# terms

id: GO:0051670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 2,1-beta-D-fructosidic linkages in inulin.","definition_xrefs":["EC:3.2.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inulinase activity","secondary_identifiers":["MetaCyc:3.2.1.7-RXN"],"synonyms":[{"name":"2,1-beta-D-fructan fructanohydrolase activity","type":"exact"},{"name":"endo-inulinase activity","type":"exact"},{"name":"exoinulinase activity","type":"exact"},{"name":"indoinulinase activity","type":"exact"},{"name":"inulase activity","type":"exact"}],"termid":"GO:0051670"}


id: GO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C3d product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"complement component C3d receptor activity","termid":"GO:0001860"}


id: PBO:0080940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zonadhesin","termid":"PBO:0080940"}


id: FYPO:0002747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-lysine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular lysine level","synonyms":[{"name":"normal cellular L-lysine level","type":"exact"},{"name":"normal cellular lysine level during mitotic cell cycle","type":"related"},{"name":"normal cellular lysine level during vegetative growth","type":"exact"},{"name":"normal level of lysine in cell","type":"exact"}],"termid":"FYPO:0002747"}


id: PR:Q09797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22G7.03 gene.","definition_xrefs":["UniProtKB:Q09797","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22G7.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.03","synonyms":[{"name":"Spom972h-SPAC22G7.03","type":"exact"}],"termid":"PR:Q09797"}


id: PBO:0086138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for mismatch repair in mitosis and meiosis; forms a complex with Msh2p to repair both single-base & insertion-deletion mispairs; also involved in interstrand cross-link repair; potentially phosphorylated by Cdc28p; contains PIP motif that binds PCNA (Pol30p) and Rev1p","termid":"PBO:0086138"}


id: GO:0032744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-20 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-20 production","termid":"GO:0032664"},{"relation_name":"positively_regulates","term_name":"interleukin-20 production","termid":"GO:0032624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-20 production","secondary_identifiers":["GO:0045389"],"synonyms":[{"name":"activation of interleukin-20 production","type":"narrow"},{"name":"positive regulation of IL-20 production","type":"exact"},{"name":"positive regulation of interleukin-20 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-20 production","type":"narrow"},{"name":"up regulation of interleukin-20 production","type":"exact"},{"name":"up-regulation of interleukin-20 production","type":"exact"},{"name":"upregulation of interleukin-20 production","type":"exact"}],"termid":"GO:0032744"}


id: PBO:0052596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 4","termid":"PBO:0052596"}


id: PATO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation of shape.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of shape","termid":"PATO:0001929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invariant shape","termid":"PATO:0001931"}


id: FYPO:0005400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to the presence of DNA double-strand breaks is abnormal.","definition_xrefs":["PomBase:mah","PMID:12628934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to DNA double-strand break","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to DNA double-strand break","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to DNA double-strand break during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to DNA double-strand break during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to DNA double-strand break","type":"exact"}],"termid":"FYPO:0005400"}


id: PBO:0061815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 5 Y-linked","termid":"PBO:0061815"}


id: GO:0008904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + hygromycin B = 7''-O-phosphohygromycin B + ADP + 2 H+.","definition_xrefs":["RHEA:23388","EC:2.7.1.119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"hygromycin-B 7''-O-phosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R03770","MetaCyc:HYGROMYCIN-B-KINASE-RXN"],"synonyms":[{"name":"APH(7'') activity","type":"related"},{"name":"ATP:hygromycin-B 7''-O-phosphotransferase activity","type":"related"},{"name":"destomic acid ring 7''-O-phosphotransferase activity","type":"exact"},{"name":"hygromycin B kinase activity","type":"broad"},{"name":"hygromycin B phosphotransferase activity","type":"broad"},{"name":"hygromycin-B kinase activity","type":"broad"}],"termid":"GO:0008904"}


id: PBO:0059919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 5","termid":"PBO:0059919"}


id: PBO:0036107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell-cell_adhesion","termid":"PBO:0036107"}


id: GO:0036483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a neuron. The pathway is induced in response to a stimulus indicating endoplasmic reticulum (ER) stress, and ends when the execution phase of apoptosis is triggered. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen.","definition_xrefs":["GOC:bf","PMID:21113145","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0070059"},{"relation_name":"part_of","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","synonyms":[{"name":"ER stress-induced neuron apoptosis","type":"broad"},{"name":"ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"endoplasmic reticulum stress-induced neuron apoptosis","type":"broad"},{"name":"endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"}],"termid":"GO:0036483"}


id: PBO:0078309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (GTC) 5-1","termid":"PBO:0078309"}


id: GO:0003051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The drinking behavior that is mediated by the action of angiotensin in the brain. Angiotensin stimulates the brain centers that control thirst.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drinking behavior","termid":"GO:0042756"},{"relation_name":"part_of","term_name":"brain renin-angiotensin system","termid":"GO:0002035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiotensin-mediated drinking behavior","synonyms":[{"name":"angiotensin mediated drinking behavior","type":"exact"}],"termid":"GO:0003051"}


id: PBO:0056171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADD antisense RNA 1","termid":"PBO:0056171"}


id: FYPO:0002462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, and elongated.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"branched, elongated, septated cell","termid":"FYPO:0004594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"inviable branched, elongated vegetative cell","secondary_identifiers":["FYPO:0002461"],"synonyms":[{"name":"inviable branched cell during vegetative growth","type":"exact"},{"name":"inviable branched vegetative cell","type":"exact"},{"name":"inviable branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, septated cell","type":"exact"},{"name":"inviable branched, long, septated cell","type":"exact"},{"name":"inviable branched, septated cell","type":"exact"},{"name":"inviable elongated branched cell","type":"exact"},{"name":"lethal; branched, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002462"}


id: PBO:0073698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle and kinetochore associated complex subunit 3","termid":"PBO:0073698"}


id: GO:0046692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to the success of sperm fertilization in multiply-mated females.","definition_xrefs":["PMID:10885514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-organism reproductive process","termid":"GO:0044703"},{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"insemination","termid":"GO:0007320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm competition","secondary_identifiers":["Wikipedia:Sperm_competition"],"termid":"GO:0046692"}


id: PBO:0034171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_presynaptic_terminal_in","termid":"PBO:0034171"}


id: PR:Q9USK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set9 gene.","definition_xrefs":["UniProtKB:Q9USK2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase set9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.12","synonyms":[{"name":"SET domain protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set9","type":"exact"},{"name":"lysine N-methyltransferase 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USK2"}


id: PBO:0063991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 25","termid":"PBO:0063991"}


id: PBO:0040984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 2","termid":"PBO:0040984"}


id: GO:0046066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dGDP, deoxyguanosine diphosphate, (2'-deoxyguanosine 5'-diphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dGDP metabolic process","synonyms":[{"name":"dGDP metabolism","type":"exact"}],"termid":"GO:0046066"}


id: PBO:0003874
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.31","termid":"PBO:0003874"}


id: PBO:0061920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily E member 3 (gene/pseudogene)","termid":"PBO:0061920"}


id: PBO:0031287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_regulation_phenotype","termid":"PBO:0031287"}


id: PR:O14011
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing factor 19 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing factor 19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.08c","secondary_identifiers":["UniProtKB:O14011"],"synonyms":[{"name":"Spom972h-PRPF19","type":"exact"},{"name":"complexed with cdc5 protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14011"}


id: PBO:0066593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOG family member 2, pseudogene","termid":"PBO:0066593"}


id: PBO:0061275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase activator 1","termid":"PBO:0061275"}


id: GO:0097694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of RNA to a specific location in the telomeric region of a chromosome.","definition_xrefs":["GOC:BHF_telomere","PMID:26586433","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of RNA localization","termid":"GO:0051236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of RNA localization to telomere","synonyms":[{"name":"establishment of RNA localisation to telomere","type":"exact"}],"termid":"GO:0097694"}


id: SO:0001418
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An experimental region, defined by a tiling array experiment to be transcribed at some level.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_fragment","synonyms":[{"name":"transcribed fragment","type":"exact"},{"name":"transfrag","type":"related"}],"termid":"SO:0001418"}


id: GO:0018742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of the ether in chloro- or hydroxyepoxypropane to produce chloropropane diol or glycerol. Acts on R enantiomers.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete epoxide hydrolase B activity (obsolete GO:0018742)","termid":"GO:0018742"}


id: GO:0102218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: n ATP + n H2O + starch = n AMP + n hydrogenphosphate + a 6-phosphogluco-amylopectin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete starch, H2O dikinase activity (obsolete GO:0102218)","termid":"GO:0102218"}


id: PBO:0074380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 6","termid":"PBO:0074380"}


id: PBO:0030619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_maltase_activity","termid":"PBO:0030619"}


id: PBO:0077815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible protein 11","termid":"PBO:0077815"}


id: PBO:0083182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the ORF YDL025C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083182"}


id: PATO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in motor and sensory nerves by virtue of the bearer's ability to convey electricity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electrical conductivity","termid":"PATO:0001757"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve conductivity","termid":"PATO:0001758"}


id: PBO:0068736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 7, pseudogene","termid":"PBO:0068736"}


id: PBO:0090874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2340, human C2orf76 ortholog, implicated in mitochondrial organisation","termid":"PBO:0090874"}


id: PBO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family protein (predicted)","termid":"PBO:0002444"}


id: PBO:0081194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein interacting with K protein 1","termid":"PBO:0081194"}


id: PBO:0070668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 39","termid":"PBO:0070668"}


id: GO:0018961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["UM-BBD_pathwayID:pcp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentachlorophenol metabolic process","synonyms":[{"name":"PCP metabolic process","type":"exact"},{"name":"PCP metabolism","type":"exact"},{"name":"pentachlorophenol metabolism","type":"exact"}],"termid":"GO:0018961"}


id: SO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded RNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_sequence_secondary_structure","synonyms":[{"name":"RNA sequence secondary structure","type":"exact"}],"termid":"SO:0000122"}


id: GO:0050837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a selenide-sulfide bond to form the cystine-like L-cysteinyl-L-selenocysteine, as in vertebrate selenopeptide P.","definition_xrefs":["RESID:AA0358"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteinyl-L-selenocysteine (obsolete GO:0050837)","termid":"GO:0050837"}


id: PBO:0069175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 429, pseudogene","termid":"PBO:0069175"}


id: PBO:0005511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside diphosphatase Ynd1","termid":"PBO:0005511"}


id: GO:0018054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent modification of peptidyl-lysine by biotin to form peptidyl-N6-biotinyl-L-lysine.","definition_xrefs":["RESID:AA0117"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine biotinylation (obsolete GO:0018054)","termid":"GO:0018054"}


id: PBO:0028809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_autophosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028809"}


id: GO:0018602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichlorophenoxyacetate + 2-oxoglutarate + oxygen = 2,4-dichlorophenol + glyoxylate + succinate + CO2.","definition_xrefs":["UM-BBD_reactionID:r0274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity","secondary_identifiers":["RHEA:48984","MetaCyc:RXN-9863"],"termid":"GO:0018602"}


id: PBO:0036147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K36_methylation_during_vegetative_growth","termid":"PBO:0036147"}


id: GO:0009920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the cell plate is formed at the equator of the spindle in the dividing cells during early telophase. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:tb","ISBN:0879015322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell plate assembly","termid":"GO:0000919"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"cell plate formation involved in plant-type cell wall biogenesis","synonyms":[{"name":"cell plate formation involved in cellulose and pectin-containing cell wall biogenesis","type":"exact"}],"termid":"GO:0009920"}


id: GO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD8-positive, gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta intraepithelial T cell differentiation","termid":"GO:0002304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"CD8-positive, gamma-delta intraepithelial T cell development","type":"related"},{"name":"CD8-positive, gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD8-positive, gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002305"}


id: PBO:0059184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Morf4 family associated protein 1","termid":"PBO:0059184"}


id: GO:0008065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the barrier between the perineurium of peripheral nerves and the vascular endothelium of endoneurial capillaries. The perineurium acts as a diffusion barrier, but ion permeability at the blood-nerve barrier is still higher than at the blood-brain barrier.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell development","termid":"GO:0001885"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-nerve barrier","synonyms":[{"name":"establishment of blood/nerve barrier","type":"exact"}],"termid":"GO:0008065"}


id: GO:0034759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of iron ions (Fe) from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transport","termid":"GO:0034756"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"iron ion transmembrane transport","termid":"GO:0034755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of iron ion transmembrane transport","synonyms":[{"name":"regulation of iron ion membrane transport","type":"exact"},{"name":"regulation of transmembrane Fe transport","type":"exact"},{"name":"regulation of transmembrane iron ion transport","type":"exact"},{"name":"regulation of transmembrane iron transport","type":"exact"}],"termid":"GO:0034759"}


id: PBO:0001423
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.1","termid":"PBO:0001423"}


id: GO:0046158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ocellus pigments, any general or particular coloring matter in living organisms, found or utilized in the ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["PMID:15176085","GOC:ai","PMID:18421706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"pigment metabolic process involved in pigmentation","termid":"GO:0043474"},{"relation_name":"part_of","term_name":"ocellus pigmentation","termid":"GO:0033060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ocellus pigment metabolic process","synonyms":[{"name":"ocellus pigment metabolism","type":"exact"}],"termid":"GO:0046158"}


id: PBO:0068339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 111","termid":"PBO:0068339"}


id: GO:0061983
data:
  {"annotated_genes":["SJAG_00486","SJAG_00666","SJAG_03090","SJAG_00678","SJAG_04508","SJAG_04853","SJAG_00207","SJAG_00646","SJAG_00145","SJAG_04271","SJAG_03989"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89872,83904],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[102958,103859,101243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007135"},{"annotations":[109394,84038,107841],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045144"},{"annotations":[96226,98390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[91210],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"A process that coontributes to the second meiotic division. The second meiotic division separates chromatids resulting in a haploid number of chromosomes.","definition_xrefs":["PMID:29385397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00207":null,"SJAG_00486":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00678":null,"SJAG_03090":null,"SJAG_03989":null,"SJAG_04271":null,"SJAG_04508":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiosis II cell cycle process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"second meiotic division","type":"exact"}],"termid":"GO:0061983","terms_by_termid":{"GO:0007135":null,"GO:0045144":null,"GO:0051456":null,"GO:1905191":null,"GO:1990950":null}}


id: PR:Q9HFE4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP16F5.08c gene.","definition_xrefs":["UniProtKB:Q9HFE4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiol-specific monooxygenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.08c","synonyms":[{"name":"Spom972h-SPBP16F5.08c","type":"exact"},{"name":"flavin-dependent monooxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFE4"}


id: GO:0031996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a thioesterase.","definition_xrefs":["GOC:dl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"thioesterase binding","synonyms":[{"name":"thiolesterase binding","type":"exact"}],"termid":"GO:0031996"}


id: PR:P36209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sts1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta(24(24(1)))-sterol reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.07c","synonyms":[{"name":"C-24(28) sterol reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sts1","type":"exact"},{"name":"sterol Delta(24(28))-reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36209"}


id: GO:0072233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric thick ascending limb over time, from its formation to the mature structure. The metanephric thick ascending limb is the last part of the metanephric loop of Henle. Its thick, mitochondria-rich epithelium characterizes the outer medulla, and is responsible for very avid active salt transport. At the macula densa, the thick ascending limb connects to the distal convoluted tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thick ascending limb development","termid":"GO:0072023"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric thick ascending limb development","synonyms":[{"name":"metanephric TAL development","type":"exact"}],"termid":"GO:0072233"}


id: PBO:0075459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA8 antisense RNA 1 (head to head)","termid":"PBO:0075459"}


id: GO:0034284
data:
  {"annotated_genes":["SJAG_00574","SJAG_00472","SJAG_04312","SJAG_04026","SJAG_02444","SJAG_03081","SJAG_01754","SJAG_01699","SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112744,97940,102615,105659,105154,90273,102025,111703,102970],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosaccharide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to monosaccharide","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to monosaccharide stimulus","type":"exact"}],"termid":"GO:0034284","terms_by_termid":{"GO:0010619":null}}


id: GO:0052051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other organism by a type II secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type II secretion system (obsolete GO:0052051)","termid":"GO:0052051"}


id: PATO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001009 relative latency value (obsolete PATO:0001009)","termid":"PATO:0001009"}


id: PBO:0054055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1397","termid":"PBO:0054055"}


id: FYPO:0007735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes that can be transcribed by RNA polymerase III is increased during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes","termid":"FYPO:0007734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","synonyms":[{"name":"increased condensin localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"narrow"},{"name":"increased protein localisation to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"increased protein localization to chromatin downstream of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007735"}


id: GO:1905709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the passage or uptake of molecules by a membrane.","definition_xrefs":["PMID:27482894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane permeability","termid":"GO:1905709"}


id: PBO:0070719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 24","termid":"PBO:0070719"}


id: PBO:0074526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C2","termid":"PBO:0074526"}


id: GO:0000417
data:
  {"annotated_genes":["SJAG_00913","SJAG_04561","SJAG_00925","SJAG_00914"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99679,104911,104918,108965],"is_not":false,"summary":null,"term":"GO:0000417"}]},"cv_name":"cellular_component","definition":"A protein complex proposed to be involved in replication-independent nucleosome assembly, by promoting histone deposition onto DNA. For example, in Saccharomyces, the complex contains Hir1p, Hir2p, Hir3p, and Hpc2p.","definition_xrefs":["GOC:mah","PMID:17180700","GOC:elh","PMID:16303565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_04561":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"HIR complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HIRA complex","type":"exact"}],"termid":"GO:0000417","terms_by_termid":{"GO:0000417":null}}


id: PBO:0063748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 13","termid":"PBO:0063748"}


id: GO:0071710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a macromolecule destined to form part of a membrane in a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"membrane biogenesis","termid":"GO:0044091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"membrane macromolecule biosynthetic process","synonyms":[{"name":"membrane macromolecule anabolism","type":"exact"},{"name":"membrane macromolecule biosynthesis","type":"exact"},{"name":"membrane macromolecule formation","type":"exact"},{"name":"membrane macromolecule synthesis","type":"exact"}],"termid":"GO:0071710"}


id: GO:0009545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A leucoplast in which oil is stored.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast","termid":"GO:0009516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"elaioplast","secondary_identifiers":["Wikipedia:Elaioplast"],"termid":"GO:0009545"}


id: PBO:0042374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 receptor 1 like","termid":"PBO:0042374"}


id: GO:0120099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a chaperone or scaffold for centriolar proteins during the maturation of the procentriole. Some of its members may become integrated into the growing centriole. Examples are the CPAP(CENPJ)-STIL complex, CEP192-PLK4 complex or CEP152-PLK4 complex in vertebrates.","definition_xrefs":["PMID:22020124","PMID:24997597","PMID:18207742","PMID:21059844","GOC:bhm","PMID:17576815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"procentriole replication complex","termid":"GO:0120099"}


id: GO:0016119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carotenes, hydrocarbon carotenoids.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"carotene metabolic process","synonyms":[{"name":"carotene metabolism","type":"exact"}],"termid":"GO:0016119"}


id: PBO:0044674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD domain containing 1","termid":"PBO:0044674"}


id: PBO:0076903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 101","termid":"PBO:0076903"}


id: GO:0015278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when a specific intracellular ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"ligand-gated calcium channel activity","termid":"GO:0099604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"intracellularly gated calcium channel activity","secondary_identifiers":["GO:0005218","Reactome:R-HSA-9717215"],"synonyms":[{"name":"calcium-release channel activity","type":"exact"},{"name":"intracellular ligand-gated calcium channel activity","type":"related"}],"termid":"GO:0015278"}


id: GO:0106195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic anions linked to oxidoreductase reactions.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic anions linked to oxidoreductase reactions (obsolete GO:0106195)","secondary_identifiers":["EC:7.3.1.-"],"termid":"GO:0106195"}


id: PR:Q92359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C6G9.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.14","synonyms":[{"name":"Spom972h-puf4","type":"exact"}],"termid":"PR:Q92359"}


id: FYPO:0005417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic spindle elongation begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000337","FYPO:0000054"],"is_obsolete":false,"name":"premature mitotic spindle elongation","synonyms":[{"name":"advanced mitotic spindle elongation","type":"exact"},{"name":"premature mitotic sister chromatid separation during vegetative growth","type":"related"},{"name":"premature spindle elongation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005417"}


id: PBO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degradation is independent of association with Pcu4-DDb1-CSN complex","termid":"PBO:0001303"}


id: PBO:0038606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 3","termid":"PBO:0038606"}


id: PR:O74990
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A conserved oligomeric Golgi complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.13","secondary_identifiers":["UniProtKB:O74990"],"synonyms":[{"name":"COG complex subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COG4","type":"exact"},{"name":"component of oligomeric Golgi complex 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74990"}


id: PBO:0074942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 107","termid":"PBO:0074942"}


id: PBO:0030791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spheroid_vegetative_cell","termid":"PBO:0030791"}


id: PBO:0044606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 12","termid":"PBO:0044606"}


id: PBO:0028149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U2/U5/U6_snRNP_complex_level","termid":"PBO:0028149"}


id: GO:1905465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G-quadruplex DNA unwinding.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26503245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"regulates","term_name":"G-quadruplex DNA unwinding","termid":"GO:0044806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of G-quadruplex DNA unwinding","termid":"GO:1905465"}


