# terms

id: GO:0018228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-S-geranylgeranylcysteine; formation of S-geranylgeranyl-L-cysteine may be coupled with subsequent cleavage of a carboxy-terminal tripeptide for the CAAX motif and methyl esterification of the geranylgeranylated cysteine; methyl esterification but not cleavage occurs for the CXC motif. For the type II geranylgeranyltransferase the residue may be found at the first and final positions in the sequence motif C-X-C* or at the final position in the sequence motif C-C*. These motifs are necessary but not sufficient for modification.","definition_xrefs":["RESID:AA0104"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-S-geranylgeranyl-L-cysteine biosynthetic process from peptidyl-cysteine (obsolete GO:0018228)","synonyms":[{"name":"peptidyl-S-geranylgeranyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-geranylgeranyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-geranylgeranyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018228"}


id: GO:0035700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an astrocyte guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:BHF","PMID:12271471","CL:0000127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte cell migration","termid":"GO:0043615"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte chemotaxis","termid":"GO:0035700"}


id: GO:0034876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isoniazid + H2O = isonicotinate + hydrazine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete isonicotinic acid hydrazide hydrolase activity (obsolete GO:0034876)","termid":"GO:0034876"}


id: PBO:0049665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H19 imprinted maternally expressed transcript","termid":"PBO:0049665"}


id: GO:0038020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the return of an insulin receptor to an active state at the plasma membrane. An active state is when the receptor is ready to receive an insulin signal. Internalized insulin receptors can be recycled to the plasma membrane or sorted to lysosomes for protein degradation.","definition_xrefs":["GOC:bf","GOC:signaling","PMID:3907718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor recycling","termid":"GO:0001881"},{"relation_name":"part_of","term_name":"positive regulation of insulin receptor signaling pathway","termid":"GO:0046628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insulin receptor recycling","termid":"GO:0038020"}


id: GO:1902782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a decane stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","GOC:mengo_curators","PMID:23826995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to decane","termid":"GO:1902782"}


id: FYPO:0002161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing Calcofluor White.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on Calcofluor White","synonyms":[{"name":"normal cell population growth in presence of Calcofluor White","type":"exact"},{"name":"normal cell population growth on Calcofluor White","type":"exact"},{"name":"normal cellular response to Calcofluor White","type":"related"},{"name":"normal vegetative cell population growth on Calcofluor White","type":"exact"}],"termid":"FYPO:0002161"}


id: PR:O94312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain-containing protein2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.07c","synonyms":[{"name":"Spom972h-pdp2","type":"exact"}],"termid":"PR:O94312"}


id: PBO:0030468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pantothenate_import","termid":"PBO:0030468"}


id: PBO:0091177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO deconjugating cysteine peptidase Ulp2","termid":"PBO:0091177"}


id: PBO:0087712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; required for proper termination of transcription for some genes; involved in telomere maintenance","termid":"PBO:0087712"}


id: PBO:0068710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 91, pseudogene","termid":"PBO:0068710"}


id: PBO:0053908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1202","termid":"PBO:0053908"}


id: PBO:0078763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 6","termid":"PBO:0078763"}


id: GO:0030639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones, which are themselves formed by repetitive head-to-tail addition of acetyl (or substituted acetyl) units indirectly derived from acetate (or a substituted acetate) by a mechanism similar to that for fatty acid biosynthesis but without the intermediate reductive steps.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"polyketide biosynthetic process","synonyms":[{"name":"polyketide anabolism","type":"exact"},{"name":"polyketide biosynthesis","type":"exact"},{"name":"polyketide formation","type":"exact"},{"name":"polyketide synthesis","type":"exact"}],"termid":"GO:0030639"}


id: GO:0070609
data:
  {"annotated_genes":["SJAG_00424","SJAG_00610","SJAG_04666","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90985,85471,98958,88451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070607"},{"relation_name":"regulates","term_name":"fungal-type cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070599"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of fungal-type cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ascospore wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"regulation of ascospore wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"regulation of ascospore wall alpha-1,3 glucan metabolism","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan metabolic process","type":"exact"}],"termid":"GO:0070609","terms_by_termid":{"GO:0070610":null}}


id: PR:P0CH06
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi1 gene.","definition_xrefs":["PRO:DAN","UniProtKB:P0CH06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-60S ribosomal protein L40-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.04","synonyms":[{"name":"SPAC11G7.04","type":"related"},{"name":"Spom972h-ubi1","type":"exact"}],"termid":"PR:P0CH06"}


id: GO:0061711
data:
  {"annotated_genes":["SJAG_04182","SJAG_00865"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100266,110411],"is_not":false,"summary":null,"term":"GO:0061711"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonylcarbamoyladenylate + adenine(37) in tRNA = AMP + N(6)-L-threonylcarbamoyladenine(37) in tRNA.","definition_xrefs":["EC:2.3.1.234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00865":null,"SJAG_04182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"N(6)-L-threonylcarbamoyladenine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:37059","MetaCyc:RXN-14570","Reactome:R-HSA-6784494"],"termid":"GO:0061711","terms_by_termid":{"GO:0061711":null}}


id: PBO:0000605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain","termid":"PBO:0000605"}


id: PBO:0069733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1014, pseudogene","termid":"PBO:0069733"}


id: PBO:0086124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for flavinylation of Sdh1p; binds to Sdh1p and promotes FAD cofactor attachment, which is necessary for succinate dehydrogenase (SDH) complex assembly and activity; mutations in human ortholog PGL2 are associated with neuroendocrine tumors (paraganglioma)","termid":"PBO:0086124"}


id: PBO:0090034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, ribosome associated Sks2","termid":"PBO:0090034"}


id: GO:2001261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of semaphorin-plexin signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of semaphorin-plexin signaling pathway","termid":"GO:2001260"},{"relation_name":"negatively_regulates","term_name":"semaphorin-plexin signaling pathway","termid":"GO:0071526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of semaphorin-plexin signaling pathway","synonyms":[{"name":"negative regulation of semaphorin-plexin signalling pathway","type":"exact"}],"termid":"GO:2001261"}


id: PBO:0083844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exopolyphosphatase; hydrolyzes inorganic polyphosphate (poly P) into Pi residues; located in the cytosol, plasma membrane, and mitochondrial matrix","termid":"PBO:0083844"}


id: GO:0002600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002594"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0002598"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"activation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"positive regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"stimulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"up regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"up-regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"upregulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"}],"termid":"GO:0002600"}


id: GO:0072451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about cell size is received and converted into a molecular signal, contributing to a G2/M transition size control checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in G2 cell size control checkpoint (obsolete GO:0072451)","synonyms":[{"name":"G2/M transition size control checkpoint sensor mechanism","type":"related"},{"name":"G2/M transition size control checkpoint sensor process","type":"related"},{"name":"detection of stimulus involved in G2/M transition size control checkpoint","type":"exact"},{"name":"detection of stimulus involved in mitotic cell cycle G2/M transition size control checkpoint","type":"related"},{"name":"sensing involved in G2/M transition size control checkpoint","type":"related"}],"termid":"GO:0072451"}


id: PBO:0029739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level_during_nitrogen_starvation","termid":"PBO:0029739"}


id: GO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the labyrinthine layer of the placenta.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"labyrinthine layer morphogenesis","termid":"GO:0060713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labyrinthine layer formation","termid":"GO:0060714"}


id: GO:0004772
data:
  {"annotated_genes":["SJAG_04049","SJAG_04059"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84803,115063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034737"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + a sterol = a sterol ester + CoA.","definition_xrefs":["RHEA:59816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"sterol O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.26","MetaCyc:RXN-20233","GO:0017066"],"synonyms":[{"name":"sterol-ester synthase activity","type":"related"},{"name":"sterol-ester synthetase activity","type":"related"}],"termid":"GO:0004772","terms_by_termid":{"GO:0034737":null}}


id: GO:0014813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a satellite cell.","definition_xrefs":["GOC:ef","GOC:mtg_muscle","PMID:16607119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"skeletal muscle satellite cell differentiation","termid":"GO:0014816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell commitment","termid":"GO:0014813"}


id: SO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which increases the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_level_variant","termid":"SO:0001553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_translational_product_level","synonyms":[{"name":"increase translational product level","type":"exact"}],"termid":"SO:0001556"}


id: PBO:0069163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 415, pseudogene","termid":"PBO:0069163"}


id: GO:0018391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The ATP-dependent addition of a tyrosine residue to a glutamic acid residue at the C-terminus of a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glutamic acid tyrosinylation (obsolete GO:0018391)","termid":"GO:0018391"}


id: GO:0048209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or destination of vesicle-mediated transport to, from or within the Golgi apparatus.","definition_xrefs":["PMID:10219233","GOC:jid","ISBN:0716731363","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle targeting, to, from or within Golgi","synonyms":[{"name":"regulation of Golgi vesicle targeting","type":"exact"}],"termid":"GO:0048209"}


id: PBO:0053709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 917","termid":"PBO:0053709"}


id: GO:0034417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2,3-bisphosphoglycerate + H2O = (2R)-2-phosphoglycerate + phosphate.","definition_xrefs":["GOC:mah","PMID:18413611","RHEA:27381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"bisphosphoglycerate 3-phosphatase activity","secondary_identifiers":["EC:3.1.3.80","MetaCyc:RXN-11102","KEGG_REACTION:R09532"],"synonyms":[{"name":"2,3-bisphospho-D-glycerate 3-phosphohydrolase activity","type":"related"}],"termid":"GO:0034417"}


id: PBO:0042574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein N-terminal like pseudogene 3","termid":"PBO:0042574"}


id: PBO:0077720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNPO3 pseudogene 1","termid":"PBO:0077720"}


id: PBO:0047739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 3B","termid":"PBO:0047739"}


id: PBO:0081484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 366","termid":"PBO:0081484"}


id: GO:0015450
data:
  {"annotated_genes":["SJAG_03415","SJAG_02077","SJAG_03502","SJAG_01597","SJAG_01879","SJAG_03560","SJAG_03358","SJAG_03515","SJAG_00373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86926,92956,95631,96409,99397,101309,103708,103729,107959],"is_not":false,"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transporter activity","termid":"GO:0008320"},{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_01597":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140318","GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"protein-transporting ATPase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1222523"],"synonyms":[{"name":"P-P-bond-hydrolysis-driven protein transmembrane transporter activity","type":"related"},{"name":"protein translocase activity","type":"exact"}],"termid":"GO:0015450","terms_by_termid":{"GO:0015450":null}}


id: GO:0036440
data:
  {"annotated_genes":["SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA.","definition_xrefs":["RHEA:16845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"citrate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.3.16","KEGG_REACTION:R00351","MetaCyc:CITSYN-RXN"],"termid":"GO:0036440","terms_by_termid":{"GO:0004108":null}}


id: PBO:0113400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative SPOUT methyltransferase; may interact with ribosomes, based on co-purification experiments; predicted to be involved in ribosome biogenesis; contributes to the methylation of Cse4-R37 in G2/M phase; overexpression leads to chromosomal instability; null mutant is resistant to fluconazole; GFP-fusion protein localizes to the nucleolus; YGR283C has a paralog, YMR310C, that arose from the whole genome duplication","termid":"PBO:0113400"}


id: PBO:0042074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 144A","termid":"PBO:0042074"}


id: GO:0019654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of acetate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P142-PWY","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"acetate fermentation","termid":"GO:0019654"}


id: GO:0065005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and lipids to form a protein-lipid complex.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"protein-lipid complex organization","termid":"GO:0071825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"protein-lipid complex assembly","termid":"GO:0065005"}


id: RO:0008506
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship describing organisms that often occur together at the same time and space or in the same environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-occurs","termid":"RO:0008506"}


id: PBO:0059361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 7","termid":"PBO:0059361"}


id: PBO:0040379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit OSCP","termid":"PBO:0040379"}


id: PBO:0065258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 23B","termid":"PBO:0065258"}


id: PBO:0040157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit 3","termid":"PBO:0040157"}


id: GO:0004535
data:
  {"annotated_genes":["SJAG_04519","SJAG_01836","SJAG_00966","SJAG_04407","SJAG_02540"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89446,103923,109084,111838,112791],"is_not":false,"summary":null,"term":"GO:0004535"}]},"cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of poly(A) to 5'-AMP.","definition_xrefs":["ISBN:0198547684","EC:3.1.13.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00966":null,"SJAG_01836":null,"SJAG_02540":null,"SJAG_04407":null,"SJAG_04519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0140098","GO:0016788","GO:0004527"],"is_obsolete":false,"name":"poly(A)-specific ribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-429992","MetaCyc:3.1.13.4-RXN","Reactome:R-HSA-430021","Reactome:R-HSA-9822311","Reactome:R-HSA-429955","Reactome:R-HSA-9822335"],"synonyms":[{"name":"2',3'-exoribonuclease activity","type":"related"},{"name":"3'-exoribonuclease activity","type":"related"},{"name":"poly(A)-specific RNase activity","type":"exact"}],"termid":"GO:0004535","terms_by_termid":{"GO:0004535":null}}


id: PBO:0063136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvin alpha","termid":"PBO:0063136"}


id: GO:1905015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of isoleucine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","PMID:1665486","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of isoleucine-tRNA ligase activity (obsolete GO:1905015)","synonyms":[{"name":"regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"regulation of isoleucine translase activity","type":"exact"},{"name":"regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"}],"termid":"GO:1905015"}


id: MOD:01464
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to an L-methioninium (protonated L-methionine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-methionine (L-methioninium) residue","termid":"MOD:01464"}


id: PBO:0084441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltase (alpha-D-glucosidase); inducible protein involved in maltose catabolism; encoded in the MAL1 complex locus; hydrolyzes the disaccharides maltose, turanose, maltotriose, and sucrose","termid":"PBO:0084441"}


id: PBO:0038921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G3","termid":"PBO:0038921"}


id: PBO:0040774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 7 pseudogene 1","termid":"PBO:0040774"}


id: PBO:0069299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 555, pseudogene","termid":"PBO:0069299"}


id: PBO:0087721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA and SAGA-like transcriptional regulatory complexes; interacts with Spt15p to activate transcription of some RNA polymerase II-dependent genes, also functions to inhibit transcription at some promoters; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087721"}


id: PBO:0053370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 293","termid":"PBO:0053370"}


id: GO:0050198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cinnamoyl-CoA + 3 H+ + 3 malonyl-CoA = 4 CO2 + 4 CoA + pinosylvin.","definition_xrefs":["EC:2.3.1.146","RHEA:12552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pinosylvin synthase activity","secondary_identifiers":["KEGG_REACTION:R02505","MetaCyc:PINOSYLVIN-SYNTHASE-RXN"],"synonyms":[{"name":"malonyl-CoA:cinnamoyl-CoA malonyltransferase (cyclizing)","type":"related"},{"name":"pine stilbene synthase activity","type":"related"},{"name":"stilbene synthase activity","type":"broad"}],"termid":"GO:0050198"}


id: GO:0046662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the deposition of eggs, either fertilized or not, upon a surface or into a medium.","definition_xrefs":["GOC:dph","PMID:11932766","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of egg-laying behavior","secondary_identifiers":["GO:0048042"],"synonyms":[{"name":"regulation of oviposition","type":"exact"},{"name":"regulation of post-mating oviposition","type":"narrow"}],"termid":"GO:0046662"}


id: PR:Q9P3A8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- knd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3A8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin-associated NEDD8-dissociated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.07c","synonyms":[{"name":"Spom972h-knd1","type":"exact"},{"name":"cullin-associated and neddylation-dissociated protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3A8"}


id: PBO:0058800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7706","termid":"PBO:0058800"}


id: GO:0002549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the plasma kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kinin cascade","termid":"GO:0002257"},{"relation_name":"is_a","term_name":"regulation of plasma kallikrein-kinin cascade","termid":"GO:0002529"},{"relation_name":"negatively_regulates","term_name":"plasma kallikrein-kinin cascade","termid":"GO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"negative regulation of plasma kallikrein-kinin cascade","synonyms":[{"name":"down regulation of plasma kallikrein-kinin cascade","type":"exact"},{"name":"down-regulation of plasma kallikrein-kinin cascade","type":"exact"},{"name":"downregulation of plasma kallikrein-kinin cascade","type":"exact"},{"name":"inhibition of plasma kallikrein-kinin cascade","type":"narrow"}],"termid":"GO:0002549"}


id: PBO:0089395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF757 family protein, human PBDC1 ortholog","termid":"PBO:0089395"}


id: PBO:0029385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_at_RxxS_site_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029385"}


id: PBO:0073783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC5A4 antisense RNA 1","termid":"PBO:0073783"}


id: GO:0047853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + bis-D-fructose 2',1:2,1'-dianhydride = inulobiose.","definition_xrefs":["MetaCyc:DIFRUCTOSE-ANHYDRIDE-SYNTHASE-RXN","RHEA:15041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"difructose-anhydride synthase activity","secondary_identifiers":["EC:4.2.1.179"],"synonyms":[{"name":"bis-D-fructose 2',1:2,1'-dianhydride fructohydrolase activity","type":"related"},{"name":"inulobiose hydrolase activity","type":"related"}],"termid":"GO:0047853"}


id: PBO:0080019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 5","termid":"PBO:0080019"}


id: PBO:0078164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 41","termid":"PBO:0078164"}


id: GO:0035522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the ubiquitin group from a monoubiquitinated histone H2A protein.","definition_xrefs":["PMID:20436459","PMID:18226187","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete monoubiquitinated histone H2A deubiquitination (obsolete GO:0035522)","synonyms":[{"name":"monoubiquitinated histone H2A deubiquitinylation","type":"exact"},{"name":"monoubiquitinated histone H2A deubiquitylation","type":"exact"}],"termid":"GO:0035522"}


id: PBO:0028815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_primary_amine_oxidase_activity","termid":"PBO:0028815"}


id: GO:0040011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotion","termid":"GO:0040011"}


id: PBO:0069777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1061, pseudogene","termid":"PBO:0069777"}


id: GO:0002574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a thrombocyte, a nucleated cell found in all vertebrates but mammals involved in hemostasis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thrombocyte differentiation","termid":"GO:0002574"}


id: PBO:0047310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase","termid":"PBO:0047310"}


id: FYPO:0003168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which protein farnesyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal protein farnesyltransferase activity","termid":"FYPO:0003167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished protein farnesyltransferase activity","synonyms":[{"name":"protein farnesyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0003168"}


id: PBO:0016114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule regulator Mtr1","termid":"PBO:0016114"}


id: _global:complete_evidence_for_feature
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"B is complete_evidence_for_feature A if the extent (5' and 3' boundaries) and internal boundaries of B fully support the extent and internal boundaries of A.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"evidence_for_feature","termid":"_global:evidence_for_feature"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complete_evidence_for_feature","termid":"_global:complete_evidence_for_feature"}


id: PBO:0002953
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental disorders","termid":"PBO:0002953"}


id: PBO:0005883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine, mitochondrial","termid":"PBO:0005883"}


id: GO:0090617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["GOC:tb","PMID:25181358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150","GO:0140053"],"is_obsolete":false,"name":"mitochondrial mRNA 5'-end processing","termid":"GO:0090617"}


id: FYPO:0008163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of nuclear foci are increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of nuclear foci","termid":"FYPO:0008163"}


