {"annotated_genes":["SJAG_00331","SJAG_01587","SJAG_02183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91311,87183,114466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000155"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a nitrogenous group (acceptor).","definition_xrefs":["EC:2.7.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"phosphotransferase activity, nitrogenous group as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016775","terms_by_termid":{"GO:0000155":null}}