id: PBO:0074497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAP25 antisense RNA 1","termid":"PBO:0074497"}


id: GO:1901372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any trehalose biosynthetic process that is involved in ascospore formation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose biosynthetic process involved in ascospore formation (obsolete GO:1901372)","synonyms":[{"name":"mycose biosynthesis involved in ascospore biosynthesis","type":"exact"},{"name":"mycose biosynthesis involved in ascospore formation","type":"exact"},{"name":"mycose biosynthetic process involved in ascospore biosynthesis","type":"exact"},{"name":"mycose biosynthetic process involved in ascospore formation","type":"exact"},{"name":"mykose biosynthesis involved in ascospore biosynthesis","type":"exact"},{"name":"mykose biosynthesis involved in ascospore formation","type":"exact"},{"name":"mykose biosynthetic process involved in ascospore biosynthesis","type":"exact"},{"name":"mykose biosynthetic process involved in ascospore formation","type":"exact"},{"name":"trehalose anabolism involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose anabolism involved in ascospore formation","type":"exact"},{"name":"trehalose biosynthesis involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose biosynthesis involved in ascospore formation","type":"exact"},{"name":"trehalose biosynthetic process involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose formation involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose formation involved in ascospore formation","type":"exact"},{"name":"trehalose synthesis involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose synthesis involved in ascospore formation","type":"exact"}],"termid":"GO:1901372"}


id: PBO:0074329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5","termid":"PBO:0074329"}


id: PBO:0030522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_assembly","termid":"PBO:0030522"}


id: GO:0007477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal part of the body over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"wing disc development","termid":"GO:0035220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notum development","termid":"GO:0007477"}


id: GO:0044608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a C-terminal peptidyl-threonine to form peptidyl-L-threonine methyl ester.","definition_xrefs":["RESID:AA0507"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-threonine methyl ester biosynthetic process from peptidyl-threonine (obsolete GO:0044608)","synonyms":[{"name":"peptidyl-threonine esterification","type":"exact"}],"termid":"GO:0044608"}


id: PBO:0015269
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major transcript in 972 h- is non-functional as it contains a stop codon","termid":"PBO:0015269"}


id: PR:P79083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit I that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02224","PRO:DNx","PANTHER:PTHR19877:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit I (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.05","secondary_identifiers":["UniProtKB:P79083"],"synonyms":[{"name":"Spom972h-EIF3I","type":"exact"},{"name":"eIF-3 39 kDa subunit homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3 p39 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3i (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 3 39 kDa subunit homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of uncontrolled mitosis 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79083"}


id: PBO:0091010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi transport protein Yos1","termid":"PBO:0091010"}


id: GO:0032137
data:
  {"annotated_genes":["SJAG_02226","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102197,112627],"is_not":false,"summary":null,"term":"GO:0032137"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a G/T mispair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"guanine/thymine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G/T mispair binding","type":"exact"},{"name":"T/G mispair binding","type":"exact"},{"name":"thymine/guanine mispair binding","type":"exact"}],"termid":"GO:0032137","terms_by_termid":{"GO:0032137":null}}


id: PBO:0077314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM51 antisense RNA 1","termid":"PBO:0077314"}


id: GO:0019409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The metabolic process in which ammonia (NH3) is oxidized to nitrite (NO2) in the presence of oxygen; enzymatic reactions convert ammonia to hydrazine, and hydrazine to nitrite.","definition_xrefs":["MetaCyc:AMMOXID-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"},{"relation_name":"is_a","term_name":"ammonia oxidation","termid":"GO:0019329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration, using ammonia as electron donor","synonyms":[{"name":"aerobic ammonia oxidation to nitrite via hydrazine","type":"exact"}],"termid":"GO:0019409"}


id: FYPO:0000907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion inheritance is abolished, resulting in the formation of a daughter cell that lacks mitochondria.","definition_xrefs":["GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance during vegetative growth","termid":"FYPO:0000906"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished mitochondrion inheritance during vegetative growth","synonyms":[{"name":"abolished mitochondrion inheritance during mitotic cell cycle","type":"related"},{"name":"asymmetric mitochondrial inheritance during vegetative growth","type":"related"},{"name":"mitochondrion inheritance abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000907"}


id: PBO:0078709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-4","termid":"PBO:0078709"}


id: GO:0006311
data:
  {"annotated_genes":["SJAG_02267","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85326,96635],"is_not":false,"summary":null,"term":"GO:0006311"}]},"cv_name":"biological_process","definition":"The cell cycle process in which genetic information is transferred from one helix to another. It often occurs in association with general genetic recombination events, and is believed to be a straightforward consequence of the mechanisms of general recombination and DNA repair. For example, meiosis might yield three copies of the maternal version of an allele and only one copy of the paternal allele, indicating that one of the two copies of the paternal allele has been changed to a copy of the maternal allele.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02267":null,"SJAG_02460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic gene conversion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"gene conversion without reciprocal crossover","type":"exact"}],"termid":"GO:0006311","terms_by_termid":{"GO:0006311":null}}


id: GO:1905371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ceramide phosphoethanolamine.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","GOC:hjd","PMID:25667419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ceramide phosphoethanolamine metabolic process","synonyms":[{"name":"ceramide phosphoethanolamine metabolism","type":"exact"}],"termid":"GO:1905371"}


id: PBO:0040815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRD4 interacting chromatin remodeling complex associated protein","termid":"PBO:0040815"}


id: PR:Q9P6L7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rim2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6L7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C688.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.09","synonyms":[{"name":"Spom972h-rim2","type":"exact"}],"termid":"PR:Q9P6L7"}


id: GO:0018980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4,5-trichlorophenoxyacetic acid, a chlorinated aromatic compound which is widely used as a herbicide, often as a weed killer for home lawns.","definition_xrefs":["UM-BBD_pathwayID:2,4,5-t"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2,4,5-trichlorophenoxyacetic acid metabolic process","secondary_identifiers":["UM-BBD_pathwayID:2\\,4\\,5-t"],"synonyms":[{"name":"2,4,5-T metabolic process","type":"exact"},{"name":"2,4,5-T metabolism","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid metabolism","type":"exact"}],"termid":"GO:0018980"}


id: GO:0021719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the superior olivary nucleus is generated and organized. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","ISBN:0838580343","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"},{"relation_name":"part_of","term_name":"superior olivary nucleus development","termid":"GO:0021718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus morphogenesis","synonyms":[{"name":"superior olive morphogenesis","type":"related"}],"termid":"GO:0021719"}


id: PBO:0045095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 6","termid":"PBO:0045095"}


id: GO:0009918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-dehydroepisterol = 24-methylenecholesterol.","definition_xrefs":["ISBN:0943088399"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol delta7 reductase activity (obsolete GO:0009918)","synonyms":[{"name":"sterol delta-7 reductase activity","type":"exact"}],"termid":"GO:0009918"}


id: PBO:0069975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1270, pseudogene","termid":"PBO:0069975"}


id: PBO:0068116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 423","termid":"PBO:0068116"}


id: FYPO:0000771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which nuclear pore localization is normal (i.e. indistinguishable from wild type), resulting in a normal spatial arrangement of nuclear pores within the nuclear envelope.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal nuclear pore localization","synonyms":[{"name":"normal NPC localization","type":"exact"},{"name":"normal nuclear pore complex localization","type":"exact"},{"name":"normal nuclear pore distribution","type":"exact"},{"name":"normal nuclear pore localisation","type":"exact"},{"name":"normal nuclear pore localization during mitotic cell cycle","type":"related"},{"name":"normal nuclear pore localization during vegetative growth","type":"exact"}],"termid":"FYPO:0000771"}


id: PBO:0051056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3-3","termid":"PBO:0051056"}


id: PBO:0053548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 555","termid":"PBO:0053548"}


id: GO:1905647
data:
  {"annotated_genes":["SJAG_04718","SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96442,97305],"is_not":false,"summary":null,"term":"GO:1905647"}]},"cv_name":"biological_process","definition":"The directed movement of proline from outside of a cell into the cytoplasmic compartment.","definition_xrefs":["GOC:TermGenie","PMID:24344203","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline transmembrane transport","termid":"GO:0035524"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04637":null,"SJAG_04718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"proline import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902825"],"synonyms":[{"name":"proline import into cell","type":"exact"}],"termid":"GO:1905647","terms_by_termid":{"GO:1905647":null}}


id: GO:0048575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change from vegetative to reproductive phase as a result of detection of, or exposure to, a period of light that falls short of the critical day length. The critical day length varies between species. Although the term is short-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness exceeds the number of hours defined by 24 minus the critical day length.","definition_xrefs":["GOC:jid","ISBN:0709408862","GOC:pj","ISBN:0697037754","ISBN:0582015952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-day photoperiodism","termid":"GO:0048572"},{"relation_name":"is_a","term_name":"photoperiodism, flowering","termid":"GO:0048573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short-day photoperiodism, flowering","synonyms":[{"name":"long-night photoperiodism, flowering","type":"exact"},{"name":"response to long-night, flowering","type":"exact"},{"name":"response to short-day, flowering","type":"exact"},{"name":"short-day photoperiodic control of flowering","type":"exact"},{"name":"short-day photoperiodic control of flowering time","type":"exact"},{"name":"short-day photoperiodic control of inflorescence development","type":"exact"}],"termid":"GO:0048575"}


id: PBO:0045949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like and EMI domain containing 1, pseudogene","termid":"PBO:0045949"}


id: GO:0004132
data:
  {"annotated_genes":["SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104518],"is_not":false,"summary":null,"term":"GO:0004132"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dCMP + H2O = dUMP + NH3.","definition_xrefs":["EC:3.5.4.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dCMP deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:22924","MetaCyc:DCMP-DEAMINASE-RXN","Reactome:R-HSA-73596"],"synonyms":[{"name":"dCMP aminohydrolase activity","type":"related"},{"name":"deoxy-CMP-deaminase activity","type":"related"},{"name":"deoxycytidine monophosphate deaminase activity","type":"related"},{"name":"deoxycytidine-5'-monophosphate aminohydrolase activity","type":"related"},{"name":"deoxycytidine-5'-phosphate deaminase activity","type":"related"},{"name":"deoxycytidylate aminohydrolase activity","type":"related"},{"name":"deoxycytidylate deaminase activity","type":"related"}],"termid":"GO:0004132","terms_by_termid":{"GO:0004132":null}}


id: GO:0072260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric interstitial fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast fate commitment","termid":"GO:0072153"},{"relation_name":"part_of","term_name":"metanephric interstitial fibroblast differentiation","termid":"GO:0072258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast fate commitment","synonyms":[{"name":"metanephros interstitial cell fate commitment","type":"exact"}],"termid":"GO:0072260"}


id: GO:0052144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within its host organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in host (obsolete GO:0052144)","synonyms":[{"name":"negative energy taxis within host","type":"exact"}],"termid":"GO:0052144"}


id: PBO:0034282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_with","termid":"PBO:0034282"}


id: FYPO:0003740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) occurs to a lower extent than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["GO:0034080","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased CENP-A containing chromatin assembly","synonyms":[{"name":"decreased CENP-A containing nucleosome assembly","type":"related"},{"name":"decreased CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"decreased CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"decreased CENP-A deposition","type":"related"},{"name":"decreased CENP-A loading","type":"related"},{"name":"decreased CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"decreased DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"decreased centromere-specific histone exchange","type":"exact"},{"name":"decreased centromere-specific nucleosome assembly","type":"exact"},{"name":"decreased centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"reduced CENP-A containing nucleosome assembly","type":"exact"}],"termid":"FYPO:0003740"}


id: GO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process involved in cell fate commitment that occurs after cell fate specification, in which a cell is irreversibly committed to a cellular developmental fate which is heritable on cell division.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate determination","secondary_identifiers":["Wikipedia:Cell_fate_determination"],"termid":"GO:0001709"}


id: PBO:0086968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit for Glc7p type-1 protein phosphatase (PP1); tethers Glc7p to Gsy2p glycogen synthase, binds Hsf1p heat shock transcription factor, required for induction of some HSF-regulated genes under heat shock; GAC1 has a paralog, PIG1, that arose from the whole genome duplication","termid":"PBO:0086968"}


id: GO:0070631
data:
  {"annotated_genes":["SJAG_03200","SJAG_04558","SJAG_01422","SJAG_05196","SJAG_02332","SJAG_01460"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86160,107587,109004,98929,99573,96691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"},{"annotations":[86161,99574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990608"}]},"cv_name":"biological_process","definition":"Any process in which a spindle pole body is transported to, or maintained in, a specific location. A spindle pole body is a type of microtubule organizing center found in fungal cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular localization","termid":"GO:0051641"},{"relation_name":"is_a","term_name":"microtubule organizing center localization","termid":"GO:0061842"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"spindle pole body localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990944","GO:0071790"],"synonyms":[{"name":"maintenance of spindle pole body localization","type":"narrow"},{"name":"spindle pole body localisation","type":"exact"}],"termid":"GO:0070631","terms_by_termid":{"GO:0140480":null,"GO:1990608":null}}


id: PBO:0059276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L36","termid":"PBO:0059276"}


id: GO:0061219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a mesonephric mesenchyme from an initial condition to its mature state. This process begins with the formation of mesonephric mesenchyme and ends with the mature structure. Mesonephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme development","termid":"GO:0072074"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchyme development","termid":"GO:0061219"}


id: PBO:0112986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase; catalyzes trichothecene 3-O-acetylation, suggesting a possible role in trichothecene biosynthesis; localized to peroxisomes","termid":"PBO:0112986"}


id: PBO:0065943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 pseudogene 3","termid":"PBO:0065943"}


id: PBO:0064625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase 1","termid":"PBO:0064625"}


id: GO:2000874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glyoxylate cycle.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"regulates","term_name":"glyoxylate cycle","termid":"GO:0006097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of glyoxylate cycle","synonyms":[{"name":"regulation of glyoxylate bypass","type":"exact"}],"termid":"GO:2000874"}


id: PBO:0070793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 23","termid":"PBO:0070793"}


id: PBO:0070062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 19, pseudogene","termid":"PBO:0070062"}


id: PBO:0087918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor required for septum destruction after cytokinesis; part of the RAM network that regulates polarity and morphogenesis; NES phosphorylation by RAM network kinase Cbk1p blocks nuclear exit in mother cells during the M/G1 transition, causing asymmetric localization to daughter cell nuclei, and increased Ace2p activity; phosphorylation by Cdc28p and Pho85p prevents nuclear import during cell cycle phases other than cytokinesis; Spt16p is required for nuclear exclusion during G1","termid":"PBO:0087918"}


id: PBO:0069240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 495, pseudogene","termid":"PBO:0069240"}


id: GO:0044720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the size of an imaginal disc-derived wing.","definition_xrefs":["PMID:21393605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of imaginal disc-derived wing size","termid":"GO:0044719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of imaginal disc-derived wing size","termid":"GO:0044720"}


id: FYPO:0003969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a mitotic spindle in an abnormal location. The normal location is centered at the midpoint of, and parallel to, the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0000120","FYPO:0000054"],"is_obsolete":false,"name":"mislocalized mitotic spindle","synonyms":[{"name":"mislocalised mitotic spindle","type":"exact"},{"name":"mislocalized mitotic spindle during vegetative growth","type":"exact"},{"name":"mislocalized spindle during mitosis","type":"exact"},{"name":"mislocalized spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003969"}


id: GO:1905754
data:
  {"annotated_genes":["SJAG_01867","SJAG_03638"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87880,109200],"is_not":false,"summary":null,"term":"GO:1905754"}]},"cv_name":"cellular_component","definition":"Any nucleus that is part of a ascospore-type prospore.","definition_xrefs":["GO_REF:0000064","PMID:26942678","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01867":null,"SJAG_03638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"ascospore-type prospore nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell nucleus of ascospore-type prospore","type":"exact"},{"name":"nucleus of ascospore-type prospore","type":"exact"}],"termid":"GO:1905754","terms_by_termid":{"GO:1905754":null}}


id: PBO:0060338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 3","termid":"PBO:0060338"}


id: PBO:0064904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 catalytic subunit gamma","termid":"PBO:0064904"}


id: GO:0005921
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction composed of pannexins or innexins and connexins, two different families of channel-forming proteins.","definition_xrefs":["GOC:mah","GOC:mtg_muscle","Wikipedia:Gap_junction","ISBN:0815332181","PMID:22366062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gap junction","secondary_identifiers":["NIF_Subcellular:sao118541872"],"synonyms":[{"name":"communicating junction","type":"exact"},{"name":"electrical synapse","type":"related"},{"name":"electrotonic synapse","type":"related"},{"name":"gap junction macula","type":"exact"},{"name":"gap junction plaque","type":"exact"},{"name":"intercellular gap junction channel","type":"related"},{"name":"macula communicans","type":"exact"},{"name":"zonula communicans","type":"exact"}],"termid":"GO:0005921"}


id: PBO:0091516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi1","termid":"PBO:0091516"}


id: PBO:0070169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 83 pseudogene","termid":"PBO:0070169"}


id: GO:0017175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of 5'-ribonucleotides to ribonucleosides and phosphate, with specificity for IMP or GMP 5'-ribonucleotides and H2O as a nucleophile.","definition_xrefs":["EC:3.1.3.5","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete IMP-GMP specific 5'-nucleotidase activity (obsolete GO:0017175)","synonyms":[{"name":"IMP-GMP specific 5'-nucleotidase activity","type":"exact"}],"termid":"GO:0017175"}


id: PBO:0031331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_canavanine","termid":"PBO:0031331"}


id: PBO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase (predicted)","termid":"PBO:0000221"}


id: PBO:0017434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_during","termid":"PBO:0017434"}


id: PBO:0068440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 14, pseudogene","termid":"PBO:0068440"}


id: PBO:0084281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the ER; physically interacts with Kre6p; has a role in the synthesis of beta-1,6-glucan in the cell wall; required for cell viability","termid":"PBO:0084281"}


id: GO:1902621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of an actomyosin contractile ring into its constituent components.","definition_xrefs":["PMID:22891673","PMID:14602073"],"gene_count":0,"genotype_count":0,"name":"obsolete actomyosin contractile ring disassembly (obsolete GO:1902621)","termid":"GO:1902621"}


id: GO:0002629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of proteolysis associated with antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002584"},{"relation_name":"is_a","term_name":"regulation of proteolysis associated with antigen processing and presentation","termid":"GO:0002628"},{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"negative regulation of proteolysis involved in protein catabolic process","termid":"GO:1903051"},{"relation_name":"negatively_regulates","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0030163"],"is_obsolete":false,"name":"negative regulation of proteolysis associated with antigen processing and presentation","synonyms":[{"name":"down regulation of proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"down-regulation of proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"downregulation of proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"inhibition of proteolysis associated with antigen processing and presentation","type":"narrow"}],"termid":"GO:0002629"}


id: PATO:0000400
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000400 morphology value (obsolete PATO:0000400)","termid":"PATO:0000400"}


id: GO:0047628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + thymidine = AMP + thymidine 5'-phosphate.","definition_xrefs":["MetaCyc:ADP--THYMIDINE-KINASE-RXN","EC:2.7.1.118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"ADP-thymidine kinase activity","secondary_identifiers":["RHEA:13413"],"synonyms":[{"name":"ADP:dThd phosphotransferase activity","type":"related"},{"name":"ADP:thymidine 5'-phosphotransferase activity","type":"related"},{"name":"adenosine diphosphate-thymidine phosphotransferase activity","type":"related"}],"termid":"GO:0047628"}


id: PBO:0083845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome core complex catalytic subunit; has both endonuclease and 3'-5' exonuclease activity; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; role in degradation of tRNAs; similar to E. coli RNase R and to human DIS3, which partially complements dis3-81 heat sensitivity; mutations in Dis3p analogous to human mutations implicated in multiple myeloma impair exosome function; protein abundance increases under to DNA replication stress","termid":"PBO:0083845"}


id: GO:0086013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the cardiac muscle cell plasma membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during action potential","termid":"GO:0086011"},{"relation_name":"is_a","term_name":"cardiac muscle cell membrane repolarization","termid":"GO:0099622"},{"relation_name":"part_of","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"}


id: GO:0046345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"apocarotenoid catabolic process","termid":"GO:0043290"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"abscisic acid catabolic process","synonyms":[{"name":"abscisic acid breakdown","type":"exact"},{"name":"abscisic acid catabolism","type":"exact"},{"name":"abscisic acid degradation","type":"exact"}],"termid":"GO:0046345"}


id: PBO:0079187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 16, pseudogene","termid":"PBO:0079187"}


id: PBO:0040847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 2","termid":"PBO:0040847"}


id: GO:0042796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template by RNA Polymerase III (Pol III), originating at a Pol III promoter.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"},{"relation_name":"is_a","term_name":"snRNA transcription","termid":"GO:0009301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016073","GO:0006351"],"is_obsolete":false,"name":"snRNA transcription by RNA polymerase III","synonyms":[{"name":"snRNA transcription from Pol III promoter","type":"exact"},{"name":"snRNA transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0042796"}


id: PBO:0074938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 103C","termid":"PBO:0074938"}


id: PBO:0028978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sodium_hypochlorite","termid":"PBO:0028978"}