id: PBO:0058288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4663","termid":"PBO:0058288"}


id: GO:0060167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the adenosine receptor signaling pathway. The adenosine receptor pathway is the series of molecular signals generated as a consequence of an adenosine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled adenosine receptor signaling pathway","termid":"GO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of adenosine receptor signaling pathway","synonyms":[{"name":"regulation of adenosine receptor signalling pathway","type":"exact"}],"termid":"GO:0060167"}


id: GO:1904949
data:
  {"annotated_genes":["SJAG_04213","SJAG_04755","SJAG_03694","SJAG_02571","SJAG_00739","SJAG_04097","SJAG_01471","SJAG_00873","SJAG_01397","SJAG_01817","SJAG_04015","SJAG_01111","SJAG_02254","SJAG_01016","SJAG_03839","SJAG_02895","SJAG_05282","SJAG_05192","SJAG_02549","SJAG_02872","SJAG_03844","SJAG_03982","SJAG_04005","SJAG_03758","SJAG_04355","SJAG_00136","SJAG_00735","SJAG_00743","SJAG_02466","SJAG_04596","SJAG_02778","SJAG_02470","SJAG_04989","SJAG_00746","SJAG_03944","SJAG_00934","SJAG_03145","SJAG_01465","SJAG_00440","SJAG_05313","SJAG_02023","SJAG_02990","SJAG_01622","SJAG_01611","SJAG_03576","SJAG_05020","SJAG_00516","SJAG_02869","SJAG_02782","SJAG_02303","SJAG_04879","SJAG_03406","SJAG_02994","SJAG_03579","SJAG_02798","SJAG_05294","SJAG_04955","SJAG_00045","SJAG_03787","SJAG_03033","SJAG_02447","SJAG_02385","SJAG_03036","SJAG_02589","SJAG_00212","SJAG_01447","SJAG_01913","SJAG_02500"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008623"},{"annotations":[95016,96118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904564"},{"annotations":[105198,90050,110387,95475,109310,105715,95224,88819,84904,90164,97776,97648,91523,108393,111571,89540,83837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031011"},{"annotations":[96598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033176"},{"annotations":[100680,101139,109296,110562,106755,90053,84191,90197,111425,90253,88319,83691,86616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016586"},{"annotations":[108260,88094,109455,104298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"},{"annotations":[86617,90198,91946,104600,83692,90179,90054,103576,109297,111174,89543,90254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016514"},{"annotations":[84015,95046,97780,109482,105206,94318,108397,92716,113637,97064,86724,110880,109313,113452,104015,88397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"},{"annotations":[86189,100030,96026,91710,85876,88075],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[94997,98776,114910,97726,96100,106013,84069,92678],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of ATPase activity.","definition_xrefs":["GOC:TermGenie","PMID:9606181","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":68,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00136":null,"SJAG_00212":null,"SJAG_00440":null,"SJAG_00516":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00873":null,"SJAG_00934":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01465":null,"SJAG_01471":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02385":null,"SJAG_02447":null,"SJAG_02466":null,"SJAG_02470":null,"SJAG_02500":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02778":null,"SJAG_02782":null,"SJAG_02798":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02895":null,"SJAG_02990":null,"SJAG_02994":null,"SJAG_03033":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03406":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_03758":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03844":null,"SJAG_03944":null,"SJAG_03982":null,"SJAG_04005":null,"SJAG_04015":null,"SJAG_04097":null,"SJAG_04213":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_04755":null,"SJAG_04879":null,"SJAG_04955":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05282":null,"SJAG_05294":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ATPase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"VPS4 complex","type":"narrow"}],"termid":"GO:1904949","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0000812":null,"GO:0008623":null,"GO:0016514":null,"GO:0016586":null,"GO:0031011":null,"GO:0033176":null,"GO:0070824":null,"GO:1904564":null}}


id: RO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"RO:0002022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulated_by","termid":"RO:0002024"}


id: SO:1000109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000109 mutation_causing_out_of_frame_polypeptide_C_terminal_elongation (obsolete SO:1000109)","synonyms":[{"name":"mutation causing out of frame polypeptide C terminal elongation","type":"exact"},{"name":"out of frame polypeptide C-terminal elongation","type":"exact"}],"termid":"SO:1000109"}


id: FYPO:0005379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle pole bodies are normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"output_of","term_name":"normal spindle pole body organization","termid":"FYPO:0005378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spindle pole body","synonyms":[{"name":"normal SPB","type":"exact"}],"termid":"FYPO:0005379"}


id: FYPO:0006593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of spindle microtubules from the spindle pole body (SPB) occurs to a lesser extent than normal.","definition_xrefs":["PMID:19942852","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic microtubule nucleation","termid":"FYPO:0006336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule nucleation from spindle pole body","synonyms":[{"name":"decreased microtubule nucleation from spindle pole body during mitotic cell cycle","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation by spindle pole body","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from SPB","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during mitotic M phase","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during vegetative growth","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic SPB","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic spindle pole body","type":"exact"},{"name":"reduced mitotic spindle microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0006593"}


id: GO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of platelet activating factor following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet activating factor production involved in inflammatory response","secondary_identifiers":["GO:0002392","GO:0002535","GO:0002390"],"synonyms":[{"name":"platelet activating factor production","type":"related"},{"name":"platelet activating factor production involved in acute inflammatory response","type":"narrow"},{"name":"platelet activating factor secretion","type":"narrow"},{"name":"platelet activating factor secretion involved in acute inflammatory response","type":"narrow"},{"name":"platelet activating factor secretion involved in inflammatory response","type":"narrow"}],"termid":"GO:0002391"}


id: GO:0004903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a growth hormone and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"growth hormone receptor activity","termid":"GO:0004903"}


id: PBO:0034662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_to_vacuole_transport","termid":"PBO:0034662"}


id: MOD:02024
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a cervonoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"cervonoylated residue","termid":"MOD:02024"}


id: PBO:0080101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP11 small subunit processome component","termid":"PBO:0080101"}


id: PATO:0000326
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000326 dim (obsolete PATO:0000326)","termid":"PATO:0000326"}


id: PBO:0003020
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible frameshifts","termid":"PBO:0003020"}


id: FYPO:0004614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, is abnormal.","definition_xrefs":["PomBase:mah","GO:0046785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule polymerization during vegetative growth","synonyms":[{"name":"abnormal microtubule growth","type":"exact"},{"name":"abnormal microtubule polymerisation","type":"exact"},{"name":"abnormal microtubule polymerisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule rescue","type":"related"}],"termid":"FYPO:0004614"}


id: SO:1000107
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000107 mutation_causing_out_of_frame_polypeptide_N_terminal_elongation (obsolete SO:1000107)","synonyms":[{"name":"mutation causing out of frame polypeptide N terminal elongation","type":"exact"},{"name":"out of frame polypeptide N-terminal elongation","type":"exact"}],"termid":"SO:1000107"}


id: GO:0018664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + H+ + NADPH + O2 = 4-hydroxybenzoate + H2O + NADP+.","definition_xrefs":["RHEA:18033","EC:1.14.14.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"benzoate 4-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0623","KEGG_REACTION:R01295","MetaCyc:BENZOATE-4-MONOOXYGENASE-RXN"],"synonyms":[{"name":"4-hydroxybenzoic hydroxylase activity","type":"exact"},{"name":"benzoate 4-hydroxylase activity","type":"related"},{"name":"benzoate,NADPH:oxygen oxidoreductase (4-hydroxylating)","type":"related"},{"name":"benzoate-p-hydroxylase activity","type":"related"},{"name":"benzoate-para-hydroxylase activity","type":"related"},{"name":"benzoic 4-hydroxylase activity","type":"related"},{"name":"benzoic acid 4-hydroxylase activity","type":"related"},{"name":"p-hydroxybenzoate hydroxylase activity","type":"related"}],"termid":"GO:0018664"}


id: PBO:0058690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6818","termid":"PBO:0058690"}


id: PBO:0071013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 15","termid":"PBO:0071013"}


id: GO:0034957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-nitrophenol + 2 NADH + 2 H+ = 3-hydroxyaminophenol + 2 NAD+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-nitrophenol nitroreductase activity (obsolete GO:0034957)","termid":"GO:0034957"}


id: GO:0045822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of heart contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"is_a","term_name":"negative regulation of blood circulation","termid":"GO:1903523"},{"relation_name":"negatively_regulates","term_name":"heart contraction","termid":"GO:0060047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart contraction","synonyms":[{"name":"down regulation of heart contraction","type":"exact"},{"name":"down-regulation of heart contraction","type":"exact"},{"name":"downregulation of heart contraction","type":"exact"},{"name":"inhibition of heart contraction","type":"narrow"},{"name":"negative regulation of cardiac contraction","type":"related"}],"termid":"GO:0045822"}


id: GO:0044414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the normal execution of host defense(s) by active mechanisms that normally result in the shutting down of a host pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defenses","termid":"GO:0030682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host defenses","secondary_identifiers":["GO:0052261","GO:0051833","GO:0052037"],"synonyms":[{"name":"down regulation by organism of defense response of other organism during symbiotic interaction","type":"related"},{"name":"down regulation by symbiont of host defense response","type":"exact"},{"name":"down-regulation by organism of defense response of other organism during symbiotic interaction","type":"related"},{"name":"down-regulation by symbiont of host defense response","type":"exact"},{"name":"downregulation by organism of defense response of other organism during symbiotic interaction","type":"related"},{"name":"downregulation by symbiont of host defense response","type":"exact"},{"name":"inhibition by organism of defense response of other organism during symbiotic interaction","type":"narrow"},{"name":"inhibition by symbiont of host defense response","type":"narrow"},{"name":"negative regulation by organism of defense response of other organism during symbiotic interaction","type":"related"},{"name":"negative regulation by organism of defense response of other organism involved in symbiotic interaction","type":"exact"},{"name":"negative regulation by symbiont of host defense response","type":"exact"},{"name":"negative regulation of host defenses","type":"exact"},{"name":"suppression of defense response of other organism","type":"exact"},{"name":"suppression of defense response of other organism involved in symbiotic interaction","type":"related"},{"name":"suppression of defenses of other organism involved in symbiotic interaction","type":"broad"},{"name":"suppression of host defense response","type":"exact"},{"name":"suppression of host defenses by symbiont","type":"exact"}],"termid":"GO:0044414"}


id: GO:0071382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin I stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin I","termid":"GO:0034697"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin I stimulus","termid":"GO:0071382"}


id: FYPO:0001593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of valine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal valine import","termid":"FYPO:0001658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased valine import","synonyms":[{"name":"decreased L-valine import","type":"exact"},{"name":"decreased L-valine import across plasma membrane","type":"exact"},{"name":"decreased valine import during mitotic cell cycle","type":"related"},{"name":"decreased valine import during vegetative growth","type":"exact"},{"name":"decreased valine import into cell","type":"exact"},{"name":"decreased valine uptake","type":"exact"},{"name":"reduced valine import","type":"exact"}],"termid":"FYPO:0001593"}


id: GO:0102622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linuron + H2O = N,O-dimethylhydroxylamine + carbon dioxide + 3,4-dichloroaniline.","definition_xrefs":["EC:3.5.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"linuron hydrolase activity","secondary_identifiers":["MetaCyc:RXN-15526"],"termid":"GO:0102622"}


id: PBO:0043017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHL1 antisense RNA 1","termid":"PBO:0043017"}


id: PBO:0072924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 5","termid":"PBO:0072924"}


id: GO:1905192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chloroplast fission.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26862170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"chloroplast fission","termid":"GO:0010020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chloroplast fission","synonyms":[{"name":"regulation of chloroplast division","type":"exact"}],"termid":"GO:1905192"}


id: GO:0039551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of host IRF3 (interferon regulatory factor-3) by promoting the ubiquitin-dependent degradation of IRF3, mediated by the proteasome.","definition_xrefs":["VZ:757"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF3 activity by positive regulation of IRF3 catabolic process (obsolete GO:0039551)","synonyms":[{"name":"promotion by virus of proteosome-dependent IRF3 degradation","type":"exact"}],"termid":"GO:0039551"}


id: GO:1903982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases the length of a microvillus.","definition_xrefs":["PMID:22114352","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of microvillus length","termid":"GO:0032532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microvillus length","synonyms":[{"name":"down regulation of regulation of microvillus length","type":"exact"},{"name":"down-regulation of regulation of microvillus length","type":"exact"},{"name":"downregulation of regulation of microvillus length","type":"exact"},{"name":"inhibition of regulation of microvillus length","type":"narrow"}],"termid":"GO:1903982"}


id: MOD:00894
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified resiues with a mass of 128.058578 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 128.0-128.1","termid":"MOD:00893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 128.058578 Da","termid":"MOD:00894"}


id: PATO:0001004
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001004 absolute alternation value (obsolete PATO:0001004)","termid":"PATO:0001004"}


id: FYPO:0003968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that has a larger diameter and volume than normal, then initiates growth from the opposite end of the spore body, and does not go on to form a viable dividing cell. The cell may undergo one or two rounds of nuclear division, but does not undergo cytokinesis.","definition_xrefs":["PMID:9105045","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with swollen elongated germ tube","termid":"FYPO:0002911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with swollen elongated germ tube and bidirectional cell growth from spore body","synonyms":[{"name":"inviable after spore germination, without cell division, with swollen elongated cell and bidirectional cell growth from spore body","type":"exact"},{"name":"lethal after spore germination, without cell division, with swollen elongated germ tube and bidirectional cell growth from spore body","type":"exact"}],"termid":"FYPO:0003968"}


id: PBO:0055432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2862","termid":"PBO:0055432"}


id: GO:0021951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that guide a precerebellar neuron towards their signals, where this process is involved in tangential migration.","definition_xrefs":["GOC:jid","PMID:15157725","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"brainstem precerebellar neuron precursor migration","termid":"GO:0021949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction involved in precerebellar neuron migration","synonyms":[{"name":"positive chemotaxis involved in precerebellar neuron migration","type":"exact"}],"termid":"GO:0021951"}


id: GO:0010216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An epigenetic gene regulation mechanism that negatively regulates gene expression by methylation of cytosine residues in chromosomal DNA.","definition_xrefs":["PMID:11898023"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of gene expression via chromosomal DNA cytosine methylation (obsolete GO:0010216)","synonyms":[{"name":"maintenance of DNA methylation","type":"broad"}],"termid":"GO:0010216"}


id: PBO:0091152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit Gon7","termid":"PBO:0091152"}


id: PBO:0069147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 398, pseudogene","termid":"PBO:0069147"}


id: PBO:0005249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylulose kinase (predicted)","termid":"PBO:0005249"}


id: SO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":".","definition_xrefs":["SO:ma"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000311 computed_feature_by_similarity (obsolete SO:0000311)","termid":"SO:0000311"}


id: PBO:0080903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 3","termid":"PBO:0080903"}


id: GO:0034604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + NAD+ = acetyl-CoA + CO2 + NADH.","definition_xrefs":["ISBN:0201090910","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase [NAD(P)+] activity","termid":"GO:0034603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyruvate dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:28042","EC:1.2.1.104","KEGG_REACTION:R00209","MetaCyc:PYRUVDEH-RXN"],"termid":"GO:0034604"}


id: PBO:0081377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 215","termid":"PBO:0081377"}


id: GO:0032867
data:
  {"annotated_genes":["SJAG_03958","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91813,97275],"is_not":false,"summary":null,"term":"GO:0032867"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabitol + NADP+ = L-arabinose + NADPH + H+.","definition_xrefs":["RHEA:25229","PMID:12724380","PMID:15184173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldose reductase (NADPH) activity","termid":"GO:0004032"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-arabinose reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01759","MetaCyc:RXN-8772","SABIO-RK:1858"],"synonyms":[{"name":"L-arabinose:NADP reductase activity","type":"exact"},{"name":"arabinose reductase activity","type":"broad"},{"name":"arabinose:NADP reductase activity","type":"broad"}],"termid":"GO:0032867","terms_by_termid":{"GO:0032867":null}}


id: PBO:0058438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5002","termid":"PBO:0058438"}


id: PBO:0086310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with potential role in actin cytoskeleton organization; null mutant is slow-growing, sensitive to Congo Red, impaired in endocytosis, has increased lifespan; gene exhibits synthetic genetic interaction with MSS4 encoding phosphatidylinositol 4-phosphate kinase","termid":"PBO:0086310"}


id: PBO:0068838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 76, pseudogene","termid":"PBO:0068838"}


id: GO:0071222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipopolysaccharide","termid":"GO:0032496"},{"relation_name":"is_a","term_name":"cellular response to molecule of bacterial origin","termid":"GO:0071219"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipopolysaccharide","synonyms":[{"name":"cellular response to LPS","type":"exact"},{"name":"cellular response to endotoxin","type":"broad"}],"termid":"GO:0071222"}


id: FYPO:0009068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ciclopirox olamine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to ciclopirox olamine","synonyms":[{"name":"resistance to ciclopirox olamine during mitotic cell cycle","type":"related"},{"name":"resistance to ciclopirox olamine during vegetative growth","type":"exact"},{"name":"resistant to ciclopirox olamine","type":"exact"}],"termid":"FYPO:0009068"}


id: PBO:0056380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK10 antisense RNA 1","termid":"PBO:0056380"}


id: PBO:0086291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in endocytosis and vacuole integrity; peripheral membrane protein; interacts with and negatively regulates Arl1p; localizes to the endosome; member of the Sec7p family of proteins","termid":"PBO:0086291"}


id: PBO:0075111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 160","termid":"PBO:0075111"}


id: PBO:0045073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 5","termid":"PBO:0045073"}


id: GO:0002023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An eating behavior process whereby detection of a dietary excess results in a decrease in intake of nutrients.","definition_xrefs":["GOC:pg","PMID:12840200","GOC:pr","PMID:12161655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating behavior","termid":"GO:0042755"},{"relation_name":"part_of","term_name":"response to dietary excess","termid":"GO:0002021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reduction of food intake in response to dietary excess","termid":"GO:0002023"}


id: PBO:0071323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 7","termid":"PBO:0071323"}


id: PBO:0074482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 1","termid":"PBO:0074482"}


id: PBO:0026816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_nitrogen_starvation","termid":"PBO:0026816"}


id: PBO:0040950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 21","termid":"PBO:0040950"}


id: GO:0071882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by ligand binding to an adrenergic receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating adrenergic receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by adrenergic receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by adrenergic receptor signalling pathway","type":"related"},{"name":"adrenergic receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0071882"}


id: PBO:0085557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing an N-terminal epsin-like domain; involved in clathrin recruitment and traffic between the Golgi and endosomes; associates with the clathrin adaptor Gga2p, clathrin adaptor complex AP-1, and clathrin","termid":"PBO:0085557"}


id: PBO:0025541
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae VAM7","termid":"PBO:0025541"}


id: GO:0035669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor 4 where the TRAM adaptor mediates transduction of the signal. Toll-like 4 receptors are pattern recognition receptors that bind bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["PMID:18297073","GOC:BHF","PMID:14556004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"},{"relation_name":"is_a","term_name":"TRAM-dependent toll-like receptor signaling pathway","termid":"GO:0035668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRAM-dependent toll-like receptor 4 signaling pathway","synonyms":[{"name":"TRAM-dependent TLR4 signaling pathway","type":"exact"},{"name":"TRAM-dependent toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0035669"}


id: PBO:0061149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 1","termid":"PBO:0061149"}


id: GO:1905892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to thapsigargin.","definition_xrefs":["PMID:21803450","GOC:aruk","GO_REF:0000058","GOC:bc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to thapsigargin (obsolete GO:1905892)","synonyms":[{"name":"down regulation of cellular response to thapsigargin","type":"exact"},{"name":"down-regulation of cellular response to thapsigargin","type":"exact"},{"name":"downregulation of cellular response to thapsigargin","type":"exact"},{"name":"inhibition of cellular response to thapsigargin","type":"narrow"}],"termid":"GO:1905892"}


id: PBO:0028222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_splicing","termid":"PBO:0028222"}


id: PBO:0057768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2114","termid":"PBO:0057768"}


id: PBO:0059402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S31 pseudogene 5","termid":"PBO:0059402"}


id: GO:0005781
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome targeting signal receptor complex (obsolete GO:0005781)","synonyms":[{"name":"peroxisome targeting signal receptor complex","type":"exact"}],"termid":"GO:0005781"}


id: GO:0052668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,-6-trans-farnesol + CTP = 2-trans,-6-trans-farnesyl monophosphate + CDP + H+.","definition_xrefs":["RHEA:51680","PMID:21395888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenol kinase activity","termid":"GO:0052673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"CTP:farnesol kinase activity","secondary_identifiers":["GO:0052669","EC:2.7.1.216","MetaCyc:RXN-11625"],"synonyms":[{"name":"CTP:2-trans,-6-trans-farnesol kinase activity","type":"exact"},{"name":"CTP:2-trans,-6-trans-farnesol phosphotransferase activity","type":"exact"},{"name":"farnesol kinase activity","type":"related"},{"name":"farnesol phosphotransferase activity","type":"exact"},{"name":"trans,trans-farnesol kinase activity","type":"narrow"}],"termid":"GO:0052668"}


id: PR:O94728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1604.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.16c","synonyms":[{"name":"Spom972h-SPBC1604.16c","type":"exact"}],"termid":"PR:O94728"}


id: PBO:0063521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDXP divergent transcript","termid":"PBO:0063521"}


id: GO:0071455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating increased oxygen tension.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to increased oxygen levels","termid":"GO:0036295"},{"relation_name":"is_a","term_name":"response to hyperoxia","termid":"GO:0055093"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hyperoxia","synonyms":[{"name":"cellular response to hyperoxic stress","type":"exact"},{"name":"cellular response to increased oxygen tension","type":"exact"}],"termid":"GO:0071455"}


id: PBO:0082146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA:sterol acyltransferase; endoplasmic reticulum enzyme that contributes the major sterol esterification activity in the absence of oxygen; ARE1 has a paralog, ARE2, that arose from the whole genome duplication","termid":"PBO:0082146"}


id: FYPO:0007506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more specific promoter elements is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to chromatin at promoter","synonyms":[{"name":"increased protein localisation to chromatin at promoter","type":"exact"},{"name":"increased protein localization to chromatin at promoter during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0007506"}


id: PBO:0047238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member J","termid":"PBO:0047238"}


id: GO:1905427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any intracellular signal transduction that is involved in positive regulation of cell growth.","definition_xrefs":["GO_REF:0000060","GOC:al","GOC:vw","GOC:TermGenie","PMID:15917811"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular signal transduction involved in positive regulation of cell growth (obsolete GO:1905427)","synonyms":[{"name":"intracellular protein kinase cascade involved in activation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in positive regulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in up regulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in up-regulation of cell growth","type":"narrow"},{"name":"intracellular protein kinase cascade involved in upregulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction involved in activation of cell growth","type":"narrow"},{"name":"intracellular signal transduction involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction involved in up regulation of cell growth","type":"exact"},{"name":"intracellular signal transduction involved in up-regulation of cell growth","type":"exact"},{"name":"intracellular signal transduction involved in upregulation of cell growth","type":"exact"},{"name":"intracellular signal transduction pathway involved in activation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in positive regulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in up regulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in up-regulation of cell growth","type":"narrow"},{"name":"intracellular signal transduction pathway involved in upregulation of cell growth","type":"narrow"},{"name":"intracellular signaling cascade involved in activation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in positive regulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in stimulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in up regulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in up-regulation of cell growth","type":"related"},{"name":"intracellular signaling cascade involved in upregulation of cell growth","type":"related"},{"name":"intracellular signaling chain involved in activation of cell growth","type":"narrow"},{"name":"intracellular signaling chain involved in positive regulation of cell growth","type":"exact"},{"name":"intracellular signaling chain involved in stimulation of cell growth","type":"narrow"},{"name":"intracellular signaling chain involved in up regulation of cell growth","type":"exact"},{"name":"intracellular signaling chain involved in up-regulation of cell growth","type":"exact"},{"name":"intracellular signaling chain involved in upregulation of cell growth","type":"exact"},{"name":"intracellular signaling pathway involved in activation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in positive regulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in stimulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in up regulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in up-regulation of cell growth","type":"related"},{"name":"intracellular signaling pathway involved in upregulation of cell growth","type":"related"},{"name":"protein kinase cascade involved in activation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in positive regulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in stimulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in up regulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in up-regulation of cell growth","type":"narrow"},{"name":"protein kinase cascade involved in upregulation of cell growth","type":"narrow"},{"name":"signal transduction via intracellular signaling cascade involved in activation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in positive regulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in stimulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in up regulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in up-regulation of cell growth","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in upregulation of cell growth","type":"related"},{"name":"signal transmission via intracellular cascade involved in activation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in positive regulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in stimulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in up regulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in up-regulation of cell growth","type":"narrow"},{"name":"signal transmission via intracellular cascade involved in upregulation of cell growth","type":"narrow"}],"termid":"GO:1905427"}


id: PBO:0059808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 34","termid":"PBO:0059808"}


id: PR:Q9USM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp1 gene.","definition_xrefs":["UniProtKB:Q9USM5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase Ubp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.12c","synonyms":[{"name":"SPCC16A11.12c","type":"related"},{"name":"Spom972h-ubp1","type":"exact"},{"name":"deubiquitinating enzyme 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin carboxyl-terminal hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"ubiquitin thioesterase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USM5"}


id: GO:1901355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rapamycin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to rapamycin","termid":"GO:1901355"}


id: PBO:0047604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile histidine triad diadenosine triphosphatase","termid":"PBO:0047604"}


id: PBO:0027798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tetraplatin","termid":"PBO:0027798"}


id: PBO:0003894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-K ortholog, Sim4","termid":"PBO:0003894"}


id: PBO:0028242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_vacuolated_spheroid_vegetative_cell","termid":"PBO:0028242"}


id: PBO:0060234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB antisense RNA 1","termid":"PBO:0060234"}


id: GO:0021883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the cell cycle is halted during one of the normal phases (G1, S, G2, M) in a cell that has been committed to become a neuron that will reside in the forebrain.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","GOC:dph","PMID:16226447","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle arrest of committed forebrain neuronal progenitor cell (obsolete GO:0021883)","termid":"GO:0021883"}


id: GO:1990860
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cyclin dependent kinase (CDK) complex that contains a kinase subunit and a regulatory cyclin subunit. An example of this complex in budding yeast S. cerevisiae consists of the Pho85 kinase and the Pho80 cyclin.","definition_xrefs":["PMID:8108735","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Pho85-Pho80 CDK-cyclin complex","termid":"GO:1990860"}


id: PBO:0058780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7114","termid":"PBO:0058780"}


id: PBO:0113383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein, involved in salt tolerance; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; YMR253C is not an essential gene","termid":"PBO:0113383"}


id: GO:0009641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Shade avoidance is a set of responses that plants display when they are subjected to the shade of another plant. It often includes elongation, altered flowering time, increased apical dominance and altered partitioning of resources. Plants are able to distinguish between the shade of an inanimate object (e.g. a rock) and the shade of another plant due to the altered balance between red and far-red light in the shade of a plant; this balance between red and far-red light is perceived by phytochrome.","definition_xrefs":["Wikipedia:Shade_avoidance"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shade avoidance","termid":"GO:0009641"}


id: GO:0141000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 4 at the lysine-91 residue.","definition_xrefs":["PMID:19818714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 ubiquitin ligase activity","termid":"GO:0141056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0004842","GO:0140096","GO:0019787","GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"histone H4K91 ubiquitin ligase activity","synonyms":[{"name":"histone H4-K91 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H4-K91 specific)","type":"exact"}],"termid":"GO:0141000"}


id: PBO:0045438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like C-mannosyltransferase 3","termid":"PBO:0045438"}


id: PBO:0046075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1","termid":"PBO:0046075"}


id: PBO:0088792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication termination factor Rtf2","termid":"PBO:0088792"}


id: PBO:0086879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor; contains a Zn(II)2Cys6 zinc finger domain characteristic of DNA-binding proteins; computational analysis suggests a role in regulation of expression of genes encoding transporters; binds Sin3p in a two-hybrid assay;","termid":"PBO:0086879"}


id: PBO:0061810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 centriole and centriolar satellite protein","termid":"PBO:0061810"}


id: GO:0046899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + AMP = nucleoside diphosphate + ADP.","definition_xrefs":["EC:2.7.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"nucleoside triphosphate adenylate kinase activity","secondary_identifiers":["MetaCyc:2.7.4.10-RXN","RHEA:13749","Reactome:R-HSA-1008248"],"synonyms":[{"name":"GTP:AMP phosphotransferase","type":"narrow"},{"name":"guanosine triphosphate-adenylate kinase","type":"narrow"},{"name":"isozyme 3 of adenylate kinase activity","type":"related"},{"name":"nucleoside triphosphate-adenosine monophosphate transphosphorylase activity","type":"exact"},{"name":"nucleoside-triphosphate-adenylate kinase activity","type":"exact"},{"name":"nucleoside-triphosphate:AMP phosphotransferase activity","type":"related"}],"termid":"GO:0046899"}


id: PBO:0084026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase; highly conserved enzyme that catalyzes the second step in the biosynthesis of GMP from inosine 5'-phosphate (IMP); transcription is not subject to regulation by guanine but is negatively regulated by nutrient starvation; reduction-of-function mutation gua1-G388D causes changes in cellular guanine nucleotide pools, defects in general protein synthesis, and impaired translation of GCN4 mRNA","termid":"PBO:0084026"}


id: GO:0051060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in pullulan (a linear polymer of alpha-(1,6)-linked maltotriose units) and in amylopectin and glycogen, and the a- and b-limit dextrins of amylopectin and glycogen.","definition_xrefs":["EC:3.2.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"pullulanase activity","secondary_identifiers":["MetaCyc:RXN-1824"],"synonyms":[{"name":"R-enzyme","type":"related"},{"name":"alpha-dextrin endo-1,6-alpha-glucosidase activity","type":"exact"},{"name":"amylopectin 6-glucanohydrolase activity","type":"exact"},{"name":"bacterial debranching enzyme","type":"related"},{"name":"debranching enzyme activity","type":"broad"},{"name":"limit dextrinase","type":"related"},{"name":"pullulan 6-glucanohydrolase activity","type":"exact"},{"name":"pullulan alpha-1,6-glucanohydrolase activity","type":"related"}],"termid":"GO:0051060"}


id: GO:0097060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized area of membrane on either the presynaptic or the postsynaptic side of a synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.","definition_xrefs":["GOC:BHF","PMID:20410104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"synaptic membrane","termid":"GO:0097060"}


id: PBO:0045413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA4 pseudogene 2","termid":"PBO:0045413"}


id: PBO:0057440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 557","termid":"PBO:0057440"}


id: PBO:0060182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 3A, cell surface associated","termid":"PBO:0060182"}


id: PR:O13644
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02839","PANTHER:PTHR19957:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein sed5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.14c","secondary_identifiers":["UniProtKB:O13644"],"synonyms":[{"name":"Spom972h-STX5","type":"exact"}],"termid":"PR:O13644"}


id: SO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of intronic sequence of the 3' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3_prime_UTR_variant","termid":"SO:0001624"},{"relation_name":"is_a","term_name":"coding_transcript_intron_variant","termid":"SO:0001969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3_prime_UTR_intron_variant","synonyms":[{"name":"3 prime UTR intron variant","type":"exact"}],"termid":"SO:0002090"}


id: PBO:0024798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-molecularly_controls","termid":"PBO:0024798"}


id: GO:0015899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of aminotriazole into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Aminotriazole is an effective weed killer that also possesses some antithyroid activity.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"aminotriazole transport","termid":"GO:0015899"}


id: GO:0043188
data:
  {"annotated_genes":["SJAG_01835"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103911],"is_not":false,"summary":null,"term":"GO:0043188"}]},"cv_name":"cellular_component","definition":"The cell wall material that surrounds the septum in fungal cells.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"fungal-type cell wall","termid":"GO:0009277"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"cell septum edging","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043188","terms_by_termid":{"GO:0043188":null}}


id: GO:0038185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a bile acid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:10334992","PMID:36409000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid signaling pathway","termid":"GO:0038183"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nuclear receptor-mediated bile acid signaling pathway","synonyms":[{"name":"BAR signaling pathway","type":"related"},{"name":"FXR signaling pathway","type":"exact"},{"name":"farnesoid X receptor signaling pathway","type":"exact"},{"name":"intracellular bile acid receptor signaling pathway","type":"exact"},{"name":"nuclear bile acid receptor signaling pathway","type":"related"}],"termid":"GO:0038185"}


id: PBO:0069584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 858, pseudogene","termid":"PBO:0069584"}


id: PR:O42935
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3201 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.11","synonyms":[{"name":"Spom972h-rpl3201","type":"exact"}],"termid":"PR:O42935"}


id: GO:0140367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An defense response against a bacteria mediated through an innate immune response. An innate immune response is mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["PMID:16177355","PMID:23006328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibacterial innate immune response","termid":"GO:0140367"}


id: GO:0020006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Tubular network of extensions from the symbiont-containing vacuole membrane that protrude into the host cytoplasm.","definition_xrefs":["PMID:3528173","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"symbiont-containing vacuole membrane","termid":"GO:0020005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"symbiont-containing vacuolar membrane network","synonyms":[{"name":"parasitophorous vacuolar membrane network","type":"exact"},{"name":"symbiont-containing vacuole membrane network","type":"exact"},{"name":"tubulovesicular network","type":"narrow"}],"termid":"GO:0020006"}


id: PBO:0004153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma1 (predicted)","termid":"PBO:0004153"}


id: GO:0051116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + Co(2+) + H2O + hydrogenobyrinate a,c-diamide = ADP + cob(II)yrinate a,c diamide + 4 H+ + phosphate.","definition_xrefs":["EC:6.6.1.2","RHEA:15341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"cobaltochelatase activity","secondary_identifiers":["KEGG_REACTION:R05227","MetaCyc:R342-RXN"],"synonyms":[{"name":"CobN-CobST","type":"related"},{"name":"CobNST","type":"narrow"},{"name":"hydrogenobyrinic acid a,c-diamide cobaltochelatase activity","type":"exact"},{"name":"hydrogenobyrinic-acid-a,c-diamide:cobalt cobalt-ligase (ADP-forming)","type":"related"}],"termid":"GO:0051116"}


id: PATO:0000110
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000110 drought sensitivity (obsolete PATO:0000110)","termid":"PATO:0000110"}


id: PBO:0070271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 6","termid":"PBO:0070271"}


id: GO:0032272
data:
  {"annotated_genes":["SJAG_00279","SJAG_01993","SJAG_01894","SJAG_02700","SJAG_04982"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110487,84292,88349,94980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[93798,110490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the process of creating protein polymers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"negatively_regulates","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein polymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein polymerization","type":"exact"},{"name":"down-regulation of protein polymerization","type":"exact"},{"name":"downregulation of protein polymerization","type":"exact"},{"name":"inhibition of protein polymerization","type":"narrow"}],"termid":"GO:0032272","terms_by_termid":{"GO:0042989":null,"GO:0051016":null}}


id: PBO:0055258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2685","termid":"PBO:0055258"}


id: PBO:0017553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit Sno1 (predicted)","termid":"PBO:0017553"}


id: GO:0042470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.","definition_xrefs":["GOC:jl","PMID:11584301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"melanosome","secondary_identifiers":["Wikipedia:Melanosome"],"termid":"GO:0042470"}


id: PBO:0013095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase snr1","termid":"PBO:0013095"}


id: PBO:0111751
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein","termid":"PBO:0111751"}


id: PBO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L24 (predicted)","termid":"PBO:0001973"}


id: GO:1903366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fear response.","definition_xrefs":["PMID:8677262","GOC:TermGenie","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of fear response","termid":"GO:1903365"},{"relation_name":"negatively_regulates","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fear response","synonyms":[{"name":"down regulation of fear response","type":"exact"},{"name":"down regulation of physiological fear response","type":"exact"},{"name":"down-regulation of fear response","type":"exact"},{"name":"down-regulation of physiological fear response","type":"exact"},{"name":"downregulation of fear response","type":"exact"},{"name":"downregulation of physiological fear response","type":"exact"},{"name":"inhibition of fear response","type":"narrow"},{"name":"inhibition of physiological fear response","type":"narrow"},{"name":"negative regulation of physiological fear response","type":"exact"}],"termid":"GO:1903366"}


id: GO:0033532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of stachyose, the tetrasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose family oligosaccharide biosynthetic process","termid":"GO:0010325"},{"relation_name":"is_a","term_name":"stachyose metabolic process","termid":"GO:0033531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"stachyose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5337"],"synonyms":[{"name":"stachyose anabolism","type":"exact"},{"name":"stachyose biosynthesis","type":"exact"},{"name":"stachyose formation","type":"exact"},{"name":"stachyose synthesis","type":"exact"}],"termid":"GO:0033532"}


id: GO:0035335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-tyrosine to form peptidyl-tyrosine.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dephosphorylation","termid":"GO:0035335"}


id: PBO:0080673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP homolog associated with actin, golgi membranes and microtubules","termid":"PBO:0080673"}


id: PBO:0055803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidic acid receptor 5","termid":"PBO:0055803"}


id: PBO:0080007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 pseudogene 2","termid":"PBO:0080007"}


id: GO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a collectin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"collectin receptor activity","termid":"GO:0001863"}


id: PBO:0003549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon-like protein Rtn1","termid":"PBO:0003549"}


id: GO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + H2O + NAD+ = pyruvate + NH3 + NADH + H+.","definition_xrefs":["EC:1.4.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"alanine dehydrogenase activity","secondary_identifiers":["MetaCyc:ALANINE-DEHYDROGENASE-RXN","RHEA:18405"],"synonyms":[{"name":"AlaDH","type":"related"},{"name":"L-alanine dehydrogenase activity","type":"related"},{"name":"L-alanine:NAD+ oxidoreductase (deaminating)","type":"related"},{"name":"NAD-dependent alanine dehydrogenase activity","type":"related"},{"name":"NAD-linked alanine dehydrogenase activity","type":"related"},{"name":"NADH-dependent alanine dehydrogenase activity","type":"related"},{"name":"alanine oxidoreductase activity","type":"related"},{"name":"alpha-alanine dehydrogenase activity","type":"related"}],"termid":"GO:0000286"}