id: FYPO:0005410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) during mitosis. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein degradation during mitosis","synonyms":[{"name":"normal protein breakdown during mitosis","type":"exact"},{"name":"normal protein catabolic process during mitosis","type":"exact"},{"name":"normal protein catabolism during mitosis","type":"exact"},{"name":"normal protein degradation during mitosis during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein degradation during mitotic M phase","type":"related"},{"name":"normal protein degradation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005410"}


id: GO:1900342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from dimethyl sulfide","termid":"GO:1900342"}


id: PBO:0068532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 133, pseudogene","termid":"PBO:0068532"}


id: GO:2001086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a laminarabioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete laminarabiose transport (obsolete GO:2001086)","termid":"GO:2001086"}


id: GO:0007491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the sternite are generated and organized. The sternite is the plate or sclerite on the underside of a body segment.","definition_xrefs":["GOC:jid","PMID:16451739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"histoblast morphogenesis","termid":"GO:0007488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sternite morphogenesis","termid":"GO:0007491"}


id: PBO:0062751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily K member 3 pseudogene","termid":"PBO:0062751"}


id: PBO:0051176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-64D","termid":"PBO:0051176"}


id: PBO:0111857
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 family co-repressor","termid":"PBO:0111857"}


id: GO:0042379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chemokine receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"},{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chemokine receptor binding","synonyms":[{"name":"chemokine receptor ligand","type":"narrow"}],"termid":"GO:0042379"}


id: PBO:0057504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 622","termid":"PBO:0057504"}


id: GO:1903911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor clustering.","definition_xrefs":["GOC:TermGenie","PMID:23575248","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor clustering","synonyms":[{"name":"activation of receptor clustering","type":"narrow"},{"name":"up regulation of receptor clustering","type":"exact"},{"name":"up-regulation of receptor clustering","type":"exact"},{"name":"upregulation of receptor clustering","type":"exact"}],"termid":"GO:1903911"}


id: PBO:0078849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 4 associated protein","termid":"PBO:0078849"}


id: GO:0043505
data:
  {"annotated_genes":["SJAG_00307"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98153],"is_not":false,"summary":null,"term":"GO:0043505"}]},"cv_name":"cellular_component","definition":"A form of nucleosome located only at the centromere, in which the histone H3 is replaced by the variant form CENP-A (sometimes known as CenH3).","definition_xrefs":["PMID:16183641","GOC:go_curators","PMID:15175412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome","termid":"GO:0000786"},{"relation_name":"part_of","term_name":"CENP-A containing chromatin","termid":"GO:0061638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"CENP-A containing nucleosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CENP-S-T-W-X","type":"exact"},{"name":"CNP-T-W-S-X complex","type":"exact"},{"name":"CenH3 containing nucleosome","type":"exact"},{"name":"centromere specific nucleosome","type":"related"},{"name":"centromere-specific nucleosome","type":"related"},{"name":"centromeric nucleosome","type":"related"}],"termid":"GO:0043505","terms_by_termid":{"GO:0043505":null}}


id: PATO:0005016
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being enclosed on all sides by another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surrounded by","synonyms":[{"name":"enclosed by","type":"exact"}],"termid":"PATO:0005016"}


id: GO:0015341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a zinc ion or zinc ions from the inside of the cell to the outside of the cell across a membrane: Zn2+(out) = Zn2+(in). The activity is driven by proton motive force.","definition_xrefs":["TC:2.A.4.2.3","GOC:mtg_transport","TC:2.A.4.1.4","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"},{"relation_name":"is_a","term_name":"zinc efflux transmembrane transporter activity","termid":"GO:0022883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"zinc efflux active transmembrane transporter activity","synonyms":[{"name":"zinc efflux permease activity","type":"broad"}],"termid":"GO:0015341"}


id: FYPO:0006256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin unloading is normal (i.e. indistinguishable from wild type). Cohesin unloading is the topological unlinking of a cohesin ring complex from chromatin, which negatively regulates sister chromatid cohesion.","definition_xrefs":["GO:0061781","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal regulation of molecular function","termid":"FYPO:0004919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic cohesin unloading","synonyms":[{"name":"normal cohesin unloading during mitotic cell cycle","type":"exact"},{"name":"normal cohesin unloading during vegetative growth","type":"exact"}],"termid":"FYPO:0006256"}


id: PBO:0029061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_present_in_increased_numbers","termid":"PBO:0029061"}


id: GO:0097721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Golgi-derived vesicle to which the ciliary basal body docks via its transitional fibers. Its membrane is compositionally distinct from Golgi membranes, and will become the ciliary membrane once the ciliary vesicle is fused to the plasma membrane. The ciliary vesicle is thought to be formed by multiple smaller vesicles that attach to the transitional fibers and then fuse to form a larger vesicle.","definition_xrefs":["GOC:cilia","PMID:13978319","PMID:25686250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"ciliary vesicle","synonyms":[{"name":"CV","type":"related"},{"name":"primary ciliary vesicle","type":"exact"}],"termid":"GO:0097721"}


id: PBO:0060553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of P-body association","termid":"PBO:0060553"}


id: PBO:0047073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member B","termid":"PBO:0047073"}


id: GO:1903424
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96910,109907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"}]},"cv_name":"biological_process","definition":"The process in which fluoride is transported across a membrane.","definition_xrefs":["PMID:24173035","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"fluoride transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fluoride membrane transport","type":"exact"},{"name":"transmembrane fluoride transport","type":"exact"}],"termid":"GO:1903424","terms_by_termid":{"GO:0140116":null}}


id: PBO:0029081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_spindle_pole_body","termid":"PBO:0029081"}


id: PBO:0011503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur ATPase involved in ribosome biogenesis and translation Rli1 (predicted)","termid":"PBO:0011503"}


id: GO:0033164
data:
  {"annotated_genes":["SJAG_04770","SJAG_00295","SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83547,87249],"is_not":false,"summary":null,"term":"GO:0033164"},{"annotations":[98403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102704"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->6)-D-mannosyl-D-mannose linkage.","definition_xrefs":["PMID:2644248","PMID:16878994","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,6-mannosyltransferase activity","termid":"GO:0000009"},{"relation_name":"is_a","term_name":"glycolipid mannosyltransferase activity","termid":"GO:0004376"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_03056":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycolipid 1,6-alpha-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.4.1.232","MetaCyc:2.4.1.232-RXN"],"synonyms":[{"name":"GDP-mannose:glycolipid 1,6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:oligosaccharide 1,6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:oligosaccharide 6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"glycolipid 6-alpha-mannosyltransferase activity","type":"exact"},{"name":"initiation-specific alpha-1,6-mannosyltransferase activity","type":"related"}],"termid":"GO:0033164","terms_by_termid":{"GO:0033164":null,"GO:0102704":null}}


id: GO:0047709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bis(2-ethylhexyl)phthalate + H2O = 2-ethylhexan-1-ol + 2-ethylhexyl phthalate + H+.","definition_xrefs":["EC:3.1.1.60","RHEA:15529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"bis(2-ethylhexyl)phthalate esterase activity","secondary_identifiers":["MetaCyc:BIS2-ETHYLHEXYLPHTHALATE-ESTERASE-RXN","KEGG_REACTION:R04202"],"synonyms":[{"name":"DEHP esterase activity","type":"related"},{"name":"bis(2-ethylhexyl)phthalate acylhydrolase activity","type":"related"}],"termid":"GO:0047709"}


id: PBO:0072946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 26B","termid":"PBO:0072946"}


id: GO:1990235
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of diamine N-acetyltransferase activity.","definition_xrefs":["GOC:bhm","PMID:8077207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase complex","termid":"GO:1902493"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"diamine N-acetyltransferase complex","synonyms":[{"name":"SAT complex","type":"narrow"},{"name":"SAT tetramer","type":"narrow"},{"name":"spermidine acetyltransferase complex","type":"narrow"}],"termid":"GO:1990235"}


id: PBO:0055129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2548","termid":"PBO:0055129"}


id: PBO:0047179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 199, Y-linked, pseudogene","termid":"PBO:0047179"}


id: GO:0043471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of carbohydrates, carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular carbohydrate catabolic process (obsolete GO:0043471)","termid":"GO:0043471"}


id: PBO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBY1 interacting BAR domain containing 2","termid":"PBO:0043131"}


id: FYPO:0000700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"},{"relation_name":"is_a","term_name":"increased DNA N-glycosylase activity","termid":"FYPO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000700"}


id: GO:0050698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + proteoglycan = adenosine 3',5'-bisphosphate + proteoglycan sulfate. A proteoglycan is a glycoprotein whose carbohydrate units are glycosaminoglycans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"proteoglycan sulfotransferase activity","synonyms":[{"name":"proteoglycan sulfate transfer","type":"related"},{"name":"proteoglycan sulphotransferase activity","type":"exact"}],"termid":"GO:0050698"}


id: MOD:01000
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of an L-tyrosine residue with one bromine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brominated tyrosine","termid":"MOD:00988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated tyrosine","synonyms":[{"name":"Br1Tyr","type":"exact"}],"termid":"MOD:01000"}


id: PBO:0051168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-52 (pseudogene)","termid":"PBO:0051168"}


id: PBO:0040967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 38","termid":"PBO:0040967"}


id: PBO:0067174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 230, pseudogene","termid":"PBO:0067174"}


id: PBO:0056811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 4B pseudogene 1","termid":"PBO:0056811"}


id: GO:0019207
data:
  {"annotated_genes":["SJAG_05978","SJAG_00236","SJAG_01245","SJAG_03618","SJAG_04200","SJAG_05030","SJAG_00424","SJAG_02332","SJAG_04509","SJAG_03695","SJAG_01821","SJAG_03090","SJAG_04502","SJAG_02232","SJAG_03931","SJAG_03525","SJAG_00333","SJAG_01411","SJAG_00613","SJAG_02699","SJAG_00100","SJAG_01716","SJAG_04614","SJAG_00973","SJAG_02404","SJAG_02191","SJAG_02057","SJAG_03699","SJAG_02026","SJAG_03936","SJAG_01605","SJAG_04666","SJAG_01274","SJAG_00457","SJAG_01210","SJAG_05017","SJAG_03371","SJAG_00142","SJAG_03453","SJAG_01213","SJAG_02154","SJAG_04020","SJAG_00318","SJAG_01000","SJAG_02785","SJAG_00439","SJAG_01401","SJAG_03591","SJAG_03802","SJAG_03340","SJAG_01118","SJAG_04140","SJAG_01020","SJAG_02605","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098744"},{"annotations":[96532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[88164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019912"},{"annotations":[97716,108243,101134,107355,105015,107065,109135,113262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[105034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[84254,98970,102095,104497,102481,87769,100454,102384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016538"},{"annotations":[91160,98198,91161,98199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019210"},{"annotations":[90678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035014"},{"annotations":[83872,87333,113462,114972,105978,95171,112503,95170,106671,105977,107590,115093,103276,115094,85252,108641,95279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030295"},{"annotations":[111495,103147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[114565,93825,93954,112324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019887"},{"annotations":[88456,105410,114552,96075,109136,87213,113463,101245,87165,87212,85267,85474,106692,83941,86887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"},{"annotations":[104547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"}]},"cv_name":"molecular_function","definition":"Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00236":null,"SJAG_00296":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_00613":null,"SJAG_00973":null,"SJAG_01000":null,"SJAG_01020":null,"SJAG_01118":null,"SJAG_01210":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_01716":null,"SJAG_01821":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02404":null,"SJAG_02605":null,"SJAG_02699":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03802":null,"SJAG_03931":null,"SJAG_03936":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_04666":null,"SJAG_05017":null,"SJAG_05030":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"kinase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019207","terms_by_termid":{"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0016538":null,"GO:0019210":null,"GO:0019887":null,"GO:0019912":null,"GO:0030291":null,"GO:0030295":null,"GO:0035014":null,"GO:0043539":null,"GO:0061575":null,"GO:0098744":null}}


id: FYPO:0000554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which pseudohyphal growth is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell growth","termid":"FYPO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal pseudohyphal growth","secondary_identifiers":["FYPO:0000439"],"synonyms":[{"name":"filamentous growth: normal","type":"broad"},{"name":"normal filamentous growth","type":"broad"},{"name":"pseudohyphal growth: normal","type":"related"}],"termid":"FYPO:0000554"}


id: PBO:0082681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-II complex; contains the GLUE (GRAM Like Ubiquitin binding in EAP45) domain which is involved in interactions with ESCRT-I and ubiquitin-dependent sorting of proteins into the endosome; plays a role in the formation of mutant huntingtin (Htt) aggregates in yeast","termid":"PBO:0082681"}


id: GO:1901822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving delta-carotene.","definition_xrefs":["PMID:8837512","MetaCyc:PWY-5946","UniPathway:UPA00801","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"delta-carotene metabolic process","synonyms":[{"name":"delta-carotene metabolism","type":"exact"}],"termid":"GO:1901822"}


id: PBO:0090729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L40","termid":"PBO:0090729"}


id: PBO:0077571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM276-ZFTRAF1 readthrough","termid":"PBO:0077571"}


id: PR:Q9UUF0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisome biogenesis factor 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23350:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome biogenesis factor 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.10","secondary_identifiers":["UniProtKB:Q9UUF0"],"synonyms":[{"name":"Spom972h-PEX10","type":"exact"},{"name":"peroxin-10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisomal biogenesis factor 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisome assembly protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi036","type":"related"}],"termid":"PR:Q9UUF0"}


id: PBO:0111442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation inhibitor, IMPACT domain protein","termid":"PBO:0111442"}


id: GO:0030192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulates the activity of chaperones of the Hsp70/Hsc70 class.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp70/Hsc70 protein regulator activity (obsolete GO:0030192)","synonyms":[{"name":"Hsp70/Hsc70 protein regulator activity","type":"exact"}],"termid":"GO:0030192"}


id: GO:0008597
data:
  {"annotated_genes":["SJAG_03793","SJAG_04871"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84763,114757],"is_not":false,"summary":null,"term":"GO:0008597"}]},"cv_name":"molecular_function","definition":"Binds to and modulates of the activity of the enzyme calcium-dependent protein serine/threonine phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03793":null,"SJAG_04871":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"calcium-dependent protein serine/threonine phosphatase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-139906"],"synonyms":[{"name":"calcium-dependent protein serine/threonine phosphatase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008597","terms_by_termid":{"GO:0008597":null}}


id: GO:0031295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte costimulation","termid":"GO:0031294"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"T cell costimulation","synonyms":[{"name":"T cell co-stimulation","type":"exact"},{"name":"T lymphocyte costimulation","type":"exact"},{"name":"T-cell co-stimulation","type":"exact"},{"name":"T-cell costimulation","type":"exact"},{"name":"T-lymphocyte costimulation","type":"exact"}],"termid":"GO:0031295"}


id: MOD:01960
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-glutamine residue and a four-iron four-sulfur cluster to tris-L-cysteinyl L-glutamin-O6-yl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0605","PubMed:11796730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamine residue","termid":"MOD:02069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl L-glutamin-O6-yl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"tris-L-cysteinyl L-glutamin-O6-yl tetrairon tetrasulfide","type":"exact"},{"name":"tris-mu3-sulfido-tris(cysteinato)-1kappaS,2kappaS,3kappaS-glutaminato-4kappaN(5)-tetrairon","type":"exact"}],"termid":"MOD:01960"}


id: PBO:0045804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDRF1 antisense RNA 1","termid":"PBO:0045804"}


id: PBO:0076670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 2C","termid":"PBO:0076670"}


id: GO:0140206
data:
  {"annotated_genes":["SJAG_01983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99123],"is_not":false,"summary":null,"term":"GO:0140206"}]},"cv_name":"biological_process","definition":"The directed movement of a dipeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:22226946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dipeptide transmembrane transport","termid":"GO:0035442"},{"relation_name":"is_a","term_name":"oligopeptide import across plasma membrane","termid":"GO:0140205"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"dipeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140206","terms_by_termid":{"GO:0140206":null}}


id: GO:0001889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes.","definition_xrefs":["GOC:add","ISBN:068340007X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"hepaticobiliary system development","termid":"GO:0061008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"liver development","termid":"GO:0001889"}


id: PBO:0081014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB46 antisense RNA 2","termid":"PBO:0081014"}


id: PBO:0004241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane translocase Oxa102","termid":"PBO:0004241"}


id: GO:0048179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as an activin receptor. Heterodimeric activin receptors, comprising one Type I activin receptor and one Type II receptor polypeptide, and heterotrimeric receptors have been observed.","definition_xrefs":["PMID:8622651","PMID:8307945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"activin receptor complex","termid":"GO:0048179"}


id: PBO:0057344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 532","termid":"PBO:0057344"}


id: GO:0044609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that associates with mRNP particles and RNA polymerase II and is proposed to integrate transcript elongation with the regulation of alternative splicing. In humans it is composed of the proteins KIAA1967/DBC1 and ZNF326/ZIRD.","definition_xrefs":["PMID:22446626","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DBIRD complex","termid":"GO:0044609"}


id: PBO:0066429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like estrogen regulated growth inhibitor","termid":"PBO:0066429"}


id: GO:0004719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester.","definition_xrefs":["EC:2.1.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"protein carboxyl O-methyltransferase activity","termid":"GO:0051998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740","GO:0008276","GO:0140096"],"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.77-RXN","RHEA:12705","Reactome:R-HSA-5676966"],"synonyms":[{"name":"D-aspartyl/L-isoaspartyl methyltransferase activity","type":"related"},{"name":"L-aspartyl/L-isoaspartyl protein methyltransferase activity","type":"related"},{"name":"L-isoaspartyl protein carboxyl methyltransferase activity","type":"related"},{"name":"L-isoaspartyl/D-aspartyl protein carboxyl methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:protein-L-isoaspartate O-methyltransferase activity","type":"related"},{"name":"protein (D-aspartate) methyltransferase activity","type":"related"},{"name":"protein D-aspartate methyltransferase activity","type":"related"},{"name":"protein L-isoaspartate methyltransferase activity","type":"related"},{"name":"protein L-isoaspartyl methyltransferase activity","type":"related"},{"name":"protein O-methyltransferase (L-isoaspartate)","type":"related"},{"name":"protein beta-aspartate O-methyltransferase activity","type":"related"},{"name":"protein-L-isoaspartate O-methyltransferase activity","type":"related"},{"name":"protein-L-isoaspartate(D-aspartate) O-methyltransferase activity","type":"related"},{"name":"protein-beta-aspartate O-methyltransferase activity","type":"related"}],"termid":"GO:0004719"}


id: PBO:0071136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22","termid":"PBO:0071136"}


id: PBO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.36","termid":"PBO:0001114"}


id: PBO:0046529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 29","termid":"PBO:0046529"}


id: GO:0009975
data:
  {"annotated_genes":["SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004016"}]},"cv_name":"molecular_function","definition":"Catalysis of a ring closure reaction.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01254":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009975","terms_by_termid":{"GO:0004016":null}}


id: GO:0018221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent attachment of a palmitoyl group to an oxygen (O) atom in a serine residue to form peptidyl-O-palmitoyl-L-serine.","definition_xrefs":["RESID:AA0080"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine palmitoylation (obsolete GO:0018221)","synonyms":[{"name":"peptidyl-serine O-palmitoylation","type":"exact"}],"termid":"GO:0018221"}


id: PBO:0065934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 8","termid":"PBO:0065934"}


id: PBO:0001586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase (predicted)","termid":"PBO:0001586"}


id: PBO:0061600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBP iron-sulfur cluster assembly factor 1, cytosolic","termid":"PBO:0061600"}


id: GO:0043720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-keto-5-aminohexanoate + acetyl-CoA = L-3-aminobutyryl-CoA + acetoacetate.","definition_xrefs":["MetaCyc:R125-RXN","PMID:13064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"3-keto-5-aminohexanoate cleavage activity","secondary_identifiers":["RHEA:31555"],"synonyms":[{"name":"3-keto-5-aminohexanoate cleavage enzyme","type":"exact"}],"termid":"GO:0043720"}


id: GO:0061829
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Actin-based structures involved in establishing the blood-testis barrier of the Sertoli cell.","definition_xrefs":["PMID:20403871","PMID:22510523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tubulobulbar complex","termid":"GO:0036284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"basal tubulobulbar complex","synonyms":[{"name":"basal TBC","type":"exact"}],"termid":"GO:0061829"}


id: PBO:0081191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 4","termid":"PBO:0081191"}


id: PR:Q10412
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsc58 gene.","definition_xrefs":["UniProtKB:Q10412","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit rsc58 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.07c","synonyms":[{"name":"RSC complex subunit rsc58 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rsc58","type":"exact"}],"termid":"PR:Q10412"}


id: PBO:0026826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_DNA_strand_elongation_involved_in_mitotic_DNA_replication","termid":"PBO:0026826"}


id: RO:0002235
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite-of relationship in which the host is a plant and the parasite that attaches to the host stem (PO:0009047)","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem_parasite_of","termid":"RO:0002235"}


id: GO:0033985
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of an acidocalcisome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"acidocalcisome","termid":"GO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"acidocalcisome lumen","termid":"GO:0033985"}