id: PBO:0041166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG2 divergent transcript","termid":"PBO:0041166"}


id: SO:0001925
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA transcript, derived from the transcription of the telomere. These transcripts consist of C rich repeats.","definition_xrefs":["PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric_transcript","termid":"SO:0001927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARIA","termid":"SO:0001925"}


id: PBO:0062999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 6","termid":"PBO:0062999"}


id: PBO:0077412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM147 antisense RNA 1","termid":"PBO:0077412"}


id: PBO:0085538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S8, no bacterial homolog; RPS8B has a paralog, RPS8A, that arose from the whole genome duplication","termid":"PBO:0085538"}


id: PBO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain","termid":"PBO:0002557"}


id: GO:0097243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a flavonoid, a compound containing two or more aromatic rings, each bearing at least one aromatic hydroxyl and connected with a carbon bridge.","definition_xrefs":["GOC:sl","PMID:20599706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"flavonoid binding","termid":"GO:0097243"}


id: GO:0071025
data:
  {"annotated_genes":["SJAG_02382","SJAG_00961","SJAG_03454","SJAG_00854","SJAG_01331","SJAG_01412","SJAG_01540","SJAG_01529","SJAG_04153","SJAG_03745","SJAG_04198","SJAG_01191","SJAG_03179","SJAG_04360","SJAG_04321","SJAG_01867","SJAG_01830","SJAG_04586","SJAG_00701","SJAG_01431","SJAG_02622","SJAG_01717","SJAG_00456","SJAG_03984","SJAG_04084","SJAG_02275","SJAG_04768","SJAG_00425","SJAG_01702","SJAG_04006","SJAG_04500","SJAG_02879","SJAG_03883","SJAG_03047","SJAG_02621","SJAG_03939","SJAG_04601","SJAG_01521","SJAG_04574","SJAG_04025","SJAG_04824","SJAG_00452","SJAG_04818","SJAG_02723","SJAG_01176","SJAG_02720","SJAG_01818","SJAG_03680","SJAG_01064","SJAG_04283","SJAG_02005","SJAG_05243"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112211],"is_not":false,"summary":null,"term":"GO:0071025"},{"annotations":[85819],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[114294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180036"},{"annotations":[112060,85478,114482,92599,100522,102586,91005,89102,97128,98175,101380,111616,91971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071028"},{"annotations":[103590,89480,109428,114295,93318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[112512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[114296,86822,84873,88390,111721,91049,105929,105396,102430,83533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"},{"annotations":[88268,84409,98511,102389,110158,106631,114274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"},{"annotations":[111548,99103,88269,114297,95862,108913,108016,109429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"},{"annotations":[98177,101382,111618,88271,103592,112062,100524,89104,84410,91973,102588,93320,109430,114484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071035"},{"annotations":[109431,88272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"},{"annotations":[109432,88273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"},{"annotations":[103593,114298,86664,93321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071027"},{"annotations":[95179,86897,107452,83534,88274,100424,105377,105397,87887,92798,103595,86823,114299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033621"},{"annotations":[102777],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120272"},{"annotations":[91007,111713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180037"},{"annotations":[88278,91977,109435,111621,112065,114487,93326,89108,98181,102592,103599,100527,101385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071038"},{"annotations":[91008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106354"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant RNAs.","definition_xrefs":["GOC:krc","PMID:18644474","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic 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surveillance","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA quality control","type":"exact"},{"name":"aberrant RNA catabolic process","type":"exact"}],"termid":"GO:0071025","terms_by_termid":{"GO:0033621":null,"GO:0071025":null,"GO:0071027":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0071035":null,"GO:0071036":null,"GO:0071037":null,"GO:0071038":null,"GO:0071039":null,"GO:0071040":null,"GO:0106354":null,"GO:0120271":null,"GO:0120272":null,"GO:0180036":null,"GO:0180037":null}}


id: GO:1904541
data:
  {"annotated_genes":["SJAG_03444","SJAG_03646","SJAG_01017","SJAG_02718","SJAG_01888","SJAG_00667","SJAG_05001","SJAG_01171"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84316,85127,90067,96235,98040,98041,104208,107469],"is_not":false,"summary":null,"term":"GO:1904541"}]},"cv_name":"biological_process","definition":"Any fungal-type cell wall disassembly that is involved in conjugation with cellular fusion.","definition_xrefs":["GO_REF:0000060","PMID:25825517","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization involved in conjugation with cellular fusion","termid":"GO:0070871"},{"relation_name":"is_a","term_name":"fungal-type cell wall disassembly","termid":"GO:0071853"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02718":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0000747"],"is_obsolete":false,"name":"fungal-type cell wall disassembly involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall disassembly involved in cell fusion","type":"related"},{"name":"fungal-type cell wall disassembly involved in mating","type":"related"}],"termid":"GO:1904541","terms_by_termid":{"GO:1904541":null}}


id: GO:0046972
data:
  {"annotated_genes":["SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95052],"is_not":false,"summary":null,"term":"GO:0046972"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 16) = CoA + histone H4 N6-acetyl-L-lysine (position 16). This reaction represents the addition of an acetyl group to the lysine at position 16 of histone H4.","definition_xrefs":["PMID:19056256","PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0140096","GO:0003824","GO:0016740","GO:0034212"],"is_obsolete":false,"name":"histone H4K16 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.48"],"synonyms":[{"name":"histone acetylase activity (H4-K16 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K16 specific)","type":"exact"},{"name":"histone lysine acetyltransferase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0046972","terms_by_termid":{"GO:0046972":null}}


id: PBO:0108991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilizer of axonemal microtubules 3","termid":"PBO:0108991"}


id: PBO:0063686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pepsinogen B, pseudogene","termid":"PBO:0063686"}


id: FYPO:0005671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal in a population that is exposed to methyl methanesulfonate. The septation index is the proportion of the population undergoing septation at any given time.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased septation index","termid":"FYPO:0000650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased septation index during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased septation index during cellular response to MMS","type":"exact"},{"name":"increased septation index in response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005671"}


id: SO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A FRE is an enhancer element necessary and sufficient to confer filamentation associated expression in S. cerevisiae.","definition_xrefs":["PMID:1489142","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enhancer_binding_site","termid":"SO:0001461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRE","synonyms":[{"name":"filamentation and invasion response element","type":"exact"}],"termid":"SO:0002046"}


id: GO:0044479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of blood mast cell degranulation in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:21549739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of mast cell degranulation in another organism","synonyms":[{"name":"envenomation resulting in modulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0044479"}


id: GO:0055095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of a lipoprotein particle.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"lipoprotein particle mediated signaling","synonyms":[{"name":"lipoprotein mediated signalling","type":"exact"},{"name":"lipoprotein particle mediated signal transduction","type":"exact"},{"name":"lipoprotein particle-mediated signaling","type":"exact"}],"termid":"GO:0055095"}


id: PBO:0081291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 74","termid":"PBO:0081291"}


id: GO:0160039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when the biogenic amine serotonin has been bound by the channel complex or one of its constituent parts. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["PMID:11100728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"serotonin receptor activity","termid":"GO:0099589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0038023","GO:0022857"],"is_obsolete":false,"name":"serotonin-gated chloride channel activity","secondary_identifiers":["TC:1.A.9","Wikipedia:Ligand-gated_ion_channel"],"termid":"GO:0160039"}


id: PBO:0088660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 7, Pre10","termid":"PBO:0088660"}


id: GO:0014072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isoquinoline alkaloid","termid":"GO:0014072"}


id: PATO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A turgor which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"turgor","termid":"PATO:0001620"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased turgor","synonyms":[{"name":"high turgor","type":"exact"}],"termid":"PATO:0001622"}


id: PBO:0048435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi brefeldin A resistant guanine nucleotide exchange factor 1","termid":"PBO:0048435"}


id: PBO:0044334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 17","termid":"PBO:0044334"}


id: GO:0043210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to alkanesulfonates, the anion of alkanesulfonic acids, sulfonic acid derivatives containing an aliphatic hydrocarbon group.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alkanesulfonate binding","termid":"GO:0043210"}


id: PBO:0067269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 343, pseudogene","termid":"PBO:0067269"}


id: PBO:0082558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ceramide-activated, type 2A-related serine-threonine phosphatase; functions in G1/S transition of mitotic cycle; controls lifespan, mitochondrial function, cell cycle progression by regulating HXK2 phosphorylation; regulator of COPII coat dephosphorylation; required for ER to Golgi traffic; interacts with Hrr25p kinase; cytoplasmic and nuclear protein that modulates functions mediated by Pkc1p including cell wall and actin cytoskeleton organization; similar to human PP6","termid":"PBO:0082558"}


id: PBO:0051429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-9","termid":"PBO:0051429"}


id: FYECO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which pantothenate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ pantothenate","termid":"FYECO:0000188"}


id: PBO:0048508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 9","termid":"PBO:0048508"}


id: PBO:0087291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silenced copy of ALPHA2 at HML; homeobox-domain protein that associates with Mcm1p in haploid cells to repress a-specific gene expression and interacts with a1p in diploid cells to repress haploid-specific gene expression","termid":"PBO:0087291"}


id: GO:0072540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper 17 cell, a CD4-positive, alpha-beta T cell with the phenotype RORgamma-t-positive that produces IL-17.","definition_xrefs":["GOC:ebc","GOC:BHF","CL:0000899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell lineage commitment","termid":"GO:0002295"},{"relation_name":"part_of","term_name":"T-helper 17 cell differentiation","termid":"GO:0072539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 cell lineage commitment","synonyms":[{"name":"T-helper 17 cell fate commitment","type":"exact"},{"name":"Th17 cell lineage commitment","type":"exact"},{"name":"Th17 fate commitment","type":"exact"}],"termid":"GO:0072540"}


id: PBO:0034063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-kills","termid":"PBO:0034063"}


id: GO:0043003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transport of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Golgi to plasma membrane CFTR protein transport (obsolete GO:0043003)","synonyms":[{"name":"activation of Golgi to plasma membrane CFTR protein transport","type":"narrow"},{"name":"stimulation of Golgi to plasma membrane CFTR protein transport","type":"narrow"},{"name":"up regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"up-regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"upregulation of Golgi to plasma membrane CFTR protein transport","type":"exact"}],"termid":"GO:0043003"}


id: GO:1905742
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of Ras guanyl-nucleotide exchange factor activity.","definition_xrefs":["GOC:rjd","GO_REF:0000088","GOC:TermGenie","PMID:20493808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Ras guanyl-nucleotide exchange factor complex","termid":"GO:1905742"}


id: PBO:0052062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 2B","termid":"PBO:0052062"}


id: PBO:0060494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylneuraminate synthase","termid":"PBO:0060494"}


id: GO:0099119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-demethylubiquinol-8 = S-adenosyl-L-homocysteine + ubiquinol-8.","definition_xrefs":["GOC:ic"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-demethylubiquinol-8 3-O-methyltransferase activity (obsolete GO:0099119)","termid":"GO:0099119"}


id: FYPO:0002719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell septum is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to septum","termid":"FYPO:0002718"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to septum","synonyms":[{"name":"decreased protein localisation to septum","type":"exact"},{"name":"decreased protein localization to cell septum","type":"exact"},{"name":"decreased protein localization to division septum","type":"exact"},{"name":"decreased protein localization to septum during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to septum during vegetative growth","type":"exact"},{"name":"reduced protein localization to septum","type":"exact"}],"termid":"FYPO:0002719"}


id: GO:0004025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+, requiring the presence of iron.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol dehydrogenase (NAD+) activity, iron-dependent (obsolete GO:0004025)","synonyms":[{"name":"alcohol dehydrogenase activity, iron-dependent","type":"broad"}],"termid":"GO:0004025"}


id: PBO:0012227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit (predicted)","termid":"PBO:0012227"}


id: PBO:0042217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNO divergent transcript","termid":"PBO:0042217"}


id: GO:0033544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on even-numbered carbons are degraded. In this pathway, the intermediate 2,4-dienoyl-CoA is converted to cis-2-enoyl-CoA through one more cycle of the core beta-oxidation pathway. Cis-2-enoyl-CoA cannot be completely degraded via the core beta-oxidation pathway because hydratation of cis-2-enoyl-CoA yields D-3-hydroxyacyl-CoA, which is not a substrate for 3-hydroxylacyl-CoA dehydrogenase. Cis-2-enoyl-CoA must enter the so-called epimerase pathway, which involves converting D-3-hydroxyacyl-CoA to L-3-hydroxyacyl-CoA by 3-hydroxylacyl-CoA epimerase or by two stereo-specific enoyl-CoA hydratases. L-3-hydroxyacyl-CoA then returns to the core beta-oxidation pathway. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["MetaCyc:PWY-5138","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation, unsaturated, even number","termid":"GO:0033542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, even number, epimerase pathway","termid":"GO:0033544"}


id: PBO:0003321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad22 homolog Rti1","termid":"PBO:0003321"}


id: PBO:0076675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1","termid":"PBO:0076675"}


id: GO:0009100
data:
  {"annotated_genes":["SJAG_00183","SJAG_00924","SJAG_04316","SJAG_00831","SJAG_00437","SJAG_02163","SJAG_01595","SJAG_04127","SJAG_04728","SJAG_04954","SJAG_03764","SJAG_00334","SJAG_02783","SJAG_04401","SJAG_03535","SJAG_05219","SJAG_03056","SJAG_03330","SJAG_04363","SJAG_00554","SJAG_01021","SJAG_03676","SJAG_04090","SJAG_02996","SJAG_00394","SJAG_00816","SJAG_03333","SJAG_02519","SJAG_03871","SJAG_04821","SJAG_03774","SJAG_01069","SJAG_04571","SJAG_01006","SJAG_04952","SJAG_04770","SJAG_03149","SJAG_03082","SJAG_00747","SJAG_03188","SJAG_00598","SJAG_04231","SJAG_01950","SJAG_02102","SJAG_01858","SJAG_03280","SJAG_03790","SJAG_03555","SJAG_02056","SJAG_04053","SJAG_03150","SJAG_01276","SJAG_04906","SJAG_01264","SJAG_02648","SJAG_01491","SJAG_02903","SJAG_03311","SJAG_04095","SJAG_01389","SJAG_01972","SJAG_03032","SJAG_05348","SJAG_03656"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93962,101068,100631,96854,83541,105160,102081,114558,101184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"},{"annotations":[96081,94476,86405,61007,94765,99894,101120,87150,102842,107235,112926,95874,94425,89940,108714,98401,99689,105431,92488],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[89584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"},{"annotations":[83542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009101"},{"annotations":[89586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006058"},{"annotations":[83415,109929,114699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006491"},{"annotations":[104527,96116,91767,93853,109930,110126,112263,114016,104152],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006486"},{"annotations":[94854,89179,114230,96855,101185,94852,106861,100632,108858,113501,94853,98895,107055,89181,114559,94844,97433,95006,98822,102082,85237,83543,89180,89182,94851,106855,95733,105161],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006487"},{"annotations":[96419,91377,94858,101069,94834,89186,107236,113033,98674,114231,94856,93963,96082,109931,89183,89185,94837,83544,94855,97442,94857,94836,89184,105432,94835],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0018279"},{"annotations":[96856,106862,98823,101888,100205,100633,106856,94845,114232],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006493"},{"annotations":[102083,89063,97631],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035269"},{"annotations":[91768,89587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01858":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03280":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03535":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoprotein metabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycoprotein metabolism","type":"exact"}],"termid":"GO:0009100","terms_by_termid":{"GO:0000032":null,"GO:0006058":null,"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006491":null,"GO:0006493":null,"GO:0009101":null,"GO:0018279":null,"GO:0035269":null,"GO:0097466":null,"GO:1904380":null}}


id: PBO:0014248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint ubiquitin ligase Dma1","termid":"PBO:0014248"}


id: GO:0015195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-threonine from one side of a membrane to the other. L-threonine is (2R*,3S*)-2-amino-3-hydroxybutanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-threonine transmembrane transporter activity","secondary_identifiers":["GO:0015512"],"synonyms":[{"name":"L-threonine permease activity","type":"related"},{"name":"L-threonine transporter activity","type":"broad"},{"name":"threonine/serine:sodium symporter activity","type":"related"}],"termid":"GO:0015195"}


id: PBO:0043934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytotoxic and regulatory T cell molecule","termid":"PBO:0043934"}


id: PBO:0031644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_septation","termid":"PBO:0031644"}


id: GO:0060575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell of the intestine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell differentiation","termid":"GO:0060575"}


id: PBO:0038490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 1","termid":"PBO:0038490"}


id: PBO:0046452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor receptor pathway substrate 8","termid":"PBO:0046452"}


id: RO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c involved in regulation of p if c is involved in some 'p' and p' regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"RO:0002263"},{"relation_name":"is_a","term_name":"involved_in_or_involved_in_regulation_of","termid":"RO:0002431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_regulation_of","termid":"RO:0002428"}


id: FYPO:0002544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) does not occur during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation at RxxS site during cellular response to hydrogen peroxide (obsolete FYPO:0002544)","synonyms":[{"name":"abolished protein serine phosphorylation at Arg-X-X-Ser site during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein serine phosphorylation at PAS site during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to H2O2","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at arginine-X-X-serine site during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein serine phosphorylation at phospho-Akt site during cellular response to hydrogen peroxide","type":"exact"},{"name":"protein serine phosphorylation abolished at RxxS site during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002544"}


id: GO:0048185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to activin, a dimer of inhibin-beta subunits.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"activin binding","termid":"GO:0048185"}


id: PBO:0090989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk15","termid":"PBO:0090989"}


id: PBO:0071704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 2","termid":"PBO:0071704"}


id: GO:0034141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 3 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 3 signaling pathway","termid":"GO:0034139"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 3 signaling pathway","termid":"GO:0034138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 3 signaling pathway","synonyms":[{"name":"positive regulation of TLR3 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 3 signalling pathway","type":"exact"}],"termid":"GO:0034141"}


id: GO:0061286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric capsule are generated and organized. The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule morphogenesis","termid":"GO:0072128"},{"relation_name":"part_of","term_name":"mesonephric capsule development","termid":"GO:0061285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule morphogenesis","termid":"GO:0061286"}


id: GO:0060855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of venous endothelial cells out of the veins giving rise to the precursors of lymphatic endothelial cells.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"},{"relation_name":"part_of","term_name":"lymph vessel development","termid":"GO:0001945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous endothelial cell migration involved in lymph vessel development","termid":"GO:0060855"}


id: PBO:0079841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-5 netrin receptor D","termid":"PBO:0079841"}


id: GO:0036213
data:
  {"annotated_genes":["SJAG_04887","SJAG_04498","SJAG_04077","SJAG_01894","SJAG_03703","SJAG_02700","SJAG_04597","SJAG_03379","SJAG_04776","SJAG_03631","SJAG_00268","SJAG_00845","SJAG_02645","SJAG_03936","SJAG_02431","SJAG_03581","SJAG_01665"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91340,108465,97023,84295,94109,93723,114070,98526,94984,96792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902404"},{"annotations":[99819],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[90627,106669,109526,83573,90457],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[77049],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031991"}]},"cv_name":"biological_process","definition":"The process of an actomyosin ring getting smaller in diameter.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00268":null,"SJAG_00845":null,"SJAG_01665":null,"SJAG_01894":null,"SJAG_02431":null,"SJAG_02645":null,"SJAG_02700":null,"SJAG_03379":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03703":null,"SJAG_03936":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"contractile ring contraction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"contractile ring constriction","type":"exact"}],"termid":"GO:0036213","terms_by_termid":{"GO:0031991":null,"GO:1902404":null,"GO:1903472":null,"GO:1903473":null}}


id: PBO:0072978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2B member 2","termid":"PBO:0072978"}


id: GO:1901756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving butirosin.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"butirosin metabolic process","synonyms":[{"name":"butirosin metabolism","type":"exact"}],"termid":"GO:1901756"}


id: FYPO:0003565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during meiotic cell cycle","termid":"FYPO:0006765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased protein phosphorylation during meiosis I","synonyms":[{"name":"increased protein phosphorylation during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003565"}


id: PATO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000093 chemical sensitivity (obsolete PATO:0000093)","termid":"PATO:0000093"}


id: PBO:0051836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunity related GTPase cinema","termid":"PBO:0051836"}


id: PBO:0052882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-4","termid":"PBO:0052882"}


id: GO:1904394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle acetylcholine-gated channel clustering.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:7722643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of receptor clustering","termid":"GO:1903910"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle acetylcholine-gated channel clustering","termid":"GO:1904393"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle acetylcholine-gated channel clustering","termid":"GO:0071340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle acetylcholine-gated channel clustering","synonyms":[{"name":"down regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"down regulation of skeletal muscle acetylcholine-gated channel clustering","type":"exact"},{"name":"down regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"},{"name":"down-regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"down-regulation of skeletal muscle acetylcholine-gated channel clustering","type":"exact"},{"name":"down-regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"},{"name":"downregulation of skeletal muscle AChR clustering","type":"exact"},{"name":"downregulation of skeletal muscle acetylcholine-gated channel clustering","type":"exact"},{"name":"downregulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"},{"name":"inhibition of skeletal muscle AChR clustering","type":"narrow"},{"name":"inhibition of skeletal muscle acetylcholine-gated channel clustering","type":"narrow"},{"name":"inhibition of skeletal muscle nicotinic acetylcholine receptor clustering","type":"narrow"},{"name":"negative regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"negative regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"}],"termid":"GO:1904394"}


id: PATO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000179 body position (obsolete PATO:0000179)","termid":"PATO:0000179"}


id: PBO:0065852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 3","termid":"PBO:0065852"}


id: PBO:0109054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIB1 associated lncRNA","termid":"PBO:0109054"}


id: PBO:0047463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 4","termid":"PBO:0047463"}


id: PBO:0031040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endomembrane_system_organization","termid":"PBO:0031040"}


id: SO:0000272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a tyrosine anticodon, and a 3' tyrosine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tyrosine_tRNA_primary_transcript","termid":"SO:0000229"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl_tRNA","synonyms":[{"name":"tyrosyl tRNA","type":"exact"},{"name":"tyrosyl-transfer RNA","type":"related"},{"name":"tyrosyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000272"}


id: GO:0042656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the phosphorylation and activation of JUN kinase kinase kinases (JNKKKs).","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAP kinase kinase kinase kinase activity","termid":"GO:0008349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824","GO:0004672","GO:0140096"],"is_obsolete":false,"name":"JUN kinase kinase kinase kinase activity","synonyms":[{"name":"JUNKKKK activity","type":"exact"}],"termid":"GO:0042656"}


id: PBO:0036446
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no evidence for translation from proteomics, synteny, or ribosome profiling","termid":"PBO:0036446"}


id: PBO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by MBF complex","termid":"PBO:0001302"}


id: GO:1903845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to transforming growth factor beta stimulus.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:22269326","GO_REF:0000058","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cellular response to transforming growth factor beta stimulus","termid":"GO:1903844"},{"relation_name":"negatively_regulates","term_name":"cellular response to transforming growth factor beta stimulus","termid":"GO:0071560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to transforming growth factor beta stimulus","synonyms":[{"name":"down regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"down regulation of cellular response to TGFbeta stimulus","type":"exact"},{"name":"down regulation of cellular response to transforming growth factor beta stimulus","type":"exact"},{"name":"down-regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"down-regulation of cellular response to TGFbeta stimulus","type":"exact"},{"name":"down-regulation of cellular response to transforming growth factor beta stimulus","type":"exact"},{"name":"downregulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"downregulation of cellular response to TGFbeta stimulus","type":"exact"},{"name":"downregulation of cellular response to transforming growth factor beta stimulus","type":"exact"},{"name":"inhibition of cellular response to TGF-beta stimulus","type":"narrow"},{"name":"inhibition of cellular response to TGFbeta stimulus","type":"narrow"},{"name":"inhibition of cellular response to transforming growth factor beta stimulus","type":"narrow"},{"name":"negative regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"negative regulation of cellular response to TGFbeta stimulus","type":"exact"}],"termid":"GO:1903845"}


id: GO:0036208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of expression of a histone-encoding gene. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein.","definition_xrefs":["GOC:bf","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone gene expression (obsolete GO:0036208)","synonyms":[{"name":"down-regulation of histone gene expression","type":"exact"},{"name":"downregulation of histone gene expression","type":"exact"},{"name":"inhibition of histone gene expression","type":"narrow"},{"name":"negative regulation of expression of histone-encoding gene","type":"exact"}],"termid":"GO:0036208"}


id: GO:0090328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of olfactory learning. Olfactory learning is any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"olfactory learning","termid":"GO:0008355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olfactory learning","termid":"GO:0090328"}


id: PBO:0082844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII vesicle coat protein required for ER transport vesicle budding; essential factor in endoplasmic reticulum exit site (ERES) formation, as well as in COPII-mediated ER-to-Golgi traffic; bound to periphery of ER membranes and may act to stabilize initial COPII complexes; interacts with Sec23p, Sec24p and Sec31p","termid":"PBO:0082844"}


id: PBO:0071924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 1","termid":"PBO:0071924"}


id: SO:0000037
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA region that includes DNAse hypersensitive sites located near a gene that confers the high-level, position-independent, and copy number-dependent expression to that gene.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"locus_control_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Locus_control_region"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:locus_control_region","type":"exact"},{"name":"LCR","type":"exact"},{"name":"locus control element","type":"related"},{"name":"locus control region","type":"exact"}],"termid":"SO:0000037"}


id: PBO:0041027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'), 5'-bisphosphate nucleotidase 2","termid":"PBO:0041027"}


id: PBO:0090173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K37 methyltransferase Set7","termid":"PBO:0090173"}


id: PBO:0065614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A2","termid":"PBO:0065614"}


id: GO:0047720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (indol-3-yl)acetaldehyde oxime = (indol-3-yl)acetonitrile + H2O.","definition_xrefs":["RHEA:23156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indoleacetaldoxime dehydratase activity","secondary_identifiers":["KEGG_REACTION:R04093","MetaCyc:RXN-19838","EC:4.8.1.3"],"synonyms":[{"name":"(indol-3-yl)acetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"3-indoleacetaldoxime hydro-lyase activity","type":"exact"},{"name":"indole-3-acetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"indole-3-acetaldoxime hydro-lyase activity","type":"exact"},{"name":"indoleacetaldoxime hydro-lyase activity","type":"exact"}],"termid":"GO:0047720"}


id: GO:0015377
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in).","definition_xrefs":["PMID:31747317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"},{"relation_name":"is_a","term_name":"monoatomic anion:monoatomic cation symporter activity","termid":"GO:0015296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chloride:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:2.A.30"],"synonyms":[{"name":"cation:chloride cotransporter activity","type":"broad"},{"name":"cation:chloride symporter activity","type":"broad"}],"termid":"GO:0015377","terms_by_termid":{"GO:0015379":null}}


id: GO:0098763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"One of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitotic cell cycle phase","termid":"GO:0098763"}


id: PBO:0087418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 8 of the F0 sector of mitochondrial F1F0 ATP synthase; encoded on the mitochondrial genome; ATP8 and ATP6 mRNAs are not translated in the absence of the F1 sector of ATPase","termid":"PBO:0087418"}


id: PBO:0090393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD finger protein Cph1","termid":"PBO:0090393"}


id: PBO:0087714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential protein","termid":"PBO:0087714"}


id: PBO:0084759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial membrane protein; not required for respiratory growth but causes a synthetic respiratory defect in combination with rmd9 mutations; transcriptionally up-regulated by TOR; deletion increases life span; YBR238C has a paralog, RMD9, that arose from the whole genome duplication","termid":"PBO:0084759"}


id: PBO:0014267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class-III, possible transaminase, unknown specificity","termid":"PBO:0014267"}


id: GO:0030784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 3'-hydroxy-N-methyl-(S)-coclaurine = S-adenosyl-L-homocysteine + (S)-reticuline.","definition_xrefs":["EC:2.1.1.116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.116-RXN","RHEA:17789"],"synonyms":[{"name":"S-adenosyl-L-methionine:3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase activity","type":"related"}],"termid":"GO:0030784"}


id: PBO:0087067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L33A; N-terminally acetylated; rpl33a null mutant exhibits slow growth while rpl33a rpl33b double null mutant is inviable; homologous to mammalian ribosomal protein L35A, no bacterial homolog; RPL33A has a paralog, RPL33B, that arose from the whole genome duplication","termid":"PBO:0087067"}


id: GO:0046970
data:
  {"annotated_genes":["SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100321],"is_not":false,"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.","definition_xrefs":["GOC:vw","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone deacetylase activity","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H4K16 deacetylase activity","termid":"GO:0034739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0019213","GO:0033558","GO:0016787","GO:0003824","GO:0140096","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"NAD-dependent histone H4K16 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.1.98"],"synonyms":[{"name":"NAD-dependent histone H4-K16 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0046970","terms_by_termid":{"GO:0046970":null}}


id: GO:1902372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA catabolic process.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of tRNA catabolic process","termid":"GO:1902370"},{"relation_name":"is_a","term_name":"positive regulation of tRNA metabolic process","termid":"GO:1903328"},{"relation_name":"positively_regulates","term_name":"tRNA decay","termid":"GO:0016078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"positively_regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tRNA catabolic process","synonyms":[{"name":"activation of tRNA breakdown","type":"narrow"},{"name":"activation of tRNA catabolic process","type":"narrow"},{"name":"activation of tRNA catabolism","type":"narrow"},{"name":"activation of tRNA degradation","type":"narrow"},{"name":"positive regulation of tRNA breakdown","type":"exact"},{"name":"positive regulation of tRNA catabolism","type":"exact"},{"name":"positive regulation of tRNA degradation","type":"exact"},{"name":"up regulation of tRNA breakdown","type":"exact"},{"name":"up regulation of tRNA catabolic process","type":"exact"},{"name":"up regulation of tRNA catabolism","type":"exact"},{"name":"up regulation of tRNA degradation","type":"exact"},{"name":"up-regulation of tRNA breakdown","type":"exact"},{"name":"up-regulation of tRNA catabolic process","type":"exact"},{"name":"up-regulation of tRNA catabolism","type":"exact"},{"name":"up-regulation of tRNA degradation","type":"exact"},{"name":"upregulation of tRNA breakdown","type":"exact"},{"name":"upregulation of tRNA catabolic process","type":"exact"},{"name":"upregulation of tRNA catabolism","type":"exact"},{"name":"upregulation of tRNA degradation","type":"exact"}],"termid":"GO:1902372"}


id: PBO:0091548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog Cbh1, domesticated transposable element","termid":"PBO:0091548"}


id: GO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A contractile ring, i.e. a cytoskeletal structure composed of actin filaments and myosin, that forms beneath the plasma membrane at the mother-bud neck in mitotic cells that divide by budding in preparation for completing cytokinesis. An example of this structure is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic actomyosin contractile ring","termid":"GO:0110085"},{"relation_name":"part_of","term_name":"cellular bud neck","termid":"GO:0005935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0070938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0070938","GO:0005575","GO:0005938","GO:0015629","GO:0005737"],"is_obsolete":false,"name":"cellular bud neck contractile ring","synonyms":[{"name":"neck ring","type":"exact"}],"termid":"GO:0000142"}


id: GO:0032968
data:
  {"annotated_genes":["SJAG_02551","SJAG_03118","SJAG_01149","SJAG_01151","SJAG_03967","SJAG_00150","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91864,99171,101491,102164,105176,111468,113183],"is_not":false,"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription, elongation","termid":"GO:0032786"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase II","termid":"GO:0034243"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"positively_regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_02551":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090040"],"synonyms":[{"name":"positive regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0032968","terms_by_termid":{"GO:0032968":null}}


id: PBO:0051701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase A","termid":"PBO:0051701"}


id: FYPO:0006122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein methylation during vegetative growth","synonyms":[{"name":"abnormal protein methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006122"}


id: GO:0033925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of the N,N'-diacetylchitobiosyl unit in high-mannose glycopeptides and glycoproteins containing the -[Man(GlcNAc)2]Asn-structure. One N-acetyl-D-glucosamine residue remains attached to the protein; the rest of the oligosaccharide is released intact.","definition_xrefs":["EC:3.2.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.96-RXN","Reactome:R-HSA-8853379"],"synonyms":[{"name":"N,N'-diacetylchitobiosyl beta-N-acetylglucosaminidase activity","type":"related"},{"name":"di-N-acetylchitobiosyl beta-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-N-acetyl-beta-D-glucosaminidase activity","type":"related"},{"name":"endo-N-acetyl-beta-glucosaminidase activity","type":"related"},{"name":"endo-beta-(1->4)-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase D activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase F activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase H activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase L activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-beta-acetylglucosaminidase activity","type":"related"},{"name":"endoglycosidase H activity","type":"related"},{"name":"endoglycosidase S activity","type":"related"},{"name":"glycopeptide-D-mannosyl-4-N-(N-acetyl-D-glucosaminyl)2-asparagine 1,4-N-acetyl-beta-glucosaminohydrolase activity","type":"related"},{"name":"glycopeptide-D-mannosyl-N4-(N-acetyl-D-glucosaminyl)2-asparagine 1,4-N-acetyl-beta-glucosaminohydrolase activity","type":"related"},{"name":"mannosyl-glycoprotein 1,4-N-acetamidodeoxy-beta-D-glycohydrolase activity","type":"related"},{"name":"mannosyl-glycoprotein endo-beta-N-acetylglucosamidase activity","type":"related"}],"termid":"GO:0033925"}


id: GO:1902792
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of pyrroline-5-carboxylate reductase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000088","PMID:2722838","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase complex","termid":"GO:1902792"}


id: GO:0050901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transient adhesive interactions between leukocytes and endothelial cells lining blood vessels. Carbohydrates on circulating leukocytes bind selectins on the vessel wall causing the leukocytes to slow down and roll along the inner surface of the vessel wall. During this rolling motion, transitory bonds are formed and broken between selectins and their ligands. Typically the first step in cellular extravasation (the movement of leukocytes out of the circulatory system, towards the site of tissue damage or infection).","definition_xrefs":["PMID:8600538","Wikipedia:Leukocyte_extravasation","PMID:7507411","GOC:bf","PMID:14708592","ISBN:0781735149","PMID:14680625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"leukocyte tethering or rolling","termid":"GO:0050901"}


id: GO:0014743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle system process","termid":"GO:0090257"},{"relation_name":"regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle hypertrophy","termid":"GO:0014743"}


id: PBO:0056061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 1","termid":"PBO:0056061"}


id: GO:0007002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete centromere binding (obsolete GO:0007002)","synonyms":[{"name":"centromere binding","type":"exact"}],"termid":"GO:0007002"}


id: PBO:0074244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 1","termid":"PBO:0074244"}


id: PBO:0003150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-AN1 type","termid":"PBO:0003150"}


id: PBO:0080405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS35 pseudogene 1","termid":"PBO:0080405"}


id: PBO:0075573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPIN2 family pseudogene 1","termid":"PBO:0075573"}


id: PBO:0017663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, human WDR24 family, Sea2 (predicted)","termid":"PBO:0017663"}


id: GO:0019614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound catabolic process","synonyms":[{"name":"catechol breakdown","type":"related"},{"name":"catechol catabolic process","type":"related"},{"name":"catechol catabolism","type":"related"},{"name":"catechol degradation","type":"related"}],"termid":"GO:0019614"}


id: PBO:0071759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 6","termid":"PBO:0071759"}


id: GO:1901951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterograde dense core granule transport.","definition_xrefs":["PMID:23358451","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"is_a","term_name":"regulation of dense core granule transport","termid":"GO:1904809"},{"relation_name":"regulates","term_name":"anterograde neuronal dense core vesicle transport","termid":"GO:1990048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of anterograde dense core granule transport","termid":"GO:1901951"}


id: GO:1900847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of naphtho-gamma-pyrone biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900846"},{"relation_name":"negatively_regulates","term_name":"naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of naphtho-gamma-pyrone biosynthetic process","synonyms":[{"name":"down regulation of naphtho-gamma-pyrone biosynthetic process","type":"exact"},{"name":"down-regulation of naphtho-gamma-pyrone biosynthetic process","type":"exact"},{"name":"downregulation of naphtho-gamma-pyrone biosynthetic process","type":"exact"},{"name":"inhibition of naphtho-gamma-pyrone biosynthetic process","type":"narrow"}],"termid":"GO:1900847"}


id: GO:0098690
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses glycine as a neurotransmitter.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glycinergic synapse","termid":"GO:0098690"}


id: GO:0071314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cocaine","termid":"GO:0042220"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cocaine","termid":"GO:0071314"}


id: FYPO:0005565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of microtubule bundles is abnormal when the cell undergoes transition from G0 phase to G1.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"abnormal microtubule bundle during G0 to G1 transition","synonyms":[{"name":"abnormal MT bundle during G0 to G1 transition","type":"exact"},{"name":"abnormal microtubule array during G0 to G1 transition","type":"related"},{"name":"abnormal microtubule bundle during cell cycle re-entry","type":"exact"},{"name":"abnormal microtubule bundle during cell quiescence to G1 transition","type":"exact"},{"name":"abnormal microtubule bundle during exit from cell quiescence","type":"exact"},{"name":"abnormal microtubule bundle during quiescence to G1 transition","type":"exact"},{"name":"abnormal microtubule bundle during recovery from quiescence","type":"exact"},{"name":"abnormal microtubule bundle physical object quality during G0 to G1 transition","type":"exact"}],"termid":"FYPO:0005565"}


id: GO:1990940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of one microtubule along another microtubule involved in mitotic spindle elongation.","definition_xrefs":["PMID:19686686"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule sliding involved in mitotic spindle elongation (obsolete GO:1990940)","termid":"GO:1990940"}


id: PBO:0091076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III synthase Ups","termid":"PBO:0091076"}


id: PBO:0029816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_abnormal_cell_shape","termid":"PBO:0029816"}


id: PBO:0067639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 812, pseudogene","termid":"PBO:0067639"}


id: PBO:0068345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 121","termid":"PBO:0068345"}


id: PATO:0001356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a cell by virtue of the bearer's ability to take on two or more different shapes during its life cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleomorphic","termid":"PATO:0001356"}