id: GO:0015802
data:
  {"annotated_genes":["SJAG_04983","SJAG_03400","SJAG_01923","SJAG_01636","SJAG_01336","SJAG_00051","SJAG_03256","SJAG_00877","SJAG_04725","SJAG_02029","SJAG_02716","SJAG_04715"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86427],"is_not":false,"summary":null,"term":"GO:0015802"},{"annotations":[86426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[90639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[63585,84474,100146,100145,100147,100148,93416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[99954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[94904,62733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[93432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[99958,98911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[99959,106167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01923":null,"SJAG_02029":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04715":null,"SJAG_04725":null,"SJAG_04983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"basic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015802","terms_by_termid":{"GO:0015802":null,"GO:0034488":null,"GO:0034490":null,"GO:0089708":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null,"GO:1901482":null,"GO:1903826":null,"GO:1990822":null}}


id: GO:0004955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a prostaglandin (PG) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor activity","termid":"GO:0004954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostaglandin receptor activity","termid":"GO:0004955"}


id: PR:O42965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19G7.17 gene.","definition_xrefs":["UniProtKB:O42965","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19G7.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.17","synonyms":[{"name":"Spom972h-SPBC19G7.17","type":"exact"}],"termid":"PR:O42965"}


id: PR:O43031
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf28 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.02c","synonyms":[{"name":"Spom972h-cwf28","type":"exact"},{"name":"complexed with cdc5 protein 28 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43031"}


id: GO:0090444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and the rate at which this time point is reached.","definition_xrefs":["PMID:17550772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode larval development, heterochronic","termid":"GO:0090444"}


id: PBO:0042956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 10","termid":"PBO:0042956"}


id: GO:1990169
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93442],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010273"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by a copper ion stimulus.","definition_xrefs":["PMID:23437011","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to copper ion","termid":"GO:0046688"},{"relation_name":"is_a","term_name":"stress response to metal ion","termid":"GO:0097501"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress response to copper ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to copper ion stress","type":"exact"},{"name":"response to copper toxicity","type":"related"},{"name":"stress response to copper","type":"broad"}],"termid":"GO:1990169","terms_by_termid":{"GO:0010273":null}}


id: GO:1901806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucoside.","definition_xrefs":["PMID:15205427","Unipathway:UPA00237","GOC:TermGenie","PMID:16390337","GOC:yaf","PMID:8990303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-glucoside biosynthetic process","synonyms":[{"name":"beta-glucoside anabolism","type":"exact"},{"name":"beta-glucoside biosynthesis","type":"exact"},{"name":"beta-glucoside formation","type":"exact"},{"name":"beta-glucoside synthesis","type":"exact"}],"termid":"GO:1901806"}


id: GO:0051088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic cleavage of transmembrane proteins and release of their ectodomain that occurs after induction by phorbol-12-myristate-13-acetate (PMA), a protein kinase C agonist.","definition_xrefs":["PMID:12714508"],"gene_count":0,"genotype_count":0,"name":"obsolete PMA-inducible membrane protein ectodomain proteolysis (obsolete GO:0051088)","termid":"GO:0051088"}


id: SO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice variant that changes the 2 base pair region at the 5' end of an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site_variant","termid":"SO:0001629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"Jannovar:splice_donor_variant","type":"exact"},{"name":"Seattleseq:splice-donor","type":"exact"},{"name":"VAAST:splice_donor_variant","type":"exact"},{"name":"VEP:splice_donor_variant","type":"exact"},{"name":"snpEff:SPLICE_SITE_DONOR","type":"exact"},{"name":"splice donor variant","type":"exact"}],"termid":"SO:0001575"}


id: PBO:0087803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored plasma membrane protein with a conserved CYSTM module; predicted to be palmitoylated; has similarity to hydrophilins, which are involved in the adaptive response to hyperosmotic conditions; YBR016W has a paralog, YDL012C, that arose from the whole genome duplication","termid":"PBO:0087803"}


id: MOD:01567
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01567"}


id: GO:0052630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + N-acetyl-alpha-D-galactosamine 1-phosphate = diphosphate + UDP-N-acetyl-D-galactosamine.","definition_xrefs":["EC:2.7.7.83","RHEA:34363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine diphosphorylase activity","synonyms":[{"name":"N-acetylgalactosamine 1-phosphate uridylyltransferase","type":"exact"},{"name":"N-acetylgalactosamine-1-phosphate uridyltransferase activity","type":"exact"},{"name":"UDP-GalNAc pyrophosphorylase activity","type":"exact"},{"name":"UDP-N-acetylgalactosamine pyrophosphorylase activity","type":"exact"},{"name":"UDP-acetylgalactosamine pyrophosphorylase activity","type":"exact"},{"name":"UTP:2-acetamido-2-deoxy-alpha-D-galactose-1-phosphate uridylyltransferase activity","type":"exact"},{"name":"UTP:N-acetyl-alpha-D-galactosamine-1-phosphate uridylyltransferase activity","type":"exact"},{"name":"uridine diphosphate-N-acetylgalactosamine pyrophosphorylase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine phosphorylase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine pyrophosphorylase activity","type":"exact"}],"termid":"GO:0052630"}


id: FYPO:0008088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the oscillations of homologous chromosomes which occurs at meiotic metaphase I is abolished.","definition_xrefs":["PMID:33529549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome oscillation at meiotic metaphase I","termid":"FYPO:0008098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished chromosome oscillation at meiotic metaphase I","synonyms":[{"name":"loss of chromosome oscillation at meiotic metaphase I","type":"exact"}],"termid":"FYPO:0008088"}


id: RO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from some initial location l to some destination.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_transport_to_from_or_in","termid":"RO:0002344"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_target_start_location","termid":"RO:0002338"}


id: MOD:01178
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to S-(aspart-4-yloxy) thiocarbonate.","definition_xrefs":["PubMed:16627948","RESID:AA0432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(aspart-4-yloxy) thiocarbonate","synonyms":[{"name":"(2S)-2-amino-4-(carboxysulfanyl)oxy-4-oxobutanoic acid","type":"exact"},{"name":"4-aspartyloxysulfanylcarbonate","type":"exact"},{"name":"AspOSCO2H","type":"exact"},{"name":"O-carboxysulfanyl-4-oxo-L-homoserine","type":"exact"},{"name":"S-(aspart-4-yloxy) thiocarbonate","type":"exact"}],"termid":"MOD:01178"}


id: PR:Q9UT81
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NSFL1 cofactor p47 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.09","secondary_identifiers":["UniProtKB:Q9UT81"],"synonyms":[{"name":"Spom972h-NSFL1C","type":"exact"},{"name":"meiotically up-regulated gene 39 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT81"}


id: PBO:0042398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codanin 1","termid":"PBO:0042398"}


id: PBO:0041469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 21","termid":"PBO:0041469"}


id: GO:1990461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of iron ion. These include transport of iron away from sensitive areas and to compartments or complexes whose purpose is sequestration of iron ion.","definition_xrefs":["GOC:sart","PMID:23064556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"response to iron ion","termid":"GO:0010039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of iron ion","termid":"GO:1990461"}


id: GO:1901753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene A4.","definition_xrefs":["PMID:23242647","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"leukotriene A4 metabolic process","termid":"GO:1901751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"leukotriene A4 biosynthetic process","synonyms":[{"name":"LTA4 biosynthesis","type":"exact"},{"name":"eoxin A4 biosynthesis","type":"exact"},{"name":"leukotriene A4 anabolism","type":"exact"},{"name":"leukotriene A4 biosynthesis","type":"exact"},{"name":"leukotriene A4 formation","type":"exact"},{"name":"leukotriene A4 synthesis","type":"exact"}],"termid":"GO:1901753"}


id: GO:0015058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor-like module containing hormone receptor activity (obsolete GO:0015058)","synonyms":[{"name":"EGF-like module containing hormone receptor activity","type":"exact"},{"name":"Egr1 hormone receptor","type":"exact"},{"name":"epidermal growth factor-like module containing hormone receptor activity","type":"exact"}],"termid":"GO:0015058"}


id: GO:0061289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of the target cell, resulting a change in cell state that contributes to the progression of the kidney over time.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in kidney development (obsolete GO:0061289)","synonyms":[{"name":"Wnt receptor signaling pathway involved in kidney development","type":"exact"},{"name":"Wnt receptor signalling pathway involved in kidney development","type":"exact"},{"name":"Wnt-activated signaling pathway involved in kidney development","type":"exact"}],"termid":"GO:0061289"}


id: GO:1901738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vitamin A metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:18093975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"regulates","term_name":"vitamin A metabolic process","termid":"GO:0006776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of vitamin A metabolic process","synonyms":[{"name":"regulation of vitamin A metabolism","type":"exact"}],"termid":"GO:1901738"}


id: PBO:0042671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 5","termid":"PBO:0042671"}


id: PBO:0065802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1A pseudogene 2","termid":"PBO:0065802"}


id: PBO:0003441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Erg28 protein (predicted)","termid":"PBO:0003441"}


id: PBO:0053741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 967","termid":"PBO:0053741"}


id: PBO:0066727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 24","termid":"PBO:0066727"}


id: PBO:0068173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 480","termid":"PBO:0068173"}


id: RO:0002619
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visited_by","termid":"RO:0002619"}


id: GO:1905837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triterpenoid stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:28078994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to triterpenoid","termid":"GO:1905836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to triterpenoid","termid":"GO:1905837"}


id: PBO:0055232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2659","termid":"PBO:0055232"}


id: PBO:0047775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box C2","termid":"PBO:0047775"}


id: GO:0030974
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"}]},"cv_name":"biological_process","definition":"The process in which thiamine pyrophosphate is transported across a membrane.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transport","termid":"GO:0015697"},{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"thiamine transmembrane transport","termid":"GO:0071934"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"thiamine pyrophosphate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TPP transport","type":"exact"},{"name":"thiamin diphosphate transport","type":"exact"},{"name":"thiamin pyrophosphate transport","type":"exact"},{"name":"thiamine diphosphate transport","type":"exact"},{"name":"thiamine pyrophosphate transport","type":"narrow"}],"termid":"GO:0030974","terms_by_termid":{"GO:1990545":null}}


id: PBO:0047056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 117 member B","termid":"PBO:0047056"}


id: PATO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a polar diameter longer than its equatorial diameter.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Prolate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolate","secondary_identifiers":["Image:http\\://upload.wikimedia.org/wikipedia/commons/8/88/ProlateSpheroid.png"],"synonyms":[{"name":"prolate spheroid","type":"related"}],"termid":"PATO:0001866"}


id: PBO:0082622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of both the Rpd3S and Rpd3L histone deacetylase complexes; involved in transcriptional repression and activation of diverse processes, including mating-type switching and meiosis; involved in the maintenance of chromosomal integrity","termid":"PBO:0082622"}


id: PBO:0034515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_plasma_membrane_at_cell_division_site_during_vegetative_growth","termid":"PBO:0034515"}


id: SO:0001736
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_methylation_site","synonyms":[{"name":"H3K9 methylation site","type":"exact"}],"termid":"SO:0001736"}


id: PBO:0086298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in the ubiquitin-proteasome pathway; interacts with ubiquitinated protein, Cdc48p and the proteasomal regulatory particle; may protect cells from trivalent metalloid induced proteotoxicity; contains a PACE promoter element and is co-regulated with proteasome subunit genes; AN1-type zinc finger protein, with DHHC and ubiquitin-like domains (UBL); ortholog of ZFAND1, a human gene linked to cancer; protein abundance increases under DNA replication stress","termid":"PBO:0086298"}


id: GO:0015137
data:
  {"annotated_genes":["SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of citrate, 2-hydroxy-1,2,3-propanetricarboyxlate, from one side of a membrane to the other.","definition_xrefs":["RHEA:33183","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid transmembrane transporter activity","termid":"GO:0015142"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"citrate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-433104","TC:2.A.29.7.2"],"synonyms":[{"name":"tricarboxylate transport protein","type":"related"}],"termid":"GO:0015137","terms_by_termid":{"GO:0071913":null}}


id: PBO:0082693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the INO80 chromatiin remodeling complex; target of the Mec1p/Tel1p DNA damage signaling pathway; proposed to link chromatin remodeling to replication checkpoint responses","termid":"PBO:0082693"}


id: PBO:0065617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A3","termid":"PBO:0065617"}


id: PR:P28758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superoxide dismutase [Cu-Zn] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10003:SF11","OMA:SCHPO00397","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase [Cu-Zn] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.10c","secondary_identifiers":["UniProtKB:P28758"],"synonyms":[{"name":"Spom972h-SOD1","type":"exact"}],"termid":"PR:P28758"}


id: PBO:0112609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF5102 family, associated with clathrin coated vesicles","termid":"PBO:0112609"}


id: PBO:0049048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 39","termid":"PBO:0049048"}


id: PBO:0109320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein, human endophilin A1-like ortholog","termid":"PBO:0109320"}


id: PBO:0026986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_membrane_cardiolipin_level","termid":"PBO:0026986"}


id: SO:0000532
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one V-gene, one D-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_J_cluster","synonyms":[{"name":"V D J cluster","type":"exact"},{"name":"V-D-J-CLUSTER","type":"exact"}],"termid":"SO:0000532"}


id: PR:G2TRK5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC110.05 gene.","definition_xrefs":["UniProtKB:G2TRK5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C110.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC110.05","synonyms":[{"name":"Spom972h-SPAC110.05","type":"exact"}],"termid":"PR:G2TRK5"}


id: GO:0039519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus effect a change in the frequency, rate or extent of autophagy in the host.","definition_xrefs":["GOC:sp","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by virus of host autophagy","synonyms":[{"name":"regulation by virus of host autophagy","type":"exact"}],"termid":"GO:0039519"}


id: PBO:0064795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1M","termid":"PBO:0064795"}


id: GO:1903323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snoRNA metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016074","GO:0008150"],"is_obsolete":false,"name":"regulation of snoRNA metabolic process","synonyms":[{"name":"regulation of snoRNA metabolism","type":"exact"}],"termid":"GO:1903323"}


id: PBO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses fio1","termid":"PBO:0000365"}


id: PBO:0054864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2278","termid":"PBO:0054864"}


id: GO:0007165
data:
  {"annotated_genes":["SJAG_00875","SJAG_00114","SJAG_01790","SJAG_03893","SJAG_01901","SJAG_02765","SJAG_01632","SJAG_03936","SJAG_00642","SJAG_01805","SJAG_01184","SJAG_00845","SJAG_04118","SJAG_03625","SJAG_03623","SJAG_02072","SJAG_01010","SJAG_06622","SJAG_04426","SJAG_02468","SJAG_01044","SJAG_03048","SJAG_00209","SJAG_00756","SJAG_03405","SJAG_02601","SJAG_00514","SJAG_03695","SJAG_00333","SJAG_04825","SJAG_02592","SJAG_00318","SJAG_00028","SJAG_03879","SJAG_00600","SJAG_04249","SJAG_01718","SJAG_00718","SJAG_02104","SJAG_04537","SJAG_04910","SJAG_04461","SJAG_00082","SJAG_04126","SJAG_04151","SJAG_00293","SJAG_00402","SJAG_02433","SJAG_04103","SJAG_00340","SJAG_01401","SJAG_04332","SJAG_01297","SJAG_02000","SJAG_01386","SJAG_02823","SJAG_02712","SJAG_01429","SJAG_03568","SJAG_01076","SJAG_00486","SJAG_03327","SJAG_02318","SJAG_00963","SJAG_03309","SJAG_02424","SJAG_00661","SJAG_03302","SJAG_05286","SJAG_03248","SJAG_04761","SJAG_04457","SJAG_01768","SJAG_04771","SJAG_06588","SJAG_04262","SJAG_01047","SJAG_05373","SJAG_01254","SJAG_00429","SJAG_03482","SJAG_01188","SJAG_00317","SJAG_02366","SJAG_01210","SJAG_04507","SJAG_03529","SJAG_03907","SJAG_02135","SJAG_01464","SJAG_03987","SJAG_03345","SJAG_04503","SJAG_04655","SJAG_02074","SJAG_00574","SJAG_02736","SJAG_02771","SJAG_02278","SJAG_03089","SJAG_04206","SJAG_02520","SJAG_02392","SJAG_02723","SJAG_00681","SJAG_00167","SJAG_05030","SJAG_03631","SJAG_01858","SJAG_00561","SJAG_03319","SJAG_02481","SJAG_01587","SJAG_02514","SJAG_02838","SJAG_01199","SJAG_00424","SJAG_03488","SJAG_03841","SJAG_01708","SJAG_00688","SJAG_02058","SJAG_02472","SJAG_01181","SJAG_00530","SJAG_03705","SJAG_04671","SJAG_03371","SJAG_03799","SJAG_01082","SJAG_03655","SJAG_01142","SJAG_03453","SJAG_01245","SJAG_00781","SJAG_00704","SJAG_03090","SJAG_03438","SJAG_04999","SJAG_03931","SJAG_02231","SJAG_02022","SJAG_05290","SJAG_04464","SJAG_00975","SJAG_00824","SJAG_04943","SJAG_03748","SJAG_00321","SJAG_04018","SJAG_03185","SJAG_00331","SJAG_03709","SJAG_04987","SJAG_03272","SJAG_01376","SJAG_03508","SJAG_04597","SJAG_04668","SJAG_03067","SJAG_03720","SJAG_04460","SJAG_00526","SJAG_01699","SJAG_01787","SJAG_04280","SJAG_00807","SJAG_00143","SJAG_05184","SJAG_05304","SJAG_01978","SJAG_01605","SJAG_00214","SJAG_01774","SJAG_02860","SJAG_03611","SJAG_00790","SJAG_00296","SJAG_05000","SJAG_03384","SJAG_03073","SJAG_06270","SJAG_04777","SJAG_04469","SJAG_00071","SJAG_00993","SJAG_06592","SJAG_04140","SJAG_06621","SJAG_02684","SJAG_03340","SJAG_01150","SJAG_02605","SJAG_03026","SJAG_03637","SJAG_00236","SJAG_01509","SJAG_01825","SJAG_02854","SJAG_04873","SJAG_00256","SJAG_00327","SJAG_00078","SJAG_02233","SJAG_00142","SJAG_02258","SJAG_02945","SJAG_04486","SJAG_02169","SJAG_00472","SJAG_01345","SJAG_02760","SJAG_04666","SJAG_04884","SJAG_04522","SJAG_04776","SJAG_01330","SJAG_00027","SJAG_01187","SJAG_03927","SJAG_01032","SJAG_02183","SJAG_03081","SJAG_03342","SJAG_03501","SJAG_04394","SJAG_03310","SJAG_01703","SJAG_01516","SJAG_02921","SJAG_03793","SJAG_01084","SJAG_01855","SJAG_03602","SJAG_01983","SJAG_02858","SJAG_05346","SJAG_00329","SJAG_01885","SJAG_03903","SJAG_03681","SJAG_03126","SJAG_04235","SJAG_03928","SJAG_01307","SJAG_02444","SJAG_02379","SJAG_00229","SJAG_04765","SJAG_01679","SJAG_00117","SJAG_01311","SJAG_04287","SJAG_03160","SJAG_04871","SJAG_02098","SJAG_02336","SJAG_00364","SJAG_03898","SJAG_01114","SJAG_04551","SJAG_04455","SJAG_04496","SJAG_03361","SJAG_03802","SJAG_00266","SJAG_02785","SJAG_02026","SJAG_03376","SJAG_04573","SJAG_01657","SJAG_02498","SJAG_00883","SJAG_02027","SJAG_04699","SJAG_02266","SJAG_03739","SJAG_01680","SJAG_03592","SJAG_03828","SJAG_00991","SJAG_03591","SJAG_04462","SJAG_04283","SJAG_02342","SJAG_01320","SJAG_02703","SJAG_04920","SJAG_00169","SJAG_00356","SJAG_02451","SJAG_04329","SJAG_01373","SJAG_01754","SJAG_04435","SJAG_01519","SJAG_00678","SJAG_00623","SJAG_01020","SJAG_05330","SJAG_03678","SJAG_04312","SJAG_01253","SJAG_04384","SJAG_04383","SJAG_00226","SJAG_00289","SJAG_01000","SJAG_01146","SJAG_01205","SJAG_01873","SJAG_02563","SJAG_04200","SJAG_02232","SJAG_04026","SJAG_03753","SJAG_00640","SJAG_03557","SJAG_00990","SJAG_02311","SJAG_03263","SJAG_02576","SJAG_00551","SJAG_02426","SJAG_00457","SJAG_03353","SJAG_01677","SJAG_03072","SJAG_03355","SJAG_02486","SJAG_02923","SJAG_03486","SJAG_01585","SJAG_02429","SJAG_04259","SJAG_04471","SJAG_00610","SJAG_01837","SJAG_05335","SJAG_03942","SJAG_04468","SJAG_03338","SJAG_02682","SJAG_01138","SJAG_02013","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64646,65087,69943,76059,83893,84083,85248,85262,85768,85960,86990,87211,87767,88162,88735,89891,90986,91468,92392,92453,93698,94614,99046,100384,101244,101938,102959,104546,105562,106226,106253,106332,109402,111511,114198],"is_not":false,"summary":null,"term":"GO:0007165"},{"annotations":[96527,97939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007189"},{"annotations":[111703,112744,102615,102025,97940,102970,105154,105659,90273],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0010619"},{"annotations":[65653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[94185,114754,88424,109521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097720"},{"annotations":[94186,88426,84762,93734,113568,87240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019722"},{"annotations":[114408,112321,112663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061762"},{"annotations":[107127,88287,98243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000196"},{"annotations":[101656,104584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007166"},{"annotations":[112076,109948,86754,104391,95676,110436,103365,108116,100015],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[105454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000077"},{"annotations":[105705,109976,113569,85698,90541,112965,94795,110377,97328,110243,89585,88979,113412,103308,112206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030968"},{"annotations":[113061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006984"},{"annotations":[93116,103267,84176,106156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007186"},{"annotations":[95528,105814,91273,99440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140469"},{"annotations":[111074,108000,86958,91719,71218,97474,101298,110935,83555,77634,107072,84335,114096,84504,113114,89243,89873,93010,85956,92385,104586,108868,76054,86310,76233,76401,88111,102026,113648,89838,112502,83886,72546,87512,85899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035556"},{"annotations":[85549,89125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036498"},{"annotations":[102398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007254"},{"annotations":[96059,93275,57285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000165"},{"annotations":[102440,110661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[88551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[112238,87453,102734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[85092,110426,112239,102735,76789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[112856,102441,97889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[84876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031930"},{"annotations":[95083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007093"},{"annotations":[86028,112181,97525,90453,96625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[112182,95275,105455,78754,110427,112414,113900,89603,98460,89984,107348,87815,110632,102736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[99433,105456,112240,96626,108191,95444,95276,85152,113290,90008,89985,103973,102737,112990,113459,87454,88552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[112078,98461,97711,105027,84977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[87331,105815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[94512,91907,90586,112183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[86242,87816,87455,107886,84581,85153,95445,113901,102738,113205,96627,89987,97142,110428,105457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[102739,85200,84582,88553,107887,90587,112241,108193,112242,85154,95277,96947,97613,86473,92070,87456,113291,95446,98462,103804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"},{"annotations":[97890,102442,110664,95522,106052,112859,111728,86756,109952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[112563],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0106072"},{"annotations":[88777,88112,112564,96529,104105],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"},{"annotations":[112308,97085],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0106057"},{"annotations":[114497,91908,95529,99925,103176,103748],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903138"},{"annotations":[85468,98953,98244],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902660"},{"annotations":[103268,84243],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0043409"},{"annotations":[90245],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[92030,87685,95531,113266,114498,91083],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903753"},{"annotations":[103269],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0180040"},{"annotations":[89357],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[107516],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0046580"},{"annotations":[101467],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0035024"},{"annotations":[112079,95677,89495,103677,95757,97366,88872,91698,86758,103367,103228,101157,106316,87754,88958],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[102017,107869,87262],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000639"},{"annotations":[87285],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0032007"},{"annotations":[103282,89363,99124,109324,113230,112309,110146,114411,94959,97541,84056,105406,112667,90218,95660,92159,103534,105818,112415,107106,110742,101251],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904262"},{"annotations":[112456],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903940"},{"annotations":[96992,90415,97848,106487,102399,83581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038066"},{"annotations":[85266,92442,89358,102400,88210,93117],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[73175,84177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000750"},{"annotations":[93669,91987,107281,89253,89418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048015"},{"annotations":[114463,68472,65549,65772,107980,91307,87181,108638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000160"},{"annotations":[98247,107128],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0050850"},{"annotations":[85469,86800,98954,88442],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903139"},{"annotations":[109953],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[112863],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[91308,105084,108639,113556,107981,114464,105079,105082,105081,105083,105080,105085],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900745"},{"annotations":[84179,86877,110788,99825,111759],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0062038"},{"annotations":[87185],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0046579"},{"annotations":[106670,83575,86035,89850,98488],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[89727,89726,89728,109602,109604,113173,109603],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000640"},{"annotations":[101252,102691],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032008"},{"annotations":[106686,90365,84057,85452,92160,94084,84349,105407,109023,114549,103283],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904263"},{"annotations":[93820,103126,87218],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904515"},{"annotations":[97945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010737"},{"annotations":[114970,96265,101482,108632,87162,109216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062200"},{"annotations":[101179,107162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031291"},{"annotations":[88379,79151],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043408"},{"annotations":[97425],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[90246],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"},{"annotations":[91084],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1900744"},{"annotations":[69156,112683],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032483"},{"annotations":[100623,109530,85995],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031029"},{"annotations":[101253,113988,90101,88924,103986,111653],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903432"},{"annotations":[95622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007266"},{"annotations":[102508,85274,103275,111645,83577,103229,97035,90462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031028"},{"annotations":[107518,102502,111760,86881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032005"},{"annotations":[101301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090520"},{"annotations":[85298,112578,89928,88664,105995,98210,100095,101963,85020,114415,108723,108977,114623,113175,93899,85683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032933"},{"annotations":[100085,100430,62132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031929"},{"annotations":[88114,102780,89246,102805,109191,113316,94639,111093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038202"},{"annotations":[102806,97851,104715,114564,98834,95466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038203"}]},"cv_name":"biological_process","definition":"The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.","definition_xrefs":["GOC:go_curators","GOC:mtg_signaling_feb11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"part_of","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"part_of","term_name":"signaling","termid":"GO:0023052"},{"relation_name":"part_of","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":346,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00028":null,"SJAG_00071":null,"SJAG_00078":null,"SJAG_00082":null,"SJAG_00114":null,"SJAG_00117":null,"SJAG_00142":null,"SJAG_00143":null,"SJAG_00167":null,"SJAG_00169":null,"SJAG_00209":null,"SJAG_00214":null,"SJAG_00226":null,"SJAG_00229":null,"SJAG_00236":null,"SJAG_00256":null,"SJAG_00266":null,"SJAG_00289":null,"SJAG_00293":null,"SJAG_00296":null,"SJAG_00317":null,"SJAG_00318":null,"SJAG_00321":null,"SJAG_00327":null,"SJAG_00329":null,"SJAG_00331":null,"SJAG_00333":null,"SJAG_00340":null,"SJAG_00356":null,"SJAG_00364":null,"SJAG_00402":null,"SJAG_00424":null,"SJAG_00429":null,"SJAG_00457":null,"SJAG_00472":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00530":null,"SJAG_00551":null,"SJAG_00561":null,"SJAG_00574":null,"SJAG_00600":null,"SJAG_00610":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_00642":null,"SJAG_00661":null,"SJAG_00678":null,"SJAG_00681":null,"SJAG_00688":null,"SJAG_00704":null,"SJAG_00718":null,"SJAG_00756":null,"SJAG_00781":null,"SJAG_00790":null,"SJAG_00807":null,"SJAG_00824":null,"SJAG_00845":null,"SJAG_00875":null,"SJAG_00883":null,"SJAG_00963":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_00993":null,"SJAG_01000":null,"SJAG_01010":null,"SJAG_01020":null,"SJAG_01032":null,"SJAG_01044":null,"SJAG_01047":null,"SJAG_01076":null,"SJAG_01082":null,"SJAG_01084":null,"SJAG_01114":null,"SJAG_01138":null,"SJAG_01142":null,"SJAG_01146":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01188":null,"SJAG_01199":null,"SJAG_01205":null,"SJAG_01210":null,"SJAG_01245":null,"SJAG_01253":null,"SJAG_01254":null,"SJAG_01297":null,"SJAG_01307":null,"SJAG_01311":null,"SJAG_01320":null,"SJAG_01330":null,"SJAG_01345":null,"SJAG_01373":null,"SJAG_01376":null,"SJAG_01386":null,"SJAG_01401":null,"SJAG_01429":null,"SJAG_01464":null,"SJAG_01509":null,"SJAG_01516":null,"SJAG_01519":null,"SJAG_01585":null,"SJAG_01587":null,"SJAG_01605":null,"SJAG_01632":null,"SJAG_01657":null,"SJAG_01677":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01699":null,"SJAG_01703":null,"SJAG_01708":null,"SJAG_01718":null,"SJAG_01754":null,"SJAG_01768":null,"SJAG_01774":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_01825":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01858":null,"SJAG_01873":null,"SJAG_01885":null,"SJAG_01901":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02022":null,"SJAG_02026":null,"SJAG_02027":null,"SJAG_02058":null,"SJAG_02072":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02104":null,"SJAG_02135":null,"SJAG_02169":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02232":null,"SJAG_02233":null,"SJAG_02258":null,"SJAG_02266":null,"SJAG_02278":null,"SJAG_02311":null,"SJAG_02318":null,"SJAG_02336":null,"SJAG_02342":null,"SJAG_02366":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02424":null,"SJAG_02426":null,"SJAG_02429":null,"SJAG_02433":null,"SJAG_02444":null,"SJAG_02451":null,"SJAG_02468":null,"SJAG_02472":null,"SJAG_02481":null,"SJAG_02486":null,"SJAG_02498":null,"SJAG_02514":null,"SJAG_02520":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02601":null,"SJAG_02605":null,"SJAG_02682":null,"SJAG_02684":null,"SJAG_02703":null,"SJAG_02712":null,"SJAG_02723":null,"SJAG_02736":null,"SJAG_02760":null,"SJAG_02765":null,"SJAG_02771":null,"SJAG_02785":null,"SJAG_02823":null,"SJAG_02838":null,"SJAG_02854":null,"SJAG_02858":null,"SJAG_02860":null,"SJAG_02878":null,"SJAG_02921":null,"SJAG_02923":null,"SJAG_02945":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03072":null,"SJAG_03073":null,"SJAG_03081":null,"SJAG_03089":null,"SJAG_03090":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03185":null,"SJAG_03248":null,"SJAG_03263":null,"SJAG_03272":null,"SJAG_03302":null,"SJAG_03309":null,"SJAG_03310":null,"SJAG_03319":null,"SJAG_03327":null,"SJAG_03338":null,"SJAG_03340":null,"SJAG_03342":null,"SJAG_03345":null,"SJAG_03353":null,"SJAG_03355":null,"SJAG_03361":null,"SJAG_03371":null,"SJAG_03376":null,"SJAG_03384":null,"SJAG_03405":null,"SJAG_03438":null,"SJAG_03453":null,"SJAG_03482":null,"SJAG_03486":null,"SJAG_03488":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03529":null,"SJAG_03557":null,"SJAG_03568":null,"SJAG_03591":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03611":null,"SJAG_03623":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03637":null,"SJAG_03655":null,"SJAG_03678":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03705":null,"SJAG_03709":null,"SJAG_03720":null,"SJAG_03739":null,"SJAG_03748":null,"SJAG_03753":null,"SJAG_03793":null,"SJAG_03799":null,"SJAG_03802":null,"SJAG_03828":null,"SJAG_03841":null,"SJAG_03879":null,"SJAG_03893":null,"SJAG_03898":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03927":null,"SJAG_03928":null,"SJAG_03931":null,"SJAG_03936":null,"SJAG_03942":null,"SJAG_03987":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04151":null,"SJAG_04200":null,"SJAG_04206":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04259":null,"SJAG_04262":null,"SJAG_04280":null,"SJAG_04283":null,"SJAG_04287":null,"SJAG_04312":null,"SJAG_04329":null,"SJAG_04332":null,"SJAG_04383":null,"SJAG_04384":null,"SJAG_04394":null,"SJAG_04426":null,"SJAG_04435":null,"SJAG_04455":null,"SJAG_04457":null,"SJAG_04460":null,"SJAG_04461":null,"SJAG_04462":null,"SJAG_04464":null,"SJAG_04468":null,"SJAG_04469":null,"SJAG_04471":null,"SJAG_04486":null,"SJAG_04496":null,"SJAG_04503":null,"SJAG_04507":null,"SJAG_04522":null,"SJAG_04537":null,"SJAG_04551":null,"SJAG_04573":null,"SJAG_04597":null,"SJAG_04655":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04671":null,"SJAG_04699":null,"SJAG_04761":null,"SJAG_04765":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04777":null,"SJAG_04825":null,"SJAG_04871":null,"SJAG_04873":null,"SJAG_04884":null,"SJAG_04910":null,"SJAG_04920":null,"SJAG_04943":null,"SJAG_04987":null,"SJAG_04999":null,"SJAG_05000":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_05286":null,"SJAG_05290":null,"SJAG_05304":null,"SJAG_05330":null,"SJAG_05335":null,"SJAG_05346":null,"SJAG_05373":null,"SJAG_06270":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"signal transduction","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0023015","GO:0023014","GO:0023033","Wikipedia:Signal_transduction","GO:0023016","GO:0023045"],"synonyms":[{"name":"signaling cascade","type":"narrow"},{"name":"signaling pathway","type":"related"},{"name":"signalling cascade","type":"narrow"},{"name":"signalling pathway","type":"related"}],"termid":"GO:0007165","terms_by_termid":{"GO:0000077":null,"GO:0000160":null,"GO:0000165":null,"GO:0000196":null,"GO:0000750":null,"GO:0006984":null,"GO:0007093":null,"GO:0007094":null,"GO:0007095":null,"GO:0007165":null,"GO:0007166":null,"GO:0007186":null,"GO:0007189":null,"GO:0007254":null,"GO:0007266":null,"GO:0009785":null,"GO:0010619":null,"GO:0010737":null,"GO:0019722":null,"GO:0030968":null,"GO:0031028":null,"GO:0031029":null,"GO:0031030":null,"GO:0031031":null,"GO:0031291":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031573":null,"GO:0031929":null,"GO:0031930":null,"GO:0032005":null,"GO:0032007":null,"GO:0032008":null,"GO:0032483":null,"GO:0032933":null,"GO:0033314":null,"GO:0033315":null,"GO:0033316":null,"GO:0035024":null,"GO:0035556":null,"GO:0036498":null,"GO:0038066":null,"GO:0038202":null,"GO:0038203":null,"GO:0043408":null,"GO:0043409":null,"GO:0044773":null,"GO:0044778":null,"GO:0044878":null,"GO:0046579":null,"GO:0046580":null,"GO:0048015":null,"GO:0050850":null,"GO:0051598":null,"GO:0061762":null,"GO:0062038":null,"GO:0062200":null,"GO:0071507":null,"GO:0090029":null,"GO:0090266":null,"GO:0090267":null,"GO:0090520":null,"GO:0097720":null,"GO:0106057":null,"GO:0106072":null,"GO:0110034":null,"GO:0140469":null,"GO:0140499":null,"GO:0180040":null,"GO:1900744":null,"GO:1900745":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903139":null,"GO:1903432":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:1904263":null,"GO:1904515":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:2000639":null,"GO:2000640":null}}


id: PBO:0044702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 Y-linked","termid":"PBO:0044702"}


id: PR:O74429
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.06c","secondary_identifiers":["UniProtKB:O74429"],"synonyms":[{"name":"InsP6 and PP-IP5 kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC1672.06c","type":"related"},{"name":"Spom972h-PPIP5K2","type":"exact"},{"name":"cortical actin cytoskeleton protein asp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vip1","type":"related"}],"termid":"PR:O74429"}


id: PBO:0085285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal protein; identification as a delta(3,5)-delta(2,4)-dienoyl-CoA isomerase involved in fatty acid metabolism is disputed; DCI1 has a paralog, ECI1, that arose from the whole genome duplication","termid":"PBO:0085285"}


id: PBO:0052282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM7A divergent transcript","termid":"PBO:0052282"}


id: GO:0140744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of a lncRNA.","definition_xrefs":["PMID:33913806","PMID:33767452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of lncRNA transcription","termid":"GO:0140743"},{"relation_name":"negatively_regulates","term_name":"lncRNA transcription","termid":"GO:0140742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lncRNA transcription","termid":"GO:0140744"}


id: PBO:0057263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 488","termid":"PBO:0057263"}


id: PBO:0074840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 33","termid":"PBO:0074840"}


id: PBO:0078778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 3-2","termid":"PBO:0078778"}


id: PBO:0003992
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.11","termid":"PBO:0003992"}


id: PBO:0088783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Atf31","termid":"PBO:0088783"}


id: GO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of germinal center formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"germinal center formation","termid":"GO:0002467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of germinal center formation","termid":"GO:0002634"}


id: FYPO:0004833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased during anaphase B. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["GO:1990023","GO:1902967","PomBase:mah","PMID:16824200","GO:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle midzone during anaphase","termid":"FYPO:0004831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone during anaphase B","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone during anaphase B","type":"exact"},{"name":"decreased protein localization to spindle midzone during anaphase B during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle midzone during mitotic anaphase B","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone during anaphase B","type":"exact"}],"termid":"FYPO:0004833"}


id: PBO:0046443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPN2 intronic transcript 1","termid":"PBO:0046443"}


id: GO:0019391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete glucuronoside catabolic process (obsolete GO:0019391)","synonyms":[{"name":"glucuronide catabolic process","type":"exact"},{"name":"glucuronide catabolism","type":"exact"},{"name":"glucuronoside breakdown","type":"exact"},{"name":"glucuronoside catabolism","type":"exact"},{"name":"glucuronoside degradation","type":"exact"}],"termid":"GO:0019391"}


id: PBO:0003734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51 (predicted)","termid":"PBO:0003734"}


id: PBO:0053357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 261","termid":"PBO:0053357"}


id: FYPO:0008171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nuclear pore complexes are more clustered together than normal.","definition_xrefs":["PMID:35354597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased nuclear pore complex clustering","termid":"FYPO:0008171"}


id: PBO:0067318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 404, pseudogene","termid":"PBO:0067318"}


id: PBO:0069321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 579, pseudogene","termid":"PBO:0069321"}


id: FYPO:0007980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain interphase microtubule bundles with microtubule overlaps longer than normal.","definition_xrefs":["PMID:15837798","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"Increased microtubule overlap length in bundles during mitotic interphase:","termid":"FYPO:0007980"}


id: PR:P78825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenosine kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.14","secondary_identifiers":["UniProtKB:P78825"],"synonyms":[{"name":"Spom972h-ADK","type":"exact"}],"termid":"PR:P78825"}


id: GO:0015424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + amino acid(out/in) = ADP + phosphate + amino acid(in/out).","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type amino acid transporter activity","secondary_identifiers":["GO:0032518","GO:0032520"],"synonyms":[{"name":"ATP-dependent amino acid transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled amino acid transmembrane transporter activity","type":"related"},{"name":"amino acid ABC transporter","type":"narrow"},{"name":"amino acid-exporting ATPase activity","type":"related"},{"name":"amino acid-importing ATPase activity","type":"related"},{"name":"amino acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0015424"}


id: GO:0035383
data:
  {"annotated_genes":["SJAG_04007","SJAG_01474","SJAG_01187","SJAG_03290","SJAG_03813","SJAG_01402","SJAG_03731","SJAG_04865","SJAG_03471","SJAG_03064","SJAG_00866","SJAG_00982","SJAG_02769","SJAG_04895","SJAG_01524","SJAG_02006","SJAG_02158","SJAG_04499","SJAG_03715","SJAG_00902","SJAG_02741","SJAG_01989","SJAG_00947","SJAG_03909","SJAG_01139","SJAG_02380","SJAG_03349","SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89289,94461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[83463,104730,91052,110406,114640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[110512,87463,94115,111936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006084"},{"annotations":[104849,92887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006637"},{"annotations":[84733,92659,90489,111071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[103609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[101722,109586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"},{"annotations":[94440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[107524,111652],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[95116],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[111138,85947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a thioester, a compound of general formula RC(=O)SR' in which the linking oxygen in an ester is replaced by a sulfur atom. They are the product of esterification between a carboxylic acid and a thiol.","definition_xrefs":["GOC:bf","Wikipedia:Thioester"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01474":null,"SJAG_01524":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02380":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03313":null,"SJAG_03349":null,"SJAG_03471":null,"SJAG_03715":null,"SJAG_03731":null,"SJAG_03813":null,"SJAG_03909":null,"SJAG_04007":null,"SJAG_04499":null,"SJAG_04865":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"thioester metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thioester metabolism","type":"exact"}],"termid":"GO:0035383","terms_by_termid":{"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0006104":null,"GO:0006637":null,"GO:0010510":null,"GO:0019287":null,"GO:0019427":null,"GO:0035336":null,"GO:0035338":null,"GO:1990181":null,"GO:2001211":null,"GO:2001295":null}}


id: GO:0031637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neurotrophic factor induces neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.","definition_xrefs":["PMID:8703078","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuronal synaptic plasticity","termid":"GO:0048168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of neuronal synaptic plasticity in response to neurotrophin","synonyms":[{"name":"neurotrophin-induced neuronal synaptic plasticity","type":"exact"}],"termid":"GO:0031637"}


id: PBO:0035979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035979"}


id: PBO:0004619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"para-aminobenzoate synthase (predicted)","termid":"PBO:0004619"}


id: PBO:0064002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 36","termid":"PBO:0064002"}


id: PBO:0072977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2B member 1, pseudogene","termid":"PBO:0072977"}


id: GO:0019577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aldaric acid metabolic process","synonyms":[{"name":"aldaric acid metabolism","type":"exact"}],"termid":"GO:0019577"}


id: PBO:0038891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADD3 antisense RNA 1","termid":"PBO:0038891"}


id: PBO:0047769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box A1","termid":"PBO:0047769"}


id: PBO:0109643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 37 (pseudogene)","termid":"PBO:0109643"}


id: PBO:0027648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_spheroid_vegetative_cell","termid":"PBO:0027648"}