id: FYPO:0002952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of S-methyl-L-ergothioneine measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased S-methyl-L-ergothioneine level during G0","synonyms":[{"name":"increased S-methyl-L-ergothioneine accumulation during G0","type":"related"},{"name":"increased S-methyl-L-ergothioneine level during cell quiescence","type":"exact"},{"name":"increased S-methyl-L-ergothioneine level during quiescence","type":"exact"}],"termid":"FYPO:0002952"}


id: PBO:0064624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C like domain containing 1","termid":"PBO:0064624"}


id: GO:0060491
data:
  {"annotated_genes":["SJAG_03453","SJAG_04509","SJAG_02379","SJAG_00514","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107517,85900,83929,89514,86876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell projection assembly.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"cell projection assembly","termid":"GO:0030031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection formation","type":"related"}],"termid":"GO:0060491","terms_by_termid":{"GO:1902917":null}}


id: GO:0032116
data:
  {"annotated_genes":["SJAG_04508","SJAG_00682","SJAG_02606","SJAG_00796"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85705,92299],"is_not":false,"summary":null,"term":"GO:0032116"},{"annotations":[92298,85704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090694"},{"annotations":[83903,106695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090695"}]},"cv_name":"cellular_component","definition":"A protein complex required for the loading of a structural maintenance of chromosome (SMC) complex, such as cohesin, condensin or SMC5/SMC6, onto DNA. Appears to be eukaryotically conserved.","definition_xrefs":["GOC:curators","PMID:10882066","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00682":null,"SJAG_00796":null,"SJAG_02606":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SMC loading complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SCC2/SCC4 loading complex","type":"narrow"},{"name":"chromatin loading complex","type":"related"},{"name":"cohesin loading complex","type":"narrow"}],"termid":"GO:0032116","terms_by_termid":{"GO:0032116":null,"GO:0090694":null,"GO:0090695":null}}


id: PBO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, somatic","termid":"PBO:0044320"}


id: GO:2000031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salicylic acid mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of salicylic acid mediated signaling pathway","synonyms":[{"name":"regulation of salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:2000031"}


id: PBO:0004643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Ykt6 (predicted)","termid":"PBO:0004643"}


id: PBO:0000813
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage site","termid":"PBO:0000813"}


id: PBO:0075378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 15","termid":"PBO:0075378"}


id: PBO:0054739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2148","termid":"PBO:0054739"}


id: PBO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP298-TCP10L readthrough","termid":"PBO:0042885"}


id: PBO:0054232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1614","termid":"PBO:0054232"}


id: PBO:0051091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 2P (pseudogene)","termid":"PBO:0051091"}


id: PBO:0083819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and import into the ER; other members are Sec62p, Sec66p, and Sec72p","termid":"PBO:0083819"}


id: PR:O59711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.03 gene.","definition_xrefs":["UniProtKB:O59711","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase [NADP(+), L-glutamate-forming] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.03","synonyms":[{"name":"Spom972h-SPBC3B8.03","type":"exact"},{"name":"saccharopine reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59711"}


id: PBO:0090254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase (H3-trimethyl-K4 specific), Lid2 complex subunit Lid2","termid":"PBO:0090254"}


id: SO:1001249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by domain similarity.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"supported_by_domain_match","termid":"SO:0000908"},{"relation_name":"is_a","term_name":"CDS_supported_by_sequence_similarity_data","termid":"SO:1001251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_domain_match_data","synonyms":[{"name":"CDS supported by domain match data","type":"exact"}],"termid":"SO:1001249"}


id: GO:0051903
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106322"},{"annotations":[99596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106321"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione + NAD(P)+ = S-formylglutathione + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R07140","KEGG_REACTION:R06983","MetaCyc:RXN-2962","UM-BBD_reactionID:r1146","Reactome:R-HSA-5692237"],"synonyms":[{"name":"ADH3 activity","type":"narrow"},{"name":"FDH activity","type":"related"},{"name":"GD-FALDH activity","type":"related"},{"name":"GS-FDH activity","type":"related"},{"name":"NAD- and glutathione-dependent formaldehyde dehydrogenase activity","type":"related"},{"name":"NAD-dependent formaldehyde dehydrogenase activity","type":"related"},{"name":"NAD-linked formaldehyde dehydrogenase activity","type":"related"},{"name":"S-(hydroxymethyl)glutathione:NAD+ oxidoreductase activity","type":"related"},{"name":"chi-ADH activity","type":"narrow"},{"name":"class III alcohol dehydrogenase activity","type":"related"},{"name":"formic dehydrogenase activity","type":"related"},{"name":"glutathione-dependent formaldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0051903","terms_by_termid":{"GO:0106321":null,"GO:0106322":null}}


id: GO:0071947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein as part of a process of ubiquitin-dependent protein catabolism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"},{"relation_name":"part_of","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0030163","GO:0008150"],"is_obsolete":false,"name":"protein deubiquitination involved in ubiquitin-dependent protein catabolic process","termid":"GO:0071947"}


id: PBO:0072555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding A pseudogene 1","termid":"PBO:0072555"}


id: FYPO:0005354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which site-specific DNA replication termination at the RTS1 barrier in the mating type region is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal site-specific DNA replication termination at RTS1 barrier","synonyms":[{"name":"normal site-specific DNA replication termination at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"normal site-specific DNA replication termination at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005354"}


id: PBO:0005223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit/TATA-binding protein associated factor/transcription factor TFIID complex subunit Taf5","termid":"PBO:0005223"}


id: GO:0034252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of amides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"regulation of amide catabolic process","termid":"GO:0034251"},{"relation_name":"negatively_regulates","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amide catabolic process","synonyms":[{"name":"negative regulation of amide breakdown","type":"exact"},{"name":"negative regulation of amide catabolism","type":"exact"},{"name":"negative regulation of amide degradation","type":"related"},{"name":"negative regulation of cellular amide catabolic process","type":"exact"}],"termid":"GO:0034252"}


id: PBO:0002146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi5 complex subunit Swi2","termid":"PBO:0002146"}


id: PBO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type","termid":"PBO:0000416"}


id: PBO:0069468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 733, pseudogene","termid":"PBO:0069468"}


id: PBO:0065525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched 2","termid":"PBO:0065525"}


id: PBO:0027792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphatase_activity","termid":"PBO:0027792"}


id: GO:0030417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotianamine, 2(S),3'2(S),3''(S)-N-(N-(3-amino-3-carboxypropyl)-3-amino-3-carboxypropyl)-azetidine-2-carboxylic acid.","definition_xrefs":["PMID:10069850","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nicotianamine metabolic process","synonyms":[{"name":"nicotianamine metabolism","type":"exact"}],"termid":"GO:0030417"}


id: SO:0001443
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophilic amino acid encoded by the codons GGN (GGT, GGC, GGA and GGG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine","synonyms":[{"name":"G","type":"exact"},{"name":"Gly","type":"exact"}],"termid":"SO:0001443"}


id: PBO:0002397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-pseudouridine synthase (predicted)","termid":"PBO:0002397"}


id: GO:0102255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: neo-lambda-carrahexaose + H2O = neo-lambda-carratetraose + neo-lambda-carrabiose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete neo-lambda-carrahexaose hydrolase activity (obsolete GO:0102255)","termid":"GO:0102255"}


id: PATO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is less than extreme in type or degree or effect or force.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moderate intensity","termid":"PATO:0000395"}


id: GO:0046314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphocreatine, a phosphagen of creatine which is synthesized and broken down by creatine phosphokinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphocreatine metabolic process","termid":"GO:0006603"},{"relation_name":"is_a","term_name":"phosphagen biosynthetic process","termid":"GO:0042396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphocreatine biosynthetic process","synonyms":[{"name":"phosphocreatine anabolism","type":"exact"},{"name":"phosphocreatine biosynthesis","type":"exact"},{"name":"phosphocreatine formation","type":"exact"},{"name":"phosphocreatine synthesis","type":"exact"}],"termid":"GO:0046314"}


id: PR:Q9HDT9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.18 gene.","definition_xrefs":["UniProtKB:Q9HDT9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0768 protein PB2B2.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.18","synonyms":[{"name":"Spom972h-SPBPB2B2.18","type":"exact"}],"termid":"PR:Q9HDT9"}


id: GO:0102105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: feruloylacetyl-CoA + 4-coumaryl-CoA + H2O = demethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete demethoxycurcumin synthase activity from feruloylacetyl-CoA (obsolete GO:0102105)","termid":"GO:0102105"}


id: PBO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid biosynthesis protein (predicted)","termid":"PBO:0001219"}


id: PBO:0038832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 5","termid":"PBO:0038832"}


id: PBO:0109090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 4","termid":"PBO:0109090"}


id: GO:0150037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium-dependent activation of synaptic vesicle fusion.","definition_xrefs":["GOC:bc","PMID:27052163","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031630"},{"relation_name":"regulates","term_name":"calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0099502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0150037"}


id: PBO:0040952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 23","termid":"PBO:0040952"}


id: GO:0043660
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A symbiosome containing any of various structurally modified bacteria, such as those occurring on the root nodules of leguminous plants.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiosome","termid":"GO:0043659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"bacteroid-containing symbiosome","termid":"GO:0043660"}


id: MOD:00569
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues that are isobaric at a resolution below 0.000001 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"}


id: GO:0035005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 4-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + ADP + H+.","definition_xrefs":["RHEA:18373","EC:2.7.1.154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"1-phosphatidylinositol-4-phosphate 3-kinase activity","secondary_identifiers":["KEGG_REACTION:R05795","Reactome:R-HSA-8868072","Reactome:R-HSA-1676206","MetaCyc:2.7.1.154-RXN","Reactome:R-HSA-1675928","Reactome:R-HSA-1676109"],"synonyms":[{"name":"ATP:1-phosphatidyl-1D-myo-inositol-4-phosphate 3-phosphotransferase activity","type":"related"},{"name":"C2-domain-containing phosphoinositide 3-kinase activity","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class I","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"narrow"},{"name":"phosphatidylinositol 3-kinase, class I, catalyst activity","type":"narrow"},{"name":"phosphatidylinositol-4-phosphate 3-kinase activity","type":"exact"},{"name":"type II phosphoinositide 3-kinase activity","type":"related"}],"termid":"GO:0035005"}


id: PBO:0054808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2221","termid":"PBO:0054808"}


id: PBO:0087736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; the SMC5-SMC6 complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; binds single-stranded DNA and has ATPase activity; supports nucleolar function; S. pombe homolog forms a heterodimer with S. pombe Rad18p that is involved in DNA repair","termid":"PBO:0087736"}


id: PBO:0054929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2343","termid":"PBO:0054929"}


id: PBO:0045204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B14","termid":"PBO:0045204"}


id: PBO:0087363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific enzyme required for spore wall maturation; involved in the production of a soluble LL-dityrosine-containing precursor of the spore wall; transcripts accumulate at the time of prospore enclosure","termid":"PBO:0087363"}


id: GO:0005731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of a chromosome where nucleoli form during interphase, and where genes encoding the largest rRNA precursor transcript are tandemly arrayed.","definition_xrefs":["PMID:14504406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleolar chromatin","termid":"GO:0030874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005730","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleolus organizer region","secondary_identifiers":["Wikipedia:Nucleolus_organizer_region"],"synonyms":[{"name":"NOR","type":"exact"},{"name":"nucleolus organiser region","type":"exact"},{"name":"nucleolus organizer complex","type":"related"}],"termid":"GO:0005731"}


id: PBO:0082115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-coA synthetase isoform; along with Acs1p, acetyl-coA synthetase isoform is the nuclear source of acetyl-coA for histone acetylation; mutants affect global transcription; required for growth on glucose; expressed under anaerobic conditions","termid":"PBO:0082115"}


id: SO:0001757
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL12 RNA leader sequence to the 5' end of an mRNA. SL12 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL12_acceptor_site","synonyms":[{"name":"SL12 acceptor site","type":"exact"}],"termid":"SO:0001757"}


id: PBO:0051517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 beta","termid":"PBO:0051517"}


id: PBO:0070127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 41 pseudogene","termid":"PBO:0070127"}


id: PBO:0014242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein Mzt1","termid":"PBO:0014242"}


id: PBO:0070376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 2 pseudogene 1","termid":"PBO:0070376"}


id: FYPO:0003963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}


id: GO:2001042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of septum digestion after cytokinesis","termid":"GO:0010590"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of septum digestion after cytokinesis","synonyms":[{"name":"negative regulation of cytokinetic cell separation","type":"exact"}],"termid":"GO:2001042"}


id: PBO:0053827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1091","termid":"PBO:0053827"}


id: GO:0009489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A low molecular weight mononuclear iron protein involved in electron transfer, with an iron tetrahedrally coordinated by the sulfurs of four conserved cysteine residues.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete rubredoxin (obsolete GO:0009489)","synonyms":[{"name":"rubredoxin","type":"exact"}],"termid":"GO:0009489"}


id: FYPO:0001722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sodium export","termid":"FYPO:0001721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased sodium export","synonyms":[{"name":"decreased cellular sodium export","type":"exact"},{"name":"decreased sodium export during mitotic cell cycle","type":"related"},{"name":"decreased sodium export during vegetative growth","type":"exact"},{"name":"decreased sodium export from cell","type":"exact"},{"name":"decreased sodium ion export","type":"exact"},{"name":"reduced sodium export","type":"exact"}],"termid":"FYPO:0001722"}


id: GO:0097177
data:
  {"annotated_genes":["SJAG_04635","SJAG_04351","SJAG_02856"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88012,98736,101716],"is_not":false,"summary":null,"term":"GO:0097177"}]},"cv_name":"molecular_function","definition":"Binding to a mitochondrial ribosome.","definition_xrefs":["GOC:ans","PMID:20739282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome binding","termid":"GO:0043022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02856":null,"SJAG_04351":null,"SJAG_04635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mitochondrial ribosome binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097177","terms_by_termid":{"GO:0097177":null}}


id: PBO:0070058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 15, pseudogene","termid":"PBO:0070058"}


id: PBO:0067699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 7","termid":"PBO:0067699"}


id: FYPO:0000890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000883"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000885"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth","termid":"FYPO:0003096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 trimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H3-K9 trimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased histone H3K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000890"}


id: PBO:0077260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 10","termid":"PBO:0077260"}


id: GO:2001224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of neuron migration","termid":"GO:2001222"},{"relation_name":"positively_regulates","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron migration","synonyms":[{"name":"positive regulation of neuron chemotaxis","type":"exact"},{"name":"positive regulation of neuron guidance","type":"related"},{"name":"positive regulation of neuronal migration","type":"exact"}],"termid":"GO:2001224"}


id: GO:0034765
data:
  {"annotated_genes":["SJAG_03631","SJAG_04551","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109525,87241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[98246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ion membrane transport","type":"exact"},{"name":"regulation of ion transmembrane transport","type":"broad"},{"name":"regulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034765","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:0033489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, via the intermediate desmosterol.","definition_xrefs":["MetaCyc:PWY66-4","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol biosynthetic process","termid":"GO:0006695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cholesterol biosynthetic process via desmosterol","synonyms":[{"name":"cholesterol anabolism via desmosterol","type":"exact"},{"name":"cholesterol biosynthesis via desmosterol","type":"exact"},{"name":"cholesterol formation via desmosterol","type":"exact"},{"name":"cholesterol synthesis via desmosterol","type":"exact"}],"termid":"GO:0033489"}


id: GO:0004375
data:
  {"annotated_genes":["SJAG_03861","SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84707,109197],"is_not":false,"summary":null,"term":"GO:0004375"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2.","definition_xrefs":["EC:1.4.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor","termid":"GO:0016642"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycine dehydrogenase (decarboxylating) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GCVP-RXN","Reactome:R-HSA-5693967","RHEA:24304"],"synonyms":[{"name":"P-protein","type":"narrow"},{"name":"glycine cleavage system P-protein activity","type":"narrow"},{"name":"glycine decarboxylase activity","type":"related"},{"name":"glycine-cleavage complex","type":"related"},{"name":"glycine-cleavage complex P-protein activity","type":"related"},{"name":"glycine:H-protein-lipoyllysine oxidoreductase (decarboxylating, acceptor-amino-methylating)","type":"related"},{"name":"glycine:lipoylprotein oxidoreductase (decarboxylating and acceptor-aminomethylating)","type":"related"},{"name":"protein P1","type":"narrow"}],"termid":"GO:0004375","terms_by_termid":{"GO:0004375":null}}


id: PBO:0068720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 9, pseudogene","termid":"PBO:0068720"}


id: PBO:0042509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 3","termid":"PBO:0042509"}


id: PBO:0053206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 4","termid":"PBO:0053206"}


id: GO:2001117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a tetrahydromethanopterin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanopterin-containing compound metabolic process","termid":"GO:2001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrahydromethanopterin metabolic process","synonyms":[{"name":"tetrahydromethanopterin metabolism","type":"exact"}],"termid":"GO:2001117"}


id: PBO:0076300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin repeat containing nuclear envelope family member 4","termid":"PBO:0076300"}


id: GO:0018327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-histidine to form 1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine).","definition_xrefs":["RESID:AA0035"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 1'-phospho-L-histidine (obsolete GO:0018327)","termid":"GO:0018327"}


id: PBO:0113077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase; has ten cyclin partners; involved in regulating the cellular response to nutrient levels, environmental conditions and progression through the cell cycle; involved in the hyperphosphorylation of Srl3p (Whi7p), regulating protein stability, mRNA levels and promotion of START; human lissencephaly-associated homolog CDK5 functionally complements null mutation","termid":"PBO:0113077"}


id: PBO:0088549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human HID1 ortholog 1, possible Golgi protein (by similarity)","termid":"PBO:0088549"}


id: GO:0045888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription of homeotic genes of the Polycomb group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription of homeotic gene (Polycomb group) (obsolete GO:0045888)","synonyms":[{"name":"regulation of transcription of homeotic gene (Polycomb group)","type":"exact"}],"termid":"GO:0045888"}


id: GO:0018301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into an iron-sulfur cluster by tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon.","definition_xrefs":["RESID:AA0268"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon (obsolete GO:0018301)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-cysteine persulphido-bis-L-glutamato-L-histidino tetrairon","type":"exact"}],"termid":"GO:0018301"}


id: GO:0060160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of dopamine receptor protein signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of dopamine receptor signaling pathway","termid":"GO:0060159"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dopamine receptor signaling pathway","synonyms":[{"name":"negative regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060160"}


id: GO:0040034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which an integrated living unit or organism progresses from an initial condition to a later condition and the rate at which this time point is reached.","definition_xrefs":["PMID:9442909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of development, heterochronic","synonyms":[{"name":"developmental timing","type":"related"},{"name":"heterochronic regulation of development","type":"exact"},{"name":"temporal regulation of development","type":"exact"}],"termid":"GO:0040034"}


id: GO:0044500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant decrease of the force with which blood travels through the circulatory system of the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:19837656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood pressure in another organism","termid":"GO:0044498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of blood pressure in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of blood pressure in other organism","type":"exact"},{"name":"hypotensive activity in other organism","type":"exact"}],"termid":"GO:0044500"}