id: GO:0052845
data:
  {"annotated_genes":["SJAG_04870","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84759,101321],"is_not":false,"summary":null,"term":"GO:0052845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate + H2O = 1D-myo-inositol 1,2,3,4,5,6-hexakisphosphate + phosphate + H+.","definition_xrefs":["PMID:11502751","PMID:10827188","RHEA:22384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol diphosphate pentakisphosphate diphosphatase activity","termid":"GO:0052842"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-10964","KEGG_REACTION:R05779"],"termid":"GO:0052845","terms_by_termid":{"GO:0052845":null}}


id: FYPO:0008125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A abnormal nuclear envelope organization phenotype in which SPB fenestra in the nuclear envelope are present for longer than normal.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of nuclear envelope SPB fenestra","synonyms":[{"name":"persistent nuclear envelope fenestra","type":"exact"}],"termid":"FYPO:0008125"}


id: PR:P87175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-(apurinic or apyrimidinic site) lyase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02802","PANTHER:PTHR22748:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-(apurinic or apyrimidinic site) lyase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.10","secondary_identifiers":["UniProtKB:P87175"],"synonyms":[{"name":"AP endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-APEX2","type":"exact"},{"name":"apurinic-apyrimidinic endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87175"}


id: PBO:0088001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twinfilin; highly conserved actin monomer-sequestering protein involved in regulation of the cortical actin cytoskeleton; coordinates actin filament severing and monomer sequestering at sites of rapid actin turnover; composed of two cofilin-like regions, stimulates actin depolymerization as does the mouse homolog, mTwf1","termid":"PBO:0088001"}


id: PBO:0003855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial manganese ion transporter (predicted)","termid":"PBO:0003855"}


id: PR:Q8NKC1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.04c gene.","definition_xrefs":["UniProtKB:Q8NKC1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol O-methyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.04c","synonyms":[{"name":"Spom972h-SPBPB21E7.04c","type":"exact"}],"termid":"PR:Q8NKC1"}


id: SO:0000560
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one D-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_J_cluster","synonyms":[{"name":"D J cluster","type":"exact"},{"name":"D-J-CLUSTER","type":"exact"}],"termid":"SO:0000560"}


id: GO:0050911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of smell in which an olfactory chemical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception","termid":"GO:0050907"},{"relation_name":"part_of","term_name":"sensory perception of smell","termid":"GO:0007608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of smell","synonyms":[{"name":"perception of smell, detection of chemical stimulus","type":"exact"},{"name":"perception of smell, sensory detection of chemical stimulus","type":"exact"},{"name":"perception of smell, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of smell","type":"exact"},{"name":"sensory detection of scent","type":"exact"},{"name":"sensory detection of smell","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of smell","type":"exact"},{"name":"sensory transduction of scent","type":"exact"},{"name":"sensory transduction of smell","type":"exact"}],"termid":"GO:0050911"}


id: GO:2001222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuron migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron migration","synonyms":[{"name":"regulation of neuron chemotaxis","type":"exact"},{"name":"regulation of neuron guidance","type":"related"},{"name":"regulation of neuronal migration","type":"exact"}],"termid":"GO:2001222"}


id: PBO:0039319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 5-lipoxygenase","termid":"PBO:0039319"}


id: PBO:0059743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 17","termid":"PBO:0059743"}


id: GO:0050137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O2 + H+ + NADPH = 2 H2O + NADP+.","definition_xrefs":["RHEA:15173","EC:1.11.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NADPH peroxidase activity","secondary_identifiers":["MetaCyc:NADPH-PEROXIDASE-RXN","KEGG_REACTION:R00113"],"synonyms":[{"name":"NADP peroxidase activity","type":"related"},{"name":"NADPH:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"TPN peroxidase activity","type":"related"},{"name":"TPNH peroxidase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide phosphate peroxidase activity","type":"related"},{"name":"triphosphopyridine nucleotide peroxidase activity","type":"related"}],"termid":"GO:0050137"}


id: GO:0060900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a camera-type eye from unspecified neurectoderm. This process begins with the differentiation of cells that form the optic field and ends when the optic cup has attained its shape.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"embryonic camera-type eye morphogenesis","termid":"GO:0048596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic camera-type eye formation","termid":"GO:0060900"}


id: PBO:0012265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transporter Aat1","termid":"PBO:0012265"}


id: GO:0050041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate = acetaldehyde + formate.","definition_xrefs":["RHEA:17909","EC:4.1.2.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactate aldolase activity","secondary_identifiers":["MetaCyc:LACTATE-ALDOLASE-RXN","KEGG_REACTION:R00753"],"synonyms":[{"name":"(S)-lactate acetaldehyde-lyase (formate-forming)","type":"related"},{"name":"(S)-lactate acetaldehyde-lyase activity","type":"related"},{"name":"lactate synthase activity","type":"related"}],"termid":"GO:0050041"}


id: GO:0008364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a chitin-based pupal cuticle. At the end of the prepupal period the insect is covered by the pupal cuticle which continues to be elaborated into the pupal period. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development involved in chitin-based cuticle molting cycle","termid":"GO:0042337"},{"relation_name":"part_of","term_name":"pupal development","termid":"GO:0035209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pupal chitin-based cuticle development","synonyms":[{"name":"pupal cuticle anabolism","type":"broad"},{"name":"pupal cuticle formation","type":"broad"},{"name":"pupal cuticle synthesis","type":"broad"}],"termid":"GO:0008364"}


id: GO:0086094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adrenergic receptor signaling pathway that contributes to an increase in frequency or rate of cardiac muscle contraction through phosphorylation and enhancement of the ryanodine receptor, a calcium-activated calcium-release channel found in the membrane of the sarcoplasmic reticulum. An adrenergic receptor-activated adenylate cyclase generates cAMP. cAMP then activates the cAMP-dependent protein kinase A (PKA), which phosphorylates the ryanodine receptor (RyR). PKA-phosphorylation of RyR enhances channel activity by sensitizing the channel to cytosolic calcium. Cytosolic calcium stimulates contractile proteins to promote muscle contraction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:bf","GOC:BHF","PMID:21099118"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ryanodine-sensitive calcium-release channel activity by adrenergic receptor signaling pathway involved in positive regulation of cardiac muscle contraction (obsolete GO:0086094)","synonyms":[{"name":"adrenergic receptor signaling pathway involved in positive regulation of cardiac muscle contraction via ryanodine receptor phosphorylation","type":"narrow"}],"termid":"GO:0086094"}


id: PBO:0074782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 4A","termid":"PBO:0074782"}


id: PBO:0004021
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mads BoX protein","termid":"PBO:0004021"}


id: FYPO:0002091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during meiosis I or meiosis II, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"lagging chromosomes","termid":"FYPO:0002090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"lagging meiotic chromosomes","synonyms":[{"name":"chromosome segregation defects, lagging meiotic chromosomes","type":"exact"},{"name":"lagging chromosomes during meiosis","type":"exact"},{"name":"meiotic chromosome segregation defects, lagging chromosomes","type":"exact"}],"termid":"FYPO:0002091"}


id: PBO:0026972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0026972"}


id: GO:0004069
data:
  {"annotated_genes":["SJAG_03306","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83881,107974],"is_not":false,"summary":null,"term":"GO:0004069"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate.","definition_xrefs":["EC:2.6.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_03306":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"L-aspartate:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00355","Reactome:R-HSA-70596","Reactome:R-HSA-70613","MetaCyc:ASPARTATE-DEG1-PWY","RHEA:21824","MetaCyc:ASPARTATESYN-PWY","Reactome:R-HSA-70592","MetaCyc:ASPAMINOTRANS-RXN","Reactome:R-HSA-70581"],"synonyms":[{"name":"2-oxoglutarate-glutamate aminotransferase activity","type":"related"},{"name":"AAT","type":"related"},{"name":"AspT","type":"related"},{"name":"GOT (enzyme)","type":"related"},{"name":"L-aspartate transaminase activity","type":"broad"},{"name":"L-aspartate-2-ketoglutarate aminotransferase activity","type":"related"},{"name":"L-aspartate-2-oxoglutarate aminotransferase activity","type":"related"},{"name":"L-aspartate-2-oxoglutarate-transaminase activity","type":"related"},{"name":"L-aspartate-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"L-aspartic aminotransferase activity","type":"broad"},{"name":"aspartate alpha-ketoglutarate transaminase activity","type":"related"},{"name":"aspartate aminotransferase activity","type":"broad"},{"name":"aspartate transaminase activity","type":"broad"},{"name":"aspartate-2-oxoglutarate transaminase activity","type":"related"},{"name":"aspartate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"aspartic acid aminotransferase activity","type":"broad"},{"name":"aspartic aminotransferase activity","type":"broad"},{"name":"aspartyl aminotransferase activity","type":"broad"},{"name":"glutamate oxaloacetate transaminase activity","type":"related"},{"name":"glutamate-oxalacetate aminotransferase activity","type":"related"},{"name":"glutamate-oxalate transaminase activity","type":"related"},{"name":"glutamic oxalic transaminase activity","type":"related"},{"name":"glutamic--aspartic transaminase activity","type":"related"},{"name":"glutamic--oxaloacetic transaminase activity","type":"related"},{"name":"glutamic-aspartic aminotransferase activity","type":"related"},{"name":"glutamic-oxalacetic transaminase activity","type":"related"},{"name":"oxaloacetate transferase activity","type":"related"},{"name":"oxaloacetate-aspartate aminotransferase activity","type":"related"},{"name":"transaminase A activity","type":"related"}],"termid":"GO:0004069","terms_by_termid":{"GO:0004069":null}}


id: PBO:0060179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 3","termid":"PBO:0060179"}


id: PR:O59852
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- inv1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invertase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.11","synonyms":[{"name":"Saccharase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-inv1","type":"exact"},{"name":"beta-fructofuranosidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59852"}


id: FYPO:0006427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during the first meiotic nuclear division does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"premature septum assembly","termid":"FYPO:0003250"},{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"},{"relation_name":"is_a","term_name":"premature septum assembly","termid":"FYPO:0003250"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"abolished attachment of spindle microtubules to kinetochore during meiosis I","synonyms":[{"name":"abolished attachment of spindle microtubules to kinetochore during first meiotic nuclear division","type":"exact"},{"name":"abolished attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"abolished attachment of spindle microtubules to meiosis I kinetochore","type":"exact"},{"name":"abolished kinetochore mono-orientation at meiosis I","type":"exact"},{"name":"abolished sister kinetochore mono-orientation","type":"exact"},{"name":"attachment of spindle microtubules to kinetochore abolished during meiosis I","type":"exact"},{"name":"attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation abolished","type":"exact"}],"termid":"FYPO:0006427"}


id: FYPO:0001417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms an equatorial microtubule organizing center in an abnormal location. The normal location is at the center of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mislocalized eMTOC","synonyms":[{"name":"mislocalised eMTOC","type":"exact"},{"name":"mislocalized eMTOC during mitotic cell cycle","type":"related"},{"name":"mislocalized eMTOC during vegetative growth","type":"exact"},{"name":"mislocalized equatorial microtubule organizing center","type":"exact"}],"termid":"FYPO:0001417"}


id: GO:0019728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of allysine to 2-aminoadipic acid.","definition_xrefs":["RESID:AA0122"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-allysine oxidation to 2-aminoadipic acid (obsolete GO:0019728)","termid":"GO:0019728"}


id: PBO:0031122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_proline_nitrogen_source","termid":"PBO:0031122"}


id: PBO:0030691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0030691"}


id: PBO:0069783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1068, pseudogene","termid":"PBO:0069783"}


id: GO:0071895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell of neural crest origin acquires the specialized features of an odontoblast, a cell on the outer surface of the dental pulp whose biological function is the creation of dentin.","definition_xrefs":["PMID:20425127","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"odontoblast differentiation","termid":"GO:0071895"}


id: PBO:0028799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_arrest","termid":"PBO:0028799"}


id: GO:0098929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of spine apparatus membrane (obsolete GO:0098929)","termid":"GO:0098929"}


id: PBO:0081891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 841","termid":"PBO:0081891"}


id: GO:0052488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity (obsolete GO:0052488)","synonyms":[{"name":"negative regulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity","type":"exact"},{"name":"suppression of MAMP induced symbiont innate immunity","type":"exact"},{"name":"suppression of MAMP-induced symbiont innate immunity","type":"exact"},{"name":"suppression of PAMP induced symbiont innate immunity","type":"exact"},{"name":"suppression of PAMP-induced symbiont innate immunity","type":"exact"},{"name":"suppression of general elicitor induced symbiont innate immunity","type":"exact"},{"name":"suppression of general elicitor-induced symbiont innate immunity","type":"exact"},{"name":"suppression of pathogen-associated molecular pattern-induced symbiont innate immunity","type":"exact"}],"termid":"GO:0052488"}


id: PBO:0056045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTO1 maturation factor of ABCE1","termid":"PBO:0056045"}


id: GO:0009244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the core region of bacterial lipopolysaccharides, which contains ten saccharide residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"},{"relation_name":"is_a","term_name":"lipopolysaccharide core region metabolic process","termid":"GO:0046401"},{"relation_name":"part_of","term_name":"lipopolysaccharide biosynthetic process","termid":"GO:0009103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"lipopolysaccharide core region biosynthetic process","synonyms":[{"name":"LPS core region biosynthetic process","type":"exact"},{"name":"lipopolysaccharide core region anabolism","type":"exact"},{"name":"lipopolysaccharide core region biosynthesis","type":"exact"},{"name":"lipopolysaccharide core region formation","type":"exact"},{"name":"lipopolysaccharide core region synthesis","type":"exact"}],"termid":"GO:0009244"}


id: GO:0102806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaryl-CoA + cyanin betaine = shisonin + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"4-coumaroyl-CoA:cyanidin-3,5-diglucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8170"],"termid":"GO:0102806"}


id: PBO:0081740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF670-ZNF695 readthrough (NMD candidate)","termid":"PBO:0081740"}


id: GO:0019345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cysteine, via the intermediate S-sulfo-L-cysteine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine biosynthetic process","termid":"GO:0019344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"cysteine biosynthetic process via S-sulfo-L-cysteine","synonyms":[{"name":"cysteine anabolism via S-sulfo-L-cysteine","type":"exact"},{"name":"cysteine biosynthesis via S-sulpho-L-cysteine","type":"exact"},{"name":"cysteine biosynthetic process via S-sulpho-L-cysteine","type":"exact"},{"name":"cysteine formation via S-sulfo-L-cysteine","type":"exact"},{"name":"cysteine synthesis via S-sulfo-L-cysteine","type":"exact"}],"termid":"GO:0019345"}


id: GO:0033288
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + hydroxyectoine(out/in) = ADP + phosphate + hydroxyectoine(in/out).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"ATPase-coupled monocarboxylic acid transmembrane transporter activity","termid":"GO:0033285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled hydroxyectoine transmembrane transporter activity","secondary_identifiers":["GO:0033287"],"synonyms":[{"name":"ATP-dependent hydroxyectoine transmembrane transporter activity","type":"exact"},{"name":"hydroxyectoine transmembrane transporter activity","type":"broad"},{"name":"hydroxyectoine-transporting ATPase activity","type":"exact"}],"termid":"GO:0033288"}


id: PBO:0073262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 6","termid":"PBO:0073262"}


id: PBO:0052276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM5C intronic transcript 1","termid":"PBO:0052276"}


id: PBO:0027599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin,_incomplete_secondary_cell_septum","termid":"PBO:0027599"}


id: GO:0047459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-aminobutanoyl-CoA = crotonoyl-CoA + NH4.","definition_xrefs":["EC:4.3.1.14","RHEA:10056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"3-aminobutyryl-CoA ammonia-lyase activity","secondary_identifiers":["MetaCyc:4.3.1.14-RXN","KEGG_REACTION:R03030"],"synonyms":[{"name":"L-3-aminobutyryl-CoA ammonia-lyase (crotonoyl-CoA-forming)","type":"related"},{"name":"L-3-aminobutyryl-CoA ammonia-lyase activity","type":"related"},{"name":"L-3-aminobutyryl-CoA deaminase activity","type":"related"}],"termid":"GO:0047459"}


id: PBO:0083869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein containing five copies of the WD40 motif; controls cell cycle function, sulfur metabolism, and methionine biosynthesis as part of the ubiquitin ligase complex; interacts with and regulates Met4p, localizes within the nucleus; dissociation of Met30p from SCF complex in response to cadmium stress is regulated by Cdc48p","termid":"PBO:0083869"}


id: GO:0140522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of joining two lipid bilayers to form a single membrane.","definition_xrefs":["PMID:10332732","PMID:32100701","PMID:11493675","PMID:32641474","PMID:12600315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"fusogenic activity","termid":"GO:0140522"}


id: PBO:0003630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, involved in endocytic trafficking (predicted)","termid":"PBO:0003630"}


id: GO:0014076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoxetine stimulus. Fluoxetine increases the extracellular level of the neurotransmitter serotonin by inhibiting its reuptake into the presynaptic cell, increasing the level of serotonin available to bind to the postsynaptic receptor.","definition_xrefs":["GOC:ef","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antidepressant","termid":"GO:0036276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fluoxetine","synonyms":[{"name":"response to SSRI","type":"related"},{"name":"response to selective serotonin reuptake inhibitor","type":"related"}],"termid":"GO:0014076"}


id: PR:Q9P7E1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7E1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein P4H10.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.07","synonyms":[{"name":"Spom972h-SPBP4H10.07","type":"exact"}],"termid":"PR:Q9P7E1"}


id: GO:0035262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals.","definition_xrefs":["ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gonad morphogenesis","termid":"GO:0035262"}


id: PBO:0072069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 7","termid":"PBO:0072069"}


id: GO:1901485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription factor catabolic process.","definition_xrefs":["PMID:22833559","GOC:al","GOC:vw","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription factor catabolic process (obsolete GO:1901485)","synonyms":[{"name":"activation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"activation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"activation of transcription factor breakdown","type":"exact"},{"name":"activation of transcription factor catabolic process","type":"narrow"},{"name":"activation of transcription factor catabolism","type":"exact"},{"name":"activation of transcription factor degradation","type":"exact"},{"name":"positive regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"positive regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"positive regulation of transcription factor breakdown","type":"exact"},{"name":"positive regulation of transcription factor catabolism","type":"exact"},{"name":"positive regulation of transcription factor degradation","type":"exact"},{"name":"up regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"up regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"up regulation of transcription factor breakdown","type":"exact"},{"name":"up regulation of transcription factor catabolic process","type":"exact"},{"name":"up regulation of transcription factor catabolism","type":"exact"},{"name":"up regulation of transcription factor degradation","type":"exact"},{"name":"up-regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"up-regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"up-regulation of transcription factor breakdown","type":"exact"},{"name":"up-regulation of transcription factor catabolic process","type":"exact"},{"name":"up-regulation of transcription factor catabolism","type":"exact"},{"name":"up-regulation of transcription factor degradation","type":"exact"},{"name":"upregulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"upregulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"upregulation of transcription factor breakdown","type":"exact"},{"name":"upregulation of transcription factor catabolic process","type":"exact"},{"name":"upregulation of transcription factor catabolism","type":"exact"},{"name":"upregulation of transcription factor degradation","type":"exact"}],"termid":"GO:1901485"}


id: FYPO:0001266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during cellular response to osmotic stress","termid":"FYPO:0002290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to salt stress","synonyms":[{"name":"normal protein phosphorylation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001266"}


id: FYPO:0004059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is normal (i.e. indistinguishable from wild type) at an CRE promoter in a chromosome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic recombination","termid":"FYPO:0000488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic recombination at CRE promoter","synonyms":[{"name":"normal meiotic recombination at M26 binding site","type":"exact"}],"termid":"FYPO:0004059"}


id: PR:Q09840
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aah2 gene.","definition_xrefs":["UniProtKB:Q09840","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.14c","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aah2","type":"exact"}],"termid":"PR:Q09840"}


id: PBO:0052274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5B","termid":"PBO:0052274"}


id: PR:Q9UST9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC336.05c gene.","definition_xrefs":["UniProtKB:Q9UST9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.05c","synonyms":[{"name":"HEN1 methyltransferase homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC336.05c","type":"exact"}],"termid":"PR:Q9UST9"}


id: GO:0097188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts are deposited into the calcareous tooth structure known as dentin.","definition_xrefs":["GOC:sl","PMID:10206335","PMID:21196346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth mineralization","termid":"GO:0034505"},{"relation_name":"part_of","term_name":"dentinogenesis","termid":"GO:0097187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dentin mineralization","synonyms":[{"name":"dentine mineralization","type":"exact"}],"termid":"GO:0097188"}


id: PBO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER heat shock protein Lhs1 (predicted)","termid":"PBO:0000254"}


id: PBO:0013797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin-related protein (predicted)","termid":"PBO:0013797"}


id: PBO:0027156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_asparagine_level","termid":"PBO:0027156"}


id: PATO:0001335
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mating type that indicates whether the F plasmid has integrated into the chromosome.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating type","termid":"PATO:0001895"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial mating type","termid":"PATO:0001335"}


id: PBO:0005680
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during stationary phase","termid":"PBO:0005680"}


id: GO:0038078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate, where the MAP kinase (MAPK) is part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase phosphatase activity involved in regulation of innate immune response (obsolete GO:0038078)","synonyms":[{"name":"MAPK phosphatase activity involved in regulation of innate immune response","type":"exact"}],"termid":"GO:0038078"}