id: GO:1903501
data:
  {"annotated_genes":["SJAG_04597","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86031,90456],"is_not":false,"summary":null,"term":"GO:1903501"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:mtg_cell_cycle","GO_REF:0000058","GOC:TermGenie","GOC:vw","PMID:18256290","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"regulation of mitotic actomyosin contractile ring assembly","termid":"GO:1903499"},{"relation_name":"is_a","term_name":"positive regulation of cytokinesis, actomyosin contractile ring assembly","termid":"GO:2000433"},{"relation_name":"positively_regulates","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000281","GO:0030036","GO:0044085","GO:0007010","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"narrow"},{"name":"activation of contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"activation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"activation of mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"positive regulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"positive regulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"positive regulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"positive regulation of mitotic cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"up regulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"up regulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up regulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up regulation of mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up-regulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"up-regulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up-regulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up-regulation of mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"upregulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"upregulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"upregulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"upregulation of mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903501","terms_by_termid":{"GO:1903501":null}}


id: PBO:0081658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF582 divergent transcript","termid":"PBO:0081658"}


id: GO:1901185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"negatively_regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERBB signaling pathway","synonyms":[{"name":"down regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"down regulation of EGFR family signaling pathway","type":"related"},{"name":"down regulation of ERBB signaling pathway","type":"exact"},{"name":"down regulation of ERBB signalling pathway","type":"exact"},{"name":"down regulation of ErbB signaling","type":"exact"},{"name":"down-regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"down-regulation of EGFR family signaling pathway","type":"related"},{"name":"down-regulation of ERBB signaling pathway","type":"exact"},{"name":"down-regulation of ERBB signalling pathway","type":"exact"},{"name":"down-regulation of ErbB signaling","type":"exact"},{"name":"downregulation of EGF receptor family signaling pathway","type":"exact"},{"name":"downregulation of EGFR family signaling pathway","type":"related"},{"name":"downregulation of ERBB signaling pathway","type":"exact"},{"name":"downregulation of ERBB signalling pathway","type":"exact"},{"name":"downregulation of ErbB signaling","type":"exact"},{"name":"inhibition of EGF receptor family signaling pathway","type":"exact"},{"name":"inhibition of EGFR family signaling pathway","type":"related"},{"name":"inhibition of ERBB signaling pathway","type":"narrow"},{"name":"inhibition of ERBB signalling pathway","type":"exact"},{"name":"inhibition of ErbB signaling","type":"exact"},{"name":"negative regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"negative regulation of EGFR family signaling pathway","type":"related"},{"name":"negative regulation of ERBB signalling pathway","type":"exact"},{"name":"negative regulation of ErbB signaling","type":"exact"}],"termid":"GO:1901185"}


id: FYPO:0001964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aculeacin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to aculeacin A","synonyms":[{"name":"resistance to aculeacin A during mitotic cell cycle","type":"related"},{"name":"resistance to aculeacin A during vegetative growth","type":"exact"},{"name":"resistant to aculeacin A","type":"exact"}],"termid":"FYPO:0001964"}


id: GO:0010156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Formation and development of sporocyte, the haploid spores of angiosperms which are initiated by the differentiation of a subset of floral cells into sporocytes, which then undergo meiotic divisions to form microspores and megaspores.","definition_xrefs":["PMID:10465788"],"gene_count":0,"genotype_count":0,"name":"obsolete sporocyte morphogenesis (obsolete GO:0010156)","synonyms":[{"name":"sporocyte morphogenesis","type":"exact"}],"termid":"GO:0010156"}


id: PBO:0070107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 21 pseudogene","termid":"PBO:0070107"}


id: PBO:0042465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4 pseudogene 2","termid":"PBO:0042465"}


id: PBO:0066788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 87","termid":"PBO:0066788"}


id: PBO:0056238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI family member, X-linked","termid":"PBO:0056238"}


id: PBO:0048932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLPH3 divergent transcript","termid":"PBO:0048932"}


id: GO:0098730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The symmetric division of a male germline stem cell to produce two male germline stem cells. An example of this is found in mammalian spermatogonial stem cells, some proportion of which divide symmetrically, so amplifying the population. The choice between asymmetric and symmetric division in this case appears to be internal and stochastic.","definition_xrefs":["GOC:dos","PMID:19948499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell symmetric division","termid":"GO:0098729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germline stem cell symmetric division","termid":"GO:0098730"}


id: GO:1901692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of compound eye retinal cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie","PMID:12021768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye retinal cell apoptotic process","termid":"GO:1901692"}


id: PBO:0091778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A catalytic subunit Ppa2","termid":"PBO:0091778"}


id: GO:2000885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a galactoglucomannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"galactoglucomannan metabolic process","termid":"GO:0010392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galactoglucomannan catabolic process","synonyms":[{"name":"galactoglucomannan catabolism","type":"exact"}],"termid":"GO:2000885"}


id: PBO:0069383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 643, pseudogene","termid":"PBO:0069383"}


id: GO:0044818
data:
  {"annotated_genes":["SJAG_01010","SJAG_02074","SJAG_04671","SJAG_04287","SJAG_02098","SJAG_00364","SJAG_02771","SJAG_03927","SJAG_03942","SJAG_05373","SJAG_01146","SJAG_01429","SJAG_01873","SJAG_02563","SJAG_01680","SJAG_01605","SJAG_02576","SJAG_03695","SJAG_01076","SJAG_02266","SJAG_01044","SJAG_01205","SJAG_03026","SJAG_00640","SJAG_03160"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108191,112990,89985,96626,95444,102737,113290,112240,95276,99433,90008,85152,88552,87454,105456,113459,103973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[105457,85153,113205,107886,89987,95445,86242,87455,113901,97142,96627,84581,110428,102738,87816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"A cell cycle checkpoint that detects and negatively regulates progression from G2 to M phase as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04287":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0007049","GO:0044772","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mitotic G2/M transition checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044818","terms_by_termid":{"GO:0007095":null,"GO:0033314":null}}


id: PBO:0065754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen phosphorylase L","termid":"PBO:0065754"}


id: PBO:0078651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 4-1","termid":"PBO:0078651"}


id: GO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desmosome organization","termid":"GO:0002934"},{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"desmosome assembly","termid":"GO:0002159"}


id: PBO:0110199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitocondrial and nuclear tRNA (guanine-N2-)-methyltransferase Trm1.2","termid":"PBO:0110199"}


id: GO:0039724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway by reducing the activity of host I-kappa-B kinase epsilon (IKBKE/IKK-epsilon/IKK-E).","definition_xrefs":["PMID:22532683","PMID:24173023","PMID:19153231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IKBKE activity","secondary_identifiers":["VZ:4478"],"synonyms":[{"name":"inhibition of host IKBKE by virus","type":"related"},{"name":"suppression by virus of host IKBKE activity","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IKBKE activity","type":"narrow"}],"termid":"GO:0039724"}


id: PBO:0071890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 28","termid":"PBO:0071890"}


id: PR:Q9P3E8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC750.02c/SPBPB2B2.16c.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3E8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C750.02c/PB2B2.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.16c","synonyms":[{"name":"Spom972h-SPBPB2B2.16c","type":"exact"}],"termid":"PR:Q9P3E8"}


id: PBO:0044149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTCF divergent transcript","termid":"PBO:0044149"}


id: GO:2000181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel morphogenesis.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"negative regulation of vasculature development","termid":"GO:1901343"},{"relation_name":"negatively_regulates","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel morphogenesis","termid":"GO:2000181"}


id: PBO:0017680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-xylose 1-dehydrogenase (NADP+) (predicted)","termid":"PBO:0017680"}


id: PBO:0081641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF567 divergent transcript","termid":"PBO:0081641"}


id: PBO:0090799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/ASTRA complex, phosphatidylinositol pseudokinase Tra1","termid":"PBO:0090799"}


id: GO:0015188
data:
  {"annotated_genes":["SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98913,106169],"is_not":false,"summary":null,"term":"GO:0015188"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-isoleucine from one side of a membrane to the other. L-isoleucine is (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-isoleucine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine transporter activity","type":"broad"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"}],"termid":"GO:0015188","terms_by_termid":{"GO:0015188":null}}


id: PBO:0042804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral endothelial cell adhesion molecule","termid":"PBO:0042804"}


id: PBO:0047078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member G, pseudogene","termid":"PBO:0047078"}


id: GO:0006867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of asparagine, alpha-aminosuccinamic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"asparagine transport","synonyms":[{"name":"L-asparagine transport","type":"narrow"}],"termid":"GO:0006867"}


id: GO:0002251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response taking place in an organ or tissues such as the liver, brain, mucosa, or nervous system tissues.","definition_xrefs":["GOC:jal","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ or tissue specific immune response","synonyms":[{"name":"immune response in organ or tissue","type":"exact"}],"termid":"GO:0002251"}


id: PBO:0074371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMCR8-C9orf72 complex subunit","termid":"PBO:0074371"}


id: PBO:0065877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB28, member RAS oncogene family pseudogene 5","termid":"PBO:0065877"}


id: GO:0010827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"D-glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of D-glucose transmembrane transport","synonyms":[{"name":"regulation of glucose transmembrane transport","type":"exact"},{"name":"regulation of glucose transport","type":"related"}],"termid":"GO:0010827"}


id: PBO:0034745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bcap family homolog, implicated in vesicle-mediated transport (predicted)","termid":"PBO:0034745"}


id: PBO:0059264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L30 pseudogene 1","termid":"PBO:0059264"}


id: PR:P0CT64
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1601 gene.","definition_xrefs":["UniProtKB:P0CT64","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S16-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.14","synonyms":[{"name":"Spom972h-rps1601","type":"exact"}],"termid":"PR:P0CT64"}


id: GO:0160209
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that contains the fragile X mental retardation protein (FMRP) and cytoplasmic FMRP Interacting protein 1 (CYIFIP1), and is capable of inhibiting translation initiation by binding to the eIF4F complex.","definition_xrefs":["PMID:18805096","PMID:28183735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"FMRP-CYFIP1 complex","termid":"GO:0160209"}


id: PBO:0081570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF496 divergent transcript","termid":"PBO:0081570"}


id: GO:0061045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"is_a","term_name":"negative regulation of response to wounding","termid":"GO:1903035"},{"relation_name":"negatively_regulates","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of wound healing","termid":"GO:0061045"}


id: PBO:0002886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Ctf8 (predicted)","termid":"PBO:0002886"}


id: GO:0009247
data:
  {"annotated_genes":["SJAG_06425","SJAG_03066","SJAG_04881","SJAG_00068","SJAG_05311","SJAG_02488","SJAG_04975","SJAG_03292","SJAG_03672","SJAG_00846","SJAG_04913","SJAG_04924","SJAG_03953","SJAG_00831","SJAG_03878","SJAG_02523","SJAG_04119","SJAG_02913","SJAG_03115","SJAG_04337","SJAG_05278","SJAG_01416","SJAG_03506","SJAG_02776","SJAG_06383","SJAG_03801","SJAG_02903","SJAG_05327","SJAG_01860","SJAG_04165","SJAG_04878","SJAG_05219","SJAG_02168","SJAG_00295","SJAG_01227","SJAG_02804","SJAG_01570"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85583,89113,96315,106070,107756,110110,84959,89570,92489,99155,87421,88250,89024,113421,83476,99832,102843,94180,96381,90559,97695,99895,104722,111384,112314,94744,94952,87248,108516,84687,103684,110954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[86768,108695,91303,91790,87829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"membrane lipid biosynthetic process","termid":"GO:0046467"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02168":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycolipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-401"],"synonyms":[{"name":"glycolipid anabolism","type":"exact"},{"name":"glycolipid biosynthesis","type":"exact"},{"name":"glycolipid formation","type":"exact"},{"name":"glycolipid synthesis","type":"exact"}],"termid":"GO:0009247","terms_by_termid":{"GO:0006506":null,"GO:0051999":null}}


id: PR:O42871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- png1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein png1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.08","synonyms":[{"name":"ING1 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-png1","type":"exact"}],"termid":"PR:O42871"}


id: FYPO:0002559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to actomyosin contractile ring","synonyms":[{"name":"normal protein localisation to actomyosin contractile ring","type":"exact"},{"name":"normal protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"normal protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"normal protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"normal protein localization to contractile ring","type":"exact"},{"name":"normal protein localization to cytokinetic contractile ring","type":"exact"},{"name":"normal protein localization to mitotic contractile ring","type":"exact"},{"name":"normal protein recruitment to actomyosin contractile ring","type":"related"}],"termid":"FYPO:0002559"}


id: GO:2001005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of pectin catabolic process","termid":"GO:2001003"},{"relation_name":"positively_regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pectin catabolic process","synonyms":[{"name":"positive regulation of pectin breakdown","type":"exact"},{"name":"positive regulation of pectin catabolism","type":"exact"},{"name":"positive regulation of pectin degradation","type":"exact"}],"termid":"GO:2001005"}


id: PBO:0027374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_transferase_activity","termid":"PBO:0027374"}


id: PBO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 2","termid":"PBO:0046139"}


id: PBO:0082935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; functions with J-protein partner Zuo1p; may be involved in the folding of newly-synthesized polypeptide chains; member of the HSP70 family; SSB2 has a paralog, SSB1, that arose from the whole genome duplication","termid":"PBO:0082935"}


id: GO:0016888
data:
  {"annotated_genes":["SJAG_01648","SJAG_04183","SJAG_01832","SJAG_03994","SJAG_01173","SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103897,93200,97265,99310,84431,100283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"},{"relation_name":"is_a","term_name":"endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","termid":"GO:0016893"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016788","GO:0140097","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-912368","EC:3.1.21.-"],"synonyms":[{"name":"endodeoxyribonuclease activity, producing 5' phosphomonoesters","type":"exact"}],"termid":"GO:0016888","terms_by_termid":{"GO:0017108":null}}


id: GO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Wnt signal transduction.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"positively_regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Wnt signaling pathway","secondary_identifiers":["GO:0045811"],"synonyms":[{"name":"activation of Wnt receptor signaling pathway","type":"narrow"},{"name":"activation of frizzled signaling pathway","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"positive regulation of frizzled signaling pathway","type":"exact"},{"name":"positive regulation of frizzled signalling pathway","type":"exact"},{"name":"stimulation of Wnt receptor signaling pathway","type":"narrow"},{"name":"stimulation of frizzled signaling pathway","type":"narrow"},{"name":"up regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"up regulation of frizzled signaling pathway","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"up-regulation of frizzled signaling pathway","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway","type":"exact"},{"name":"upregulation of frizzled signaling pathway","type":"exact"}],"termid":"GO:0030177"}


id: FYPO:0000920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of aconitate hydratase (also known as aconitase) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal aconitate hydratase activity","synonyms":[{"name":"abnormal aconitase activity","type":"exact"}],"termid":"FYPO:0000920"}


id: PBO:0046265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMC3 antisense RNA 1","termid":"PBO:0046265"}


id: PR:O74360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.03","synonyms":[{"name":"Spom972h-rga4","type":"exact"}],"termid":"PR:O74360"}


id: GO:0030703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the eggshell, a product of the somatic follicle cell epithelium and a structure that supports the egg in a hostile environment, minimizing water loss whilst allowing gas exchanges essential for embryonic respiration.","definition_xrefs":["PMID:10822261","ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eggshell formation","termid":"GO:0030703"}


id: PBO:0050172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 28","termid":"PBO:0050172"}


id: PBO:0042046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 102B","termid":"PBO:0042046"}


id: _global:has_characteristic
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Inverse of characteristic_of","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_characteristic","secondary_identifiers":["RO:0000053"],"termid":"_global:has_characteristic"}


id: PBO:0072851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 1","termid":"PBO:0072851"}


id: GO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopolysaccharide.","definition_xrefs":["PMID:11079463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"lipopolysaccharide binding","synonyms":[{"name":"LPS binding","type":"exact"},{"name":"endotoxin binding","type":"broad"}],"termid":"GO:0001530"}


id: GO:0061108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the seminal vesicle epithelium over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"seminal vesicle development","termid":"GO:0061107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seminal vesicle epithelium development","termid":"GO:0061108"}


id: PBO:0060404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 15, NatA auxiliary subunit","termid":"PBO:0060404"}


id: SO:0000553
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The site on an RNA transcript to which will be added adenine residues by post-transcriptional polyadenylation. The boundary between the UTR and the polyA sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"},{"relation_name":"part_of","term_name":"mature_transcript","termid":"SO:0000233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyA_site","secondary_identifiers":["SO:0001430"],"synonyms":[{"name":"INSDC_feature:polyA_site","type":"exact"},{"name":"polyA cleavage site","type":"exact"},{"name":"polyA junction","type":"exact"},{"name":"polyA site","type":"exact"},{"name":"polyA_junction","type":"exact"},{"name":"polyadenylation site","type":"related"}],"termid":"SO:0000553"}


id: PBO:0088893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ubiquitin-protein ligase E3 involved in peroxisome organization and biogenesis","termid":"PBO:0088893"}


id: GO:0030917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary development","synonyms":[{"name":"MHB development","type":"exact"},{"name":"isthmic organizer development","type":"exact"},{"name":"isthmomesencephalic boundary development","type":"exact"},{"name":"isthmus development","type":"exact"},{"name":"midbrain-hindbrain orgainizer development","type":"exact"}],"termid":"GO:0030917"}


id: PBO:0017001
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eighteen Interacting Centromere protein","termid":"PBO:0017001"}


id: SO:0000646
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small RNA molecule that is the product of a longer exogenous or endogenous dsRNA, which is either a bimolecular duplex or very long hairpin, processed (via the Dicer pathway) such that numerous siRNAs accumulate from both strands of the dsRNA. siRNAs trigger the cleavage of their target molecules.","definition_xrefs":["PMID:12592000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/SiRNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:siRNA","type":"exact"},{"name":"small interfering RNA","type":"exact"}],"termid":"SO:0000646"}


id: PR:Q9UTR6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- och1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiation-specific alpha-1,6-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.05c","synonyms":[{"name":"Spom972h-och1","type":"exact"}],"termid":"PR:Q9UTR6"}


id: GO:0019215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an intermediate filament, a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"intermediate filament binding","termid":"GO:0019215"}


id: PBO:0086042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in multidrug resistance; green fluorescent protein (GFP)-fusion localizes to the ER; null mutant displays increased levels of spontaneous Rad52p foci; IRC23 has a paralog, BSC2, that arose from the whole genome duplication","termid":"PBO:0086042"}


id: PBO:0086784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0086784"}


id: GO:1900582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving o-orsellinic acid.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"o-orsellinic acid metabolic process","synonyms":[{"name":"o-orsellinic acid metabolism","type":"exact"}],"termid":"GO:1900582"}


id: PBO:0057655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1247","termid":"PBO:0057655"}


id: MOD:01806
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to N,N-dimethyl-L-leucine.","definition_xrefs":["RESID:AA0538","PubMed:19522542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino dimethylated residue","termid":"MOD:01686"},{"relation_name":"is_a","term_name":"N-methylated leucine","termid":"MOD:01808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-leucine","synonyms":[{"name":"(2S)-2-(dimethylamino)-4-methylpentanoic acid","type":"exact"},{"name":"2-(dimethylamino)-4-methylvaleric acid","type":"exact"},{"name":"2-(dimethylazanyl)-4-methylpentanoic acid","type":"exact"},{"name":"MOD_RES N,N-dimethylleucine","type":"exact"},{"name":"N,N-dimethyl-L-leucine","type":"exact"},{"name":"N,N-dimethylleucine","type":"exact"}],"termid":"MOD:01806"}


id: FYECO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using camptothecin (CPT) and subsequently released from the block.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPT block and release","termid":"FYECO:0000386"}


id: FYPO:0006369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in one or more heterochromatin domains occurs to a greater extent than normal.","definition_xrefs":["PMID:29214404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at heterochromatin domain during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at heterochromatin domain during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at heterochromatin domain during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at heterochromatin domain during vegetative growth","type":"exact"}],"termid":"FYPO:0006369"}


id: PBO:0041772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 11","termid":"PBO:0041772"}


id: PBO:0067998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 300","termid":"PBO:0067998"}


id: GO:0102169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyl-phenazine-1-carboxylate + 2 H+ + NADH + O2 = CO2 + H2O + NAD+ + pyocyanin. Also converts phenazine-1-carboxylate into 1-hydroxyphenazine.","definition_xrefs":["PMID:11591691","EC:1.14.13.218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"5-methylphenazine-1-carboxylate 1-monooxygenase (NADH) activity","synonyms":[{"name":"pyocyanin hydroxylase activity","type":"related"}],"termid":"GO:0102169"}


id: PBO:0072520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 49","termid":"PBO:0072520"}


id: PBO:0029549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_nitrogen_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0029549"}


id: PBO:0047152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 183 member B, pseudogene","termid":"PBO:0047152"}


id: PBO:0090455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin protection protein, shugoshin, Sgo1","termid":"PBO:0090455"}


id: PBO:0058358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4731","termid":"PBO:0058358"}


id: PBO:0001011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXA domain protein Pxa1","termid":"PBO:0001011"}


id: PBO:0062332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 71 pseudogene","termid":"PBO:0062332"}


id: FYPO:0000011
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K 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cellular process phenotype in which a cell does not proceed normally through a cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"cell cycle 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type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G 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cycle","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32915139":null,"PMID:33791858":null},"secondary_identifiers":["FYPO:0000406"],"single_locus_annotated_genes":["SJAG_01143","SJAG_04284","SJAG_03351","SJAG_03596","SJAG_03449","SJAG_02592","SJAG_03575","SJAG_04464","SJAG_02392","SJAG_01330","SJAG_01956","SJAG_04332","SJAG_04522","SJAG_00118"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","sty1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","nup61delta","mad2delta","mid1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","mid2delta","rga4delta"],"synonyms":[{"name":"abnormal cell-division cycle","type":"exact"},{"name":"cell cycle defects","type":"exact"},{"name":"cell cycle progression: abnormal","type":"related"}],"termid":"FYPO:0000011","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003738":null,"FYPO:0004318":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:1900532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of cell proliferation during cellular hyperosmotic response.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell proliferation involved in cellular hyperosmotic response (obsolete GO:1900532)","synonyms":[{"name":"down regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"down regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"down regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"down regulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"down-regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"downregulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"downregulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"downregulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"downregulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"inhibition of cell proliferation of cellular HOG response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular hyperosmotic response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular hypertonic response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular response to hypertonicity","type":"narrow"},{"name":"negative regulation of cell proliferation involved in cellular hyperosmotic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular response to hypertonicity","type":"exact"}],"termid":"GO:1900532"}


id: PBO:0074231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 47 member 1","termid":"PBO:0074231"}


id: GO:0097650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An incomplete microtubule containing 10 protofilaments that fuses with a complete microtubule called A tubule (containing 13 protofilaments) to form an axonemal outer doublet.","definition_xrefs":["GOC:cilia","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0015630","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"B axonemal microtubule","synonyms":[{"name":"B tubule","type":"broad"}],"termid":"GO:0097650"}


id: GO:0004083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-bisphospho-D-glycerate + H2O = 3-phospho-D-glycerate + phosphate.","definition_xrefs":["PMID:8567632","PMID:9452443"],"gene_count":0,"genotype_count":0,"name":"obsolete bisphosphoglycerate 2-phosphatase activity (obsolete GO:0004083)","termid":"GO:0004083"}


id: PBO:0077254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 5","termid":"PBO:0077254"}


id: GO:0008089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal transport","termid":"GO:0098930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"anterograde axonal transport","synonyms":[{"name":"anterograde axon cargo transport","type":"exact"}],"termid":"GO:0008089"}


id: GO:0071632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Eye, head or whole body movements that help to compensate movements of the environment in order to stabilize its image on the retina. In the case of whole body movements, these motor actions may also stabilize a locomotor course in response to some disturbance. Examples include: the optokinetic reflex, which allows human eyes to follow objects in motion while the head remains stationary reflex; the optomotor responses of flying insects and swimming fish.","definition_xrefs":["GOC:dos","PMID:12726833","PMID:2469195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optokinetic behavior","termid":"GO:0007634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optomotor response","secondary_identifiers":["Wikipedia:Optomotor_response"],"termid":"GO:0071632"}


id: GO:0005751
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2).","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex IV (obsolete GO:0005751)","termid":"GO:0005751"}


id: GO:0106314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ammonium hydroxide + 3 NADP+ + H2O = nitrite + 3 NADPH + 3 H+.","definition_xrefs":["RHEA:24632"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrite reductase NADPH activity (obsolete GO:0106314)","termid":"GO:0106314"}


id: FYPO:0002775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of sumoylated protein measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of sumoylated protein in cell","synonyms":[{"name":"decreased accumulation of sumoylated protein in cell","type":"related"},{"name":"decreased level of sumoylated protein in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of sumoylated protein in cell during vegetative growth","type":"exact"},{"name":"decreased sumoylated protein level during vegetative growth","type":"exact"},{"name":"reduced level of sumoylated protein in cell","type":"exact"}],"termid":"FYPO:0002775"}


id: PBO:0071587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 4","termid":"PBO:0071587"}


id: PBO:0041705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2","termid":"PBO:0041705"}


id: GO:0052644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorophyllide a, a chlorophyll lacking the terpenoid side chain, which is the functional parent of chlorophyll a.","definition_xrefs":["PMID:7724548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"chlorophyllide metabolic process","termid":"GO:0052643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"chlorophyllide a metabolic process","synonyms":[{"name":"chlorophyllide a metabolism","type":"exact"}],"termid":"GO:0052644"}


id: PBO:0004906
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart disease","termid":"PBO:0004906"}


id: PBO:0027977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_trimethylation","termid":"PBO:0027977"}


id: GO:2001178
data:
  {"annotated_genes":["SJAG_00973","SJAG_03421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84252,101815],"is_not":false,"summary":null,"term":"GO:2001178"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mediator complex assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of mediator complex assembly","termid":"GO:2001176"},{"relation_name":"positively_regulates","term_name":"mediator complex assembly","termid":"GO:0036034"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00973":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of mediator complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2001178","terms_by_termid":{"GO:2001178":null}}


id: PBO:0086413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GPI-anchored protein; transcription is induced under low-zinc conditions, as mediated by the Zap1p transcription factor, and at alkaline pH","termid":"PBO:0086413"}


id: PBO:0060154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 2 (pseudogene)","termid":"PBO:0060154"}


id: PBO:0005637
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.8","termid":"PBO:0005637"}


id: PBO:0071326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 2","termid":"PBO:0071326"}


id: GO:0031666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of lipopolysaccharide-mediated signaling pathway","termid":"GO:0031664"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"positively_regulates","term_name":"lipopolysaccharide-mediated signaling pathway","termid":"GO:0031663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"activation of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of LPS-mediated signaling pathway","type":"exact"},{"name":"positive regulation of lipopolysaccharide-mediated signalling pathway","type":"exact"},{"name":"stimulation of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"up regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"up-regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"upregulation of lipopolysaccharide-mediated signaling pathway","type":"exact"}],"termid":"GO:0031666"}


id: PBO:0028326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028326"}


id: GO:0052226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in a second organism resulting in the formation of substances, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete biosynthesis of substance in other organism involved in symbiotic interaction (obsolete GO:0052226)","synonyms":[{"name":"biosynthesis of substance in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052226"}


id: PBO:0076760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDH antisense RNA 1","termid":"PBO:0076760"}


id: GO:0098757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-21 stimulus.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-21","termid":"GO:0098756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-21","synonyms":[{"name":"cellular response to IL-21","type":"exact"}],"termid":"GO:0098757"}


id: GO:0000348
data:
  {"annotated_genes":["SJAG_03995"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99318],"is_not":false,"summary":null,"term":"GO:0000348"}]},"cv_name":"biological_process","definition":"Recognition of the pre-mRNA branch site sequence by components of the assembling spliceosome.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0010467","GO:0016071","GO:0044085"],"is_obsolete":false,"name":"mRNA branch site recognition","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000370","GO:0000371"],"synonyms":[{"name":"U12-type nuclear mRNA branch site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA branch site recognition","type":"narrow"},{"name":"nuclear mRNA branch site recognition","type":"exact"},{"name":"spliceosomal A complex biosynthesis","type":"narrow"},{"name":"spliceosomal A complex formation","type":"narrow"},{"name":"spliceosomal B complex biosynthesis","type":"narrow"},{"name":"spliceosomal B complex formation","type":"narrow"}],"termid":"GO:0000348","terms_by_termid":{"GO:0000348":null}}


id: FYPO:0002495
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115411,115412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein modification is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein metabolic process","termid":"FYPO:0004849"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03118","SJAG_03689"],"name":"normal protein modification","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal protein/peptide modification","type":"exact"},{"name":"protein/peptide modification: normal","type":"related"}],"termid":"FYPO:0002495","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: RO:0009003
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"\\\"immersed in\\\" is a relation between a (physical) entity and a fluid substance in which the entity is wholely or substantially surrounded by the substance.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immersed_in","termid":"RO:0009003"}


id: PBO:0062881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTX2 pseudogene 2","termid":"PBO:0062881"}


id: GO:0008990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N2-methylguanine.","definition_xrefs":["PMID:17389639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140098","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"rRNA (guanine-N2-)-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07234"],"synonyms":[{"name":"S-adenosyl-L-methionine:rRNA (guanine-2-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:rRNA (guanine-N2-)-methyltransferase activity","type":"related"},{"name":"ribosomal ribonucleate guanine-2-methyltransferase activity","type":"related"}],"termid":"GO:0008990"}


id: PBO:0074522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A14","termid":"PBO:0074522"}


id: PBO:0034424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protease_activator_(obsolete_protease_activator)","termid":"PBO:0034424"}


id: GO:0034536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-8-methylchromene-2-carboxylate = 2-hydroxy-3-methylbenzalpyruvate.","definition_xrefs":["UM-BBD_reactionID:r0782"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-8-methylchromene-2-carboxylate isomerase activity (obsolete GO:0034536)","termid":"GO:0034536"}


id: PBO:0012270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 7 (predicted)","termid":"PBO:0012270"}


id: GO:0031831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5B serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 5B serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 5B receptor binding","type":"exact"},{"name":"type 5B serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031831"}


id: FYPO:0000629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which programmed cell death by apoptosis is abnormal. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["PomBase:mah","GO:0006915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal apoptotic process","synonyms":[{"name":"abnormal apoptosis","type":"narrow"}],"termid":"FYPO:0000629"}


id: PBO:0077258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein family member 8","termid":"PBO:0077258"}


id: FYPO:0004482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole fusion, the merging of two vacuole membranes to form a single vacuole, is abnormal.","definition_xrefs":["GO:0042144","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole organization during vegetative growth","termid":"FYPO:0000812"},{"relation_name":"is_a","term_name":"abnormal vacuole fusion","termid":"FYPO:0006057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuole fusion during vegetative growth","synonyms":[{"name":"abnormal homotypic vacuole fusion during vegetative growth","type":"exact"},{"name":"abnormal vacuole fusion during mitotic cell cycle","type":"related"},{"name":"abnormal vacuole fusion, non-autophagic, during vegetative growth","type":"exact"}],"termid":"FYPO:0004482"}


id: PBO:0028256
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ornithine_carbamoyltransferase_activity","termid":"PBO:0028256"}


id: GO:0044221
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between a nerve fiber of one host neuron and another host neuron or muscle fiber or glial cell; the site of interneuronal communication.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell synapse","termid":"GO:0044221"}


id: PBO:0029369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029369"}


id: PBO:0069965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1260, pseudogene","termid":"PBO:0069965"}


id: PBO:0082130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin assembly factor; C-terminal WCA domain activates Arp2/3 complex-mediated nucleation of branched actin filaments, polyproline domain nucleates actin filaments independent of Arp2/3; mutants are defective in endocytosis, bud site selection, cytokinesis; human homolog WAS (Wiskott-Aldrich Syndrome) implicated in severe immunodeficiency; human WAS complements yeast null mutant, but only in presence of WIPF1, which mediates localization of WAS to cortical patches","termid":"PBO:0082130"}


id: PBO:0036166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein-protein_interaction","termid":"PBO:0036166"}


id: FYPO:0008236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An RNA localization phenotype where the loading of siRNAs onto the RITs complex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA localization to chromatin","termid":"FYPO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal siRNA loading onto RITS complex","termid":"FYPO:0008236"}


id: PBO:0057808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3130-1","termid":"PBO:0057808"}


id: GO:0033072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of vancomycin, (3S,6R,7R,11R,23S,26S,30aS,36R,38aR)-44-[2-O-(3-amino-2,3,6-trideoxy-3-C-methyl-alpha-L-lyxo-hexopyranosyl)-beta-D-glucopyranosyloxy]-3-(carbamoylmethyl)-10,19-dichloro-2,3,4,5,6,7,23,25,26,36,37,38,38a-tetradecahydro-7,22,28,30,32-pentahydroxy-6-(N-methyl-D-leucyl)-2,5,24,38,39-pentaoxo-1H,22H-23,36-(epiminomethano)-8,11:18,21-dietheno-13,16:31,35-di(metheno)[1,6,9]oxadiazacyclohexadecino[4,5-m][10,2,16]benzoxadiazacyclotetracosine-26-carboxylic acid, a complex glycopeptide from Streptomyces orientalis that inhibits a specific step in the synthesis of the peptidoglycan layer in Gram-positive bacteria.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"},{"relation_name":"is_a","term_name":"peptide antibiotic biosynthetic process","termid":"GO:0030651"},{"relation_name":"is_a","term_name":"vancomycin metabolic process","termid":"GO:0033071"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vancomycin biosynthetic process","synonyms":[{"name":"vancomycin anabolism","type":"exact"},{"name":"vancomycin biosynthesis","type":"exact"},{"name":"vancomycin formation","type":"exact"},{"name":"vancomycin synthesis","type":"exact"}],"termid":"GO:0033072"}


id: PBO:0078040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 30","termid":"PBO:0078040"}


id: FYPO:0000902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is abnormal.","definition_xrefs":["GO:0007019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"},{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization","termid":"FYPO:0007111"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule depolymerization during vegetative growth","synonyms":[{"name":"abnormal microtubule catastrophe during vegetative growth","type":"related"},{"name":"abnormal microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule shrinkage during vegetative growth","type":"related"}],"termid":"FYPO:0000902"}


id: PATO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000809 taste value (obsolete PATO:0000809)","termid":"PATO:0000809"}


id: PBO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Slt1 (predicted)","termid":"PBO:0002133"}


id: PBO:0113476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIb of cytochrome c oxidase; cytochrome c oxidase is also known as respiratory Complex IV and is the terminal member of the mitochondrial inner membrane electron transport chain; required for assembly and activity of cytochrome c oxidase; phosphorylated; easily released from the intermembrane space, suggesting a loose association with Complex IV","termid":"PBO:0113476"}


id: GO:0005412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose(out) + Na+(out) = D-glucose(in) + Na+(in).","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"D-glucose:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-429613","Reactome:R-HSA-5656356","Reactome:R-HSA-5658163","MetaCyc:RXN-22596","Reactome:R-HSA-189208","Reactome:R-HSA-8932955"],"synonyms":[{"name":"glucose:sodium symporter activity","type":"exact"},{"name":"sodium/glucose symporter activity","type":"exact"}],"termid":"GO:0005412"}


id: PBO:0079641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 12","termid":"PBO:0079641"}


id: GO:0075071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host autophagy","synonyms":[{"name":"autophagy during symbiotic interaction","type":"related"},{"name":"autophagy involved in symbiotic interaction","type":"related"},{"name":"modulation by symbiont of host autophagic process","type":"related"},{"name":"modulation by symbiont of host autophagy","type":"exact"},{"name":"symbiont-mediated modulation of host autophagy","type":"exact"}],"termid":"GO:0075071"}


id: PBO:0081969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRANB2 antisense RNA 1","termid":"PBO:0081969"}


id: PBO:0085796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; computational analysis of large-scale protein-protein interaction data suggests a possible role in actin cytoskeleton organization; potential Cdc28p substrate","termid":"PBO:0085796"}


id: PBO:0028698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process","termid":"PBO:0028698"}


id: PBO:0049451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 5","termid":"PBO:0049451"}


id: PBO:0077595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 6","termid":"PBO:0077595"}


id: MOD:01792
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal O4'-phospho-L-tyrosine residue to tyrosine immonium ion.","definition_xrefs":["PubMed:18688235","PubMed:17690871"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O4'-phospho-L-tyrosine","termid":"MOD:00048"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotyrosine immonium ion","synonyms":[{"name":"2-(4-phosphonoxyphenyl)ethaniminium","type":"exact"}],"termid":"MOD:01792"}


id: FYPO:0003951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0003951)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during cellular response to heat","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"increased tyrosine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003951"}


id: PBO:0027968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_copper","termid":"PBO:0027968"}


id: PBO:0086458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metallo-dependent hydrolase superfamily protein; similar to AMP deaminases but lacks key catalytic residues and does not rescue purine nucleotide metabolic defect of quadruple aah1 ade8 amd1 his1 mutant; null mutant exhibits longer telomeres, altered Ty mobility, decreased resistance to rapamycin and wortmannin; induced in response to hydrostatic pressure; not an essential gene; YBR284W has a paralog, YJL070C, that arose from the whole genome duplication","termid":"PBO:0086458"}


id: PBO:0076784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonin beta-propeller repeat containing 2","termid":"PBO:0076784"}


id: FYPO:0000943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by normal spore morphology, i.e. the size, shape, and structure of the spore are indistinguishable from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell morphology","termid":"FYPO:0000672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spore morphology","termid":"FYPO:0000943"}


id: GO:0019196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of galactosamine from one side of a membrane to the other. Galactosamine is an aminodeoxysugar; D-galactosamine is a constituent of some glycolipids and glycosaminoglycans, commonly as its N-acetyl derivative.","definition_xrefs":["GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"galactosamine transmembrane transporter activity","secondary_identifiers":["GO:0019195"],"synonyms":[{"name":"galactosamine porter activity","type":"exact"}],"termid":"GO:0019196"}


id: PBO:0036115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_dephosphorylation_during_vegetative_growth","termid":"PBO:0036115"}


id: PBO:0056309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 4 pseudogene 1","termid":"PBO:0056309"}


id: PBO:0047689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLT1 pseudogene 1","termid":"PBO:0047689"}


id: GO:0015498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: pantothenate(out) + Na+(out) = pantothenate(in) + Na+(in).","definition_xrefs":["TC:2.A.21.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"pantothenate:sodium symporter activity","termid":"GO:0015498"}