id: PBO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit 2","termid":"PBO:0001877"}


id: PBO:0064820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R3B divergent transcript","termid":"PBO:0064820"}


id: PBO:0048262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosamine (N-acetyl)-6-sulfatase","termid":"PBO:0048262"}


id: PBO:0036466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 complex ubiquitin-protein ligase E3 subunit, Hrd1","termid":"PBO:0036466"}


id: PBO:0078426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 3-1","termid":"PBO:0078426"}


id: PBO:0062130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 10","termid":"PBO:0062130"}


id: PBO:0051763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 7 pseudogene 2","termid":"PBO:0051763"}


id: RO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"positively_regulated_by","termid":"RO:0002336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_positive_regulatory_component_activity","termid":"RO:0002015"}


id: PBO:0028437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_miconazole","termid":"PBO:0028437"}


id: PR:Q9UT50
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slf1 gene.","definition_xrefs":["UniProtKB:Q9UT50","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C821.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.03c","synonyms":[{"name":"Spom972h-slf1","type":"exact"}],"termid":"PR:Q9UT50"}


id: PBO:0061079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK1 homeobox 1","termid":"PBO:0061079"}


id: PBO:0050873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha","termid":"PBO:0050873"}


id: GO:1900878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (Z)-nonadeca-1,14-diene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"(Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"(Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900878"}


id: PBO:0081858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF790 antisense RNA 1","termid":"PBO:0081858"}


id: GO:0034113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a cell of a different type via adhesion molecules.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}


id: PBO:0073310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 6","termid":"PBO:0073310"}


id: GO:0006155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete adenosine deaminase reaction (obsolete GO:0006155)","synonyms":[{"name":"adenosine deaminase reaction","type":"exact"}],"termid":"GO:0006155"}


id: FYPO:0006100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased, and some of the protein is present in the nucleus instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm","termid":"FYPO:0006099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus","synonyms":[{"name":"decreased protein localisation to cytoplasm, with protein mislocalised to nucleus","type":"exact"},{"name":"decreased protein localization in cytoplasm, with protein mislocalized to nucleus","type":"exact"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during vegetative growth","type":"exact"},{"name":"reduced protein localization to cytoplasm, with protein mislocalized to nucleus","type":"exact"}],"termid":"FYPO:0006100"}


id: FYPO:0000489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion distribution is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion organization","termid":"FYPO:0000809"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal mitochondrial distribution","synonyms":[{"name":"abnormal mitochondrial distribution during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial distribution during vegetative growth","type":"exact"},{"name":"mitochondrial distribution: abnormal","type":"related"}],"termid":"FYPO:0000489"}


id: PBO:0004754
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds TR-BOX 5'-TTCTTTGTT-3'","termid":"PBO:0004754"}


id: GO:0010424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 or N-4 of a cytosine located within a CG sequence in a DNA molecule.","definition_xrefs":["GOC:tb","PMID:17239600","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation on cytosine within a CG sequence (obsolete GO:0010424)","synonyms":[{"name":"cytosine methylation within a CG sequence","type":"exact"}],"termid":"GO:0010424"}


id: GO:0141135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a chemokine signaling pathway, a G protein-coupled receptor signal transduction pathway activated by a chemokine. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16581912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host G protein-coupled receptor signal transduction","termid":"GO:0075120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host chemokine signal transduction pathway","termid":"GO:0141135"}


id: PBO:0044672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopa decarboxylase","termid":"PBO:0044672"}


id: PBO:0073383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SETBP1 divergent transcript","termid":"PBO:0073383"}


id: PBO:0050025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ alpha 1","termid":"PBO:0050025"}


id: PBO:0065468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 9","termid":"PBO:0065468"}


id: PBO:0002985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous Pmf1 factor 1, implicated in isoleucine biosynthesis (predicted)","termid":"PBO:0002985"}


id: PBO:0076649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 4","termid":"PBO:0076649"}


id: PATO:0000056
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's disposition to synthesize a particular organic compound required for its growth.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Trophic_level"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophic quality","synonyms":[{"name":"nutritional quality","type":"related"}],"termid":"PATO:0000056"}


id: PBO:0043141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 9","termid":"PBO:0043141"}


id: PBO:0048039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrous sheath interacting protein 2","termid":"PBO:0048039"}


id: GO:0030350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an iron-responsive element, a regulatory sequence found in the 5'- and 3'-untranslated regions of mRNAs encoding many iron-binding proteins.","definition_xrefs":["PMID:3198610","PMID:8710843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"iron-responsive element binding","synonyms":[{"name":"IRE binding","type":"exact"}],"termid":"GO:0030350"}


id: GO:0060494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an endodermal cell changing the fate of the endodermal cell.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive cell-cell signaling","termid":"GO:0031129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inductive mesenchymal-endodermal cell signaling","synonyms":[{"name":"inductive mesenchymal-endodermal cell signalling","type":"exact"}],"termid":"GO:0060494"}


id: PBO:0048531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 7","termid":"PBO:0048531"}


id: PBO:0073504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 3","termid":"PBO:0073504"}


id: GO:0007210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a serotonin receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to dopamine","termid":"GO:1903351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"serotonin receptor signaling pathway","synonyms":[{"name":"serotonin receptor signalling pathway","type":"exact"}],"termid":"GO:0007210"}


id: GO:0050302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + indole-3-acetaldehyde + O2 = (indol-3-yl)acetate + H+ + H2O2.","definition_xrefs":["RHEA:16277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl-aldehyde oxidase activity","termid":"GO:0018488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetaldehyde oxidase activity","secondary_identifiers":["EC:1.2.3.7","KEGG_REACTION:R02681","MetaCyc:INDOLE-3-ACETALDEHYDE-OXIDASE-RXN"],"synonyms":[{"name":"(indol-3-yl)acetaldehyde:oxygen oxidoreductase activity","type":"related"},{"name":"AO1","type":"related"},{"name":"IAA oxidase activity","type":"related"},{"name":"IAAld oxidase activity","type":"related"},{"name":"indole-3-acetaldehyde:oxygen oxidoreductase activity","type":"related"},{"name":"indoleacetaldehyde oxidase activity","type":"related"}],"termid":"GO:0050302"}


id: PBO:0078208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-1 (non-functional)","termid":"PBO:0078208"}


id: GO:0005237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific extracellular inhibitory ligand has been bound by the channel complex or one of its constituent parts. Inhibitory ligands, such as GABA or glycine, open chloride-selective channels.","definition_xrefs":["ISBN:0323037070","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"inhibitory extracellular ligand-gated monoatomic ion channel activity","synonyms":[{"name":"inhibitory extracellular ligand-gated ion channel activity","type":"broad"}],"termid":"GO:0005237"}


id: GO:0021714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the inferior olivary nucleus is generated and organized. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"medulla oblongata morphogenesis","termid":"GO:0021579"},{"relation_name":"part_of","term_name":"inferior olivary nucleus development","termid":"GO:0021713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus morphogenesis","synonyms":[{"name":"inferior olive morphogenesis","type":"related"}],"termid":"GO:0021714"}


id: PBO:0011477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin homolog Far8","termid":"PBO:0011477"}


id: PBO:0038565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABL proto-oncogene 1, non-receptor tyrosine kinase","termid":"PBO:0038565"}


id: GO:0110158
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A calcium-dependent protease complex that processes its substrate by limited proteolysis rather than degrading it. In some cases limited proteolysis is required for the activation of its substrate.","definition_xrefs":["PMID:10639123","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caspase complex","termid":"GO:0008303"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"calpain complex","synonyms":[{"name":"M-calpain","type":"narrow"},{"name":"mu-calpain","type":"narrow"}],"termid":"GO:0110158"}


id: PBO:0074830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 26","termid":"PBO:0074830"}


id: FYPO:0001081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall polysaccharide level","termid":"FYPO:0002266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002946","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell wall alpha-glucan level","synonyms":[{"name":"decreased cell wall alpha-D-glucan level","type":"exact"},{"name":"decreased cell wall alpha-glucan accumulation","type":"related"},{"name":"decreased cell wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall alpha-glucan level during vegetative growth","type":"exact"},{"name":"reduced cell wall alpha-glucan level","type":"exact"}],"termid":"FYPO:0001081"}


id: GO:0034249
data:
  {"annotated_genes":["SJAG_00792","SJAG_02380","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"},{"annotations":[107524,111652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"negatively_regulates","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00792":null,"SJAG_01187":null,"SJAG_02380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of amide metabolism","type":"exact"},{"name":"negative regulation of cellular amide metabolic process","type":"exact"}],"termid":"GO:0034249","terms_by_termid":{"GO:1905569":null,"GO:2001211":null}}


id: PBO:0072185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 1","termid":"PBO:0072185"}


id: PBO:0061450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NR4A1 antisense RNA","termid":"PBO:0061450"}


id: GO:0035074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The act of becoming a pupa, a resting stage in the life cycle of organisms with complete metamorphosis. This event marks the end of the prepupal period and the beginning of the pupal period.","definition_xrefs":["ISBN:0582227089","GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"pupal development","termid":"GO:0035209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pupation","secondary_identifiers":["Wikipedia:Pupa"],"synonyms":[{"name":"head eversion","type":"exact"},{"name":"prepupal-pupal transition","type":"exact"}],"termid":"GO:0035074"}


id: GO:0071692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported from one specific location in the extracellular region to another, or maintained in a specific extracellular location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to extracellular region","synonyms":[{"name":"protein localisation in extracellular region","type":"exact"},{"name":"protein localization in extracellular region","type":"exact"}],"termid":"GO:0071692"}


id: GO:0008623
data:
  {"annotated_genes":["SJAG_04879"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69353],"is_not":false,"summary":null,"term":"GO:0008623"}]},"cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals, Isw2 in S. cerevisiae), an ACF1 homolog, and additional small histone fold subunits (generally two of these, but Xenopus has only one and some additional non-conserved subunits). CHRAC plays roles in the regulation of RNA polymerase II transcription and in DNA replication and repair.","definition_xrefs":["GOC:bf","GOC:krc","PMID:21810179","PMID:9252192","PMID:15284901","PMID:16568949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04879":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"CHRAC","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0016588"],"synonyms":[{"name":"ISW2 complex","type":"narrow"},{"name":"chromatin accessibility complex","type":"exact"}],"termid":"GO:0008623","terms_by_termid":{"GO:0008623":null}}


id: PBO:0083315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF DAP2/YHR028C","termid":"PBO:0083315"}


id: GO:0071108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K48-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K48-linked deubiquitination","termid":"GO:0071108"}


id: PBO:0069280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 536, pseudogene","termid":"PBO:0069280"}


id: PBO:0056549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCHR2 antisense RNA 1","termid":"PBO:0056549"}


id: PBO:0044355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 42","termid":"PBO:0044355"}


id: PBO:0053667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 845","termid":"PBO:0053667"}


id: PR:Q10133
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein rho2 (Schizosaccharomyces pombe)","termid":"PR:000050250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16.01","synonyms":[{"name":"Spom972h-rho2","type":"exact"}],"termid":"PR:Q10133"}


id: GO:0015940
data:
  {"annotated_genes":["SJAG_00043","SJAG_05200","SJAG_03679","SJAG_04481","SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84925,94815,94819,98861,109536],"is_not":false,"summary":null,"term":"GO:0015940"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pantothenate, the anion of pantothenic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.","definition_xrefs":["ISBN:0721662544","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pantothenate metabolic process","termid":"GO:0015939"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_04481":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"pantothenate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033317","GO:0033318"],"synonyms":[{"name":"pantothenate anabolism","type":"exact"},{"name":"pantothenate anabolism from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate anabolism from valine","type":"narrow"},{"name":"pantothenate biosynthesis","type":"exact"},{"name":"pantothenate biosynthesis from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate biosynthesis from valine","type":"narrow"},{"name":"pantothenate biosynthetic process from 2-dehydropantolactone","type":"narrow"},{"name":"pantothenate biosynthetic process from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate biosynthetic process from valine","type":"narrow"},{"name":"pantothenate formation","type":"exact"},{"name":"pantothenate formation from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate formation from valine","type":"narrow"},{"name":"pantothenate synthesis","type":"exact"},{"name":"pantothenate synthesis from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate synthesis from valine","type":"narrow"},{"name":"vitamin B5 biosynthesis","type":"exact"},{"name":"vitamin B5 biosynthetic process","type":"exact"}],"termid":"GO:0015940","terms_by_termid":{"GO:0015940":null}}


id: PBO:0082461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcineurin A; one isoform (the other is Cmp2p) of the catalytic subunit of calcineurin, a Ca++/calmodulin-regulated protein phosphatase which regulates Crz1p (a stress-response transcription factor), the other calcineurin subunit is CNB1; regulates the function of Aly1p alpha-arrestin; CNA1 has a paralog, CMP2, that arose from the whole genome duplication","termid":"PBO:0082461"}


id: PBO:0056665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 3","termid":"PBO:0056665"}


id: GO:0052664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a primary nitroalkane + H2O + O2 = an aldehyde + H+ + H2O2 + nitrite; also converts secondary nitroalkanes to a ketone.","definition_xrefs":["EC:1.7.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","termid":"GO:0016663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitroalkane oxidase activity","synonyms":[{"name":"NAO activity","type":"related"},{"name":"nitroalkane reductase activity","type":"related"},{"name":"nitroalkane:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0052664"}


id: GO:0043691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peripheral cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism.","definition_xrefs":["PMID:7751809","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"reverse cholesterol transport","termid":"GO:0043691"}


id: PBO:0040207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTN2 antisense RNA 1","termid":"PBO:0040207"}


id: PBO:0068265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 2","termid":"PBO:0068265"}


id: GO:0071583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of zinc ions (Zn2+) from one side of a membrane to the other.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zinc ion transmembrane transport","termid":"GO:0071580"},{"relation_name":"is_a","term_name":"negative regulation of zinc ion transport","termid":"GO:0071582"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of zinc ion transmembrane transport","synonyms":[{"name":"negative regulation of zinc ion membrane transport","type":"exact"}],"termid":"GO:0071583"}


id: PBO:0017039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endonuclease, possibly DNA damage related (predicted)","termid":"PBO:0017039"}


id: PBO:0087648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; required for assembly and DNA binding activity of the complex","termid":"PBO:0087648"}


id: GO:0042813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a Wnt protein and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"Wnt receptor activity","synonyms":[{"name":"Wnt-activated receptor activity","type":"exact"},{"name":"frizzled receptor activity","type":"related"},{"name":"frizzled-2 receptor activity","type":"related"}],"termid":"GO:0042813"}


id: PBO:0038534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 10, depalmitoylase","termid":"PBO:0038534"}


id: PBO:0072152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 29","termid":"PBO:0072152"}


id: PR:Q9UUH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC630.07c gene.","definition_xrefs":["UniProtKB:Q9UUH5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C630.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.07c","synonyms":[{"name":"Spom972h-SPAC630.07c","type":"exact"}],"termid":"PR:Q9UUH5"}


id: PBO:0083101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA end-binding protein required for nonhomologous end joining (NHEJ); subunit of the DNA ligase IV complex involved in initial end binding, intermolecular ligation, and DNA ligase reactivation after completion of repair; phosphorylation by Tpk1p is required for DNA damage induced NHEJ and for nuclear targeting of Nej1p and Lif1p; human homolog NHEJ1 is phosphorylated by human Tpk1p homolog PRKACB, regulating NHEJ; transcriptionally repressed by MAT heterozygosity","termid":"PBO:0083101"}


id: GO:0045330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of an ester bond by a mechanism involving a catalytically active aspartic acid residue.","definition_xrefs":["GOC:mah","UniProtKB-KW:KW-0063"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartyl esterase activity (obsolete GO:0045330)","termid":"GO:0045330"}


id: GO:0072223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular mesangium over time, from its formation to the mature structure. The metanephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the metanephros, which helps to support the capillary loops in a renal glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangium development","termid":"GO:0072109"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature development","termid":"GO:0072239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular mesangium development","termid":"GO:0072223"}


id: PBO:0071592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 9","termid":"PBO:0071592"}


id: GO:0015005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Brilliant blue copper-containing protein of low molecular weight found in some bacteria; thought to transfer electrons to cytochrome oxidase. This definition includes pseudoazurin.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete azurin (obsolete GO:0015005)","synonyms":[{"name":"azurin","type":"exact"}],"termid":"GO:0015005"}


id: PBO:0085170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oleate-activated transcription factor; subunit of a heterodimeric complex with Pip2p, which binds to oleate-response elements (ORE) in the promoter of genes involved in beta-oxidation of fatty acids, peroxisome organization and biogenesis, activating transcription in the presence of oleate; regulates chromatin silencing at telomeres; involved in diauxic shift; OAF1 has a paralog, PIP2, that arose from the whole genome duplication","termid":"PBO:0085170"}


id: PBO:0041778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain small subunit 1 pseudogene 1","termid":"PBO:0041778"}


id: GO:0016509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain (3S)-3-hydroxy fatty acyl-CoA + NAD+ = a long-chain 3-oxo-fatty acyl-CoA + H+ + NADH. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:pde","EC:1.1.1.211","RHEA:52656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxyacyl-CoA dehydrogenase activity","termid":"GO:0003857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"long-chain-3-hydroxyacyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.211-RXN"],"synonyms":[{"name":"LCHAD","type":"related"},{"name":"beta-hydroxyacyl-CoA dehydrogenase activity","type":"related"},{"name":"long-chain 3-hydroxyacyl coenzyme A dehydrogenase activity","type":"related"},{"name":"long-chain-(S)-3-hydroxyacyl-CoA:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0016509"}


id: PBO:0069668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 945, pseudogene","termid":"PBO:0069668"}


id: PBO:0050906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein 44 like","termid":"PBO:0050906"}


id: GO:0009609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiotic bacterium, a bacterium living in close physical association with another organism.","definition_xrefs":["GOC:hb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"},{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to symbiotic bacterium","synonyms":[{"name":"response to symbiotic bacteria","type":"exact"}],"termid":"GO:0009609"}


id: PBO:0001907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tryptophan-tRNA ligase Msw1 (predicted)","termid":"PBO:0001907"}


id: PBO:0089343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter","termid":"PBO:0089343"}


id: PBO:0030973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation","termid":"PBO:0030973"}


id: PBO:0038615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin I converting enzyme","termid":"PBO:0038615"}


id: PBO:0078499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 2-2","termid":"PBO:0078499"}


id: GO:0047237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP.","definition_xrefs":["EC:2.4.1.174","MetaCyc:2.4.1.174-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:23464"],"synonyms":[{"name":"N-acetylgalactosaminyltransferase I activity","type":"exact"},{"name":"UDP-N-acetyl-D-galactosamine:D-glucuronyl-1,3-beta-D-galactosyl-proteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"glucuronylgalactosylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine-chondroitin acetylgalactosaminyltransferase I","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-chondroitinacetylgalactosaminyltransferase I activity","type":"related"}],"termid":"GO:0047237"}


id: PR:O14072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A manganese-transporting ATPase 13A1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese-transporting ATPase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.07c","secondary_identifiers":["UniProtKB:O14072"],"synonyms":[{"name":"Spom972h-ATP13A1","type":"exact"}],"termid":"PR:O14072"}


id: GO:0098542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of another organism that act to protect the cell or organism from damage caused by that organism.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to other organism","secondary_identifiers":["GO:0009814"],"synonyms":[{"name":"defence response incompatible interaction","type":"narrow"},{"name":"defence response to pathogen, incompatible interaction","type":"narrow"},{"name":"defense response, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogen","type":"narrow"}],"termid":"GO:0098542"}


id: PBO:0027295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_tetranucleate_vegetative_cell","termid":"PBO:0027295"}


id: GO:0035672
data:
  {"annotated_genes":["SJAG_03577","SJAG_01344","SJAG_02602","SJAG_01660","SJAG_03497","SJAG_02139","SJAG_05182","SJAG_05213","SJAG_00922","SJAG_01983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63390],"is_not":false,"summary":null,"term":"GO:0035672"},{"annotations":[99123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[114527,114528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035442"},{"annotations":[91580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[109302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[93124,114385,92128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[91581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034775"},{"annotations":[114386,92129,93125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[104121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[99126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The process in which an oligopeptide is transported across a membrane. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:vw","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transport","termid":"GO:0006857"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_02139":null,"SJAG_02602":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05182":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"oligopeptide transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"oligopeptide membrane transport","type":"exact"}],"termid":"GO:0035672","terms_by_termid":{"GO:0034775":null,"GO:0035442":null,"GO:0035672":null,"GO:0036246":null,"GO:0071996":null,"GO:0098709":null,"GO:0140206":null,"GO:0140207":null,"GO:0160007":null,"GO:1901583":null}}


id: PBO:0027904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation_during_mitosis","termid":"PBO:0027904"}


id: PR:O14297
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.15 gene.","definition_xrefs":["UniProtKB:O14297","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.15","synonyms":[{"name":"Spom972h-SPAC9E9.15","type":"exact"}],"termid":"PR:O14297"}


id: PBO:0030928
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_citrate_(Si)-synthase_activity","termid":"PBO:0030928"}


id: MOD:00932
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:499","PubMed:11821862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDBEST tag for quantitation","synonyms":[{"name":"Heavy IDBEST tag for quantitation","type":"related"},{"name":"IGBP:13C(2)","type":"related"}],"termid":"MOD:00932"}


id: PBO:0080892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein F2","termid":"PBO:0080892"}


id: PBO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat","termid":"PBO:0000328"}


id: GO:0042899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which arabinan is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transport","termid":"GO:0015774"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"arabinan transmembrane transport","synonyms":[{"name":"arabinan transport","type":"related"}],"termid":"GO:0042899"}


id: GO:0030277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protection of epithelial surfaces of the gastrointestinal tract from proteolytic and caustic digestive agents.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial structure maintenance","termid":"GO:0010669"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of gastrointestinal epithelium","termid":"GO:0030277"}


id: PBO:0036448
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Can't Stop Synthesising cell wall","termid":"PBO:0036448"}


id: RO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x overlaps y if and only if there exists some z such that x has part z and z part of y","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlaps","termid":"RO:0002131"}


id: PBO:0088260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit Sgf73","termid":"PBO:0088260"}


id: PBO:0086809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YHR022C is not an essential gene","termid":"PBO:0086809"}


id: GO:0034605
data:
  {"annotated_genes":["SJAG_03949","SJAG_01584","SJAG_04567","SJAG_03319","SJAG_04055","SJAG_01186","SJAG_00436","SJAG_02381","SJAG_03815","SJAG_02266","SJAG_04082","SJAG_04388","SJAG_04187","SJAG_03527","SJAG_02426"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84875,86840,88110,91750,92544,96624,101112,101399,106145,106146,111670,111671],"is_not":false,"summary":null,"term":"GO:0034605"},{"annotations":[100330,100442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[112600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to heat","termid":"GO:0009408"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01584":null,"SJAG_02266":null,"SJAG_02381":null,"SJAG_02426":null,"SJAG_03319":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03949":null,"SJAG_04055":null,"SJAG_04082":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to heat","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to heat stress","type":"exact"}],"termid":"GO:0034605","terms_by_termid":{"GO:0031990":null,"GO:0034605":null,"GO:0070370":null}}


id: FYPO:0001357
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115482,115485,115483,115481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"}],"single_locus_phenotype":[{"annotations":[115634,115760,115761,115762],"is_not":false,"summary":null,"term":"FYPO:0001357"},{"annotations":[115391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grows normally (i.e. indistinguishably from wild type) in the vegetative growth phase of the life cycle. Cell population growth refers to an increase in the number of cells in the population as individual cells grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"},{"relation_name":"is_a","term_name":"vegetative cell population growth phenotype","termid":"FYPO:0001358"},{"relation_name":"is_a","term_name":"viable vegetative cell population","termid":"FYPO:0002060"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_00601":null,"SJAG_01355":null,"SJAG_01946":null,"SJAG_03198":null,"SJAG_03575":null,"SJAG_03720":null},"genotype_count":8,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta":{"display_name":"apc2-361(E548K ts) cem1delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts) oar2-51(Y189D cold sensitive)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"apc2-361(E548K ts) oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta":{"display_name":"apc2-361(E548K ts) oar2delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03575","SJAG_01946","SJAG_03198"],"name":"normal vegetative cell population growth","references_by_uniquename":{"PMID:23090706":null,"PMID:23786411":null,"PMID:25318672":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01355","SJAG_00426","SJAG_03720","SJAG_00601"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","rip1delta","tel1delta","cox6delta"],"synonyms":[{"name":"vegetative growth normal","type":"broad"},{"name":"vegetative population growth normal","type":"exact"}],"termid":"FYPO:0001357","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000674":null,"FYPO:0001357":null,"FYPO:0001690":null}}


id: FYPO:0007463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the termination of RNA transcription from a DNA template is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0006353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype during vegetative growth","termid":"FYPO:0000290"},{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription termination","synonyms":[{"name":"normal DNA-templated transcription, termination","type":"exact"},{"name":"normal termination of transcription","type":"exact"},{"name":"normal transcription termination during mitotic cell cycle","type":"related"},{"name":"normal transcription termination during vegetative growth","type":"exact"}],"termid":"FYPO:0007463"}


id: PBO:0076501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 1","termid":"PBO:0076501"}


id: PBO:0084463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway; interacts with Ssk1p, leading to autophosphorylation and activation of Ssk2p which phosphorylates Pbs2p; also mediates actin cytoskeleton recovery from osmotic stress; a HOG-independent function of Ssk2p mediates the calcium-sensitive phenotype of the ptp2 msg5 double disruptant; SSK2 has a paralog, SSK22, that arose from the whole genome duplication","termid":"PBO:0084463"}


id: GO:0033464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"GGG codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033464"}


id: GO:0035705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a T-helper 17 cell in response to an external stimulus.","definition_xrefs":["GOC:BHF","CL:0000899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 cell chemotaxis","synonyms":[{"name":"Th17 cell chemotaxis","type":"exact"}],"termid":"GO:0035705"}


id: FYPO:0003389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable, is elongated, has a larger diameter than normal near the equator (but not at the ends), and has an overall volume greater than normal.","definition_xrefs":["PMID:24554432","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"},{"relation_name":"is_a","term_name":"viable swollen elongated vegetative cell","termid":"FYPO:0002479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"viable elongated vegetative cell with swollen medial region","synonyms":[{"name":"medial bulge formation phenotype","type":"exact"},{"name":"viable elongated vegetative cell with swollen medial region during mitotic cell cycle","type":"related"},{"name":"viable elongated vegetative cell with swollen medial region during vegetative growth","type":"exact"}],"termid":"FYPO:0003389"}


id: GO:1903288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of potassium ion import across the plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:rl","GOC:mtg_cardiac_conduct_nov11","PMID:10636900","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transport","termid":"GO:1901381"},{"relation_name":"is_a","term_name":"regulation of potassium ion import","termid":"GO:1903286"},{"relation_name":"positively_regulates","term_name":"potassium ion import across plasma membrane","termid":"GO:1990573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of potassium ion import across plasma membrane","synonyms":[{"name":"activation of potassium import","type":"narrow"},{"name":"activation of potassium ion import","type":"narrow"},{"name":"activation of potassium ion uptake","type":"narrow"},{"name":"positive regulation of potassium import","type":"exact"},{"name":"positive regulation of potassium ion import","type":"broad"},{"name":"positive regulation of potassium ion uptake","type":"exact"},{"name":"up regulation of potassium import","type":"exact"},{"name":"up regulation of potassium ion import","type":"exact"},{"name":"up regulation of potassium ion uptake","type":"exact"},{"name":"up-regulation of potassium import","type":"exact"},{"name":"up-regulation of potassium ion import","type":"exact"},{"name":"up-regulation of potassium ion uptake","type":"exact"},{"name":"upregulation of potassium import","type":"exact"},{"name":"upregulation of potassium ion import","type":"exact"},{"name":"upregulation of potassium ion uptake","type":"exact"}],"termid":"GO:1903288"}


id: PR:O13932
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BET1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00418","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein bet1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.13","secondary_identifiers":["UniProtKB:O13932"],"synonyms":[{"name":"Spom972h-BET1","type":"exact"}],"termid":"PR:O13932"}


id: PBO:0086455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; YPR071W is not an essential gene; YPR071W has a paralog, YIL029C, that arose from a single-locus duplication","termid":"PBO:0086455"}


id: PBO:0026761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_cellular_response_to_UV","termid":"PBO:0026761"}


id: PBO:0078660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 13-1","termid":"PBO:0078660"}


id: GO:0061552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of ganglion are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"ganglion development","termid":"GO:0061548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion morphogenesis","synonyms":[{"name":"ganglia morphogenesis","type":"related"}],"termid":"GO:0061552"}


id: PBO:0052058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl-tRNA synthetase 1 pseudogene 2","termid":"PBO:0052058"}


id: PBO:0113817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine O-acetyltransferase","termid":"PBO:0113817"}


id: PBO:0049719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 4 pseudogene 1","termid":"PBO:0049719"}


id: GO:0035511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Removal of the methyl group from one or more nucleotides within a DNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:18775698","PMID:16482161","PMID:12594517"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidative DNA demethylation (obsolete GO:0035511)","termid":"GO:0035511"}


id: PBO:0077355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 95","termid":"PBO:0077355"}


id: PBO:0069586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 860, pseudogene","termid":"PBO:0069586"}


id: PBO:0038283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genotype_comment","termid":"PBO:0038283"}


id: GO:0031544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl trans-3-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"peptidyl-proline 3-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-9630769"],"termid":"GO:0031544"}


id: PBO:0069051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 297, pseudogene","termid":"PBO:0069051"}


id: GO:0010463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation","termid":"GO:0010463"}


id: PBO:0088577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase Cts2","termid":"PBO:0088577"}


id: PBO:0059055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNX1 antisense RNA 2","termid":"PBO:0059055"}


id: PBO:0060271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 6","termid":"PBO:0060271"}


id: PBO:0030911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_physical_quality_phenotype_during_vegetative_growth","termid":"PBO:0030911"}


id: PBO:0062868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 5","termid":"PBO:0062868"}


id: PBO:0072844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAPCD1 antisense RNA 1","termid":"PBO:0072844"}


id: PBO:0083678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein of unknown function; contains a phox (PX) homology domain; binds to both phosphatidylinositol-3-phosphate (PtdIns(3)P) and proteins involved in ER-Golgi or vesicular transport","termid":"PBO:0083678"}


id: PBO:0029876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3_acetylation","termid":"PBO:0029876"}


id: FYPO:0007955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the rate or speed of microtubule polymerization, i.e. the additionl of tubulin dimers to a microtubule, is abnormal.","definition_xrefs":["PomBase:val","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"abnormal rate of microtubule polymerisation during vegetative growth","type":"exact"}],"termid":"FYPO:0007955"}


id: PR:O59718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nem1 gene.","definition_xrefs":["UniProtKB:O59718","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope morphology protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.10c","synonyms":[{"name":"Spom972h-nem1","type":"exact"}],"termid":"PR:O59718"}


id: FYPO:0005775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to acetaldehyde. Cells stop growing (and may die) at a concentration of acetaldehyde that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to acetaldehyde","synonyms":[{"name":"hypersensitive to acetaldehyde","type":"exact"},{"name":"sensitive to acetaldehyde during mitotic cell cycle","type":"related"},{"name":"sensitive to acetaldehyde during vegetative growth","type":"exact"}],"termid":"FYPO:0005775"}


id: PATO:0000096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000096 relative drug sensitivity (obsolete PATO:0000096)","termid":"PATO:0000096"}


id: PR:000050519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the scr1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein scr1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1D7.02c","termid":"PR:000050519"}


id: PBO:0064442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POC1 centriolar protein A","termid":"PBO:0064442"}


id: PBO:0067392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 497, pseudogene","termid":"PBO:0067392"}


id: FYECO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamatic acid as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, cysteine nitrogen source","synonyms":[{"name":"glucose minimal medium, cysteine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, cysteine nitrogen source","type":"related"}],"termid":"FYECO:0000416"}


id: PBO:0114294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein anchor Pex26","termid":"PBO:0114294"}


id: PBO:0109024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA1 neighbor of OC90","termid":"PBO:0109024"}


id: GO:0097277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of urea at the level of the cell.","definition_xrefs":["PMID:12695560","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular urea homeostasis (obsolete GO:0097277)","termid":"GO:0097277"}


id: GO:0051710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the cytolysis by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytolysis in another organism (obsolete GO:0051710)","synonyms":[{"name":"regulation of cytolysis in other organism","type":"exact"},{"name":"regulation of cytolysis of cells of another organism","type":"exact"}],"termid":"GO:0051710"}


id: PBO:0089573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Nop56","termid":"PBO:0089573"}


id: GO:0010286
data:
  {"annotated_genes":["SJAG_03527","SJAG_04187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100330,100442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"}]},"cv_name":"biological_process","definition":"Any process that increases heat tolerance of an organism in response to high temperatures.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to heat","termid":"GO:0009408"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03527":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heat acclimation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thermotolerance","type":"related"}],"termid":"GO:0010286","terms_by_termid":{"GO:0070370":null}}


id: GO:0021575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the hindbrain is generated and organized. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain morphogenesis","synonyms":[{"name":"rhombencephalon morphogenesis","type":"related"}],"termid":"GO:0021575"}


id: PBO:0041451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 53","termid":"PBO:0041451"}


id: PBO:0067337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 430, pseudogene","termid":"PBO:0067337"}


id: GO:1903162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any serine transmembrane transporter activity that is involved in serine import into cell.","definition_xrefs":["GO_REF:0000061","GOC:TermGenie","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete serine transmembrane transporter activity involved in serine import into cell (obsolete GO:1903162)","synonyms":[{"name":"serine transmembrane transporter activity involved in serine import into cell","type":"exact"}],"termid":"GO:1903162"}


id: PBO:0056936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-1","termid":"PBO:0056936"}


id: GO:0048324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"axial mesodermal cell fate determination","termid":"GO:0048323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axial mesodermal cell fate determination","termid":"GO:0048324"}


id: GO:0070251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pristanate + CoA = AMP + diphosphate + pristanoyl-CoA.","definition_xrefs":["GOC:pde","PMID:10198260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"pristanate-CoA ligase activity","secondary_identifiers":["Reactome:R-HSA-389632","RHEA:47264"],"synonyms":[{"name":"pristanate:CoA ligase (AMP-forming)","type":"exact"},{"name":"pristanoyl-CoA ligase activity","type":"exact"}],"termid":"GO:0070251"}


id: PBO:0045830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 20","termid":"PBO:0045830"}


id: PBO:0113009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase involved in protein folding and NLS-directed nuclear transport; HSP70 family member; required for ubiquitin-dependent degradation of short-lived proteins; forms a chaperone complex with Ydj1p; localizes to the nucleus, cytoplasm and cell wall; unique functional specificity in the propagation of yeast [URE3] prions and vacuolar-mediated degradation of gluconeogenic enzymes; general targeting factor of Hsp104p to prion fibrils; 98% identity with paralog Ssa2p","termid":"PBO:0113009"}


id: PBO:0050635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 1","termid":"PBO:0050635"}


id: PBO:0048534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8","termid":"PBO:0048534"}


id: PBO:0063012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 1","termid":"PBO:0063012"}


id: PBO:0013034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor (unnamed)","termid":"PBO:0013034"}


id: GO:0102930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + 4-hydroxybenzoic acid = 3-geranyl-4-hydroxybenzoate + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:27854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoate geranyltransferase activity","secondary_identifiers":["EC:2.5.1.93","MetaCyc:RXN-8920"],"termid":"GO:0102930"}


id: GO:0071403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high density lipoprotein particle stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to high density lipoprotein particle stimulus","secondary_identifiers":["GO:0055099"],"synonyms":[{"name":"cellular response to high-density lipoprotein particle stimulus","type":"exact"},{"name":"response to high density lipoprotein particle","type":"broad"},{"name":"response to high density lipoprotein particle stimulus","type":"broad"}],"termid":"GO:0071403"}


id: PBO:0017974
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HIS3","termid":"PBO:0017974"}


id: PBO:0050268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 46","termid":"PBO:0050268"}


id: PBO:0044888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPDC1 antisense RNA 1","termid":"PBO:0044888"}


id: GO:0022897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a peptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by proton movement.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete proton-dependent peptide secondary active transmembrane transporter activity (obsolete GO:0022897)","synonyms":[{"name":"hydrogen/oligopeptide symporter","type":"related"}],"termid":"GO:0022897"}


id: GO:0009040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-ureidoglycolate + NAD(P)+ = oxalureate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.154","PMID:23284870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ureidoglycolate dehydrogenase activity","secondary_identifiers":["MetaCyc:R165-RXN"],"synonyms":[{"name":"(S)-ureidoglycolate:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0009040"}


id: PBO:0089255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4452 family conserved fungal protein","termid":"PBO:0089255"}


id: PBO:0055979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 2","termid":"PBO:0055979"}


id: GO:0019904
data:
  {"annotated_genes":["SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033149"}]},"cv_name":"molecular_function","definition":"Binding to a specific domain of a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein domain specific binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"protein domain-specific binding","type":"exact"}],"termid":"GO:0019904","terms_by_termid":{"GO:0033149":null}}


id: PBO:0069533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 803, pseudogene","termid":"PBO:0069533"}


id: PBO:0017865
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli fbp","termid":"PBO:0017865"}


id: PR:000050485
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe) that has not been phosphorylated at the positions equivalent to Ser-199 and Ser-207 of the amino acid sequence represented by UniProtKB:O14188. Example: UniProtKB:O14188, Ser-199/Ser-207, PR:000026291.","definition_xrefs":["PRO:DAN","PMID:33131769","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe)","termid":"PR:000050483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rng2/UnPhos(S199,S207)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: Ras GTPase-activating-like protein rng2 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rng2/UnPhos:1","type":"exact"},{"name":"UniProtKB:O14188, Ser-199/Ser-207, PR:000026291","type":"narrow"},{"name":"rng2/UnPhos(S199,S207)","type":"exact"}],"termid":"PR:000050485"}


id: GO:0100034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates 4,6-pyruvylated galactose residue biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of 4,6-pyruvylated galactose residue biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100034)","termid":"GO:0100034"}


id: PBO:0081960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida glycoprotein AX, pseudogene","termid":"PBO:0081960"}


id: PBO:0113345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for 25S rRNA maturation and 60S ribosomal subunit assembly; localizes to the nucleolus and in foci along nuclear periphery; constituent of 66S pre-ribosomal particles; cooperates with Rrs1p and Mps3p to mediate telomere clustering by binding Sir4p, but is not involved in telomere tethering","termid":"PBO:0113345"}


id: PBO:0018036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTR family peptide transmembrane transporter Ptr2","termid":"PBO:0018036"}


id: PBO:0062898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxoeicosanoid receptor 1","termid":"PBO:0062898"}


id: GO:0090686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when glycine betaine has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:kmv","PMID:24212673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glycine betaine-activated nonselective monoatomic cation channel activity","synonyms":[{"name":"glycine betaine-activated nonselective monovalent cation channel activity","type":"related"}],"termid":"GO:0090686"}


id: MOD:01752
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cysTMT6plex-130 reporter+balance reagent cysteine disulfide","termid":"MOD:01827"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01752"}


id: PBO:0043900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC repeat containing interactor of PDZ3 domain","termid":"PBO:0043900"}


id: GO:0030942
data:
  {"annotated_genes":["SJAG_01282","SJAG_01759","SJAG_03684"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87654,111302,112110],"is_not":false,"summary":null,"term":"GO:0030942"}]},"cv_name":"molecular_function","definition":"Binding to an endoplasmic reticulum signal peptide, a specific peptide sequence that acts as a signal to localize the protein within the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005048","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"endoplasmic reticulum signal peptide binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER signal peptide binding","type":"exact"}],"termid":"GO:0030942","terms_by_termid":{"GO:0030942":null}}


id: FYPO:0008257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a greater extent than normal at long terminal repeat (LTR) regions.","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 acetylation during vegetative growth","termid":"FYPO:0004238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K4 acetylation at LTR during vegetative growth","termid":"FYPO:0008257"}


id: PBO:0074827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 23","termid":"PBO:0074827"}


id: PBO:0077899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase alpha/beta 1","termid":"PBO:0077899"}


id: PBO:0070357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 30","termid":"PBO:0070357"}


id: GO:2001158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of amine catabolic process","termid":"GO:0033243"},{"relation_name":"is_a","term_name":"positive regulation of glutamate metabolic process","termid":"GO:2000213"},{"relation_name":"is_a","term_name":"positive regulation of proline metabolic process","termid":"GO:2000216"},{"relation_name":"is_a","term_name":"regulation of proline catabolic process to glutamate","termid":"GO:2001156"},{"relation_name":"positively_regulates","term_name":"proline catabolic process to glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"positive regulation of proline catabolic process to glutamate","synonyms":[{"name":"positive regulation of proline breakdown to glutamate","type":"exact"},{"name":"positive regulation of proline degradation to glutamate","type":"exact"},{"name":"positive regulation of proline oxidation","type":"related"}],"termid":"GO:2001158"}


id: PBO:0031386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glucan_synthesis","termid":"PBO:0031386"}


id: PBO:0090582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 3, Pup3","termid":"PBO:0090582"}


id: PBO:0017718
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Kinesin Like protein","termid":"PBO:0017718"}


id: PBO:0060036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 24","termid":"PBO:0060036"}


id: GO:1990310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type-III dockerin domain of a protein. Type-III dockerin domain is the binding partner of type-III cohesin domain.","definition_xrefs":["PMID:24080387","GOC:mengo_curators","PMID:23195689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type-III dockerin domain binding","termid":"GO:1990310"}


id: PR:O14027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal 5'-phosphate synthase subunit PDX1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.04","synonyms":[{"name":"PLP synthase subunit PDX1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snz1","type":"exact"}],"termid":"PR:O14027"}


id: PBO:0108897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 10","termid":"PBO:0108897"}


id: PBO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase","termid":"PBO:0001668"}


id: GO:0001799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type IIb hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type II hypersensitivity","termid":"GO:0002892"},{"relation_name":"regulates","term_name":"type IIb hypersensitivity","termid":"GO:0001795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type IIb hypersensitivity","termid":"GO:0001799"}


